Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:27:56 (551127): wrapper (7.7.26015): starting
11:27:56 (551127): wrapper: running run_atlas (--nthreads 4)
[2025-10-29 11:27:56] Arguments: --nthreads 4
[2025-10-29 11:27:56] Threads: 4
[2025-10-29 11:27:56] Checking for CVMFS
[2025-10-29 11:27:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 11:27:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 11:27:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 11:27:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 11:27:56] 2.9.2.0 525847 63 49684 152261 0 56 32014182 36864000 0 130560 0 65372 99.983 4073 712 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-29 11:27:56] CVMFS is ok
[2025-10-29 11:27:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 11:27:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-29 11:27:56] Further information can be found at the LHC@home message board.
[2025-10-29 11:27:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 11:27:56] Checking for apptainer binary...
[2025-10-29 11:27:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 11:27:56] Running /usr/bin/apptainer --version
[2025-10-29 11:27:56] apptainer version 1.4.1-1.1
[2025-10-29 11:27:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 11:27:56] atlasA139
[2025-10-29 11:27:56] apptainer works
[2025-10-29 11:27:56] Set ATHENA_PROC_NUMBER=4
[2025-10-29 11:27:56] Set ATHENA_CORE_NUMBER=4
[2025-10-29 11:27:56] Starting ATLAS job with PandaID=6864230422
[2025-10-29 11:27:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 12:30:15]  *** The last 200 lines of the pilot log: ***
[2025-10-29 12:30:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-29 12:30:15]  replicas=None
[2025-10-29 12:30:15]  scope=mc23_13p6TeV
[2025-10-29 12:30:15]  status=None
[2025-10-29 12:30:15]  status_code=0
[2025-10-29 12:30:15]  storage_token=
[2025-10-29 12:30:15]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6864230422/log.47081490._006309.job.log.tgz.1
[2025-10-29 12:30:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/45/log.47081490._006309.job.log.tgz.1
[2025-10-29 12:30:15]  workdir=None
[2025-10-29 12:30:15] ]
[2025-10-29 12:30:15] 2025-10-29 11:29:26,056 | INFO     | transferring file log.47081490._006309.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6864230422/log.47081490._006309.job.log.tgz.1 to /local/data/boinc/
[2025-10-29 12:30:15] 2025-10-29 11:29:26,056 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6864230422/log.47081490._006309.job.log.tgz.1 /local/data/boinc/slots/0/log.47081490._0063
[2025-10-29 12:30:15] 2025-10-29 11:29:26,073 | INFO     | adding to output.list: log.47081490._006309.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/45/log.47081490._006309.job.log.tg
[2025-10-29 12:30:15] 2025-10-29 11:29:26,074 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-29 12:30:15] 2025-10-29 11:29:26,074 | INFO     | summary of transferred files:
[2025-10-29 12:30:15] 2025-10-29 11:29:26,074 | INFO     |  -- lfn=log.47081490._006309.job.log.tgz.1, status_code=0, status=transferred
[2025-10-29 12:30:15] 2025-10-29 11:29:26,074 | INFO     | stage-out finished correctly
[2025-10-29 12:30:15] 2025-10-29 11:29:26,112 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-29 12:30:15] 2025-10-29 11:29:26,662 | INFO     | monitor loop #284: job 0:6864230422 is in state 'finished'
[2025-10-29 12:30:15] 2025-10-29 11:29:26,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 12:30:15] 2025-10-29 11:29:26,746 | INFO     | time since job start (3682s) is within the limit (172800.0s)
[2025-10-29 12:30:15] 2025-10-29 11:29:28,509 | INFO     | job 6864230422 has state=finished
[2025-10-29 12:30:15] 2025-10-29 11:29:28,509 | INFO     | preparing for final server update for job 6864230422 in state='finished'
[2025-10-29 12:30:15] 2025-10-29 11:29:28,510 | INFO     | this job has now completed (state=finished)
