Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:49:53 (343185): wrapper (7.7.26015): starting
04:49:53 (343185): wrapper: running run_atlas (--nthreads 8)
[2025-10-29 04:49:53] Arguments: --nthreads 8
[2025-10-29 04:49:53] Threads: 8
[2025-10-29 04:49:53] Checking for CVMFS
[2025-10-29 04:49:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 04:49:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 04:49:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 04:49:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 04:49:53] 2.13.2.0 953388 110570 431088 152258 0 196 29167817 32935937 10040 16776704 0 637946833 99.737 425435704 16588 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-29 04:49:53] CVMFS is ok
[2025-10-29 04:49:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 04:49:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-29 04:49:53] Further information can be found at the LHC@home message board.
[2025-10-29 04:49:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 04:49:53] Checking for apptainer binary...
[2025-10-29 04:49:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 04:49:53] Running /usr/bin/apptainer --version
[2025-10-29 04:49:53] apptainer version 1.4.3-1.el9
[2025-10-29 04:49:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 04:49:54] c7-2-10.aglt2.org
[2025-10-29 04:49:54] apptainer works
[2025-10-29 04:49:54] Set ATHENA_PROC_NUMBER=8
[2025-10-29 04:49:54] Set ATHENA_CORE_NUMBER=8
[2025-10-29 04:49:54] Starting ATLAS job with PandaID=6864333873
[2025-10-29 04:49:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 05:52:32]  *** The last 200 lines of the pilot log: ***
[2025-10-29 05:52:32]  status=None
[2025-10-29 05:52:32]  status_code=0
[2025-10-29 05:52:32]  storage_token=
[2025-10-29 05:52:32]  surl=/tmp/boinchome/slots/9/PanDA_Pilot-6864333873/log.47081490._006969.job.log.tgz.1
[2025-10-29 05:52:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/25/log.47081490._006969.job.log.tgz.1
[2025-10-29 05:52:32]  workdir=None
[2025-10-29 05:52:32] ]
[2025-10-29 05:52:32] 2025-10-29 09:51:53,281 | INFO     | transferring file log.47081490._006969.job.log.tgz.1 from /tmp/boinchome/slots/9/PanDA_Pilot-6864333873/log.47081490._006969.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-29 05:52:32] 2025-10-29 09:51:53,281 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/9/PanDA_Pilot-6864333873/log.47081490._006969.job.log.tgz.1 /tmp/boinchome/slots/9/log.47081490._006969.job
[2025-10-29 05:52:32] 2025-10-29 09:51:53,303 | INFO     | adding to output.list: log.47081490._006969.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/25/log.47081490._006969.job.log.tg
[2025-10-29 05:52:32] 2025-10-29 09:51:53,304 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-29 05:52:32] 2025-10-29 09:51:53,304 | INFO     | summary of transferred files:
[2025-10-29 05:52:32] 2025-10-29 09:51:53,304 | INFO     |  -- lfn=log.47081490._006969.job.log.tgz.1, status_code=0, status=transferred
[2025-10-29 05:52:32] 2025-10-29 09:51:53,304 | INFO     | stage-out finished correctly
[2025-10-29 05:52:32] 2025-10-29 09:51:53,840 | INFO     | monitor loop #271: job 0:6864333873 is in state 'finished'
[2025-10-29 05:52:32] 2025-10-29 09:51:53,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 05:52:32] 2025-10-29 09:51:54,211 | INFO     | time since job start (3710s) is within the limit (172800.0s)
[2025-10-29 05:52:32] 2025-10-29 09:51:55,712 | INFO     | PID=346994 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-29 05:52:32] 2025-10-29 09:51:55,713 | INFO     | .. there are 14 such processes running
[2025-10-29 05:52:32] 2025-10-29 09:51:56,344 | INFO     | monitor loop #272: job 0:6864333873 is in state 'finished'
[2025-10-29 05:52:32] 2025-10-29 09:51:56,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 05:52:32] 2025-10-29 09:51:56,713 | INFO     | time since job start (3712s) is within the limit (172800.0s)
