Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:46:13 (1328589): wrapper (7.7.26015): starting
12:46:13 (1328589): wrapper: running run_atlas (--nthreads 2)
[2025-10-29 12:46:13] Arguments: --nthreads 2
[2025-10-29 12:46:13] Threads: 2
[2025-10-29 12:46:13] Checking for CVMFS
[2025-10-29 12:46:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 12:46:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 12:46:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 12:46:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 12:46:13] 2.9.2.0 1164764 688 54332 152263 1 57 28001833 36864001 0 130560 0 428120 99.986 26659 1293 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-29 12:46:13] CVMFS is ok
[2025-10-29 12:46:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 12:46:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-29 12:46:13] Further information can be found at the LHC@home message board.
[2025-10-29 12:46:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 12:46:13] Checking for apptainer binary...
[2025-10-29 12:46:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 12:46:13] Running /usr/bin/apptainer --version
[2025-10-29 12:46:13] apptainer version 1.4.1-1.1
[2025-10-29 12:46:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 12:46:13] thA354
[2025-10-29 12:46:13] apptainer works
[2025-10-29 12:46:13] Set ATHENA_PROC_NUMBER=2
[2025-10-29 12:46:13] Set ATHENA_CORE_NUMBER=2
[2025-10-29 12:46:13] Starting ATLAS job with PandaID=6864335289
[2025-10-29 12:46:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 14:40:04]  *** The last 200 lines of the pilot log: ***
[2025-10-29 14:40:04] 2025-10-29 13:39:31,584 | INFO     | monitor loop #521: job 0:6864335289 is in state 'finished'
[2025-10-29 14:40:04] 2025-10-29 13:39:31,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 14:40:04] 2025-10-29 13:39:32,223 | INFO     | PID=1332301 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-29 14:40:04] 2025-10-29 13:39:32,769 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-29 14:40:04] 2025-10-29 13:39:32,770 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4200.81125
[2025-10-29 14:40:04] 2025-10-29 13:39:32,771 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6864335289/memory_monitor_summary.json (trf name=prmon)
[2025-10-29 14:40:04] 2025-10-29 13:39:32,771 | INFO     | extracted standard info from prmon json
[2025-10-29 14:40:04] 2025-10-29 13:39:32,771 | INFO     | extracted standard memory fields from prmon json
[2025-10-29 14:40:04] 2025-10-29 13:39:32,771 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-29 14:40:04] 2025-10-29 13:39:32,771 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-29 14:40:04] 2025-10-29 13:39:32,771 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-29 14:40:04] 2025-10-29 13:39:32,772 | INFO     | fitting pss+swap vs Time
[2025-10-29 14:40:04] 2025-10-29 13:39:32,772 | INFO     | sum of square deviations: 424045160.0
[2025-10-29 14:40:04] 2025-10-29 13:39:32,772 | INFO     | sum of deviations: -4945983882.999998
[2025-10-29 14:40:04] 2025-10-29 13:39:32,772 | INFO     | mean x: 1761741771.0
[2025-10-29 14:40:04] 2025-10-29 13:39:32,772 | INFO     | mean y: 2314701.396396396
[2025-10-29 14:40:04] 2025-10-29 13:39:32,772 | INFO     | -- intersect: 20550943072.426205
[2025-10-29 14:40:04] 2025-10-29 13:39:32,772 | INFO     | intersect: 20550943072.426205
[2025-10-29 14:40:04] 2025-10-29 13:39:32,772 | INFO     | chi2: 1.6382587993348103
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | sum of square deviations: 369281342.5
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | sum of deviations: -4470994511.999996
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | mean x: 1761741618.5
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | mean y: 2316024.754716981
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | -- intersect: 21332224149.954655
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | intersect: 21332224149.954655
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | chi2: 1.6369131602910751
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | current chi2=1.6369131602910751 (change=0.082138368143151 %)
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | right removable region: 105