[2025-10-29 12:30:15] 2025-10-29 11:29:28,510 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-29 12:30:15] 2025-10-29 11:29:28,510 | INFO     | log transfer has been attempted: DONE
[2025-10-29 12:30:15] 2025-10-29 11:29:28,510 | INFO     | job 6864230422 has finished - writing final server update
[2025-10-29 12:30:15] 2025-10-29 11:29:28,510 | INFO     | total number of processed events: 400 (read)
[2025-10-29 12:30:15] 2025-10-29 11:29:28,511 | INFO     | executing command: lscpu
[2025-10-29 12:30:15] 2025-10-29 11:29:28,532 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-29 12:30:15] 2025-10-29 11:29:28,752 | INFO     | time since job start (3684s) is within the limit (172800.0s)
[2025-10-29 12:30:15] 2025-10-29 11:29:29,165 | INFO     | monitor loop #285: job 0:6864230422 is in state 'finished'
[2025-10-29 12:30:15] 2025-10-29 11:29:29,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 12:30:15] 2025-10-29 11:29:30,757 | INFO     | time since job start (3686s) is within the limit (172800.0s)
[2025-10-29 12:30:15] 2025-10-29 11:29:31,668 | INFO     | monitor loop #286: job 0:6864230422 is in state 'finished'
[2025-10-29 12:30:15] 2025-10-29 11:29:31,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 12:30:15] 2025-10-29 11:29:31,805 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-29 12:30:15] 2025-10-29 11:29:31,807 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3167.6723125000003
[2025-10-29 12:30:15] 2025-10-29 11:29:31,808 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6864230422/memory_monitor_summary.json (trf name=prmon)
[2025-10-29 12:30:15] 2025-10-29 11:29:31,809 | INFO     | extracted standard info from prmon json
[2025-10-29 12:30:15] 2025-10-29 11:29:31,809 | INFO     | extracted standard memory fields from prmon json
[2025-10-29 12:30:15] 2025-10-29 11:29:31,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-29 12:30:15] 2025-10-29 11:29:31,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-29 12:30:15] 2025-10-29 11:29:31,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | fitting pss+swap vs Time
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | sum of square deviations: 46147842.0
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | sum of deviations: -5449386322.0
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | mean x: 1761735598.0
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | mean y: 2572976.396226415
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | -- intersect: 208037823481.10434
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | intersect: 208037823481.10434
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | chi2: 0.05738280152751344
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | -- intersect: 208037823481.10434
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | current memory leak: -118.09 B/s (using 53 data points, chi2=0.06)
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | could have reported an average CPU frequency of 3581 MHz (6 samples)
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | ..............................
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | . Timing measurements:
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | . get job = 0 s
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | . initial setup = 1 s
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | . payload setup = 4 s
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | . stage-in = 0 s
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | . payload execution = 3659 s
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | . stage-out = 0 s
[2025-10-29 12:30:15] 2025-10-29 11:29:31,810 | INFO     | . log creation = 0 s
[2025-10-29 12:30:15] 2025-10-29 11:29:31,811 | INFO     | ..............................
