Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:39:25 (26366): wrapper (7.7.26015): starting
06:39:25 (26366): wrapper: running run_atlas (--nthreads 12)
[2025-10-29 06:39:25] Arguments: --nthreads 12
[2025-10-29 06:39:25] Threads: 12
[2025-10-29 06:39:25] Checking for CVMFS
[2025-10-29 06:39:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 06:39:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 06:39:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 06:39:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 06:39:25] 2.11.2.0 723 77200 85488 152261 2 59 18557311 20275200 1 130560 0 43709868 99.967 3222309 35111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-29 06:39:25] CVMFS is ok
[2025-10-29 06:39:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 06:39:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-29 06:39:25] Further information can be found at the LHC@home message board.
[2025-10-29 06:39:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 06:39:25] Checking for apptainer binary...
[2025-10-29 06:39:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 06:39:25] Running /usr/bin/apptainer --version
[2025-10-29 06:39:25] apptainer version 1.3.2-1.el7
[2025-10-29 06:39:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 06:39:27] c-205-1.aglt2.org
[2025-10-29 06:39:27] apptainer works
[2025-10-29 06:39:27] Set ATHENA_PROC_NUMBER=12
[2025-10-29 06:39:27] Set ATHENA_CORE_NUMBER=12
[2025-10-29 06:39:27] Starting ATLAS job with PandaID=6864341021
[2025-10-29 06:39:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 07:45:54]  *** The last 200 lines of the pilot log: ***
[2025-10-29 07:45:54]  scope=mc23_13p6TeV
[2025-10-29 07:45:54]  status=None
[2025-10-29 07:45:54]  status_code=0
[2025-10-29 07:45:54]  storage_token=
[2025-10-29 07:45:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6864341021/log.47081490._008658.job.log.tgz.1
[2025-10-29 07:45:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/cf/log.47081490._008658.job.log.tgz.1
[2025-10-29 07:45:54]  workdir=None
[2025-10-29 07:45:54] ]
[2025-10-29 07:45:54] 2025-10-29 11:44:39,505 | INFO     | transferring file log.47081490._008658.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6864341021/log.47081490._008658.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-29 07:45:54] 2025-10-29 11:44:39,506 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6864341021/log.47081490._008658.job.log.tgz.1 /tmp/boinchome/slots/0/log.47081490._008658.job
[2025-10-29 07:45:54] 2025-10-29 11:44:39,528 | INFO     | adding to output.list: log.47081490._008658.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/cf/log.47081490._008658.job.log.tg
[2025-10-29 07:45:54] 2025-10-29 11:44:39,529 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-29 07:45:54] 2025-10-29 11:44:39,529 | INFO     | summary of transferred files:
[2025-10-29 07:45:54] 2025-10-29 11:44:39,529 | INFO     |  -- lfn=log.47081490._008658.job.log.tgz.1, status_code=0, status=transferred
[2025-10-29 07:45:54] 2025-10-29 11:44:39,530 | INFO     | stage-out finished correctly
[2025-10-29 07:45:54] 2025-10-29 11:44:40,608 | INFO     | time since job start (3898s) is within the limit (172800.0s)
[2025-10-29 07:45:54] 2025-10-29 11:44:40,987 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-29 07:45:54] 2025-10-29 11:44:41,721 | INFO     | monitor loop #293: job 0:6864341021 is in state 'finished'
[2025-10-29 07:45:54] 2025-10-29 11:44:41,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 07:45:54] 2025-10-29 11:44:42,613 | INFO     | time since job start (3900s) is within the limit (172800.0s)
[2025-10-29 07:45:54] 2025-10-29 11:44:43,441 | INFO     | job 6864341021 has state=finished
[2025-10-29 07:45:54] 2025-10-29 11:44:43,442 | INFO     | preparing for final server update for job 6864341021 in state='finished'
[2025-10-29 07:45:54] 2025-10-29 11:44:43,442 | INFO     | this job has now completed (state=finished)