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | sum of square deviations: 369281342.5
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | sum of deviations: -17182328903.0
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | mean x: 1761741923.5
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | mean y: 2347721.037735849
[2025-10-29 14:40:04] 2025-10-29 13:39:32,773 | INFO     | -- intersect: 81974615712.83553
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | intersect: 81974615712.83553
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | chi2: 0.22050826190041695
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | current chi2=0.22050826190041695 (change=86.54008377736466 %)
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | sum of square deviations: 319447850.0
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | sum of deviations: -11947073870.0
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | mean x: 1761742076.0
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | mean y: 2331682.089108911
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | -- intersect: 65889964739.75143
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | intersect: 65889964739.75143
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | chi2: 0.19020593875343944
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | current chi2=0.19020593875343944 (change=13.742035280592907 %)
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | left removable region: 20
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | sum of square deviations: 190403570.0
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | sum of deviations: -974634088.0
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | mean x: 1761742198.0
[2025-10-29 14:40:04] 2025-10-29 13:39:32,774 | INFO     | mean y: 2293322.2352941176
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | -- intersect: 9020264993.873833
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | intersect: 9020264993.873833
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | chi2: 0.03072726956096505
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | -- intersect: 9020264993.873833
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | current memory leak: -5.12 B/s (using 85 data points, chi2=0.03)
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | could have reported an average CPU frequency of 4261 MHz (7 samples)
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | ..............................
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | . Timing measurements:
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | . get job = 0 s
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | . initial setup = 1 s
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | . payload setup = 8 s
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | . stage-in = 0 s
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | . payload execution = 6746 s
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | . stage-out = 0 s
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | . log creation = 0 s
[2025-10-29 14:40:04] 2025-10-29 13:39:32,775 | INFO     | ..............................
[2025-10-29 14:40:04] 2025-10-29 13:39:33,169 | INFO     | 
[2025-10-29 14:40:04] 2025-10-29 13:39:33,169 | INFO     | job summary report
[2025-10-29 14:40:04] 2025-10-29 13:39:33,169 | INFO     | --------------------------------------------------
[2025-10-29 14:40:04] 2025-10-29 13:39:33,169 | INFO     | PanDA job id: 6864335289
[2025-10-29 14:40:04] 2025-10-29 13:39:33,169 | INFO     | task id: 47081490
[2025-10-29 14:40:04] 2025-10-29 13:39:33,169 | INFO     | errors: (none)
[2025-10-29 14:40:04] 2025-10-29 13:39:33,169 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-29 14:40:04] 2025-10-29 13:39:33,169 | INFO     | pilot state: finished 
[2025-10-29 14:40:04] 2025-10-29 13:39:33,169 | INFO     | transexitcode: 0
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | exeerrorcode: 0
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | exeerrordiag: 
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | exitcode: 0
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | exitmsg: OK
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | cpuconsumptiontime: 13152 s
