Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:30:37 (576885): wrapper (7.7.26015): starting
12:30:37 (576885): wrapper: running run_atlas (--nthreads 4)
[2025-10-29 12:30:37] Arguments: --nthreads 4
[2025-10-29 12:30:37] Threads: 4
[2025-10-29 12:30:37] Checking for CVMFS
[2025-10-29 12:30:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 12:30:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 12:30:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 12:30:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 12:30:38] 2.9.2.0 525847 126 54580 152263 1 57 32033607 36864000 0 130560 0 130724 99.985 6747 855 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-29 12:30:38] CVMFS is ok
[2025-10-29 12:30:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 12:30:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-29 12:30:38] Further information can be found at the LHC@home message board.
[2025-10-29 12:30:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 12:30:38] Checking for apptainer binary...
[2025-10-29 12:30:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 12:30:38] Running /usr/bin/apptainer --version
[2025-10-29 12:30:38] apptainer version 1.4.1-1.1
[2025-10-29 12:30:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 12:30:38] atlasA139
[2025-10-29 12:30:38] apptainer works
[2025-10-29 12:30:38] Set ATHENA_PROC_NUMBER=4
[2025-10-29 12:30:38] Set ATHENA_CORE_NUMBER=4
[2025-10-29 12:30:38] Starting ATLAS job with PandaID=6864221275
[2025-10-29 12:30:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 13:33:56]  *** The last 200 lines of the pilot log: ***
[2025-10-29 13:33:56]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6864221275/log.47081490._003987.job.log.tgz.1
[2025-10-29 13:33:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/f2/log.47081490._003987.job.log.tgz.1
[2025-10-29 13:33:56]  workdir=None
[2025-10-29 13:33:56] ]
[2025-10-29 13:33:56] 2025-10-29 12:32:44,449 | INFO     | transferring file log.47081490._003987.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6864221275/log.47081490._003987.job.log.tgz.1 to /local/data/boinc/
[2025-10-29 13:33:56] 2025-10-29 12:32:44,449 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6864221275/log.47081490._003987.job.log.tgz.1 /local/data/boinc/slots/0/log.47081490._0039
[2025-10-29 13:33:56] 2025-10-29 12:32:44,468 | INFO     | adding to output.list: log.47081490._003987.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/f2/log.47081490._003987.job.log.tg
[2025-10-29 13:33:56] 2025-10-29 12:32:44,469 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-29 13:33:56] 2025-10-29 12:32:44,469 | INFO     | summary of transferred files:
[2025-10-29 13:33:56] 2025-10-29 12:32:44,469 | INFO     |  -- lfn=log.47081490._003987.job.log.tgz.1, status_code=0, status=transferred
[2025-10-29 13:33:56] 2025-10-29 12:32:44,469 | INFO     | stage-out finished correctly
[2025-10-29 13:33:56] 2025-10-29 12:32:45,513 | INFO     | time since job start (3719s) is within the limit (172800.0s)
[2025-10-29 13:33:56] 2025-10-29 12:32:47,519 | INFO     | time since job start (3721s) is within the limit (172800.0s)
[2025-10-29 13:33:56] 2025-10-29 12:32:47,970 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-29 13:33:56] 2025-10-29 12:32:48,057 | WARNING  | process 587313 can no longer be monitored (due to stat problems) - aborting
[2025-10-29 13:33:56] 2025-10-29 12:32:48,057 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6864221275/memory_monitor_summary.json (trf name=prmon)
[2025-10-29 13:33:56] 2025-10-29 12:32:48,101 | INFO     | number of running child processes to parent process 587313: 1
[2025-10-29 13:33:56] 2025-10-29 12:32:48,101 | INFO     | maximum number of monitored processes: 6
[2025-10-29 13:33:56] 2025-10-29 12:32:49,526 | INFO     | time since job start (3723s) is within the limit (172800.0s)
[2025-10-29 13:33:56] 2025-10-29 12:32:49,747 | INFO     | job 6864221275 has state=finished
[2025-10-29 13:33:56] 2025-10-29 12:32:49,747 | INFO     | preparing for final server update for job 6864221275 in state='finished'
