Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
03:03:07 (232754): wrapper (7.7.26015): starting
03:03:07 (232754): wrapper: running run_atlas (--nthreads 12)
[2025-10-29 03:03:07] Arguments: --nthreads 12
[2025-10-29 03:03:07] Threads: 12
[2025-10-29 03:03:07] Checking for CVMFS
[2025-10-29 03:03:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 03:03:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 03:03:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 03:03:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 03:03:13] 2.13.2.0 48069 163 46496 152259 1 188 2221091 40960001 4580 130560 0 481159 99.994 5533 72 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-29 03:03:13] CVMFS is ok
[2025-10-29 03:03:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 03:03:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-29 03:03:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-29 03:03:13] Further information can be found at the LHC@home message board.
[2025-10-29 03:03:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 03:03:13] Checking for apptainer binary...
[2025-10-29 03:03:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 03:03:13] Running /usr/bin/apptainer --version
[2025-10-29 03:03:13] apptainer version 1.4.3-1.fc42
[2025-10-29 03:03:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 03:03:14] fedora
[2025-10-29 03:03:14] apptainer works
[2025-10-29 03:03:14] Set ATHENA_PROC_NUMBER=12
[2025-10-29 03:03:14] Set ATHENA_CORE_NUMBER=12
[2025-10-29 03:03:14] Starting ATLAS job with PandaID=6864330190
[2025-10-29 03:03:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/fedoravm/slots/71 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 05:03:16]  *** The last 200 lines of the pilot log: ***
[2025-10-29 05:03:16] 2025-10-29 12:02:41,401 | INFO     | sum of square deviations: 447383272.0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,403 | INFO     | sum of deviations: 51460250442.99998
[2025-10-29 05:03:16] 2025-10-29 12:02:41,403 | INFO     | mean x: 1761735845.0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,403 | INFO     | mean y: 2531279.150442478
[2025-10-29 05:03:16] 2025-10-29 12:02:41,405 | INFO     | -- intersect: -202641093264.12524
[2025-10-29 05:03:16] 2025-10-29 12:02:41,405 | INFO     | intersect: -202641093264.12524
[2025-10-29 05:03:16] 2025-10-29 12:02:41,405 | INFO     | chi2: 6.0319027162951
[2025-10-29 05:03:16] 2025-10-29 12:02:41,406 | INFO     | sum of square deviations: 390582207.0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,407 | INFO     | sum of deviations: 56554609628.0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,407 | INFO     | mean x: 1761735692.5
[2025-10-29 05:03:16] 2025-10-29 12:02:41,409 | INFO     | mean y: 2544218.685185185
[2025-10-29 05:03:16] 2025-10-29 12:02:41,409 | INFO     | -- intersect: -255089143450.15875
[2025-10-29 05:03:16] 2025-10-29 12:02:41,410 | INFO     | intersect: -255089143450.15875
[2025-10-29 05:03:16] 2025-10-29 12:02:41,410 | INFO     | chi2: 5.34523428756858
[2025-10-29 05:03:16] 2025-10-29 12:02:41,410 | INFO     | current chi2=5.34523428756858 (change=11.383944022696106 %)
[2025-10-29 05:03:16] 2025-10-29 12:02:41,410 | INFO     | right removable region: 107