[2025-10-29 07:45:54] 2025-10-29 11:44:43,443 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-29 07:45:54] 2025-10-29 11:44:43,443 | INFO     | log transfer has been attempted: DONE
[2025-10-29 07:45:54] 2025-10-29 11:44:43,443 | INFO     | job 6864341021 has finished - writing final server update
[2025-10-29 07:45:54] 2025-10-29 11:44:43,443 | INFO     | total number of processed events: 400 (read)
[2025-10-29 07:45:54] 2025-10-29 11:44:43,444 | INFO     | executing command: lscpu
[2025-10-29 07:45:54] 2025-10-29 11:44:43,470 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-29 07:45:54] 2025-10-29 11:44:44,224 | INFO     | monitor loop #294: job 0:6864341021 is in state 'finished'
[2025-10-29 07:45:54] 2025-10-29 11:44:44,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 07:45:54] 2025-10-29 11:44:44,619 | INFO     | time since job start (3902s) is within the limit (172800.0s)
[2025-10-29 07:45:54] 2025-10-29 11:44:45,739 | INFO     | PID=30140 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-29 07:45:54] 2025-10-29 11:44:46,727 | INFO     | monitor loop #295: job 0:6864341021 is in state 'finished'
[2025-10-29 07:45:54] 2025-10-29 11:44:46,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 07:45:54] 2025-10-29 11:44:46,740 | INFO     | time since job start (3904s) is within the limit (172800.0s)
[2025-10-29 07:45:54] 2025-10-29 11:44:48,142 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-29 07:45:54] 2025-10-29 11:44:48,146 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-29 07:45:54] 2025-10-29 11:44:48,148 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6864341021/memory_monitor_summary.json (trf name=prmon)
[2025-10-29 07:45:54] 2025-10-29 11:44:48,149 | INFO     | extracted standard info from prmon json
[2025-10-29 07:45:54] 2025-10-29 11:44:48,149 | INFO     | extracted standard memory fields from prmon json
[2025-10-29 07:45:54] 2025-10-29 11:44:48,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-29 07:45:54] 2025-10-29 11:44:48,149 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-29 07:45:54] 2025-10-29 11:44:48,149 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-29 07:45:54] 2025-10-29 11:44:48,151 | INFO     | fitting pss+swap vs Time
[2025-10-29 07:45:54] 2025-10-29 11:44:48,151 | INFO     | sum of square deviations: 57407588.0
[2025-10-29 07:45:54] 2025-10-29 11:44:48,151 | INFO     | sum of deviations: -6507926763.999999
[2025-10-29 07:45:54] 2025-10-29 11:44:48,151 | INFO     | mean x: 1761736424.0
[2025-10-29 07:45:54] 2025-10-29 11:44:48,151 | INFO     | mean y: 2781243.245614035
[2025-10-29 07:45:54] 2025-10-29 11:44:48,151 | INFO     | -- intersect: 199719439341.8797
[2025-10-29 07:45:54] 2025-10-29 11:44:48,152 | INFO     | intersect: 199719439341.8797
[2025-10-29 07:45:54] 2025-10-29 11:44:48,152 | INFO     | chi2: 0.04479515606381852
[2025-10-29 07:45:54] 2025-10-29 11:44:48,152 | INFO     | -- intersect: 199719439341.8797
[2025-10-29 07:45:54] 2025-10-29 11:44:48,152 | INFO     | current memory leak: -113.36 B/s (using 57 data points, chi2=0.04)
[2025-10-29 07:45:54] 2025-10-29 11:44:48,152 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-10-29 07:45:54] 2025-10-29 11:44:48,152 | INFO     | ..............................
[2025-10-29 07:45:54] 2025-10-29 11:44:48,153 | INFO     | . Timing measurements:
[2025-10-29 07:45:54] 2025-10-29 11:44:48,153 | INFO     | . get job = 0 s
[2025-10-29 07:45:54] 2025-10-29 11:44:48,153 | INFO     | . initial setup = 2 s
[2025-10-29 07:45:54] 2025-10-29 11:44:48,153 | INFO     | . payload setup = 7 s
[2025-10-29 07:45:54] 2025-10-29 11:44:48,153 | INFO     | . stage-in = 0 s
[2025-10-29 07:45:54] 2025-10-29 11:44:48,153 | INFO     | . payload execution = 3869 s
[2025-10-29 07:45:54] 2025-10-29 11:44:48,153 | INFO     | . stage-out = 0 s
[2025-10-29 07:45:54] 2025-10-29 11:44:48,153 | INFO     | . log creation = 0 s
[2025-10-29 07:45:54] 2025-10-29 11:44:48,153 | INFO     | ..............................
