Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:51:06 (679076): wrapper (7.7.26015): starting
16:51:06 (679076): wrapper: running run_atlas (--nthreads 4)
[2025-10-29 16:51:06] Arguments: --nthreads 4
[2025-10-29 16:51:06] Threads: 4
[2025-10-29 16:51:06] Checking for CVMFS
[2025-10-29 16:51:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 16:51:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 16:51:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 16:51:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 16:51:06] 2.9.2.0 525847 387 69552 152269 2 57 32075443 36864000 0 130560 0 392296 99.992 14877 1354 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-29 16:51:06] CVMFS is ok
[2025-10-29 16:51:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 16:51:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-29 16:51:06] Further information can be found at the LHC@home message board.
[2025-10-29 16:51:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 16:51:06] Checking for apptainer binary...
[2025-10-29 16:51:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 16:51:06] Running /usr/bin/apptainer --version
[2025-10-29 16:51:06] apptainer version 1.4.1-1.1
[2025-10-29 16:51:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 16:51:07] atlasA139
[2025-10-29 16:51:07] apptainer works
[2025-10-29 16:51:07] Set ATHENA_PROC_NUMBER=4
[2025-10-29 16:51:07] Set ATHENA_CORE_NUMBER=4
[2025-10-29 16:51:07] Starting ATLAS job with PandaID=6864345887
[2025-10-29 16:51:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 17:53:34]  *** The last 200 lines of the pilot log: ***
[2025-10-29 17:53:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-29 17:53:34]  replicas=None
[2025-10-29 17:53:34]  scope=mc23_13p6TeV
[2025-10-29 17:53:34]  status=None
[2025-10-29 17:53:34]  status_code=0
[2025-10-29 17:53:34]  storage_token=
[2025-10-29 17:53:34]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6864345887/log.47081490._010446.job.log.tgz.1
[2025-10-29 17:53:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/4d/log.47081490._010446.job.log.tgz.1
[2025-10-29 17:53:34]  workdir=None
[2025-10-29 17:53:34] ]
[2025-10-29 17:53:34] 2025-10-29 16:52:55,255 | INFO     | transferring file log.47081490._010446.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6864345887/log.47081490._010446.job.log.tgz.1 to /local/data/boinc/
[2025-10-29 17:53:34] 2025-10-29 16:52:55,255 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6864345887/log.47081490._010446.job.log.tgz.1 /local/data/boinc/slots/0/log.47081490._0104
[2025-10-29 17:53:34] 2025-10-29 16:52:55,273 | INFO     | adding to output.list: log.47081490._010446.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/4d/log.47081490._010446.job.log.tg
[2025-10-29 17:53:34] 2025-10-29 16:52:55,273 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-29 17:53:34] 2025-10-29 16:52:55,273 | INFO     | summary of transferred files:
[2025-10-29 17:53:34] 2025-10-29 16:52:55,273 | INFO     |  -- lfn=log.47081490._010446.job.log.tgz.1, status_code=0, status=transferred
[2025-10-29 17:53:34] 2025-10-29 16:52:55,273 | INFO     | stage-out finished correctly
[2025-10-29 17:53:34] 2025-10-29 16:52:55,614 | INFO     | time since job start (3701s) is within the limit (172800.0s)
[2025-10-29 17:53:34] 2025-10-29 16:52:57,360 | INFO     | monitor loop #285: job 0:6864345887 is in state 'finished'
[2025-10-29 17:53:34] 2025-10-29 16:52:57,360 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 17:53:34] 2025-10-29 16:52:57,620 | INFO     | time since job start (3703s) is within the limit (172800.0s)
[2025-10-29 17:53:34] 2025-10-29 16:52:58,293 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-29 17:53:34] 2025-10-29 16:52:58,334 | INFO     | job 6864345887 has state=finished