[2025-10-29 13:33:56] 2025-10-29 12:32:50,349 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-29 13:33:56] 2025-10-29 12:32:50,350 | INFO     | this job has now completed (state=finished)
[2025-10-29 13:33:56] 2025-10-29 12:32:50,350 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-29 13:33:56] 2025-10-29 12:32:50,350 | INFO     | log transfer has been attempted: DONE
[2025-10-29 13:33:56] 2025-10-29 12:32:50,350 | INFO     | job 6864221275 has finished - writing final server update
[2025-10-29 13:33:56] 2025-10-29 12:32:50,350 | INFO     | total number of processed events: 400 (read)
[2025-10-29 13:33:56] 2025-10-29 12:32:50,351 | INFO     | executing command: lscpu
[2025-10-29 13:33:56] 2025-10-29 12:32:50,370 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-29 13:33:56] 2025-10-29 12:32:50,605 | INFO     | monitor loop #286: job 0:6864221275 is in state 'finished'
[2025-10-29 13:33:56] 2025-10-29 12:32:50,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 13:33:56] 2025-10-29 12:32:51,530 | INFO     | time since job start (3725s) is within the limit (172800.0s)
[2025-10-29 13:33:56] 2025-10-29 12:32:53,108 | INFO     | monitor loop #287: job 0:6864221275 is in state 'finished'
[2025-10-29 13:33:56] 2025-10-29 12:32:53,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 13:33:56] 2025-10-29 12:32:53,536 | INFO     | time since job start (3727s) is within the limit (172800.0s)
[2025-10-29 13:33:56] 2025-10-29 12:32:53,661 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-29 13:33:56] 2025-10-29 12:32:53,662 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3235.5683125
[2025-10-29 13:33:56] 2025-10-29 12:32:53,664 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6864221275/memory_monitor_summary.json (trf name=prmon)
[2025-10-29 13:33:56] 2025-10-29 12:32:53,664 | INFO     | extracted standard info from prmon json
[2025-10-29 13:33:56] 2025-10-29 12:32:53,664 | INFO     | extracted standard memory fields from prmon json
[2025-10-29 13:33:56] 2025-10-29 12:32:53,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-29 13:33:56] 2025-10-29 12:32:53,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-29 13:33:56] 2025-10-29 12:32:53,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-29 13:33:56] 2025-10-29 12:32:53,665 | INFO     | fitting pss+swap vs Time
[2025-10-29 13:33:56] 2025-10-29 12:32:53,665 | INFO     | sum of square deviations: 48810217.5
[2025-10-29 13:33:56] 2025-10-29 12:32:53,665 | INFO     | sum of deviations: -6822351874.0
[2025-10-29 13:33:56] 2025-10-29 12:32:53,665 | INFO     | mean x: 1761739390.5
[2025-10-29 13:33:56] 2025-10-29 12:32:53,665 | INFO     | mean y: 2546100.814814815
[2025-10-29 13:33:56] 2025-10-29 12:32:53,665 | INFO     | -- intersect: 246246194416.40146
[2025-10-29 13:33:56] 2025-10-29 12:32:53,665 | INFO     | intersect: 246246194416.40146
[2025-10-29 13:33:56] 2025-10-29 12:32:53,665 | INFO     | chi2: 0.05863541752875161
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | -- intersect: 246246194416.40146
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | current memory leak: -139.77 B/s (using 54 data points, chi2=0.06)
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | could have reported an average CPU frequency of 3579 MHz (6 samples)
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | ..............................
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | . Timing measurements:
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | . get job = 0 s
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | . initial setup = 1 s
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | . payload setup = 4 s
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | . stage-in = 0 s
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | . payload execution = 3695 s
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | . stage-out = 0 s
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | . log creation = 0 s
[2025-10-29 13:33:56] 2025-10-29 12:32:53,666 | INFO     | ..............................