[2025-10-29 07:45:54] 2025-10-29 11:44:48,237 | INFO     | 
[2025-10-29 07:45:54] 2025-10-29 11:44:48,238 | INFO     | job summary report
[2025-10-29 07:45:54] 2025-10-29 11:44:48,238 | INFO     | --------------------------------------------------
[2025-10-29 07:45:54] 2025-10-29 11:44:48,238 | INFO     | PanDA job id: 6864341021
[2025-10-29 07:45:54] 2025-10-29 11:44:48,238 | INFO     | task id: 47081490
[2025-10-29 07:45:54] 2025-10-29 11:44:48,238 | INFO     | errors: (none)
[2025-10-29 07:45:54] 2025-10-29 11:44:48,238 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-29 07:45:54] 2025-10-29 11:44:48,238 | INFO     | pilot state: finished 
[2025-10-29 07:45:54] 2025-10-29 11:44:48,239 | INFO     | transexitcode: 0
[2025-10-29 07:45:54] 2025-10-29 11:44:48,239 | INFO     | exeerrorcode: 0
[2025-10-29 07:45:54] 2025-10-29 11:44:48,239 | INFO     | exeerrordiag: 
[2025-10-29 07:45:54] 2025-10-29 11:44:48,239 | INFO     | exitcode: 0
[2025-10-29 07:45:54] 2025-10-29 11:44:48,239 | INFO     | exitmsg: OK
[2025-10-29 07:45:54] 2025-10-29 11:44:48,239 | INFO     | cpuconsumptiontime: 41571 s
[2025-10-29 07:45:54] 2025-10-29 11:44:48,240 | INFO     | nevents: 400
[2025-10-29 07:45:54] 2025-10-29 11:44:48,240 | INFO     | neventsw: 0
[2025-10-29 07:45:54] 2025-10-29 11:44:48,240 | INFO     | pid: 4445
[2025-10-29 07:45:54] 2025-10-29 11:44:48,240 | INFO     | pgrp: 4445
[2025-10-29 07:45:54] 2025-10-29 11:44:48,240 | INFO     | corecount: 12
[2025-10-29 07:45:54] 2025-10-29 11:44:48,240 | INFO     | event service: False
[2025-10-29 07:45:54] 2025-10-29 11:44:48,241 | INFO     | sizes: {0: 2348882, 5: 2349144, 11: 2349200, 3880: 2375003, 3881: 2384001, 3882: 2384057, 3889: 2384379}
[2025-10-29 07:45:54] 2025-10-29 11:44:48,241 | INFO     | --------------------------------------------------
[2025-10-29 07:45:54] 2025-10-29 11:44:48,241 | INFO     | 
[2025-10-29 07:45:54] 2025-10-29 11:44:48,241 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-29 07:45:54] 2025-10-29 11:44:48,265 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,266 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,266 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,268 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-29 07:45:54] 2025-10-29 11:44:48,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,269 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-29 07:45:54] 2025-10-29 11:44:48,269 | INFO     | job 6864341021 has completed (purged errors)
[2025-10-29 07:45:54] 2025-10-29 11:44:48,269 | INFO     | overall cleanup function is called
[2025-10-29 07:45:54] 2025-10-29 11:44:49,277 | INFO     | --- collectZombieJob: --- 10, [4445]
[2025-10-29 07:45:54] 2025-10-29 11:44:49,277 | INFO     | zombie collector waiting for pid 4445
[2025-10-29 07:45:54] 2025-10-29 11:44:49,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-29 07:45:54] 2025-10-29 11:44:49,278 | INFO     | collected zombie processes
[2025-10-29 07:45:54] 2025-10-29 11:44:49,278 | INFO     | will attempt to kill all subprocesses of pid=4445
[2025-10-29 07:45:54] 2025-10-29 11:44:49,371 | INFO     | process IDs to be killed: [4445] (in reverse order)
[2025-10-29 07:45:54] 2025-10-29 11:44:49,421 | WARNING  | found no corresponding commands to process id(s)
[2025-10-29 07:45:54] 2025-10-29 11:44:49,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-29 07:45:54] 2025-10-29 11:44:49,425 | INFO     | did not find any defunct processes belonging to 4445
[2025-10-29 07:45:54] 2025-10-29 11:44:49,428 | INFO     | did not find any defunct processes belonging to 4445
[2025-10-29 07:45:54] 2025-10-29 11:44:49,428 | INFO     | ready for new job
[2025-10-29 07:45:54] 2025-10-29 11:44:49,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-29 07:45:54] 2025-10-29 11:44:49,429 | INFO     | ***************************************
[2025-10-29 07:45:54] 2025-10-29 11:44:49,429 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-29 07:45:54] 2025-10-29 11:44:49,429 | INFO     | ***************************************
[2025-10-29 07:45:54] 2025-10-29 11:44:49,429 | INFO     | 
[2025-10-29 07:45:54] 2025-10-29 11:44:49,430 | INFO     | architecture information:
[2025-10-29 07:45:54] 2025-10-29 11:44:49,430 | INFO     | executing command: cat /etc/os-release
[2025-10-29 07:45:54] 2025-10-29 11:44:49,444 | INFO     | cat /etc/os-release:
[2025-10-29 07:45:54] NAME="CentOS Linux"
[2025-10-29 07:45:54] VERSION="7 (Core)"
[2025-10-29 07:45:54] ID="centos"
[2025-10-29 07:45:54] ID_LIKE="rhel fedora"
[2025-10-29 07:45:54] VERSION_ID="7"
[2025-10-29 07:45:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-29 07:45:54] ANSI_COLOR="0;31"
[2025-10-29 07:45:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-29 07:45:54] HOME_URL="https://www.centos.org/"