[2025-10-29 05:03:16] 2025-10-29 12:02:41,411 | INFO     | sum of square deviations: 390582207.0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,413 | INFO     | sum of deviations: 16288225886.499989
[2025-10-29 05:03:16] 2025-10-29 12:02:41,413 | INFO     | mean x: 1761735997.5
[2025-10-29 05:03:16] 2025-10-29 12:02:41,413 | INFO     | mean y: 2625392.212962963
[2025-10-29 05:03:16] 2025-10-29 12:02:41,413 | INFO     | -- intersect: -73466041037.9974
[2025-10-29 05:03:16] 2025-10-29 12:02:41,414 | INFO     | intersect: -73466041037.9974
[2025-10-29 05:03:16] 2025-10-29 12:02:41,415 | INFO     | chi2: 2.2760772467773673
[2025-10-29 05:03:16] 2025-10-29 12:02:41,415 | INFO     | current chi2=2.2760772467773673 (change=62.266015321689835 %)
[2025-10-29 05:03:16] 2025-10-29 12:02:41,416 | INFO     | sum of square deviations: 338804492.0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,417 | INFO     | sum of deviations: -5056727064.999999
[2025-10-29 05:03:16] 2025-10-29 12:02:41,418 | INFO     | mean x: 1761736150.0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,419 | INFO     | mean y: 2687807.213592233
[2025-10-29 05:03:16] 2025-10-29 12:02:41,419 | INFO     | -- intersect: 26296963950.086864
[2025-10-29 05:03:16] 2025-10-29 12:02:41,419 | INFO     | intersect: 26296963950.086864
[2025-10-29 05:03:16] 2025-10-29 12:02:41,419 | INFO     | chi2: 0.896358496300046
[2025-10-29 05:03:16] 2025-10-29 12:02:41,421 | INFO     | current chi2=0.896358496300046 (change=60.618274376707795 %)
[2025-10-29 05:03:16] 2025-10-29 12:02:41,421 | INFO     | sum of square deviations: 291817564.5
[2025-10-29 05:03:16] 2025-10-29 12:02:41,423 | INFO     | sum of deviations: -10586502633.5
[2025-10-29 05:03:16] 2025-10-29 12:02:41,423 | INFO     | mean x: 1761736302.5
[2025-10-29 05:03:16] 2025-10-29 12:02:41,423 | INFO     | mean y: 2705392.3775510206
[2025-10-29 05:03:16] 2025-10-29 12:02:41,423 | INFO     | -- intersect: 63914643105.60181
[2025-10-29 05:03:16] 2025-10-29 12:02:41,424 | INFO     | intersect: 63914643105.60181
[2025-10-29 05:03:16] 2025-10-29 12:02:41,425 | INFO     | chi2: 0.7401753570995244
[2025-10-29 05:03:16] 2025-10-29 12:02:41,425 | INFO     | current chi2=0.7401753570995244 (change=17.42418238296489 %)
[2025-10-29 05:03:16] 2025-10-29 12:02:41,425 | INFO     | left removable region: 30
[2025-10-29 05:03:16] 2025-10-29 12:02:41,427 | INFO     | sum of square deviations: 141539398.0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,427 | INFO     | sum of deviations: -3179084601.0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,427 | INFO     | mean x: 1761736577.0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,428 | INFO     | mean y: 2728416.1818181816
[2025-10-29 05:03:16] 2025-10-29 12:02:41,429 | INFO     | -- intersect: 39572697640.999
[2025-10-29 05:03:16] 2025-10-29 12:02:41,429 | INFO     | intersect: 39572697640.999
[2025-10-29 05:03:16] 2025-10-29 12:02:41,429 | INFO     | chi2: 0.01043118227165996
[2025-10-29 05:03:16] 2025-10-29 12:02:41,431 | INFO     | -- intersect: 39572697640.999
[2025-10-29 05:03:16] 2025-10-29 12:02:41,432 | INFO     | current memory leak: -22.46 B/s (using 77 data points, chi2=0.01)
[2025-10-29 05:03:16] 2025-10-29 12:02:41,433 | INFO     | could have reported an average CPU frequency of 2095 MHz (7 samples)
[2025-10-29 05:03:16] 2025-10-29 12:02:41,435 | INFO     | ..............................