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | 
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | job summary report
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | --------------------------------------------------
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | PanDA job id: 6864221275
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | task id: 47081490
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | errors: (none)
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | pilot state: finished 
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | transexitcode: 0
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | exeerrorcode: 0
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | exeerrordiag: 
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | exitcode: 0
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | exitmsg: OK
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | cpuconsumptiontime: 13944 s
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | nevents: 400
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | neventsw: 0
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | pid: 587313
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | pgrp: 587313
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | corecount: 4
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | event service: False
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | sizes: {0: 2348884, 3: 2349146, 11: 2349174, 3702: 2375064, 3703: 2375063, 3704: 2384123, 3707: 2384307, 3713: 2384501}
[2025-10-29 13:33:56] 2025-10-29 12:32:53,706 | INFO     | --------------------------------------------------
[2025-10-29 13:33:56] 2025-10-29 12:32:53,707 | INFO     | 
[2025-10-29 13:33:56] 2025-10-29 12:32:53,707 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-29 13:33:56] 2025-10-29 12:32:53,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-29 13:33:56] 2025-10-29 12:32:53,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-29 13:33:56] 2025-10-29 12:32:53,725 | INFO     | job 6864221275 has completed (purged errors)
[2025-10-29 13:33:56] 2025-10-29 12:32:53,725 | INFO     | overall cleanup function is called
[2025-10-29 13:33:56] 2025-10-29 12:32:54,732 | INFO     | --- collectZombieJob: --- 10, [587313]
[2025-10-29 13:33:56] 2025-10-29 12:32:54,732 | INFO     | zombie collector waiting for pid 587313
[2025-10-29 13:33:56] 2025-10-29 12:32:54,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-29 13:33:56] 2025-10-29 12:32:54,732 | INFO     | collected zombie processes
[2025-10-29 13:33:56] 2025-10-29 12:32:54,732 | INFO     | will attempt to kill all subprocesses of pid=587313
[2025-10-29 13:33:56] 2025-10-29 12:32:54,781 | INFO     | process IDs to be killed: [587313] (in reverse order)
[2025-10-29 13:33:56] 2025-10-29 12:32:54,814 | WARNING  | found no corresponding commands to process id(s)
[2025-10-29 13:33:56] 2025-10-29 12:32:54,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-29 13:33:56] 2025-10-29 12:32:54,816 | INFO     | did not find any defunct processes belonging to 587313
[2025-10-29 13:33:56] 2025-10-29 12:32:54,818 | INFO     | did not find any defunct processes belonging to 587313
[2025-10-29 13:33:56] 2025-10-29 12:32:54,818 | INFO     | ready for new job
[2025-10-29 13:33:56] 2025-10-29 12:32:54,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-29 13:33:56] 2025-10-29 12:32:54,818 | INFO     | ***************************************
[2025-10-29 13:33:56] 2025-10-29 12:32:54,818 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-29 13:33:56] 2025-10-29 12:32:54,818 | INFO     | ***************************************
[2025-10-29 13:33:56] 2025-10-29 12:32:54,818 | INFO     | 
[2025-10-29 13:33:56] 2025-10-29 12:32:54,819 | INFO     | architecture information:
[2025-10-29 13:33:56] 2025-10-29 12:32:54,819 | INFO     | executing command: cat /etc/os-release
[2025-10-29 13:33:56] 2025-10-29 12:32:54,832 | INFO     | cat /etc/os-release:
[2025-10-29 13:33:56] NAME="CentOS Linux"
[2025-10-29 13:33:56] VERSION="7 (Core)"
[2025-10-29 13:33:56] ID="centos"
[2025-10-29 13:33:56] ID_LIKE="rhel fedora"
[2025-10-29 13:33:56] VERSION_ID="7"
[2025-10-29 13:33:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-29 13:33:56] ANSI_COLOR="0;31"
[2025-10-29 13:33:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-29 13:33:56] HOME_URL="https://www.centos.org/"
[2025-10-29 13:33:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-29 13:33:56] 
[2025-10-29 13:33:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-29 13:33:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-29 13:33:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-29 13:33:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-29 13:33:56] 