[2025-10-29 12:30:15] 2025-10-29 11:29:31,850 | INFO     | 
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | job summary report
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | --------------------------------------------------
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | PanDA job id: 6864230422
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | task id: 47081490
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | errors: (none)
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | pilot state: finished 
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | transexitcode: 0
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | exeerrorcode: 0
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | exeerrordiag: 
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | exitcode: 0
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | exitmsg: OK
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | cpuconsumptiontime: 13797 s
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | nevents: 400
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | neventsw: 0
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | pid: 561502
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | pgrp: 561502
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | corecount: 4
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | event service: False
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | sizes: {0: 2348885, 4: 2349147, 11: 2349175, 3667: 2384041, 3673: 2384179}
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | --------------------------------------------------
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | 
[2025-10-29 12:30:15] 2025-10-29 11:29:31,851 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-29 12:30:15] 2025-10-29 11:29:31,869 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,869 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,869 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,869 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,869 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,869 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,869 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | job 6864230422 has completed (purged errors)
[2025-10-29 12:30:15] 2025-10-29 11:29:31,870 | INFO     | overall cleanup function is called
[2025-10-29 12:30:15] 2025-10-29 11:29:32,877 | INFO     | --- collectZombieJob: --- 10, [561502]
[2025-10-29 12:30:15] 2025-10-29 11:29:32,877 | INFO     | zombie collector waiting for pid 561502
[2025-10-29 12:30:15] 2025-10-29 11:29:32,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-29 12:30:15] 2025-10-29 11:29:32,877 | INFO     | collected zombie processes
[2025-10-29 12:30:15] 2025-10-29 11:29:32,877 | INFO     | will attempt to kill all subprocesses of pid=561502
[2025-10-29 12:30:15] 2025-10-29 11:29:32,925 | INFO     | process IDs to be killed: [561502] (in reverse order)
[2025-10-29 12:30:15] 2025-10-29 11:29:32,959 | WARNING  | found no corresponding commands to process id(s)
[2025-10-29 12:30:15] 2025-10-29 11:29:32,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-29 12:30:15] 2025-10-29 11:29:32,961 | INFO     | did not find any defunct processes belonging to 561502
[2025-10-29 12:30:15] 2025-10-29 11:29:32,962 | INFO     | did not find any defunct processes belonging to 561502
[2025-10-29 12:30:15] 2025-10-29 11:29:32,962 | INFO     | ready for new job
[2025-10-29 12:30:15] 2025-10-29 11:29:32,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-29 12:30:15] 2025-10-29 11:29:32,963 | INFO     | ***************************************
[2025-10-29 12:30:15] 2025-10-29 11:29:32,963 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-29 12:30:15] 2025-10-29 11:29:32,963 | INFO     | ***************************************
[2025-10-29 12:30:15] 2025-10-29 11:29:32,963 | INFO     | 
[2025-10-29 12:30:15] 2025-10-29 11:29:32,964 | INFO     | architecture information:
[2025-10-29 12:30:15] 2025-10-29 11:29:32,964 | INFO     | executing command: cat /etc/os-release
[2025-10-29 12:30:15] 2025-10-29 11:29:32,977 | INFO     | cat /etc/os-release:
[2025-10-29 12:30:15] NAME="CentOS Linux"
[2025-10-29 12:30:15] VERSION="7 (Core)"
[2025-10-29 12:30:15] ID="centos"
[2025-10-29 12:30:15] ID_LIKE="rhel fedora"
[2025-10-29 12:30:15] VERSION_ID="7"
[2025-10-29 12:30:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-29 12:30:15] ANSI_COLOR="0;31"
[2025-10-29 12:30:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-29 12:30:15] HOME_URL="https://www.centos.org/"
[2025-10-29 12:30:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-29 12:30:15] 