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | nevents: 400
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | neventsw: 0
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | pid: 1338712
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | pgrp: 1338712
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | corecount: 2
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | event service: False
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | sizes: {0: 2348886, 7: 2349148, 11: 2349176, 6757: 2376474, 6758: 2385478, 6760: 2385534, 6768: 2385856}
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | --------------------------------------------------
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | 
[2025-10-29 14:40:04] 2025-10-29 13:39:33,170 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-29 14:40:04] 2025-10-29 13:39:33,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | job 6864335289 has completed (purged errors)
[2025-10-29 14:40:04] 2025-10-29 13:39:33,181 | INFO     | overall cleanup function is called
[2025-10-29 14:40:04] 2025-10-29 13:39:34,188 | INFO     | --- collectZombieJob: --- 10, [1338712]
[2025-10-29 14:40:04] 2025-10-29 13:39:34,188 | INFO     | zombie collector waiting for pid 1338712
[2025-10-29 14:40:04] 2025-10-29 13:39:34,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-29 14:40:04] 2025-10-29 13:39:34,188 | INFO     | collected zombie processes
[2025-10-29 14:40:04] 2025-10-29 13:39:34,189 | INFO     | will attempt to kill all subprocesses of pid=1338712
[2025-10-29 14:40:04] 2025-10-29 13:39:34,225 | INFO     | process IDs to be killed: [1338712] (in reverse order)
[2025-10-29 14:40:04] 2025-10-29 13:39:34,248 | WARNING  | found no corresponding commands to process id(s)
[2025-10-29 14:40:04] 2025-10-29 13:39:34,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-29 14:40:04] 2025-10-29 13:39:34,252 | INFO     | did not find any defunct processes belonging to 1338712
[2025-10-29 14:40:04] 2025-10-29 13:39:34,256 | INFO     | did not find any defunct processes belonging to 1338712
[2025-10-29 14:40:04] 2025-10-29 13:39:34,257 | INFO     | ready for new job
[2025-10-29 14:40:04] 2025-10-29 13:39:34,257 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-29 14:40:04] 2025-10-29 13:39:34,259 | INFO     | ***************************************
[2025-10-29 14:40:04] 2025-10-29 13:39:34,259 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-29 14:40:04] 2025-10-29 13:39:34,259 | INFO     | ***************************************
[2025-10-29 14:40:04] 2025-10-29 13:39:34,260 | INFO     | 
[2025-10-29 14:40:04] 2025-10-29 13:39:34,261 | INFO     | architecture information:
[2025-10-29 14:40:04] 2025-10-29 13:39:34,261 | INFO     | executing command: cat /etc/os-release
[2025-10-29 14:40:04] 2025-10-29 13:39:34,284 | INFO     | cat /etc/os-release:
[2025-10-29 14:40:04] NAME="CentOS Linux"
[2025-10-29 14:40:04] VERSION="7 (Core)"
[2025-10-29 14:40:04] ID="centos"
[2025-10-29 14:40:04] ID_LIKE="rhel fedora"
[2025-10-29 14:40:04] VERSION_ID="7"
[2025-10-29 14:40:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-29 14:40:04] ANSI_COLOR="0;31"
[2025-10-29 14:40:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-29 14:40:04] HOME_URL="https://www.centos.org/"
[2025-10-29 14:40:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-29 14:40:04] 
[2025-10-29 14:40:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-29 14:40:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-29 14:40:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-29 14:40:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-29 14:40:04] 
[2025-10-29 14:40:04] 2025-10-29 13:39:34,285 | INFO     | ***************************************
[2025-10-29 14:40:04] 2025-10-29 13:39:34,788 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-29 14:40:04] 2025-10-29 13:39:34,800 | INFO     | sufficient remaining disk space (496517513216 B)
[2025-10-29 14:40:04] 2025-10-29 13:39:34,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-29 14:40:04] 2025-10-29 13:39:34,801 | INFO     | current server update state: UPDATING_FINAL
[2025-10-29 14:40:04] 2025-10-29 13:39:34,801 | INFO     | update_server=False