[2025-10-29 13:33:56] 2025-10-29 12:32:54,832 | INFO     | ***************************************
[2025-10-29 13:33:56] 2025-10-29 12:32:55,336 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-29 13:33:56] 2025-10-29 12:32:55,353 | INFO     | sufficient remaining disk space (329077751808 B)
[2025-10-29 13:33:56] 2025-10-29 12:32:55,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-29 13:33:56] 2025-10-29 12:32:55,354 | INFO     | current server update state: UPDATING_FINAL
[2025-10-29 13:33:56] 2025-10-29 12:32:55,354 | INFO     | update_server=False
[2025-10-29 13:33:56] 2025-10-29 12:32:55,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-29 13:33:56] 2025-10-29 12:32:55,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 13:33:56] 2025-10-29 12:32:55,354 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-29 13:33:56] 2025-10-29 12:32:55,354 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 13:33:56] 2025-10-29 12:32:55,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 13:33:56] 2025-10-29 12:32:55,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 13:33:56] 2025-10-29 12:32:55,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-29 13:33:56] 2025-10-29 12:32:55,383 | INFO     | all data control threads have been joined
[2025-10-29 13:33:56] 2025-10-29 12:32:55,612 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-29 13:33:56] 2025-10-29 12:32:55,612 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-29 13:33:56] 2025-10-29 12:32:55,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-29 13:33:56] 2025-10-29 12:32:55,612 | INFO     | will abort loop
[2025-10-29 13:33:56] 2025-10-29 12:32:56,359 | INFO     | [job] retrieve thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:56,360 | INFO     | [job] queue monitor thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:56,389 | INFO     | [data] control thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:56,618 | INFO     | [job] job monitor thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:56,641 | INFO     | all job control threads have been joined
[2025-10-29 13:33:56] 2025-10-29 12:32:56,675 | INFO     | all payload control threads have been joined
[2025-10-29 13:33:56] 2025-10-29 12:32:57,046 | INFO     | [payload] validate_post thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:57,133 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:57,243 | INFO     | [job] validate thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:57,326 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:57,360 | INFO     | [data] copytool_out thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:57,427 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:57,647 | INFO     | [job] control thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:57,675 | INFO     | [payload] failed_post thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:57,681 | INFO     | [payload] control thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:57,715 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:57,834 | INFO     | [data] copytool_in thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:32:58,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 13:33:56] 2025-10-29 12:33:02,531 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 13:33:56] 2025-10-29 12:33:50,274 | INFO     | [monitor] cgroup control has ended
[2025-10-29 13:33:56] 2025-10-29 12:33:51,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140319036979008)>', '<ExcThread(monitor, started 140317588190976)>']
[2025-10-29 13:33:56] 2025-10-29 12:33:51,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 13:33:56] 2025-10-29 12:33:51,653 | INFO     | [monitor] control thread has ended
[2025-10-29 13:33:56] 2025-10-29 12:33:56,476 | INFO     | all workflow threads have been joined
[2025-10-29 13:33:56] 2025-10-29 12:33:56,477 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 13:33:56] 2025-10-29 12:33:56,477 | INFO     | traces error code: 0
[2025-10-29 13:33:56] 2025-10-29 12:33:56,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 13:33:56] 2025-10-29 12:33:56,548 [wrapper] ==== pilot stdout END ====
[2025-10-29 13:33:56] 2025-10-29 12:33:56,553 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 13:33:56] 2025-10-29 12:33:56,557 [wrapper] pilotpid: 580672
[2025-10-29 13:33:56] 2025-10-29 12:33:56,560 [wrapper] Pilot exit status: 0
[2025-10-29 13:33:56] 2025-10-29 12:33:56,571 [wrapper] pandaids: 6864221275
[2025-10-29 13:33:56] 2025-10-29 12:33:56,595 [wrapper] cleanup supervisor_pilot  597931 580673