[2025-10-29 05:52:32] 2025-10-29 09:51:56,803 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-29 05:52:32] 2025-10-29 09:51:56,881 | INFO     | job 6864333873 has state=finished
[2025-10-29 05:52:32] 2025-10-29 09:51:56,881 | INFO     | preparing for final server update for job 6864333873 in state='finished'
[2025-10-29 05:52:32] 2025-10-29 09:51:56,881 | INFO     | this job has now completed (state=finished)
[2025-10-29 05:52:32] 2025-10-29 09:51:56,881 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-29 05:52:32] 2025-10-29 09:51:56,882 | INFO     | log transfer has been attempted: DONE
[2025-10-29 05:52:32] 2025-10-29 09:51:56,882 | INFO     | job 6864333873 has finished - writing final server update
[2025-10-29 05:52:32] 2025-10-29 09:51:56,882 | INFO     | total number of processed events: 400 (read)
[2025-10-29 05:52:32] 2025-10-29 09:51:56,882 | INFO     | executing command: lscpu
[2025-10-29 05:52:32] 2025-10-29 09:51:56,961 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-29 05:52:32] 2025-10-29 09:51:58,719 | INFO     | time since job start (3714s) is within the limit (172800.0s)
[2025-10-29 05:52:32] 2025-10-29 09:51:58,850 | INFO     | monitor loop #273: job 0:6864333873 is in state 'finished'
[2025-10-29 05:52:32] 2025-10-29 09:51:58,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 05:52:32] 2025-10-29 09:52:00,273 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-29 05:52:32] 2025-10-29 09:52:00,297 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3302.6505625000004
[2025-10-29 05:52:32] 2025-10-29 09:52:00,311 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6864333873/memory_monitor_summary.json (trf name=prmon)
[2025-10-29 05:52:32] 2025-10-29 09:52:00,312 | INFO     | extracted standard info from prmon json
[2025-10-29 05:52:32] 2025-10-29 09:52:00,312 | INFO     | extracted standard memory fields from prmon json
[2025-10-29 05:52:32] 2025-10-29 09:52:00,312 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-29 05:52:32] 2025-10-29 09:52:00,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-29 05:52:32] 2025-10-29 09:52:00,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-29 05:52:32] 2025-10-29 09:52:00,314 | INFO     | fitting pss+swap vs Time
[2025-10-29 05:52:32] 2025-10-29 09:52:00,314 | INFO     | sum of square deviations: 48810217.5
[2025-10-29 05:52:32] 2025-10-29 09:52:00,314 | INFO     | sum of deviations: 280601891.0
[2025-10-29 05:52:32] 2025-10-29 09:52:00,314 | INFO     | mean x: 1761729751.5
[2025-10-29 05:52:32] 2025-10-29 09:52:00,314 | INFO     | mean y: 2168721.074074074
[2025-10-29 05:52:32] 2025-10-29 09:52:00,314 | INFO     | -- intersect: -10125725089.312246
[2025-10-29 05:52:32] 2025-10-29 09:52:00,314 | INFO     | intersect: -10125725089.312246
[2025-10-29 05:52:32] 2025-10-29 09:52:00,314 | INFO     | chi2: 0.007812843227644639
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | -- intersect: -10125725089.312246
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | current memory leak: 5.75 B/s (using 54 data points, chi2=0.01)
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | could have reported an average CPU frequency of 3321 MHz (6 samples)
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | ..............................
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | . Timing measurements:
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | . get job = 0 s
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | . initial setup = 2 s
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | . payload setup = 5 s
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | . stage-in = 0 s
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | . payload execution = 3683 s
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | . stage-out = 0 s
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | . log creation = 0 s
[2025-10-29 05:52:32] 2025-10-29 09:52:00,315 | INFO     | ..............................