[2025-10-29 07:45:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-29 07:45:54] 
[2025-10-29 07:45:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-29 07:45:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-29 07:45:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-29 07:45:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-29 07:45:54] 
[2025-10-29 07:45:54] 2025-10-29 11:44:49,445 | INFO     | ***************************************
[2025-10-29 07:45:54] 2025-10-29 11:44:49,948 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-29 07:45:54] 2025-10-29 11:44:49,964 | INFO     | sufficient remaining disk space (29507977216 B)
[2025-10-29 07:45:54] 2025-10-29 11:44:49,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-29 07:45:54] 2025-10-29 11:44:49,964 | INFO     | current server update state: UPDATING_FINAL
[2025-10-29 07:45:54] 2025-10-29 11:44:49,964 | INFO     | update_server=False
[2025-10-29 07:45:54] 2025-10-29 11:44:49,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-29 07:45:54] 2025-10-29 11:44:49,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-29 07:45:54] 2025-10-29 11:44:50,011 | INFO     | all data control threads have been joined
[2025-10-29 07:45:54] 2025-10-29 11:44:50,128 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 07:45:54] 2025-10-29 11:44:50,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-29 07:45:54] 2025-10-29 11:44:50,236 | INFO     | aborting loop
[2025-10-29 07:45:54] 2025-10-29 11:44:50,315 | INFO     | all job control threads have been joined
[2025-10-29 07:45:54] 2025-10-29 11:44:50,809 | INFO     | all payload control threads have been joined
[2025-10-29 07:45:54] 2025-10-29 11:44:50,970 | INFO     | [job] retrieve thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:50,971 | INFO     | [job] queue monitor thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:50,997 | INFO     | [payload] validate_post thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:51,016 | INFO     | [data] control thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:51,192 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:51,241 | INFO     | [job] job monitor thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:51,242 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:51,321 | INFO     | [job] control thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:51,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 07:45:54] 2025-10-29 11:44:51,594 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:51,694 | INFO     | [data] copytool_in thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:51,813 | INFO     | [payload] control thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:51,999 | INFO     | [payload] failed_post thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:52,134 | INFO     | [data] copytool_out thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:52,304 | INFO     | [job] validate thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:44:55,580 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:45:00,648 | INFO     | job.realtimelogging is not enabled
[2025-10-29 07:45:54] 2025-10-29 11:45:01,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 07:45:54] 2025-10-29 11:45:19,940 | INFO     | PID=30140 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-29 07:45:54] 2025-10-29 11:45:19,940 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 07:45:54] 2025-10-29 11:45:19,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 07:45:54] 2025-10-29 11:45:19,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 07:45:54] 2025-10-29 11:45:48,161 | INFO     | [monitor] cgroup control has ended
[2025-10-29 07:45:54] 2025-10-29 11:45:49,354 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140197807429440)>', '<ExcThread(monitor, started 140197362644736)>']
[2025-10-29 07:45:54] 2025-10-29 11:45:50,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 07:45:54] 2025-10-29 11:45:50,090 | INFO     | [monitor] control thread has ended
[2025-10-29 07:45:54] 2025-10-29 11:45:54,375 | INFO     | all workflow threads have been joined
[2025-10-29 07:45:54] 2025-10-29 11:45:54,375 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 07:45:54] 2025-10-29 11:45:54,375 | INFO     | traces error code: 0
[2025-10-29 07:45:54] 2025-10-29 11:45:54,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 07:45:54] 2025-10-29 11:45:54,468 [wrapper] ==== pilot stdout END ====
[2025-10-29 07:45:54] 2025-10-29 11:45:54,472 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 07:45:54] 2025-10-29 11:45:54,475 [wrapper] pilotpid: 30140
[2025-10-29 07:45:54] 2025-10-29 11:45:54,479 [wrapper] Pilot exit status: 0
[2025-10-29 07:45:54] 2025-10-29 11:45:54,495 [wrapper] pandaids: 6864341021