[2025-10-29 14:40:04] 2025-10-29 13:39:34,801 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-29 14:40:04] 2025-10-29 13:39:34,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-29 14:40:04] 2025-10-29 13:39:35,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-29 14:40:04] 2025-10-29 13:39:35,092 | INFO     | aborting loop
[2025-10-29 14:40:04] 2025-10-29 13:39:35,301 | INFO     | all payload control threads have been joined
[2025-10-29 14:40:04] 2025-10-29 13:39:35,618 | INFO     | all data control threads have been joined
[2025-10-29 14:40:04] 2025-10-29 13:39:35,806 | INFO     | [job] queue monitor thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:35,807 | INFO     | [job] retrieve thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:35,981 | INFO     | [payload] failed_post thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:36,022 | INFO     | all job control threads have been joined
[2025-10-29 14:40:04] 2025-10-29 13:39:36,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 14:40:04] 2025-10-29 13:39:36,095 | INFO     | [job] job monitor thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:36,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 14:40:04] 2025-10-29 13:39:36,306 | INFO     | [payload] control thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:36,565 | INFO     | [payload] validate_post thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:36,620 | INFO     | [data] control thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:37,028 | INFO     | [job] control thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:37,063 | INFO     | [data] copytool_in thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:37,111 | INFO     | [job] validate thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:37,134 | INFO     | [monitor] cgroup control has ended
[2025-10-29 14:40:04] 2025-10-29 13:39:37,163 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:37,197 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:37,302 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:38,054 | INFO     | [data] copytool_out thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:40,146 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:45,457 | INFO     | job.realtimelogging is not enabled
[2025-10-29 14:40:04] 2025-10-29 13:39:46,462 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 14:40:04] 2025-10-29 13:39:47,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673704572736)>', '<ExcThread(monitor, started 140672963163904)>']
[2025-10-29 14:40:04] 2025-10-29 13:39:52,352 | INFO     | all workflow threads have been joined
[2025-10-29 14:40:04] 2025-10-29 13:39:52,353 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 14:40:04] 2025-10-29 13:39:52,353 | INFO     | traces error code: 0
[2025-10-29 14:40:04] 2025-10-29 13:39:52,354 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 14:40:04] 2025-10-29 13:40:04,319 | INFO     | PID=1332301 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-29 14:40:04] 2025-10-29 13:40:04,320 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 14:40:04] 2025-10-29 13:40:04,320 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 14:40:04] 2025-10-29 13:40:04,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 14:40:04] 2025-10-29 13:40:04,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 14:40:04] 2025-10-29 13:40:04,320 | INFO     | [monitor] control thread has ended
[2025-10-29 14:40:04] 2025-10-29 13:40:04,360 [wrapper] ==== pilot stdout END ====
[2025-10-29 14:40:04] 2025-10-29 13:40:04,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 14:40:04] 2025-10-29 13:40:04,365 [wrapper] pilotpid: 1332301
[2025-10-29 14:40:04] 2025-10-29 13:40:04,367 [wrapper] Pilot exit status: 0
[2025-10-29 14:40:04] 2025-10-29 13:40:04,373 [wrapper] pandaids: 6864335289
[2025-10-29 14:40:04] 2025-10-29 13:40:04,385 [wrapper] cleanup supervisor_pilot 1353692 1332302
[2025-10-29 14:40:04] 2025-10-29 13:40:04,388 [wrapper] Test setup, not cleaning
[2025-10-29 14:40:04] 2025-10-29 13:40:04,390 [wrapper] apfmon messages muted
[2025-10-29 14:40:04] 2025-10-29 13:40:04,392 [wrapper] ==== wrapper stdout END ====
[2025-10-29 14:40:04] 2025-10-29 13:40:04,394 [wrapper] ==== wrapper stderr END ====