[2025-10-29 05:52:32] 2025-10-29 09:52:00,392 | INFO     | 
[2025-10-29 05:52:32] 2025-10-29 09:52:00,393 | INFO     | job summary report
[2025-10-29 05:52:32] 2025-10-29 09:52:00,393 | INFO     | --------------------------------------------------
[2025-10-29 05:52:32] 2025-10-29 09:52:00,393 | INFO     | PanDA job id: 6864333873
[2025-10-29 05:52:32] 2025-10-29 09:52:00,393 | INFO     | task id: 47081490
[2025-10-29 05:52:32] 2025-10-29 09:52:00,393 | INFO     | errors: (none)
[2025-10-29 05:52:32] 2025-10-29 09:52:00,393 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-29 05:52:32] 2025-10-29 09:52:00,393 | INFO     | pilot state: finished 
[2025-10-29 05:52:32] 2025-10-29 09:52:00,393 | INFO     | transexitcode: 0
[2025-10-29 05:52:32] 2025-10-29 09:52:00,393 | INFO     | exeerrorcode: 0
[2025-10-29 05:52:32] 2025-10-29 09:52:00,393 | INFO     | exeerrordiag: 
[2025-10-29 05:52:32] 2025-10-29 09:52:00,393 | INFO     | exitcode: 0
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | exitmsg: OK
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | cpuconsumptiontime: 26211 s
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | nevents: 400
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | neventsw: 0
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | pid: 355132
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | pgrp: 355132
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | corecount: 8
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | event service: False
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | sizes: {0: 2348883, 4: 2349145, 11: 2349173, 3692: 2374932, 3693: 2383985, 3697: 2383985, 3700: 2384307}
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | --------------------------------------------------
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | 
[2025-10-29 05:52:32] 2025-10-29 09:52:00,394 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-10-29 05:52:32] 2025-10-29 09:52:00,419 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,419 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,419 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,420 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-29 05:52:32] 2025-10-29 09:52:00,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,421 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-29 05:52:32] 2025-10-29 09:52:00,421 | INFO     | job 6864333873 has completed (purged errors)
[2025-10-29 05:52:32] 2025-10-29 09:52:00,421 | INFO     | overall cleanup function is called
[2025-10-29 05:52:32] 2025-10-29 09:52:01,429 | INFO     | --- collectZombieJob: --- 10, [355132]
[2025-10-29 05:52:32] 2025-10-29 09:52:01,430 | INFO     | zombie collector waiting for pid 355132
[2025-10-29 05:52:32] 2025-10-29 09:52:01,430 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-29 05:52:32] 2025-10-29 09:52:01,430 | INFO     | collected zombie processes
[2025-10-29 05:52:32] 2025-10-29 09:52:01,430 | INFO     | will attempt to kill all subprocesses of pid=355132
[2025-10-29 05:52:32] 2025-10-29 09:52:01,706 | INFO     | process IDs to be killed: [355132] (in reverse order)
[2025-10-29 05:52:32] 2025-10-29 09:52:01,794 | WARNING  | found no corresponding commands to process id(s)
[2025-10-29 05:52:32] 2025-10-29 09:52:01,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-29 05:52:32] 2025-10-29 09:52:01,809 | INFO     | did not find any defunct processes belonging to 355132
[2025-10-29 05:52:32] 2025-10-29 09:52:01,821 | INFO     | did not find any defunct processes belonging to 355132
[2025-10-29 05:52:32] 2025-10-29 09:52:01,821 | INFO     | ready for new job
[2025-10-29 05:52:32] 2025-10-29 09:52:01,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-29 05:52:32] 2025-10-29 09:52:01,823 | INFO     | ***************************************
[2025-10-29 05:52:32] 2025-10-29 09:52:01,825 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-29 05:52:32] 2025-10-29 09:52:01,825 | INFO     | ***************************************
[2025-10-29 05:52:32] 2025-10-29 09:52:01,825 | INFO     | 
[2025-10-29 05:52:32] 2025-10-29 09:52:01,842 | INFO     | architecture information:
[2025-10-29 05:52:32] 2025-10-29 09:52:01,842 | INFO     | executing command: cat /etc/os-release
[2025-10-29 05:52:32] 2025-10-29 09:52:01,862 | INFO     | cat /etc/os-release:
[2025-10-29 05:52:32] NAME="CentOS Linux"
[2025-10-29 05:52:32] VERSION="7 (Core)"
[2025-10-29 05:52:32] ID="centos"
[2025-10-29 05:52:32] ID_LIKE="rhel fedora"
[2025-10-29 05:52:32] VERSION_ID="7"
[2025-10-29 05:52:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-29 05:52:32] ANSI_COLOR="0;31"
[2025-10-29 05:52:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-29 05:52:32] HOME_URL="https://www.centos.org/"
[2025-10-29 05:52:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-29 05:52:32] 
