Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-29 09:17:10 (21996): vboxwrapper version 26210
2025-10-29 09:17:10 (21996): BOINC client version: 8.0.2
2025-10-29 09:17:14 (21996): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-10-29 09:17:14 (21996): Successfully copied 'init_data.xml' to the shared directory.
2025-10-29 09:17:14 (21996): Create VM. (boinc_e4d5aa2d0b1cb365, slot#0)
2025-10-29 09:17:16 (21996): Setting Memory Size for VM. (4100MB)
2025-10-29 09:17:17 (21996): Setting CPU Count for VM. (1)
2025-10-29 09:17:18 (21996): Setting Chipset Options for VM.
2025-10-29 09:17:19 (21996): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-29 09:17:19 (21996): Setting Boot Options for VM.
2025-10-29 09:17:20 (21996): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-29 09:17:20 (21996): Enabling VM Network Access.
2025-10-29 09:17:21 (21996): Disabling USB Support for VM.
2025-10-29 09:17:21 (21996): Disabling COM Port Support for VM.
2025-10-29 09:17:21 (21996): Disabling LPT Port Support for VM.
2025-10-29 09:17:22 (21996): Disabling Audio Support for VM.
2025-10-29 09:17:22 (21996): Disabling Clipboard Support for VM.
2025-10-29 09:17:22 (21996): Disabling Drag and Drop Support for VM.
2025-10-29 09:17:23 (21996): Adding storage controller(s) to VM.
2025-10-29 09:17:23 (21996): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-29 09:17:25 (21996): Adding VirtualBox Guest Additions to VM.
2025-10-29 09:17:25 (21996): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-29 09:17:26 (21996): forwarding host port 60536 to guest port 80
2025-10-29 09:17:26 (21996): Enabling remote desktop for VM.
2025-10-29 09:17:27 (21996): Required extension pack not installed, remote desktop not enabled.
2025-10-29 09:17:27 (21996): Enabling shared directory for VM.
2025-10-29 09:17:27 (21996): Starting VM using VBoxManage interface. (boinc_e4d5aa2d0b1cb365, slot#0)
2025-10-29 09:17:34 (21996): Successfully started VM. (PID = '21336')
2025-10-29 09:17:34 (21996): Reporting VM Process ID to BOINC.
2025-10-29 09:17:34 (21996): Guest Log: BIOS: VirtualBox 6.1.12
2025-10-29 09:17:34 (21996): Guest Log: CPUID EDX: 0x178bfbff
2025-10-29 09:17:34 (21996): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-29 09:17:34 (21996): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-29 09:17:34 (21996): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-29 09:17:34 (21996): Detected: Web Application Enabled (http://localhost:60536)
2025-10-29 09:17:34 (21996): Preference change detected
2025-10-29 09:17:34 (21996): Setting CPU throttle for VM. (100%)
2025-10-29 09:17:35 (21996): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-29 09:17:36 (21996): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-29 09:17:36 (21996): Guest Log: BIOS: Booting from Hard Disk...
2025-10-29 09:18:03 (21996): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-29 09:18:03 (21996): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-29 09:18:03 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-29 09:18:03 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-29 09:18:03 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-29 09:18:03 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-29 09:18:03 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-29 09:18:03 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-29 09:18:03 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-29 09:18:03 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-29 09:18:03 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-29 09:18:03 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-29 09:18:04 (21996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-29 09:18:18 (21996): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-29 09:18:18 (21996): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-29 09:18:58 (21996): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-29 09:18:58 (21996): Guest Log: 00:00:00.002147 main     Log opened 2025-10-29T09:18:56.763595000Z
2025-10-29 09:18:58 (21996): Guest Log: 00:00:00.002700 main     OS Product: Linux
2025-10-29 09:18:58 (21996): Guest Log: 00:00:00.002815 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-29 09:18:58 (21996): Guest Log: 00:00:00.002889 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-29 09:18:58 (21996): Guest Log: 00:00:00.002985 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-29 09:18:58 (21996): Guest Log: 00:00:00.002986 main     Process ID: 1238
2025-10-29 09:18:58 (21996): Guest Log: 00:00:00.002986 main     Package type: LINUX_64BITS_GENERIC
2025-10-29 09:18:58 (21996): Guest Log: 00:00:00.005740 main     5.2.32 r132073 started. Verbose level = 0
2025-10-29 09:18:59 (21996): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-29 09:18:59 (21996): Guest Log: [INFO] Mounting shared directory
2025-10-29 09:19:01 (21996): Guest Log: [INFO] Checking for init_data.xml
2025-10-29 09:19:08 (21996): Guest Log: 00:00:10.080018 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 008 037 000ns (GuestNow=1 761 743 947 847 025 000 ns GuestLast=1 761 729 536 838 988 000 ns fSetTimeLastLoop=true )
2025-10-29 09:19:23 (21996): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-29 09:19:23 (21996): Guest Log: [INFO] Detected branch: prod
2025-10-29 09:19:24 (21996): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-29 09:19:24 (21996): Guest Log: Copying input files
2025-10-29 09:19:27 (21996): Guest Log: Copied input files into RunAtlas.