[2025-10-29 07:45:54] 2025-10-29 11:45:54,546 [wrapper] cleanup supervisor_pilot 18987 30141
[2025-10-29 07:45:54] 2025-10-29 11:45:54,550 [wrapper] Test setup, not cleaning
[2025-10-29 07:45:54] 2025-10-29 11:45:54,554 [wrapper] apfmon messages muted
[2025-10-29 07:45:54] 2025-10-29 11:45:54,559 [wrapper] ==== wrapper stdout END ====
[2025-10-29 07:45:54] 2025-10-29 11:45:54,563 [wrapper] ==== wrapper stderr END ====
[2025-10-29 07:45:54]  *** Error codes and diagnostics ***
[2025-10-29 07:45:54]     "exeErrorCode": 0,
[2025-10-29 07:45:54]     "exeErrorDiag": "",
[2025-10-29 07:45:54]     "pilotErrorCode": 0,
[2025-10-29 07:45:54]     "pilotErrorDiag": "",
[2025-10-29 07:45:54]  *** Listing of results directory ***
[2025-10-29 07:45:54] total 390680
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas    557409 Oct 29 02:21 pilot3.tar.gz
[2025-10-29 07:45:54] -rwx------ 1 boincer umatlas     36292 Oct 29 02:34 runpilot2-wrapper.sh
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas      5112 Oct 29 02:34 queuedata.json
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas       100 Oct 29 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 07:45:54] -rwxr-xr-x 1 boincer umatlas      7986 Oct 29 06:39 run_atlas
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas       105 Oct 29 06:39 job.xml
[2025-10-29 07:45:54] -rw-r--r-- 2 boincer umatlas 214221760 Oct 29 06:39 EVNT.47081487._000337.pool.root.1
[2025-10-29 07:45:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 29 06:39 start_atlas.sh
[2025-10-29 07:45:54] drwxrwx--x 2 boincer umatlas      4096 Oct 29 06:39 shared
[2025-10-29 07:45:54] -rw-r--r-- 2 boincer umatlas    569671 Oct 29 06:39 input.tar.gz
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas         0 Oct 29 06:39 boinc_lockfile
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas      2524 Oct 29 06:39 pandaJob.out
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas    979122 Oct 29 06:39 agis_schedconf.cvmfs.json
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas   1560632 Oct 29 06:39 agis_ddmendpoints.agis.ALL.json
[2025-10-29 07:45:54] drwx------ 5 boincer umatlas      4096 Oct 29 06:39 pilot3
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas 180042860 Oct 29 07:44 HITS.47081490._008658.pool.root.1
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas       529 Oct 29 07:44 boinc_task_state.xml
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas        95 Oct 29 07:44 pilot_heartbeat.json
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas      1044 Oct 29 07:44 memory_monitor_summary.json
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas    368415 Oct 29 07:44 log.47081490._008658.job.log.tgz.1
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas      7845 Oct 29 07:44 heartbeat.json
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas      5952 Oct 29 07:45 init_data.xml
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas      8192 Oct 29 07:45 boinc_mmap_file
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas        27 Oct 29 07:45 wrapper_checkpoint.txt
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas      4818 Oct 29 07:45 pilotlog.txt
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas    575262 Oct 29 07:45 log.47081490._008658.job.log.1
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas       357 Oct 29 07:45 output.list
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas       620 Oct 29 07:45 runtime_log
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas    962560 Oct 29 07:45 result.tar.gz
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas       658 Oct 29 07:45 ShULDmswEY8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLNoMDmEVTyHm.diag
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas      8700 Oct 29 07:45 runtime_log.err
[2025-10-29 07:45:54] -rw-r--r-- 1 boincer umatlas     21992 Oct 29 07:45 stderr.txt
[2025-10-29 07:45:54] HITS file was successfully produced:
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas 180042860 Oct 29 07:44 shared/HITS.pool.root.1
[2025-10-29 07:45:54]  *** Contents of shared directory: ***
[2025-10-29 07:45:54] total 386548
[2025-10-29 07:45:54] -rw-r--r-- 2 boincer umatlas 214221760 Oct 29 06:39 ATLAS.root_0
[2025-10-29 07:45:54] -rw-r--r-- 2 boincer umatlas     15120 Oct 29 06:39 start_atlas.sh
[2025-10-29 07:45:54] -rw-r--r-- 2 boincer umatlas    569671 Oct 29 06:39 input.tar.gz
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas 180042860 Oct 29 07:44 HITS.pool.root.1
[2025-10-29 07:45:54] -rw------- 1 boincer umatlas    962560 Oct 29 07:45 result.tar.gz
07:45:56 (26366): run_atlas exited; CPU time 41540.054862
07:45:56 (26366): called boinc_finish(0)

</stderr_txt>
]]>

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