Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:23:21 (3033402): wrapper (7.7.26015): starting
12:23:21 (3033402): wrapper: running run_atlas (--nthreads 12)
[2025-10-29 12:23:21] Arguments: --nthreads 12
[2025-10-29 12:23:21] Threads: 12
[2025-10-29 12:23:21] Checking for CVMFS
[2025-10-29 12:23:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 12:23:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 12:23:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 12:23:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 12:23:22] 2.13.2.0 9461 40247 115924 152263 0 57 16289708 46080001 922 130560 0 73292677 99.996 1401980 13859 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-29 12:23:22] CVMFS is ok
[2025-10-29 12:23:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 12:23:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-29 12:23:22] Further information can be found at the LHC@home message board.
[2025-10-29 12:23:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 12:23:22] Checking for apptainer binary...
[2025-10-29 12:23:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 12:23:22] Running /usr/bin/apptainer --version
[2025-10-29 12:23:22] apptainer version 1.4.2-1.el9
[2025-10-29 12:23:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 12:23:22] minis01.farm.particle.cz
[2025-10-29 12:23:22] apptainer works
[2025-10-29 12:23:22] Set ATHENA_PROC_NUMBER=12
[2025-10-29 12:23:22] Set ATHENA_CORE_NUMBER=12
[2025-10-29 12:23:22] Starting ATLAS job with PandaID=6864224827
[2025-10-29 12:23:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 13:09:40]  *** The last 200 lines of the pilot log: ***
[2025-10-29 13:09:40]  storage_token=
[2025-10-29 13:09:40]  surl=/var/lib/boinc/slots/4/PanDA_Pilot-6864224827/log.47081490._005084.job.log.tgz.1
[2025-10-29 13:09:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/fe/log.47081490._005084.job.log.tgz.1
[2025-10-29 13:09:40]  workdir=None
[2025-10-29 13:09:40] ]
[2025-10-29 13:09:40] 2025-10-29 12:08:45,369 | INFO     | transferring file log.47081490._005084.job.log.tgz.1 from /var/lib/boinc/slots/4/PanDA_Pilot-6864224827/log.47081490._005084.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-29 13:09:40] 2025-10-29 12:08:45,369 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/4/PanDA_Pilot-6864224827/log.47081490._005084.job.log.tgz.1 /var/lib/boinc/slots/4/log.47081490._005084.job
[2025-10-29 13:09:40] 2025-10-29 12:08:45,387 | INFO     | adding to output.list: log.47081490._005084.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/fe/log.47081490._005084.job.log.tg
[2025-10-29 13:09:40] 2025-10-29 12:08:45,387 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-29 13:09:40] 2025-10-29 12:08:45,387 | INFO     | summary of transferred files:
[2025-10-29 13:09:40] 2025-10-29 12:08:45,387 | INFO     |  -- lfn=log.47081490._005084.job.log.tgz.1, status_code=0, status=transferred
[2025-10-29 13:09:40] 2025-10-29 12:08:45,388 | INFO     | stage-out finished correctly
[2025-10-29 13:09:40] 2025-10-29 12:08:46,584 | INFO     | time since job start (2716s) is within the limit (172800.0s)
[2025-10-29 13:09:40] 2025-10-29 12:08:47,595 | INFO     | monitor loop #208: job 0:6864224827 is in state 'finished'
[2025-10-29 13:09:40] 2025-10-29 12:08:47,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 13:09:40] 2025-10-29 12:08:48,174 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-29 13:09:40] 2025-10-29 12:08:48,589 | INFO     | time since job start (2718s) is within the limit (172800.0s)
[2025-10-29 13:09:40] 2025-10-29 12:08:48,696 | INFO     | job 6864224827 has state=finished