[2025-10-29 17:53:34] 2025-10-29 16:52:58,334 | INFO     | preparing for final server update for job 6864345887 in state='finished'
[2025-10-29 17:53:34] 2025-10-29 16:52:58,334 | INFO     | this job has now completed (state=finished)
[2025-10-29 17:53:34] 2025-10-29 16:52:58,334 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-29 17:53:34] 2025-10-29 16:52:58,334 | INFO     | log transfer has been attempted: DONE
[2025-10-29 17:53:34] 2025-10-29 16:52:58,334 | INFO     | job 6864345887 has finished - writing final server update
[2025-10-29 17:53:34] 2025-10-29 16:52:58,335 | INFO     | total number of processed events: 400 (read)
[2025-10-29 17:53:34] 2025-10-29 16:52:58,335 | INFO     | executing command: lscpu
[2025-10-29 17:53:34] 2025-10-29 16:52:58,353 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-29 17:53:34] 2025-10-29 16:52:59,625 | INFO     | time since job start (3705s) is within the limit (172800.0s)
[2025-10-29 17:53:34] 2025-10-29 16:52:59,863 | INFO     | monitor loop #286: job 0:6864345887 is in state 'finished'
[2025-10-29 17:53:34] 2025-10-29 16:52:59,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 17:53:34] 2025-10-29 16:53:01,628 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-29 17:53:34] 2025-10-29 16:53:01,630 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3117.7839375
[2025-10-29 17:53:34] 2025-10-29 16:53:01,631 | INFO     | time since job start (3707s) is within the limit (172800.0s)
[2025-10-29 17:53:34] 2025-10-29 16:53:01,632 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6864345887/memory_monitor_summary.json (trf name=prmon)
[2025-10-29 17:53:34] 2025-10-29 16:53:01,632 | INFO     | extracted standard info from prmon json
[2025-10-29 17:53:34] 2025-10-29 16:53:01,632 | INFO     | extracted standard memory fields from prmon json
[2025-10-29 17:53:34] 2025-10-29 16:53:01,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-29 17:53:34] 2025-10-29 16:53:01,632 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-29 17:53:34] 2025-10-29 16:53:01,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-29 17:53:34] 2025-10-29 16:53:01,633 | INFO     | fitting pss+swap vs Time
[2025-10-29 17:53:34] 2025-10-29 16:53:01,633 | INFO     | sum of square deviations: 48810217.5
[2025-10-29 17:53:34] 2025-10-29 16:53:01,633 | INFO     | sum of deviations: -6866498976.999999
[2025-10-29 17:53:34] 2025-10-29 16:53:01,633 | INFO     | mean x: 1761755018.5
[2025-10-29 17:53:34] 2025-10-29 16:53:01,633 | INFO     | mean y: 2522216.5555555555
[2025-10-29 17:53:34] 2025-10-29 16:53:01,633 | INFO     | -- intersect: 247841799561.60864
[2025-10-29 17:53:34] 2025-10-29 16:53:01,633 | INFO     | intersect: 247841799561.60864
[2025-10-29 17:53:34] 2025-10-29 16:53:01,633 | INFO     | chi2: 0.07432098641847146
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | -- intersect: 247841799561.60864
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | current memory leak: -140.68 B/s (using 54 data points, chi2=0.07)
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | could have reported an average CPU frequency of 3391 MHz (6 samples)
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | ..............................
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | . Timing measurements:
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | . get job = 0 s
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | . initial setup = 1 s
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | . payload setup = 4 s
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | . stage-in = 0 s
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | . payload execution = 3676 s
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | . stage-out = 0 s
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | . log creation = 0 s
[2025-10-29 17:53:34] 2025-10-29 16:53:01,634 | INFO     | ..............................
