Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:38:08 (2651275): wrapper (7.7.26015): starting
02:38:08 (2651275): wrapper: running run_atlas (--nthreads 8)
[2025-10-29 02:38:08] Arguments: --nthreads 8
[2025-10-29 02:38:08] Threads: 8
[2025-10-29 02:38:08] Checking for CVMFS
[2025-10-29 02:38:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 02:38:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 02:38:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 02:38:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 02:38:10] 2.13.2.0 7534 101466 115616 152255 2 460 22035195 40960000 33583 16776704 0 659401795 99.781 369196234 45277 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-29 02:38:10] CVMFS is ok
[2025-10-29 02:38:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 02:38:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-29 02:38:10] Further information can be found at the LHC@home message board.
[2025-10-29 02:38:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 02:38:10] Checking for apptainer binary...
[2025-10-29 02:38:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 02:38:10] Running /usr/bin/apptainer --version
[2025-10-29 02:38:10] apptainer version 1.4.3-1.el9
[2025-10-29 02:38:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 02:38:10] c-208-39.aglt2.org
[2025-10-29 02:38:10] apptainer works
[2025-10-29 02:38:10] Set ATHENA_PROC_NUMBER=8
[2025-10-29 02:38:10] Set ATHENA_CORE_NUMBER=8
[2025-10-29 02:38:11] Starting ATLAS job with PandaID=6853142448
[2025-10-29 02:38:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 04:12:40]  *** The last 200 lines of the pilot log: ***
[2025-10-29 04:12:40] 2025-10-29 08:11:24,155 | INFO     | time since job start (5521s) is within the limit (172800.0s)
[2025-10-29 04:12:40] 2025-10-29 08:11:24,780 | INFO     | monitor loop #362: job 0:6853142448 is in state 'finished'
[2025-10-29 04:12:40] 2025-10-29 08:11:24,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 04:12:40] 2025-10-29 08:11:26,162 | INFO     | time since job start (5523s) is within the limit (172800.0s)
[2025-10-29 04:12:40] 2025-10-29 08:11:27,285 | INFO     | monitor loop #363: job 0:6853142448 is in state 'finished'
[2025-10-29 04:12:40] 2025-10-29 08:11:27,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 04:12:40] 2025-10-29 08:11:28,169 | INFO     | time since job start (5525s) is within the limit (172800.0s)
[2025-10-29 04:12:40] 2025-10-29 08:11:29,816 | INFO     | monitor loop #364: job 0:6853142448 is in state 'finished'
[2025-10-29 04:12:40] 2025-10-29 08:11:29,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 04:12:40] 2025-10-29 08:11:30,218 | INFO     | time since job start (5527s) is within the limit (172800.0s)
[2025-10-29 04:12:40] 2025-10-29 08:11:32,356 | INFO     | monitor loop #365: job 0:6853142448 is in state 'finished'
[2025-10-29 04:12:40] 2025-10-29 08:11:32,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 04:12:40] 2025-10-29 08:11:34,373 | INFO     | PID=2656114 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-29 04:12:40] 2025-10-29 08:11:34,374 | INFO     | .. there are 33 such processes running
[2025-10-29 04:12:40] 2025-10-29 08:11:34,889 | INFO     | monitor loop #366: job 0:6853142448 is in state 'finished'
[2025-10-29 04:12:40] 2025-10-29 08:11:34,889 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 04:12:40] 2025-10-29 08:11:35,375 | INFO     | time since job start (5532s) is within the limit (172800.0s)
[2025-10-29 04:12:40] 2025-10-29 08:11:37,384 | INFO     | time since job start (5534s) is within the limit (172800.0s)
[2025-10-29 04:12:40] 2025-10-29 08:11:37,395 | INFO     | monitor loop #367: job 0:6853142448 is in state 'finished'
[2025-10-29 04:12:40] 2025-10-29 08:11:37,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 04:12:40] 2025-10-29 08:11:39,391 | INFO     | time since job start (5536s) is within the limit (172800.0s)
[2025-10-29 04:12:40] 2025-10-29 08:11:39,901 | INFO     | monitor loop #368: job 0:6853142448 is in state 'finished'
[2025-10-29 04:12:40] 2025-10-29 08:11:39,901 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 04:12:40] 2025-10-29 08:11:41,398 | INFO     | time since job start (5538s) is within the limit (172800.0s)
[2025-10-29 04:12:40] 2025-10-29 08:11:42,414 | INFO     | monitor loop #369: job 0:6853142448 is in state 'finished'