[2025-10-29 13:09:40] 2025-10-29 12:08:48,696 | INFO     | preparing for final server update for job 6864224827 in state='finished'
[2025-10-29 13:09:40] 2025-10-29 12:08:49,271 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-29 13:09:40] 2025-10-29 12:08:49,271 | INFO     | this job has now completed (state=finished)
[2025-10-29 13:09:40] 2025-10-29 12:08:49,271 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-29 13:09:40] 2025-10-29 12:08:49,272 | INFO     | log transfer has been attempted: DONE
[2025-10-29 13:09:40] 2025-10-29 12:08:49,272 | INFO     | job 6864224827 has finished - writing final server update
[2025-10-29 13:09:40] 2025-10-29 12:08:49,272 | INFO     | total number of processed events: 400 (read)
[2025-10-29 13:09:40] 2025-10-29 12:08:49,273 | INFO     | executing command: lscpu
[2025-10-29 13:09:40] 2025-10-29 12:08:49,306 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-29 13:09:40] 2025-10-29 12:08:50,098 | INFO     | monitor loop #209: job 0:6864224827 is in state 'finished'
[2025-10-29 13:09:40] 2025-10-29 12:08:50,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 13:09:40] 2025-10-29 12:08:50,594 | INFO     | time since job start (2720s) is within the limit (172800.0s)
[2025-10-29 13:09:40] 2025-10-29 12:08:51,786 | INFO     | PID=3037301 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-29 13:09:40] 2025-10-29 12:08:51,786 | INFO     | .. there are 2 such processes running
[2025-10-29 13:09:40] 2025-10-29 12:08:52,601 | INFO     | monitor loop #210: job 0:6864224827 is in state 'finished'
[2025-10-29 13:09:40] 2025-10-29 12:08:52,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 13:09:40] 2025-10-29 12:08:52,787 | INFO     | time since job start (2722s) is within the limit (172800.0s)
[2025-10-29 13:09:40] 2025-10-29 12:08:52,932 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-29 13:09:40] 2025-10-29 12:08:52,939 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2736.0896875000003
[2025-10-29 13:09:40] 2025-10-29 12:08:52,945 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6864224827/memory_monitor_summary.json (trf name=prmon)
[2025-10-29 13:09:40] 2025-10-29 12:08:52,946 | INFO     | extracted standard info from prmon json
[2025-10-29 13:09:40] 2025-10-29 12:08:52,946 | INFO     | extracted standard memory fields from prmon json
[2025-10-29 13:09:40] 2025-10-29 12:08:52,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-29 13:09:40] 2025-10-29 12:08:52,947 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-29 13:09:40] 2025-10-29 12:08:52,947 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-29 13:09:40] 2025-10-29 12:08:52,948 | INFO     | fitting pss+swap vs Time
[2025-10-29 13:09:40] 2025-10-29 12:08:52,948 | INFO     | sum of square deviations: 17003109.5
[2025-10-29 13:09:40] 2025-10-29 12:08:52,948 | INFO     | sum of deviations: -1345132167.0
[2025-10-29 13:09:40] 2025-10-29 12:08:52,948 | INFO     | mean x: 1761738468.5
[2025-10-29 13:09:40] 2025-10-29 12:08:52,948 | INFO     | mean y: 3069424.5789473685
[2025-10-29 13:09:40] 2025-10-29 12:08:52,948 | INFO     | -- intersect: 139375875546.93356
[2025-10-29 13:09:40] 2025-10-29 12:08:52,948 | INFO     | intersect: 139375875546.93356
[2025-10-29 13:09:40] 2025-10-29 12:08:52,949 | INFO     | chi2: 0.01703650677114993
[2025-10-29 13:09:40] 2025-10-29 12:08:52,949 | INFO     | -- intersect: 139375875546.93356
[2025-10-29 13:09:40] 2025-10-29 12:08:52,949 | INFO     | current memory leak: -79.11 B/s (using 38 data points, chi2=0.02)
[2025-10-29 13:09:40] 2025-10-29 12:08:52,949 | INFO     | could have reported an average CPU frequency of 2773 MHz (5 samples)
[2025-10-29 13:09:40] 2025-10-29 12:08:52,949 | INFO     | ..............................