[2025-10-29 17:53:34] 2025-10-29 16:53:01,988 | INFO     | 
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | job summary report
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | --------------------------------------------------
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | PanDA job id: 6864345887
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | task id: 47081490
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | errors: (none)
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | pilot state: finished 
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | transexitcode: 0
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | exeerrorcode: 0
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | exeerrordiag: 
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | exitcode: 0
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | exitmsg: OK
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | cpuconsumptiontime: 13800 s
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | nevents: 400
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | neventsw: 0
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | pid: 689438
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | pgrp: 689438
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | corecount: 4
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | event service: False
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | sizes: {0: 2348889, 4: 2349151, 11: 2349179, 3685: 2375043, 3687: 2384047, 3690: 2384103, 3693: 2384425}
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | --------------------------------------------------
[2025-10-29 17:53:34] 2025-10-29 16:53:01,989 | INFO     | 
[2025-10-29 17:53:34] 2025-10-29 16:53:01,990 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-29 17:53:34] 2025-10-29 16:53:02,008 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,008 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,008 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,008 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | job 6864345887 has completed (purged errors)
[2025-10-29 17:53:34] 2025-10-29 16:53:02,009 | INFO     | overall cleanup function is called
[2025-10-29 17:53:34] 2025-10-29 16:53:03,016 | INFO     | --- collectZombieJob: --- 10, [689438]
[2025-10-29 17:53:34] 2025-10-29 16:53:03,016 | INFO     | zombie collector waiting for pid 689438
[2025-10-29 17:53:34] 2025-10-29 16:53:03,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-29 17:53:34] 2025-10-29 16:53:03,016 | INFO     | collected zombie processes
[2025-10-29 17:53:34] 2025-10-29 16:53:03,016 | INFO     | will attempt to kill all subprocesses of pid=689438
[2025-10-29 17:53:34] 2025-10-29 16:53:03,064 | INFO     | process IDs to be killed: [689438] (in reverse order)
[2025-10-29 17:53:34] 2025-10-29 16:53:03,098 | WARNING  | found no corresponding commands to process id(s)
[2025-10-29 17:53:34] 2025-10-29 16:53:03,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-29 17:53:34] 2025-10-29 16:53:03,100 | INFO     | did not find any defunct processes belonging to 689438
[2025-10-29 17:53:34] 2025-10-29 16:53:03,101 | INFO     | did not find any defunct processes belonging to 689438
[2025-10-29 17:53:34] 2025-10-29 16:53:03,102 | INFO     | ready for new job
[2025-10-29 17:53:34] 2025-10-29 16:53:03,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-29 17:53:34] 2025-10-29 16:53:03,102 | INFO     | ***************************************
[2025-10-29 17:53:34] 2025-10-29 16:53:03,102 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-29 17:53:34] 2025-10-29 16:53:03,102 | INFO     | ***************************************
[2025-10-29 17:53:34] 2025-10-29 16:53:03,102 | INFO     | 
[2025-10-29 17:53:34] 2025-10-29 16:53:03,103 | INFO     | architecture information:
[2025-10-29 17:53:34] 2025-10-29 16:53:03,103 | INFO     | executing command: cat /etc/os-release
[2025-10-29 17:53:34] 2025-10-29 16:53:03,116 | INFO     | cat /etc/os-release:
[2025-10-29 17:53:34] NAME="CentOS Linux"
[2025-10-29 17:53:34] VERSION="7 (Core)"
[2025-10-29 17:53:34] ID="centos"
[2025-10-29 17:53:34] ID_LIKE="rhel fedora"
[2025-10-29 17:53:34] VERSION_ID="7"
[2025-10-29 17:53:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-29 17:53:34] ANSI_COLOR="0;31"
[2025-10-29 17:53:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-29 17:53:34] HOME_URL="https://www.centos.org/"
[2025-10-29 17:53:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-29 17:53:34] 
[2025-10-29 17:53:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-29 17:53:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-29 17:53:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-29 17:53:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-29 17:53:34] 