[2025-10-29 12:30:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-29 12:30:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-29 12:30:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-29 12:30:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-29 12:30:15] 
[2025-10-29 12:30:15] 2025-10-29 11:29:32,977 | INFO     | ***************************************
[2025-10-29 12:30:15] 2025-10-29 11:29:33,481 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-29 12:30:15] 2025-10-29 11:29:33,499 | INFO     | sufficient remaining disk space (328893202432 B)
[2025-10-29 12:30:15] 2025-10-29 11:29:33,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-29 12:30:15] 2025-10-29 11:29:33,499 | INFO     | current server update state: UPDATING_FINAL
[2025-10-29 12:30:15] 2025-10-29 11:29:33,499 | INFO     | update_server=False
[2025-10-29 12:30:15] 2025-10-29 11:29:33,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-29 12:30:15] 2025-10-29 11:29:33,499 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-29 12:30:15] 2025-10-29 11:29:33,499 | INFO     | aborting loop
[2025-10-29 12:30:15] 2025-10-29 11:29:33,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-29 12:30:15] 2025-10-29 11:29:33,929 | INFO     | all job control threads have been joined
[2025-10-29 12:30:15] 2025-10-29 11:29:34,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 12:30:15] 2025-10-29 11:29:34,428 | INFO     | all data control threads have been joined
[2025-10-29 12:30:15] 2025-10-29 11:29:34,505 | INFO     | [job] retrieve thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:34,505 | INFO     | [job] job monitor thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:34,506 | INFO     | [job] queue monitor thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:34,737 | INFO     | [payload] validate_post thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:34,861 | INFO     | [payload] failed_post thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:34,896 | INFO     | all payload control threads have been joined
[2025-10-29 12:30:15] 2025-10-29 11:29:34,935 | INFO     | [job] control thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:34,963 | INFO     | [job] validate thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:35,072 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:35,116 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:35,434 | INFO     | [data] control thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:35,697 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:35,872 | INFO     | [data] copytool_in thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:35,902 | INFO     | [payload] control thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:36,130 | INFO     | [data] copytool_out thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:36,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 12:30:15] 2025-10-29 11:29:40,667 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:29:44,266 | INFO     | job.realtimelogging is not enabled
[2025-10-29 12:30:15] 2025-10-29 11:29:45,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 12:30:15] 2025-10-29 11:30:03,904 | INFO     | PID=554938 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-29 12:30:15] 2025-10-29 11:30:03,904 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 12:30:15] 2025-10-29 11:30:03,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 12:30:15] 2025-10-29 11:30:03,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 12:30:15] 2025-10-29 11:30:09,444 | INFO     | [monitor] cgroup control has ended
[2025-10-29 12:30:15] 2025-10-29 11:30:09,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664950990656)>', '<ExcThread(monitor, started 139664434370304)>']
[2025-10-29 12:30:15] 2025-10-29 11:30:09,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 12:30:15] 2025-10-29 11:30:09,936 | INFO     | [monitor] control thread has ended
[2025-10-29 12:30:15] 2025-10-29 11:30:14,837 | INFO     | all workflow threads have been joined
[2025-10-29 12:30:15] 2025-10-29 11:30:14,837 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 12:30:15] 2025-10-29 11:30:14,837 | INFO     | traces error code: 0
[2025-10-29 12:30:15] 2025-10-29 11:30:14,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 12:30:15] 2025-10-29 11:30:14,907 [wrapper] ==== pilot stdout END ====
[2025-10-29 12:30:15] 2025-10-29 11:30:14,911 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 12:30:15] 2025-10-29 11:30:14,915 [wrapper] pilotpid: 554938
[2025-10-29 12:30:15] 2025-10-29 11:30:14,920 [wrapper] Pilot exit status: 0
[2025-10-29 12:30:15] 2025-10-29 11:30:14,931 [wrapper] pandaids: 6864230422