[2025-10-29 13:09:40] 2025-10-29 12:08:52,949 | INFO     | . Timing measurements:
[2025-10-29 13:09:40] 2025-10-29 12:08:52,949 | INFO     | . get job = 0 s
[2025-10-29 13:09:40] 2025-10-29 12:08:52,949 | INFO     | . initial setup = 1 s
[2025-10-29 13:09:40] 2025-10-29 12:08:52,949 | INFO     | . payload setup = 5 s
[2025-10-29 13:09:40] 2025-10-29 12:08:52,949 | INFO     | . stage-in = 0 s
[2025-10-29 13:09:40] 2025-10-29 12:08:52,949 | INFO     | . payload execution = 2690 s
[2025-10-29 13:09:40] 2025-10-29 12:08:52,950 | INFO     | . stage-out = 0 s
[2025-10-29 13:09:40] 2025-10-29 12:08:52,950 | INFO     | . log creation = 0 s
[2025-10-29 13:09:40] 2025-10-29 12:08:52,950 | INFO     | ..............................
[2025-10-29 13:09:40] 2025-10-29 12:08:53,020 | INFO     | 
[2025-10-29 13:09:40] 2025-10-29 12:08:53,020 | INFO     | job summary report
[2025-10-29 13:09:40] 2025-10-29 12:08:53,020 | INFO     | --------------------------------------------------
[2025-10-29 13:09:40] 2025-10-29 12:08:53,021 | INFO     | PanDA job id: 6864224827
[2025-10-29 13:09:40] 2025-10-29 12:08:53,021 | INFO     | task id: 47081490
[2025-10-29 13:09:40] 2025-10-29 12:08:53,021 | INFO     | errors: (none)
[2025-10-29 13:09:40] 2025-10-29 12:08:53,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-29 13:09:40] 2025-10-29 12:08:53,021 | INFO     | pilot state: finished 
[2025-10-29 13:09:40] 2025-10-29 12:08:53,021 | INFO     | transexitcode: 0
[2025-10-29 13:09:40] 2025-10-29 12:08:53,021 | INFO     | exeerrorcode: 0
[2025-10-29 13:09:40] 2025-10-29 12:08:53,021 | INFO     | exeerrordiag: 
[2025-10-29 13:09:40] 2025-10-29 12:08:53,021 | INFO     | exitcode: 0
[2025-10-29 13:09:40] 2025-10-29 12:08:53,021 | INFO     | exitmsg: OK
[2025-10-29 13:09:40] 2025-10-29 12:08:53,022 | INFO     | cpuconsumptiontime: 29285 s
[2025-10-29 13:09:40] 2025-10-29 12:08:53,022 | INFO     | nevents: 400
[2025-10-29 13:09:40] 2025-10-29 12:08:53,022 | INFO     | neventsw: 0
[2025-10-29 13:09:40] 2025-10-29 12:08:53,022 | INFO     | pid: 3044382
[2025-10-29 13:09:40] 2025-10-29 12:08:53,022 | INFO     | pgrp: 3044382
[2025-10-29 13:09:40] 2025-10-29 12:08:53,022 | INFO     | corecount: 12
[2025-10-29 13:09:40] 2025-10-29 12:08:53,022 | INFO     | event service: False
[2025-10-29 13:09:40] 2025-10-29 12:08:53,022 | INFO     | sizes: {0: 2348712, 1: 2348911, 4: 2349173, 11: 2349201, 2698: 2374528, 2700: 2383526, 2703: 2383710, 2708: 2383936}
[2025-10-29 13:09:40] 2025-10-29 12:08:53,022 | INFO     | --------------------------------------------------
[2025-10-29 13:09:40] 2025-10-29 12:08:53,022 | INFO     | 
[2025-10-29 13:09:40] 2025-10-29 12:08:53,023 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-29 13:09:40] 2025-10-29 12:08:53,042 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,042 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-29 13:09:40] 2025-10-29 12:08:53,043 | INFO     | job 6864224827 has completed (purged errors)
[2025-10-29 13:09:40] 2025-10-29 12:08:53,044 | INFO     | overall cleanup function is called
[2025-10-29 13:09:40] 2025-10-29 12:08:54,052 | INFO     | --- collectZombieJob: --- 10, [3044382]
[2025-10-29 13:09:40] 2025-10-29 12:08:54,052 | INFO     | zombie collector waiting for pid 3044382
[2025-10-29 13:09:40] 2025-10-29 12:08:54,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-29 13:09:40] 2025-10-29 12:08:54,052 | INFO     | collected zombie processes
[2025-10-29 13:09:40] 2025-10-29 12:08:54,052 | INFO     | will attempt to kill all subprocesses of pid=3044382
[2025-10-29 13:09:40] 2025-10-29 12:08:54,188 | INFO     | process IDs to be killed: [3044382] (in reverse order)