[2025-10-29 05:03:16] 2025-10-29 12:02:41,435 | INFO     | . Timing measurements:
[2025-10-29 05:03:16] 2025-10-29 12:02:41,435 | INFO     | . get job = 0 s
[2025-10-29 05:03:16] 2025-10-29 12:02:41,435 | INFO     | . initial setup = 27 s
[2025-10-29 05:03:16] 2025-10-29 12:02:41,435 | INFO     | . payload setup = 38 s
[2025-10-29 05:03:16] 2025-10-29 12:02:41,437 | INFO     | . stage-in = 0 s
[2025-10-29 05:03:16] 2025-10-29 12:02:41,437 | INFO     | . payload execution = 6894 s
[2025-10-29 05:03:16] 2025-10-29 12:02:41,437 | INFO     | . stage-out = 2 s
[2025-10-29 05:03:16] 2025-10-29 12:02:41,437 | INFO     | . log creation = 0 s
[2025-10-29 05:03:16] 2025-10-29 12:02:41,437 | INFO     | ..............................
[2025-10-29 05:03:16] 2025-10-29 12:02:41,993 | INFO     | 
[2025-10-29 05:03:16] 2025-10-29 12:02:41,994 | INFO     | job summary report
[2025-10-29 05:03:16] 2025-10-29 12:02:41,994 | INFO     | --------------------------------------------------
[2025-10-29 05:03:16] 2025-10-29 12:02:41,994 | INFO     | PanDA job id: 6864330190
[2025-10-29 05:03:16] 2025-10-29 12:02:41,994 | INFO     | task id: 47081490
[2025-10-29 05:03:16] 2025-10-29 12:02:41,994 | INFO     | errors: (none)
[2025-10-29 05:03:16] 2025-10-29 12:02:41,994 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-29 05:03:16] 2025-10-29 12:02:41,995 | INFO     | pilot state: finished 
[2025-10-29 05:03:16] 2025-10-29 12:02:41,995 | INFO     | transexitcode: 0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,995 | INFO     | exeerrorcode: 0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,995 | INFO     | exeerrordiag: 
[2025-10-29 05:03:16] 2025-10-29 12:02:41,995 | INFO     | exitcode: 0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,995 | INFO     | exitmsg: OK
[2025-10-29 05:03:16] 2025-10-29 12:02:41,996 | INFO     | cpuconsumptiontime: 53723 s
[2025-10-29 05:03:16] 2025-10-29 12:02:41,996 | INFO     | nevents: 400
[2025-10-29 05:03:16] 2025-10-29 12:02:41,996 | INFO     | neventsw: 0
[2025-10-29 05:03:16] 2025-10-29 12:02:41,996 | INFO     | pid: 244012
[2025-10-29 05:03:16] 2025-10-29 12:02:41,996 | INFO     | pgrp: 244012
[2025-10-29 05:03:16] 2025-10-29 12:02:41,998 | INFO     | corecount: 12
[2025-10-29 05:03:16] 2025-10-29 12:02:41,998 | INFO     | event service: False
[2025-10-29 05:03:16] 2025-10-29 12:02:41,999 | INFO     | sizes: {0: 2348713, 1: 2348713, 2: 2348912, 12: 2348940, 23: 2348968, 28: 2349258, 34: 2349414, 6937: 2376666, 6941: 2385722, 7004: 2385860}
[2025-10-29 05:03:16] 2025-10-29 12:02:41,999 | INFO     | --------------------------------------------------
[2025-10-29 05:03:16] 2025-10-29 12:02:41,999 | INFO     | 
[2025-10-29 05:03:16] 2025-10-29 12:02:41,999 | INFO     | executing command: ls -lF /home/fedoravm/slots/71
[2025-10-29 05:03:16] 2025-10-29 12:02:42,526 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,528 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,529 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,533 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-29 05:03:16] 2025-10-29 12:02:42,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-29 05:03:16] 2025-10-29 12:02:42,534 | INFO     | job 6864330190 has completed (purged errors)
[2025-10-29 05:03:16] 2025-10-29 12:02:42,537 | INFO     | overall cleanup function is called
[2025-10-29 05:03:16] 2025-10-29 12:02:42,595 | INFO     | PID=237091 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-29 05:03:16] 2025-10-29 12:02:43,572 | INFO     | --- collectZombieJob: --- 10, [244012]
[2025-10-29 05:03:16] 2025-10-29 12:02:43,573 | INFO     | zombie collector waiting for pid 244012
[2025-10-29 05:03:16] 2025-10-29 12:02:43,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-29 05:03:16] 2025-10-29 12:02:43,573 | INFO     | collected zombie processes