[2025-10-29 13:33:56] 2025-10-29 12:33:56,599 [wrapper] Test setup, not cleaning
[2025-10-29 13:33:56] 2025-10-29 12:33:56,603 [wrapper] apfmon messages muted
[2025-10-29 13:33:56] 2025-10-29 12:33:56,606 [wrapper] ==== wrapper stdout END ====
[2025-10-29 13:33:56] 2025-10-29 12:33:56,610 [wrapper] ==== wrapper stderr END ====
[2025-10-29 13:33:56]  *** Error codes and diagnostics ***
[2025-10-29 13:33:56]     "exeErrorCode": 0,
[2025-10-29 13:33:56]     "exeErrorDiag": "",
[2025-10-29 13:33:56]     "pilotErrorCode": 0,
[2025-10-29 13:33:56]     "pilotErrorDiag": "",
[2025-10-29 13:33:56]  *** Listing of results directory ***
[2025-10-29 13:33:56] total 386416
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc    557409 Oct 29 05:59 pilot3.tar.gz
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc      5112 Oct 29 06:12 queuedata.json
[2025-10-29 13:33:56] -rwx------ 1 boinc boinc     36292 Oct 29 06:12 runpilot2-wrapper.sh
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc       100 Oct 29 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 13:33:56] -rwxr-xr-x 1 boinc boinc      7986 Oct 29 12:30 run_atlas
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc       105 Oct 29 12:30 job.xml
[2025-10-29 13:33:56] -rw-r--r-- 2 boinc boinc 213220420 Oct 29 12:30 EVNT.47081487._000150.pool.root.1
[2025-10-29 13:33:56] -rw-r--r-- 2 boinc boinc    569678 Oct 29 12:30 input.tar.gz
[2025-10-29 13:33:56] -rw-r--r-- 2 boinc boinc     15120 Oct 29 12:30 start_atlas.sh
[2025-10-29 13:33:56] drwxrwx--x 2 boinc boinc      4096 Oct 29 12:30 shared
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc         0 Oct 29 12:30 boinc_setup_complete
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc      6373 Oct 29 12:30 init_data.xml
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc         0 Oct 29 12:30 boinc_lockfile
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc      2524 Oct 29 12:30 pandaJob.out
[2025-10-29 13:33:56] -rw------- 1 boinc boinc    982980 Oct 29 12:30 agis_schedconf.cvmfs.json
[2025-10-29 13:33:56] -rw------- 1 boinc boinc   1560632 Oct 29 12:30 agis_ddmendpoints.agis.ALL.json
[2025-10-29 13:33:56] drwx------ 5 boinc boinc      4096 Oct 29 12:30 pilot3
[2025-10-29 13:33:56] -rw------- 1 boinc boinc        95 Oct 29 13:32 pilot_heartbeat.json
[2025-10-29 13:33:56] -rw------- 1 boinc boinc 176962964 Oct 29 13:32 HITS.47081490._003987.pool.root.1
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc       529 Oct 29 13:32 boinc_task_state.xml
[2025-10-29 13:33:56] -rw------- 1 boinc boinc      1016 Oct 29 13:32 memory_monitor_summary.json
[2025-10-29 13:33:56] -rw------- 1 boinc boinc    237718 Oct 29 13:32 log.47081490._003987.job.log.tgz.1
[2025-10-29 13:33:56] -rw------- 1 boinc boinc      7760 Oct 29 13:32 heartbeat.json
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc        27 Oct 29 13:33 wrapper_checkpoint.txt
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc      8192 Oct 29 13:33 boinc_mmap_file
[2025-10-29 13:33:56] -rw------- 1 boinc boinc      4742 Oct 29 13:33 pilotlog.txt
[2025-10-29 13:33:56] -rw------- 1 boinc boinc    561037 Oct 29 13:33 log.47081490._003987.job.log.1
[2025-10-29 13:33:56] -rw------- 1 boinc boinc       357 Oct 29 13:33 output.list
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc       620 Oct 29 13:33 runtime_log
[2025-10-29 13:33:56] -rw------- 1 boinc boinc    819200 Oct 29 13:33 result.tar.gz
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc      8792 Oct 29 13:33 runtime_log.err
[2025-10-29 13:33:56] -rw------- 1 boinc boinc       661 Oct 29 13:33 AtZKDmBfDY8n9Rq4apOajLDm4fhM0noT9bVof3QYDmznnMDmfCpG9n.diag
[2025-10-29 13:33:56] -rw-r--r-- 1 boinc boinc     22194 Oct 29 13:33 stderr.txt
[2025-10-29 13:33:56] HITS file was successfully produced:
[2025-10-29 13:33:56] -rw------- 1 boinc boinc 176962964 Oct 29 13:32 shared/HITS.pool.root.1
[2025-10-29 13:33:56]  *** Contents of shared directory: ***
[2025-10-29 13:33:56] total 382424
[2025-10-29 13:33:56] -rw-r--r-- 2 boinc boinc 213220420 Oct 29 12:30 ATLAS.root_0
[2025-10-29 13:33:56] -rw-r--r-- 2 boinc boinc    569678 Oct 29 12:30 input.tar.gz
[2025-10-29 13:33:56] -rw-r--r-- 2 boinc boinc     15120 Oct 29 12:30 start_atlas.sh
[2025-10-29 13:33:56] -rw------- 1 boinc boinc 176962964 Oct 29 13:32 HITS.pool.root.1
[2025-10-29 13:33:56] -rw------- 1 boinc boinc    819200 Oct 29 13:33 result.tar.gz
13:33:57 (576885): run_atlas exited; CPU time 13954.983041
13:33:57 (576885): called boinc_finish(0)

</stderr_txt>
]]>

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