[2025-10-29 13:09:40] 2025-10-29 12:08:54,238 | WARNING  | found no corresponding commands to process id(s)
[2025-10-29 13:09:40] 2025-10-29 12:08:54,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-29 13:09:40] 2025-10-29 12:08:54,244 | INFO     | did not find any defunct processes belonging to 3044382
[2025-10-29 13:09:40] 2025-10-29 12:08:54,248 | INFO     | did not find any defunct processes belonging to 3044382
[2025-10-29 13:09:40] 2025-10-29 12:08:54,248 | INFO     | ready for new job
[2025-10-29 13:09:40] 2025-10-29 12:08:54,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-29 13:09:40] 2025-10-29 12:08:54,249 | INFO     | ***************************************
[2025-10-29 13:09:40] 2025-10-29 12:08:54,249 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-29 13:09:40] 2025-10-29 12:08:54,250 | INFO     | ***************************************
[2025-10-29 13:09:40] 2025-10-29 12:08:54,250 | INFO     | 
[2025-10-29 13:09:40] 2025-10-29 12:08:54,251 | INFO     | architecture information:
[2025-10-29 13:09:40] 2025-10-29 12:08:54,251 | INFO     | executing command: cat /etc/os-release
[2025-10-29 13:09:40] 2025-10-29 12:08:54,265 | INFO     | cat /etc/os-release:
[2025-10-29 13:09:40] NAME="CentOS Linux"
[2025-10-29 13:09:40] VERSION="7 (Core)"
[2025-10-29 13:09:40] ID="centos"
[2025-10-29 13:09:40] ID_LIKE="rhel fedora"
[2025-10-29 13:09:40] VERSION_ID="7"
[2025-10-29 13:09:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-29 13:09:40] ANSI_COLOR="0;31"
[2025-10-29 13:09:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-29 13:09:40] HOME_URL="https://www.centos.org/"
[2025-10-29 13:09:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-29 13:09:40] 
[2025-10-29 13:09:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-29 13:09:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-29 13:09:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-29 13:09:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-29 13:09:40] 
[2025-10-29 13:09:40] 2025-10-29 12:08:54,266 | INFO     | ***************************************
[2025-10-29 13:09:40] 2025-10-29 12:08:54,768 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-29 13:09:40] 2025-10-29 12:08:54,784 | INFO     | sufficient remaining disk space (65962770432 B)
[2025-10-29 13:09:40] 2025-10-29 12:08:54,784 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-29 13:09:40] 2025-10-29 12:08:54,784 | INFO     | current server update state: UPDATING_FINAL
[2025-10-29 13:09:40] 2025-10-29 12:08:54,784 | INFO     | update_server=False
[2025-10-29 13:09:40] 2025-10-29 12:08:54,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-29 13:09:40] 2025-10-29 12:08:54,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-29 13:09:40] 2025-10-29 12:08:54,785 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-29 13:09:40] 2025-10-29 12:08:54,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 13:09:40] 2025-10-29 12:08:54,786 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 13:09:40] 2025-10-29 12:08:54,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 13:09:40] 2025-10-29 12:08:54,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 13:09:40] 2025-10-29 12:08:55,104 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-29 13:09:40] 2025-10-29 12:08:55,105 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-29 13:09:40] 2025-10-29 12:08:55,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-29 13:09:40] 2025-10-29 12:08:55,105 | INFO     | will abort loop
[2025-10-29 13:09:40] 2025-10-29 12:08:55,288 | INFO     | all payload control threads have been joined
[2025-10-29 13:09:40] 2025-10-29 12:08:55,576 | INFO     | all data control threads have been joined