[2025-10-29 05:03:16] 2025-10-29 12:02:43,573 | INFO     | will attempt to kill all subprocesses of pid=244012
[2025-10-29 05:03:16] 2025-10-29 12:02:44,212 | INFO     | process IDs to be killed: [244012] (in reverse order)
[2025-10-29 05:03:16] 2025-10-29 12:02:44,622 | WARNING  | found no corresponding commands to process id(s)
[2025-10-29 05:03:16] 2025-10-29 12:02:44,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-29 05:03:16] 2025-10-29 12:02:44,633 | INFO     | did not find any defunct processes belonging to 244012
[2025-10-29 05:03:16] 2025-10-29 12:02:44,643 | INFO     | did not find any defunct processes belonging to 244012
[2025-10-29 05:03:16] 2025-10-29 12:02:44,644 | INFO     | ready for new job
[2025-10-29 05:03:16] 2025-10-29 12:02:44,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-29 05:03:16] 2025-10-29 12:02:44,647 | INFO     | ***************************************
[2025-10-29 05:03:16] 2025-10-29 12:02:44,648 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-29 05:03:16] 2025-10-29 12:02:44,648 | INFO     | ***************************************
[2025-10-29 05:03:16] 2025-10-29 12:02:44,648 | INFO     | 
[2025-10-29 05:03:16] 2025-10-29 12:02:44,651 | INFO     | pilot is running in a VM
[2025-10-29 05:03:16] 2025-10-29 12:02:44,651 | INFO     | architecture information:
[2025-10-29 05:03:16] 2025-10-29 12:02:44,655 | INFO     | executing command: cat /etc/os-release
[2025-10-29 05:03:16] 2025-10-29 12:02:44,854 | INFO     | cat /etc/os-release:
[2025-10-29 05:03:16] NAME="CentOS Linux"
[2025-10-29 05:03:16] VERSION="7 (Core)"
[2025-10-29 05:03:16] ID="centos"
[2025-10-29 05:03:16] ID_LIKE="rhel fedora"
[2025-10-29 05:03:16] VERSION_ID="7"
[2025-10-29 05:03:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-29 05:03:16] ANSI_COLOR="0;31"
[2025-10-29 05:03:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-29 05:03:16] HOME_URL="https://www.centos.org/"
[2025-10-29 05:03:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-29 05:03:16] 
[2025-10-29 05:03:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-29 05:03:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-29 05:03:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-29 05:03:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-29 05:03:16] 
[2025-10-29 05:03:16] 2025-10-29 12:02:44,858 | INFO     | ***************************************
[2025-10-29 05:03:16] 2025-10-29 12:02:45,363 | INFO     | executing command: df -mP /home/fedoravm/slots/71
[2025-10-29 05:03:16] 2025-10-29 12:02:45,830 | INFO     | sufficient remaining disk space (53953429504 B)
[2025-10-29 05:03:16] 2025-10-29 12:02:45,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-29 05:03:16] 2025-10-29 12:02:45,831 | INFO     | current server update state: UPDATING_FINAL
[2025-10-29 05:03:16] 2025-10-29 12:02:45,833 | INFO     | update_server=False
[2025-10-29 05:03:16] 2025-10-29 12:02:45,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-29 05:03:16] 2025-10-29 12:02:45,906 | INFO     | all payload control threads have been joined
[2025-10-29 05:03:16] 2025-10-29 12:02:46,208 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-29 05:03:16] 2025-10-29 12:02:46,209 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-29 05:03:16] 2025-10-29 12:02:46,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-29 05:03:16] 2025-10-29 12:02:46,209 | INFO     | will abort loop
[2025-10-29 05:03:16] 2025-10-29 12:02:46,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 05:03:16] 2025-10-29 12:02:46,665 | INFO     | all data control threads have been joined
[2025-10-29 05:03:16] 2025-10-29 12:02:46,820 | INFO     | all job control threads have been joined