[2025-10-29 17:53:34] 2025-10-29 16:53:03,116 | INFO     | ***************************************
[2025-10-29 17:53:34] 2025-10-29 16:53:03,619 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-29 17:53:34] 2025-10-29 16:53:03,638 | INFO     | sufficient remaining disk space (328391983104 B)
[2025-10-29 17:53:34] 2025-10-29 16:53:03,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-29 17:53:34] 2025-10-29 16:53:03,638 | INFO     | current server update state: UPDATING_FINAL
[2025-10-29 17:53:34] 2025-10-29 16:53:03,638 | INFO     | update_server=False
[2025-10-29 17:53:34] 2025-10-29 16:53:03,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-29 17:53:34] 2025-10-29 16:53:03,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 17:53:34] 2025-10-29 16:53:03,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-29 17:53:34] 2025-10-29 16:53:03,638 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-29 17:53:34] 2025-10-29 16:53:03,639 | INFO     | aborting loop
[2025-10-29 17:53:34] 2025-10-29 16:53:03,873 | INFO     | all data control threads have been joined
[2025-10-29 17:53:34] 2025-10-29 16:53:03,902 | INFO     | all payload control threads have been joined
[2025-10-29 17:53:34] 2025-10-29 16:53:04,309 | INFO     | all job control threads have been joined
[2025-10-29 17:53:34] 2025-10-29 16:53:04,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 17:53:34] 2025-10-29 16:53:04,644 | INFO     | [job] retrieve thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:04,644 | INFO     | [job] queue monitor thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:04,644 | INFO     | [job] job monitor thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:04,695 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:04,755 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:04,876 | INFO     | [data] control thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:04,908 | INFO     | [payload] control thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:05,103 | INFO     | [data] copytool_in thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:05,205 | INFO     | [payload] failed_post thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:05,315 | INFO     | [job] control thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:05,642 | INFO     | [data] copytool_out thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:05,722 | INFO     | [payload] validate_post thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:06,050 | INFO     | [job] validate thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:06,144 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:08,349 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:14,163 | INFO     | job.realtimelogging is not enabled
[2025-10-29 17:53:34] 2025-10-29 16:53:15,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 17:53:34] 2025-10-29 16:53:18,788 | INFO     | [monitor] cgroup control has ended
[2025-10-29 17:53:34] 2025-10-29 16:53:19,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140356272318272)>', '<ExcThread(monitor, started 140355034937088)>']
[2025-10-29 17:53:34] 2025-10-29 16:53:24,812 | INFO     | all workflow threads have been joined
[2025-10-29 17:53:34] 2025-10-29 16:53:24,813 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 17:53:34] 2025-10-29 16:53:24,813 | INFO     | traces error code: 0
[2025-10-29 17:53:34] 2025-10-29 16:53:24,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 17:53:34] 2025-10-29 16:53:34,764 | INFO     | PID=682866 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-29 17:53:34] 2025-10-29 16:53:34,764 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 17:53:34] 2025-10-29 16:53:34,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 17:53:34] 2025-10-29 16:53:34,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 17:53:34] 2025-10-29 16:53:34,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 17:53:34] 2025-10-29 16:53:34,764 | CRITICAL | thread 'MainThread' is not alive
[2025-10-29 17:53:34] 2025-10-29 16:53:34,764 | INFO     | [monitor] control thread has ended
[2025-10-29 17:53:34] 2025-10-29 16:53:34,830 [wrapper] ==== pilot stdout END ====
[2025-10-29 17:53:34] 2025-10-29 16:53:34,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 17:53:34] 2025-10-29 16:53:34,838 [wrapper] pilotpid: 682866
[2025-10-29 17:53:34] 2025-10-29 16:53:34,842 [wrapper] Pilot exit status: 0
[2025-10-29 17:53:34] 2025-10-29 16:53:34,853 [wrapper] pandaids: 6864345887
[2025-10-29 17:53:34] 2025-10-29 16:53:34,875 [wrapper] cleanup supervisor_pilot  699101 682867