[2025-10-29 12:30:15] 2025-10-29 11:30:14,953 [wrapper] cleanup supervisor_pilot  571984 554939
[2025-10-29 12:30:15] 2025-10-29 11:30:14,957 [wrapper] Test setup, not cleaning
[2025-10-29 12:30:15] 2025-10-29 11:30:14,961 [wrapper] apfmon messages muted
[2025-10-29 12:30:15] 2025-10-29 11:30:14,964 [wrapper] ==== wrapper stdout END ====
[2025-10-29 12:30:15] 2025-10-29 11:30:14,968 [wrapper] ==== wrapper stderr END ====
[2025-10-29 12:30:15]  *** Error codes and diagnostics ***
[2025-10-29 12:30:15]     "exeErrorCode": 0,
[2025-10-29 12:30:15]     "exeErrorDiag": "",
[2025-10-29 12:30:15]     "pilotErrorCode": 0,
[2025-10-29 12:30:15]     "pilotErrorDiag": "",
[2025-10-29 12:30:15]  *** Listing of results directory ***
[2025-10-29 12:30:15] total 380724
[2025-10-29 12:30:15] -rwx------ 1 boinc boinc     36292 Oct 29 06:31 runpilot2-wrapper.sh
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc      5112 Oct 29 06:31 queuedata.json
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc    557409 Oct 29 06:31 pilot3.tar.gz
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc       100 Oct 29 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 12:30:15] -rwxr-xr-x 1 boinc boinc      7986 Oct 29 11:27 run_atlas
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc       105 Oct 29 11:27 job.xml
[2025-10-29 12:30:15] -rw-r--r-- 2 boinc boinc 213886625 Oct 29 11:27 EVNT.47081487._000242.pool.root.1
[2025-10-29 12:30:15] drwxrwx--x 2 boinc boinc      4096 Oct 29 11:27 shared
[2025-10-29 12:30:15] -rw-r--r-- 2 boinc boinc    569662 Oct 29 11:27 input.tar.gz
[2025-10-29 12:30:15] -rw-r--r-- 2 boinc boinc     15120 Oct 29 11:27 start_atlas.sh
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc         0 Oct 29 11:27 boinc_setup_complete
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc      6373 Oct 29 11:27 init_data.xml
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc         0 Oct 29 11:27 boinc_lockfile
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc      2524 Oct 29 11:27 pandaJob.out
[2025-10-29 12:30:15] -rw------- 1 boinc boinc    979122 Oct 29 11:28 agis_schedconf.cvmfs.json
[2025-10-29 12:30:15] -rw------- 1 boinc boinc   1560632 Oct 29 11:28 agis_ddmendpoints.agis.ALL.json
[2025-10-29 12:30:15] drwx------ 5 boinc boinc      4096 Oct 29 11:28 pilot3
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc       529 Oct 29 12:29 boinc_task_state.xml
[2025-10-29 12:30:15] -rw------- 1 boinc boinc 170424224 Oct 29 12:29 HITS.47081490._006309.pool.root.1
[2025-10-29 12:30:15] -rw------- 1 boinc boinc      1017 Oct 29 12:29 memory_monitor_summary.json
[2025-10-29 12:30:15] -rw------- 1 boinc boinc        95 Oct 29 12:29 pilot_heartbeat.json
[2025-10-29 12:30:15] -rw------- 1 boinc boinc    266073 Oct 29 12:29 log.47081490._006309.job.log.tgz.1
[2025-10-29 12:30:15] -rw------- 1 boinc boinc      7765 Oct 29 12:29 heartbeat.json
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc        27 Oct 29 12:30 wrapper_checkpoint.txt
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc      8192 Oct 29 12:30 boinc_mmap_file
[2025-10-29 12:30:15] -rw------- 1 boinc boinc      4823 Oct 29 12:30 pilotlog.txt
[2025-10-29 12:30:15] -rw------- 1 boinc boinc    554803 Oct 29 12:30 log.47081490._006309.job.log.1
[2025-10-29 12:30:15] -rw------- 1 boinc boinc       357 Oct 29 12:30 output.list
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc       620 Oct 29 12:30 runtime_log
[2025-10-29 12:30:15] -rw------- 1 boinc boinc    839680 Oct 29 12:30 result.tar.gz
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc      8792 Oct 29 12:30 runtime_log.err
[2025-10-29 12:30:15] -rw------- 1 boinc boinc       661 Oct 29 12:30 b9VNDmtxDY8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaiFODmZ8Bhwn.diag
[2025-10-29 12:30:15] -rw-r--r-- 1 boinc boinc     21810 Oct 29 12:30 stderr.txt
[2025-10-29 12:30:15] HITS file was successfully produced:
[2025-10-29 12:30:15] -rw------- 1 boinc boinc 170424224 Oct 29 12:29 shared/HITS.pool.root.1
[2025-10-29 12:30:15]  *** Contents of shared directory: ***
[2025-10-29 12:30:15] total 376712
[2025-10-29 12:30:15] -rw-r--r-- 2 boinc boinc 213886625 Oct 29 11:27 ATLAS.root_0
[2025-10-29 12:30:15] -rw-r--r-- 2 boinc boinc    569662 Oct 29 11:27 input.tar.gz
[2025-10-29 12:30:15] -rw-r--r-- 2 boinc boinc     15120 Oct 29 11:27 start_atlas.sh
[2025-10-29 12:30:15] -rw------- 1 boinc boinc 170424224 Oct 29 12:29 HITS.pool.root.1
[2025-10-29 12:30:15] -rw------- 1 boinc boinc    839680 Oct 29 12:30 result.tar.gz
12:30:16 (551127): run_atlas exited; CPU time 13806.552684
12:30:16 (551127): called boinc_finish(0)

</stderr_txt>
]]>

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