2025-10-29 09:19:28 (21996): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-29 09:19:28 (21996): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-29 09:19:28 (21996): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-29 09:19:28 (21996): Guest Log: Further information can be found at the LHC@home message board.
2025-10-29 09:19:50 (21996): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-29 09:19:52 (21996): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-29 09:19:52 (21996): Guest Log: 2.6.3.0 1533 0 30052 152266 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-29 09:19:58 (21996): Guest Log: copied the webapp to /var/www
2025-10-29 09:19:58 (21996): Guest Log: core_number=1
2025-10-29 09:19:58 (21996): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-29 09:19:58 (21996): Guest Log:  *** Starting ATLAS job. (PandaID=6864711779 taskID=47081490) ***
2025-10-29 09:35:32 (21996): Guest Log:  *** Job finished ***
2025-10-29 09:35:32 (21996): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:17,686 | INFO     | all workflow threads have been joined
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:17,687 | INFO     | end of generic workflow (traces error code: 0)
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:17,690 | INFO     | traces error code: 0
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:17,692 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:29,504 | INFO     | PID=5895 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:29,507 | INFO     | found 0 job(s) in 20 queues
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:29,508 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:29,508 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:29,508 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:29,508 | INFO     | [monitor] control thread has ended
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:29,874 [wrapper] ==== pilot stdout END ====
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:29,903 [wrapper] ==== wrapper stdout RESUME ====
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:29,930 [wrapper] pilotpid: 5895
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:29,964 [wrapper] Pilot exit status: 0
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:30,121 [wrapper] pandaids: 6864711779
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:30,245 [wrapper] cleanup supervisor_pilot  5901 5896
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:30,276 [wrapper] Test setup, not cleaning
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:30,305 [wrapper] apfmon messages muted
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:30,333 [wrapper] ==== wrapper stdout END ====
2025-10-29 09:35:32 (21996): Guest Log: 2025-10-29 13:35:30,362 [wrapper] ==== wrapper stderr END ====
2025-10-29 09:35:32 (21996): Guest Log:  *** Error codes and diagnostics ***
2025-10-29 09:35:32 (21996): Guest Log:     "exeErrorCode": 65,
2025-10-29 09:35:32 (21996): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-29 09:35:32 (21996): Guest Log:     "pilotErrorCode": 1305,
2025-10-29 09:35:32 (21996): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-29 09:35:32 (21996): Guest Log:  *** Listing of results directory ***
2025-10-29 09:35:32 (21996): Guest Log: total 4168
2025-10-29 09:35:32 (21996): Guest Log: -rw-r--r--. 1 atlas atlas  557409 Oct 29 12:14 pilot3.tar.gz
2025-10-29 09:35:32 (21996): Guest Log: -rwx------. 1 atlas atlas   36292 Oct 29 12:16 runpilot2-wrapper.sh
2025-10-29 09:35:32 (21996): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct 29 12:16 queuedata.json