[2025-10-29 05:52:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-29 05:52:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-29 05:52:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-29 05:52:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-29 05:52:32] 
[2025-10-29 05:52:32] 2025-10-29 09:52:01,862 | INFO     | ***************************************
[2025-10-29 05:52:32] 2025-10-29 09:52:02,364 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-10-29 05:52:32] 2025-10-29 09:52:02,385 | INFO     | sufficient remaining disk space (70911000576 B)
[2025-10-29 05:52:32] 2025-10-29 09:52:02,385 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-29 05:52:32] 2025-10-29 09:52:02,385 | INFO     | current server update state: UPDATING_FINAL
[2025-10-29 05:52:32] 2025-10-29 09:52:02,386 | INFO     | update_server=False
[2025-10-29 05:52:32] 2025-10-29 09:52:02,386 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-29 05:52:32] 2025-10-29 09:52:02,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 05:52:32] 2025-10-29 09:52:02,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-29 05:52:32] 2025-10-29 09:52:02,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-29 05:52:32] 2025-10-29 09:52:02,387 | INFO     | aborting loop
[2025-10-29 05:52:32] 2025-10-29 09:52:02,668 | INFO     | all payload control threads have been joined
[2025-10-29 05:52:32] 2025-10-29 09:52:02,776 | INFO     | all job control threads have been joined
[2025-10-29 05:52:32] 2025-10-29 09:52:02,891 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 05:52:32] 2025-10-29 09:52:03,391 | INFO     | [job] retrieve thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:03,392 | INFO     | [job] queue monitor thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:03,393 | INFO     | [job] job monitor thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:03,416 | INFO     | [job] validate thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:03,433 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:03,484 | INFO     | all data control threads have been joined
[2025-10-29 05:52:32] 2025-10-29 09:52:03,673 | INFO     | [payload] control thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:03,689 | INFO     | [data] copytool_in thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:03,782 | INFO     | [job] control thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:03,801 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:03,855 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:04,309 | INFO     | [payload] failed_post thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:04,387 | INFO     | [data] copytool_out thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:04,490 | INFO     | [data] control thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:04,799 | INFO     | [payload] validate_post thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:06,899 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:10,224 | INFO     | [monitor] cgroup control has ended
[2025-10-29 05:52:32] 2025-10-29 09:52:12,617 | INFO     | job.realtimelogging is not enabled
[2025-10-29 05:52:32] 2025-10-29 09:52:13,623 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 05:52:32] 2025-10-29 09:52:15,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140470763296576)>', '<ExcThread(monitor, started 140469900134144)>']
[2025-10-29 05:52:32] 2025-10-29 09:52:20,649 | INFO     | all workflow threads have been joined
[2025-10-29 05:52:32] 2025-10-29 09:52:20,649 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 05:52:32] 2025-10-29 09:52:20,650 | INFO     | traces error code: 0
[2025-10-29 05:52:32] 2025-10-29 09:52:20,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 05:52:32] 2025-10-29 09:52:32,340 | INFO     | PID=346994 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-29 05:52:32] 2025-10-29 09:52:32,342 | INFO     | .. there are 14 such processes running
[2025-10-29 05:52:32] 2025-10-29 09:52:32,343 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 05:52:32] 2025-10-29 09:52:32,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 05:52:32] 2025-10-29 09:52:32,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 05:52:32] 2025-10-29 09:52:32,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 05:52:32] 2025-10-29 09:52:32,344 | INFO     | [monitor] control thread has ended
[2025-10-29 05:52:32] 2025-10-29 09:52:32,464 [wrapper] ==== pilot stdout END ====
[2025-10-29 05:52:32] 2025-10-29 09:52:32,468 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 05:52:32] 2025-10-29 09:52:32,471 [wrapper] pilotpid: 346994
[2025-10-29 05:52:32] 2025-10-29 09:52:32,475 [wrapper] Pilot exit status: 0
[2025-10-29 05:52:32] 2025-10-29 09:52:32,487 [wrapper] pandaids: 6864333873