[2025-10-29 05:03:16] 2025-10-29 12:02:46,837 | INFO     | [job] retrieve thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:46,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-29 05:03:16] 2025-10-29 12:02:46,867 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:46,912 | INFO     | [payload] control thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:46,999 | INFO     | [data] copytool_in thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:47,067 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:47,214 | INFO     | [job] job monitor thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:47,220 | INFO     | [job] validate thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:47,564 | INFO     | [payload] failed_post thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:47,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 05:03:16] 2025-10-29 12:02:47,670 | INFO     | [data] control thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:47,826 | INFO     | [job] control thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:47,869 | INFO     | [job] queue monitor thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:47,943 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:48,128 | INFO     | [payload] validate_post thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:48,563 | INFO     | [data] copytool_out thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:51,632 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:02:56,181 | INFO     | job.realtimelogging is not enabled
[2025-10-29 05:03:16] 2025-10-29 12:02:57,186 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 05:03:16] 2025-10-29 12:03:08,825 | INFO     | [monitor] cgroup control has ended
[2025-10-29 05:03:16] 2025-10-29 12:03:09,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131691194176)>', '<ExcThread(monitor, started 140131184912128)>']
[2025-10-29 05:03:16] 2025-10-29 12:03:14,126 | INFO     | all workflow threads have been joined
[2025-10-29 05:03:16] 2025-10-29 12:03:14,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 05:03:16] 2025-10-29 12:03:14,127 | INFO     | traces error code: 0
[2025-10-29 05:03:16] 2025-10-29 12:03:14,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 05:03:16] 2025-10-29 12:03:15,313 | INFO     | PID=237091 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-29 05:03:16] 2025-10-29 12:03:15,314 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 05:03:16] 2025-10-29 12:03:15,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 05:03:16] 2025-10-29 12:03:15,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 05:03:16] 2025-10-29 12:03:15,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 05:03:16] 2025-10-29 12:03:15,314 | INFO     | [monitor] control thread has ended
[2025-10-29 05:03:16] 2025-10-29 12:03:15,514 [wrapper] ==== pilot stdout END ====
[2025-10-29 05:03:16] 2025-10-29 12:03:15,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 05:03:16] 2025-10-29 12:03:15,551 [wrapper] pilotpid: 237091
[2025-10-29 05:03:16] 2025-10-29 12:03:15,580 [wrapper] Pilot exit status: 0
[2025-10-29 05:03:16] 2025-10-29 12:03:15,660 [wrapper] pandaids: 6864330190
[2025-10-29 05:03:16] 2025-10-29 12:03:15,853 [wrapper] cleanup supervisor_pilot  294343 237092
[2025-10-29 05:03:16] 2025-10-29 12:03:15,870 [wrapper] Test setup, not cleaning
[2025-10-29 05:03:16] 2025-10-29 12:03:15,885 [wrapper] apfmon messages muted
[2025-10-29 05:03:16] 2025-10-29 12:03:15,901 [wrapper] ==== wrapper stdout END ====
[2025-10-29 05:03:16] 2025-10-29 12:03:15,929 [wrapper] ==== wrapper stderr END ====
[2025-10-29 05:03:16]  *** Error codes and diagnostics ***
[2025-10-29 05:03:16]     "exeErrorCode": 0,
[2025-10-29 05:03:16]     "exeErrorDiag": "",
[2025-10-29 05:03:16]     "pilotErrorCode": 0,
[2025-10-29 05:03:16]     "pilotErrorDiag": "",
[2025-10-29 05:03:16]  *** Listing of results directory ***
[2025-10-29 05:03:16] total 391492
[2025-10-29 05:03:16] -rwx------. 1 fedoravm fedoravm     36292 Oct 28 23:11 runpilot2-wrapper.sh
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm    557409 Oct 28 23:12 pilot3.tar.gz