[2025-10-29 13:09:40] 2025-10-29 12:08:55,670 | INFO     | all job control threads have been joined
[2025-10-29 13:09:40] 2025-10-29 12:08:55,790 | INFO     | [job] retrieve thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:55,791 | INFO     | [job] queue monitor thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:55,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 13:09:40] 2025-10-29 12:08:56,083 | INFO     | [payload] validate_post thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:56,110 | INFO     | [job] job monitor thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:56,287 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:56,294 | INFO     | [payload] control thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:56,305 | INFO     | [job] validate thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:56,379 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:56,581 | INFO     | [data] control thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:56,582 | INFO     | [payload] failed_post thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:56,676 | INFO     | [job] control thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:56,830 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:56,969 | INFO     | [data] copytool_in thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:56,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:57,989 | INFO     | [data] copytool_out thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:08:58,792 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 13:09:40] 2025-10-29 12:09:33,878 | INFO     | [monitor] cgroup control has ended
[2025-10-29 13:09:40] 2025-10-29 12:09:35,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394097764160)>', '<ExcThread(monitor, started 140393454745344)>']
[2025-10-29 13:09:40] 2025-10-29 12:09:35,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 13:09:40] 2025-10-29 12:09:35,977 | INFO     | [monitor] control thread has ended
[2025-10-29 13:09:40] 2025-10-29 12:09:40,356 | INFO     | all workflow threads have been joined
[2025-10-29 13:09:40] 2025-10-29 12:09:40,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 13:09:40] 2025-10-29 12:09:40,357 | INFO     | traces error code: 0
[2025-10-29 13:09:40] 2025-10-29 12:09:40,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 13:09:40] 2025-10-29 12:09:40,467 [wrapper] ==== pilot stdout END ====
[2025-10-29 13:09:40] 2025-10-29 12:09:40,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 13:09:40] 2025-10-29 12:09:40,472 [wrapper] pilotpid: 3037301
[2025-10-29 13:09:40] 2025-10-29 12:09:40,475 [wrapper] Pilot exit status: 0
[2025-10-29 13:09:40] 2025-10-29 12:09:40,485 [wrapper] pandaids: 6864224827
[2025-10-29 13:09:40] 2025-10-29 12:09:40,522 [wrapper] cleanup supervisor_pilot 3096171 3037302
[2025-10-29 13:09:40] 2025-10-29 12:09:40,525 [wrapper] Test setup, not cleaning
[2025-10-29 13:09:40] 2025-10-29 12:09:40,527 [wrapper] apfmon messages muted
[2025-10-29 13:09:40] 2025-10-29 12:09:40,530 [wrapper] ==== wrapper stdout END ====
[2025-10-29 13:09:40] 2025-10-29 12:09:40,532 [wrapper] ==== wrapper stderr END ====
[2025-10-29 13:09:40]  *** Error codes and diagnostics ***
[2025-10-29 13:09:40]     "exeErrorCode": 0,
[2025-10-29 13:09:40]     "exeErrorDiag": "",
[2025-10-29 13:09:40]     "pilotErrorCode": 0,
[2025-10-29 13:09:40]     "pilotErrorDiag": "",
[2025-10-29 13:09:40]  *** Listing of results directory ***
[2025-10-29 13:09:40] total 388052
[2025-10-29 13:09:40] -rwx------. 1 boinc boinc     36292 Oct 29 06:13 runpilot2-wrapper.sh
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc      5112 Oct 29 06:14 queuedata.json
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc    557409 Oct 29 06:14 pilot3.tar.gz