[2025-10-29 17:53:34] 2025-10-29 16:53:34,879 [wrapper] Test setup, not cleaning
[2025-10-29 17:53:34] 2025-10-29 16:53:34,882 [wrapper] apfmon messages muted
[2025-10-29 17:53:34] 2025-10-29 16:53:34,886 [wrapper] ==== wrapper stdout END ====
[2025-10-29 17:53:34] 2025-10-29 16:53:34,889 [wrapper] ==== wrapper stderr END ====
[2025-10-29 17:53:34]  *** Error codes and diagnostics ***
[2025-10-29 17:53:34]     "exeErrorCode": 0,
[2025-10-29 17:53:34]     "exeErrorDiag": "",
[2025-10-29 17:53:34]     "pilotErrorCode": 0,
[2025-10-29 17:53:34]     "pilotErrorDiag": "",
[2025-10-29 17:53:34]  *** Listing of results directory ***
[2025-10-29 17:53:34] total 388880
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc    557409 Oct 29 07:58 pilot3.tar.gz
[2025-10-29 17:53:34] -rwx------ 1 boinc boinc     36292 Oct 29 08:27 runpilot2-wrapper.sh
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc      5112 Oct 29 08:27 queuedata.json
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc       100 Oct 29 16:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 17:53:34] -rwxr-xr-x 1 boinc boinc      7986 Oct 29 16:51 run_atlas
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc       105 Oct 29 16:51 job.xml
[2025-10-29 17:53:34] -rw-r--r-- 2 boinc boinc 217615317 Oct 29 16:51 EVNT.47081487._000408.pool.root.1
[2025-10-29 17:53:34] -rw-r--r-- 2 boinc boinc    569676 Oct 29 16:51 input.tar.gz
[2025-10-29 17:53:34] -rw-r--r-- 2 boinc boinc     15120 Oct 29 16:51 start_atlas.sh
[2025-10-29 17:53:34] drwxrwx--x 2 boinc boinc      4096 Oct 29 16:51 shared
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc         0 Oct 29 16:51 boinc_setup_complete
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc      6373 Oct 29 16:51 init_data.xml
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc         0 Oct 29 16:51 boinc_lockfile
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc      2526 Oct 29 16:51 pandaJob.out
[2025-10-29 17:53:34] -rw------- 1 boinc boinc    982802 Oct 29 16:51 agis_schedconf.cvmfs.json
[2025-10-29 17:53:34] -rw------- 1 boinc boinc   1560632 Oct 29 16:51 agis_ddmendpoints.agis.ALL.json
[2025-10-29 17:53:34] drwx------ 5 boinc boinc      4096 Oct 29 16:51 pilot3
[2025-10-29 17:53:34] -rw------- 1 boinc boinc 175053622 Oct 29 17:52 HITS.47081490._010446.pool.root.1
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc       530 Oct 29 17:52 boinc_task_state.xml
[2025-10-29 17:53:34] -rw------- 1 boinc boinc      1016 Oct 29 17:52 memory_monitor_summary.json
[2025-10-29 17:53:34] -rw------- 1 boinc boinc    260539 Oct 29 17:52 log.47081490._010446.job.log.tgz.1
[2025-10-29 17:53:34] -rw------- 1 boinc boinc      7768 Oct 29 17:53 heartbeat.json
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc      8192 Oct 29 17:53 boinc_mmap_file
[2025-10-29 17:53:34] -rw------- 1 boinc boinc       816 Oct 29 17:53 pilotlog.txt
[2025-10-29 17:53:34] -rw------- 1 boinc boinc        95 Oct 29 17:53 pilot_heartbeat.json
[2025-10-29 17:53:34] -rw------- 1 boinc boinc    557356 Oct 29 17:53 log.47081490._010446.job.log.1
[2025-10-29 17:53:34] -rw------- 1 boinc boinc       357 Oct 29 17:53 output.list
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc       620 Oct 29 17:53 runtime_log
[2025-10-29 17:53:34] -rw------- 1 boinc boinc    839680 Oct 29 17:53 result.tar.gz
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc        27 Oct 29 17:53 wrapper_checkpoint.txt
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc      8792 Oct 29 17:53 runtime_log.err
[2025-10-29 17:53:34] -rw------- 1 boinc boinc       661 Oct 29 17:53 dj8LDmmlFY8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmNGODmuuSWzn.diag
[2025-10-29 17:53:34] -rw-r--r-- 1 boinc boinc     21799 Oct 29 17:53 stderr.txt
[2025-10-29 17:53:34] HITS file was successfully produced:
[2025-10-29 17:53:34] -rw------- 1 boinc boinc 175053622 Oct 29 17:52 shared/HITS.pool.root.1
[2025-10-29 17:53:34]  *** Contents of shared directory: ***
[2025-10-29 17:53:34] total 384872
[2025-10-29 17:53:34] -rw-r--r-- 2 boinc boinc 217615317 Oct 29 16:51 ATLAS.root_0
[2025-10-29 17:53:34] -rw-r--r-- 2 boinc boinc    569676 Oct 29 16:51 input.tar.gz
[2025-10-29 17:53:34] -rw-r--r-- 2 boinc boinc     15120 Oct 29 16:51 start_atlas.sh
[2025-10-29 17:53:34] -rw------- 1 boinc boinc 175053622 Oct 29 17:52 HITS.pool.root.1
[2025-10-29 17:53:34] -rw------- 1 boinc boinc    839680 Oct 29 17:53 result.tar.gz
17:53:36 (679076): run_atlas exited; CPU time 13810.771367
17:53:36 (679076): called boinc_finish(0)

</stderr_txt>
]]>

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