[2025-10-29 14:40:04]  *** Error codes and diagnostics ***
[2025-10-29 14:40:04]     "exeErrorCode": 0,
[2025-10-29 14:40:04]     "exeErrorDiag": "",
[2025-10-29 14:40:04]     "pilotErrorCode": 0,
[2025-10-29 14:40:04]     "pilotErrorDiag": "",
[2025-10-29 14:40:04]  *** Listing of results directory ***
[2025-10-29 14:40:04] total 386788
[2025-10-29 14:40:04] -rwx------ 1 boinc boinc     36292 Oct 29 07:14 runpilot2-wrapper.sh
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc    557409 Oct 29 07:14 pilot3.tar.gz
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc      5112 Oct 29 07:15 queuedata.json
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc       100 Oct 29 12:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 14:40:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 29 12:46 run_atlas
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc       105 Oct 29 12:46 job.xml
[2025-10-29 14:40:04] -rw-r--r-- 2 boinc boinc 214946587 Oct 29 12:46 EVNT.47081487._000299.pool.root.1
[2025-10-29 14:40:04] -rw-r--r-- 2 boinc boinc    569674 Oct 29 12:46 input.tar.gz
[2025-10-29 14:40:04] -rw-r--r-- 2 boinc boinc     15120 Oct 29 12:46 start_atlas.sh
[2025-10-29 14:40:04] drwxrwx--x 2 boinc boinc      4096 Oct 29 12:46 shared
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc         0 Oct 29 12:46 boinc_setup_complete
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc      6205 Oct 29 12:46 init_data.xml
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc         0 Oct 29 12:46 boinc_lockfile
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc      2525 Oct 29 12:46 pandaJob.out
[2025-10-29 14:40:04] -rw------- 1 boinc boinc    982980 Oct 29 12:46 agis_schedconf.cvmfs.json
[2025-10-29 14:40:04] -rw------- 1 boinc boinc   1560632 Oct 29 12:46 agis_ddmendpoints.agis.ALL.json
[2025-10-29 14:40:04] drwx------ 5 boinc boinc      4096 Oct 29 12:46 pilot3
[2025-10-29 14:40:04] -rw------- 1 boinc boinc 174697569 Oct 29 14:39 HITS.47081490._007722.pool.root.1
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc       529 Oct 29 14:39 boinc_task_state.xml
[2025-10-29 14:40:04] -rw------- 1 boinc boinc      1025 Oct 29 14:39 memory_monitor_summary.json
[2025-10-29 14:40:04] -rw------- 1 boinc boinc    275610 Oct 29 14:39 log.47081490._007722.job.log.tgz.1
[2025-10-29 14:40:04] -rw------- 1 boinc boinc      7745 Oct 29 14:39 heartbeat.json
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc        27 Oct 29 14:39 wrapper_checkpoint.txt
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc      8192 Oct 29 14:39 boinc_mmap_file
[2025-10-29 14:40:04] -rw------- 1 boinc boinc       747 Oct 29 14:40 pilotlog.txt
[2025-10-29 14:40:04] -rw------- 1 boinc boinc        95 Oct 29 14:40 pilot_heartbeat.json
[2025-10-29 14:40:04] -rw------- 1 boinc boinc    980107 Oct 29 14:40 log.47081490._007722.job.log.1
[2025-10-29 14:40:04] -rw------- 1 boinc boinc       357 Oct 29 14:40 output.list
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc       620 Oct 29 14:40 runtime_log
[2025-10-29 14:40:04] -rw------- 1 boinc boinc   1280000 Oct 29 14:40 result.tar.gz
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc      8777 Oct 29 14:40 runtime_log.err
[2025-10-29 14:40:04] -rw------- 1 boinc boinc       660 Oct 29 14:40 KaoLDmtcEY8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpwFODmrgy93n.diag
[2025-10-29 14:40:04] -rw-r--r-- 1 boinc boinc     21174 Oct 29 14:40 stderr.txt
[2025-10-29 14:40:04] HITS file was successfully produced:
[2025-10-29 14:40:04] -rw------- 1 boinc boinc 174697569 Oct 29 14:39 shared/HITS.pool.root.1
[2025-10-29 14:40:04]  *** Contents of shared directory: ***
[2025-10-29 14:40:04] total 382352
[2025-10-29 14:40:04] -rw-r--r-- 2 boinc boinc 214946587 Oct 29 12:46 ATLAS.root_0
[2025-10-29 14:40:04] -rw-r--r-- 2 boinc boinc    569674 Oct 29 12:46 input.tar.gz
[2025-10-29 14:40:04] -rw-r--r-- 2 boinc boinc     15120 Oct 29 12:46 start_atlas.sh
[2025-10-29 14:40:04] -rw------- 1 boinc boinc 174697569 Oct 29 14:39 HITS.pool.root.1
[2025-10-29 14:40:04] -rw------- 1 boinc boinc   1280000 Oct 29 14:40 result.tar.gz
14:40:06 (1328589): run_atlas exited; CPU time 13183.707776
14:40:06 (1328589): called boinc_finish(0)

</stderr_txt>
]]>

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