[2025-10-29 05:52:32] 2025-10-29 09:52:32,588 [wrapper] cleanup supervisor_pilot  698178 346995
[2025-10-29 05:52:32] 2025-10-29 09:52:32,592 [wrapper] Test setup, not cleaning
[2025-10-29 05:52:32] 2025-10-29 09:52:32,595 [wrapper] apfmon messages muted
[2025-10-29 05:52:32] 2025-10-29 09:52:32,599 [wrapper] ==== wrapper stdout END ====
[2025-10-29 05:52:32] 2025-10-29 09:52:32,602 [wrapper] ==== wrapper stderr END ====
[2025-10-29 05:52:32]  *** Error codes and diagnostics ***
[2025-10-29 05:52:32]     "exeErrorCode": 0,
[2025-10-29 05:52:32]     "exeErrorDiag": "",
[2025-10-29 05:52:32]     "pilotErrorCode": 0,
[2025-10-29 05:52:32]     "pilotErrorDiag": "",
[2025-10-29 05:52:32]  *** Listing of results directory ***
[2025-10-29 05:52:32] total 395184
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 29 02:12 pilot3.tar.gz
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 29 02:13 queuedata.json
[2025-10-29 05:52:32] -rwx------. 1 boincer umatlas     36292 Oct 29 02:13 runpilot2-wrapper.sh
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas       100 Oct 29 04:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 05:52:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 29 04:49 run_atlas
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas       105 Oct 29 04:49 job.xml
[2025-10-29 05:52:32] -rw-r--r--. 2 boincer umatlas 216791135 Oct 29 04:49 EVNT.47081487._000269.pool.root.1
[2025-10-29 05:52:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 29 04:49 start_atlas.sh
[2025-10-29 05:52:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 29 04:49 shared
[2025-10-29 05:52:32] -rw-r--r--. 2 boincer umatlas    569676 Oct 29 04:49 input.tar.gz
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas         0 Oct 29 04:49 boinc_lockfile
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas      2525 Oct 29 04:49 pandaJob.out
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas    979090 Oct 29 04:50 agis_schedconf.cvmfs.json
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas   1560632 Oct 29 04:50 agis_ddmendpoints.agis.ALL.json
[2025-10-29 05:52:32] drwx------. 5 boincer umatlas      4096 Oct 29 04:50 pilot3
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas      6935 Oct 29 05:48 init_data.xml
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas 182220840 Oct 29 05:51 HITS.47081490._006969.pool.root.1
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas       529 Oct 29 05:51 boinc_task_state.xml
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas      1027 Oct 29 05:51 memory_monitor_summary.json
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas    322306 Oct 29 05:51 log.47081490._006969.job.log.tgz.1
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas      7765 Oct 29 05:52 heartbeat.json
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 29 05:52 boinc_mmap_file
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas        27 Oct 29 05:52 wrapper_checkpoint.txt
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas        95 Oct 29 05:52 pilot_heartbeat.json
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas       822 Oct 29 05:52 pilotlog.txt
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas    554022 Oct 29 05:52 log.47081490._006969.job.log.1
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas       357 Oct 29 05:52 output.list
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas       620 Oct 29 05:52 runtime_log
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas    890880 Oct 29 05:52 result.tar.gz
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas      8698 Oct 29 05:52 runtime_log.err
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas       650 Oct 29 05:52 NihMDmzbEY8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQ9nMDmFZR7bm.diag
[2025-10-29 05:52:32] -rw-r--r--. 1 boincer umatlas     22057 Oct 29 05:52 stderr.txt
[2025-10-29 05:52:32] HITS file was successfully produced:
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas 182220840 Oct 29 05:51 shared/HITS.pool.root.1
[2025-10-29 05:52:32]  *** Contents of shared directory: ***
[2025-10-29 05:52:32] total 391120
[2025-10-29 05:52:32] -rw-r--r--. 2 boincer umatlas 216791135 Oct 29 04:49 ATLAS.root_0
[2025-10-29 05:52:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 29 04:49 start_atlas.sh
[2025-10-29 05:52:32] -rw-r--r--. 2 boincer umatlas    569676 Oct 29 04:49 input.tar.gz
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas 182220840 Oct 29 05:51 HITS.pool.root.1
[2025-10-29 05:52:32] -rw-------. 1 boincer umatlas    890880 Oct 29 05:52 result.tar.gz
05:52:34 (343185): run_atlas exited; CPU time 26325.373499
05:52:34 (343185): called boinc_finish(0)

</stderr_txt>
]]>

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