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc       100 Oct 29 12:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 13:09:40] -rwxr-xr-x. 1 boinc boinc      7986 Oct 29 12:23 run_atlas
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc       105 Oct 29 12:23 job.xml
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc      6518 Oct 29 12:23 init_data.xml
[2025-10-29 13:09:40] -rw-r--r--. 2 boinc boinc 214890708 Oct 29 12:23 EVNT.47081487._000193.pool.root.1
[2025-10-29 13:09:40] -rw-r--r--. 2 boinc boinc     15120 Oct 29 12:23 start_atlas.sh
[2025-10-29 13:09:40] drwxrwx--x. 2 boinc boinc      4096 Oct 29 12:23 shared
[2025-10-29 13:09:40] -rw-r--r--. 2 boinc boinc    569678 Oct 29 12:23 input.tar.gz
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc         0 Oct 29 12:23 boinc_lockfile
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc      2525 Oct 29 12:23 pandaJob.out
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc    982980 Oct 29 12:23 agis_schedconf.cvmfs.json
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc   1560632 Oct 29 12:23 agis_ddmendpoints.agis.ALL.json
[2025-10-29 13:09:40] drwx------. 5 boinc boinc      4096 Oct 29 12:23 pilot3
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc        95 Oct 29 13:08 pilot_heartbeat.json
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc 176961357 Oct 29 13:08 HITS.47081490._005084.pool.root.1
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc       529 Oct 29 13:08 boinc_task_state.xml
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc      1016 Oct 29 13:08 memory_monitor_summary.json
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc    373042 Oct 29 13:08 log.47081490._005084.job.log.tgz.1
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc      7775 Oct 29 13:08 heartbeat.json
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc      8192 Oct 29 13:09 boinc_mmap_file
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc        27 Oct 29 13:09 wrapper_checkpoint.txt
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc      4738 Oct 29 13:09 pilotlog.txt
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc    426441 Oct 29 13:09 log.47081490._005084.job.log.1
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc       357 Oct 29 13:09 output.list
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc       620 Oct 29 13:09 runtime_log
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc    819200 Oct 29 13:09 result.tar.gz
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc      8750 Oct 29 13:09 runtime_log.err
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc       662 Oct 29 13:09 BeRMDmDgDY8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6xnMDmR50YDn.diag
[2025-10-29 13:09:40] -rw-r--r--. 1 boinc boinc     22217 Oct 29 13:09 stderr.txt
[2025-10-29 13:09:40] HITS file was successfully produced:
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc 176961357 Oct 29 13:08 shared/HITS.pool.root.1
[2025-10-29 13:09:40]  *** Contents of shared directory: ***
[2025-10-29 13:09:40] total 384056
[2025-10-29 13:09:40] -rw-r--r--. 2 boinc boinc 214890708 Oct 29 12:23 ATLAS.root_0
[2025-10-29 13:09:40] -rw-r--r--. 2 boinc boinc     15120 Oct 29 12:23 start_atlas.sh
[2025-10-29 13:09:40] -rw-r--r--. 2 boinc boinc    569678 Oct 29 12:23 input.tar.gz
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc 176961357 Oct 29 13:08 HITS.pool.root.1
[2025-10-29 13:09:40] -rw-------. 1 boinc boinc    819200 Oct 29 13:09 result.tar.gz
13:09:41 (3033402): run_atlas exited; CPU time 29296.951055
13:09:41 (3033402): called boinc_finish(0)

</stderr_txt>
]]>

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