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm      5112 Oct 28 23:12 queuedata.json
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm       100 Oct 29 03:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 05:03:16] -rwxr-xr-x. 1 fedoravm fedoravm      7986 Oct 29 03:03 run_atlas
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm       105 Oct 29 03:03 job.xml
[2025-10-29 05:03:16] -rw-r--r--. 2 fedoravm fedoravm 214782267 Oct 29 03:03 EVNT.47081487._000255.pool.root.1
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm      6451 Oct 29 03:03 init_data.xml
[2025-10-29 05:03:16] drwxrwx--x. 1 fedoravm fedoravm        76 Oct 29 03:03 shared
[2025-10-29 05:03:16] -rw-r--r--. 2 fedoravm fedoravm    569678 Oct 29 03:03 input.tar.gz
[2025-10-29 05:03:16] -rw-r--r--. 2 fedoravm fedoravm     15120 Oct 29 03:03 start_atlas.sh
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm         0 Oct 29 03:03 boinc_lockfile
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm      2525 Oct 29 03:03 pandaJob.out
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm    979106 Oct 29 03:04 agis_schedconf.cvmfs.json
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm   1560632 Oct 29 03:04 agis_ddmendpoints.agis.ALL.json
[2025-10-29 05:03:16] drwx------. 1 fedoravm fedoravm       414 Oct 29 03:04 pilot3
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm 179451693 Oct 29 05:00 HITS.47081490._006621.pool.root.1
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm       530 Oct 29 05:00 boinc_task_state.xml
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm      1027 Oct 29 05:01 memory_monitor_summary.json
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm    416498 Oct 29 05:01 log.47081490._006621.job.log.tgz.1
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm        95 Oct 29 05:02 pilot_heartbeat.json
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm      7783 Oct 29 05:02 heartbeat.json
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm      8192 Oct 29 05:02 boinc_mmap_file
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm        27 Oct 29 05:02 wrapper_checkpoint.txt
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm       746 Oct 29 05:03 pilotlog.txt
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm    964005 Oct 29 05:03 log.47081490._006621.job.log.1
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm       357 Oct 29 05:03 output.list
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm       620 Oct 29 05:03 runtime_log
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm   1402880 Oct 29 05:03 result.tar.gz
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm      8662 Oct 29 05:03 runtime_log.err
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm       641 Oct 29 05:03 9G9MDmkaEY8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgmFODmWwNVJo.diag
[2025-10-29 05:03:16] -rw-r--r--. 1 fedoravm fedoravm     21094 Oct 29 05:03 stderr.txt
[2025-10-29 05:03:16] HITS file was successfully produced:
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm 179451693 Oct 29 05:00 shared/HITS.pool.root.1
[2025-10-29 05:03:16]  *** Contents of shared directory: ***
[2025-10-29 05:03:16] total 386948
[2025-10-29 05:03:16] -rw-r--r--. 2 fedoravm fedoravm 214782267 Oct 29 03:03 ATLAS.root_0
[2025-10-29 05:03:16] -rw-r--r--. 2 fedoravm fedoravm    569678 Oct 29 03:03 input.tar.gz
[2025-10-29 05:03:16] -rw-r--r--. 2 fedoravm fedoravm     15120 Oct 29 03:03 start_atlas.sh
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm 179451693 Oct 29 05:00 HITS.pool.root.1
[2025-10-29 05:03:16] -rw-------. 1 fedoravm fedoravm   1402880 Oct 29 05:03 result.tar.gz
05:03:18 (232754): run_atlas exited; CPU time 54079.080952
05:03:18 (232754): called boinc_finish(0)

</stderr_txt>
]]>

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