2025-10-29 09:35:32 (21996): Guest Log: -rwxr-xr-x. 1 atlas atlas    6063 Oct 29 13:19 init_data.xml
2025-10-29 09:35:32 (21996): Guest Log: -rwxr-xr-x. 1 atlas atlas  569673 Oct 29 13:19 input.tar.gz
2025-10-29 09:35:32 (21996): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Oct 29 13:19 start_atlas.sh
2025-10-29 09:35:32 (21996): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 29 13:19 EVNT.47081487._000543.pool.root.1 -> /data/./ATLAS.root_0
2025-10-29 09:35:32 (21996): Guest Log: -rw-r--r--. 1 atlas atlas    2527 Oct 29 13:19 pandaJob.out
2025-10-29 09:35:32 (21996): Guest Log: -rw-------. 1 atlas atlas  982988 Oct 29 13:22 agis_schedconf.cvmfs.json
2025-10-29 09:35:32 (21996): Guest Log: -rw-------. 1 atlas atlas 1560632 Oct 29 13:22 agis_ddmendpoints.agis.ALL.json
2025-10-29 09:35:32 (21996): Guest Log: drwx------. 5 atlas atlas    4096 Oct 29 13:22 pilot3
2025-10-29 09:35:32 (21996): Guest Log: -rw-------. 1 atlas atlas   50561 Oct 29 13:32 log.47081490._013588.job.log.tgz.1
2025-10-29 09:35:32 (21996): Guest Log: -rw-------. 1 atlas atlas    8206 Oct 29 13:34 heartbeat.json
2025-10-29 09:35:32 (21996): Guest Log: -rw-------. 1 atlas atlas     744 Oct 29 13:35 pilotlog.txt
2025-10-29 09:35:32 (21996): Guest Log: -rw-------. 1 atlas atlas      95 Oct 29 13:35 pilot_heartbeat.json
2025-10-29 09:35:32 (21996): Guest Log: -rw-------. 1 atlas atlas  168762 Oct 29 13:35 log.47081490._013588.job.log.1
2025-10-29 09:35:32 (21996): Guest Log: -rw-------. 1 atlas atlas     188 Oct 29 13:35 output.list
2025-10-29 09:35:32 (21996): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct 29 13:35 runtime_log
2025-10-29 09:35:32 (21996): Guest Log: -rw-------. 1 atlas atlas  235520 Oct 29 13:35 result.tar.gz
2025-10-29 09:35:32 (21996): Guest Log: -rw-r--r--. 1 atlas atlas    8380 Oct 29 13:35 runtime_log.err
2025-10-29 09:35:32 (21996): Guest Log: -rw-------. 1 atlas atlas     650 Oct 29 13:35 fOPNDmPHKY8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmwGODmSFnk0m.diag
2025-10-29 09:35:32 (21996): Guest Log: Looking for outputfile HITS.47081490._013588.pool.root.1
2025-10-29 09:35:32 (21996): Guest Log: No HITS file was produced
2025-10-29 09:35:32 (21996): Guest Log: Successfully finished the ATLAS job!
2025-10-29 09:35:32 (21996): Guest Log: Copying the results back to the shared directory!
2025-10-29 09:35:33 (21996): Guest Log:  *** Contents of shared directory: ***
2025-10-29 09:35:33 (21996): Guest Log: total 209808
2025-10-29 09:35:33 (21996): Guest Log: -rwxrwxrwx. 1 root root 214004081 Oct 29 13:17 ATLAS.root_0
2025-10-29 09:35:33 (21996): Guest Log: -rwxrwxrwx. 1 root root      6063 Oct 29 13:17 init_data.xml
2025-10-29 09:35:33 (21996): Guest Log: -rwxrwxrwx. 1 root root    569673 Oct 29 12:20 input.tar.gz
2025-10-29 09:35:33 (21996): Guest Log: -rwxrwxrwx. 1 root root    235520 Oct 29 13:35 result.tar.gz
2025-10-29 09:35:33 (21996): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 29 12:20 start_atlas.sh
2025-10-29 09:35:33 (21996): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-29 09:35:33 (21996): VM Completion File Detected.
2025-10-29 09:35:33 (21996): Powering off VM.
2025-10-29 09:35:34 (21996): Successfully stopped VM.
2025-10-29 09:35:34 (21996): Deregistering VM. (boinc_e4d5aa2d0b1cb365, slot#0)
2025-10-29 09:35:35 (21996): Removing network bandwidth throttle group from VM.
2025-10-29 09:35:35 (21996): Removing VM from VirtualBox.
2025-10-29 09:35:40 (21996): called boinc_finish(0)

</stderr_txt>
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