[2025-10-29 04:12:40] 2025-10-29 08:11:42,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 04:12:40] 2025-10-29 08:11:43,407 | INFO     | time since job start (5540s) is within the limit (172800.0s)
[2025-10-29 04:12:40] 2025-10-29 08:11:44,941 | INFO     | monitor loop #370: job 0:6853142448 is in state 'finished'
[2025-10-29 04:12:40] 2025-10-29 08:11:44,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 04:12:40] 2025-10-29 08:11:45,414 | INFO     | time since job start (5542s) is within the limit (172800.0s)
[2025-10-29 04:12:40] 2025-10-29 08:11:47,421 | INFO     | time since job start (5544s) is within the limit (172800.0s)
[2025-10-29 04:12:40] 2025-10-29 08:11:47,447 | INFO     | monitor loop #371: job 0:6853142448 is in state 'finished'
[2025-10-29 04:12:40] 2025-10-29 08:11:47,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-29 04:12:40] 2025-10-29 08:11:48,021 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-29 04:12:40] 2025-10-29 08:11:48,038 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3691.5488437500003
[2025-10-29 04:12:40] 2025-10-29 08:11:48,101 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6853142448/memory_monitor_summary.json (trf name=prmon)
[2025-10-29 04:12:40] 2025-10-29 08:11:48,102 | INFO     | extracted standard info from prmon json
[2025-10-29 04:12:40] 2025-10-29 08:11:48,102 | INFO     | extracted standard memory fields from prmon json
[2025-10-29 04:12:40] 2025-10-29 08:11:48,102 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-29 04:12:40] 2025-10-29 08:11:48,102 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-29 04:12:40] 2025-10-29 08:11:48,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-29 04:12:40] 2025-10-29 08:11:48,103 | INFO     | fitting pss+swap vs Time
[2025-10-29 04:12:40] 2025-10-29 08:11:48,104 | INFO     | sum of square deviations: 164765414.83950594
[2025-10-29 04:12:40] 2025-10-29 08:11:48,113 | INFO     | sum of deviations: 1970348894.716048
[2025-10-29 04:12:40] 2025-10-29 08:11:48,113 | INFO     | mean x: 1761722847.1975307
[2025-10-29 04:12:40] 2025-10-29 08:11:48,113 | INFO     | mean y: 2501311.5802469137
[2025-10-29 04:12:40] 2025-10-29 08:11:48,113 | INFO     | -- intersect: -21065079334.22995
[2025-10-29 04:12:40] 2025-10-29 08:11:48,113 | INFO     | intersect: -21065079334.22995
[2025-10-29 04:12:40] 2025-10-29 08:11:48,113 | INFO     | chi2: 0.06478088502125148
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | -- intersect: -21065079334.22995
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | current memory leak: 11.96 B/s (using 81 data points, chi2=0.06)
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | could have reported an average CPU frequency of 3702 MHz (7 samples)
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | ..............................
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | . Timing measurements:
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | . get job = 0 s
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | . initial setup = 9 s
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | . payload setup = 47 s
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | . stage-in = 0 s
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | . payload execution = 5391 s
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | . stage-out = 4 s
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | . log creation = 0 s
[2025-10-29 04:12:40] 2025-10-29 08:11:48,114 | INFO     | ..............................
[2025-10-29 04:12:40] 2025-10-29 08:11:48,442 | INFO     | 
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | job summary report
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | --------------------------------------------------
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | PanDA job id: 6853142448
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | task id: 46771637
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | errors: (none)
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | pilot state: finished 
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | transexitcode: 0
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | exeerrorcode: 0
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | exeerrordiag: 
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | exitcode: 0
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | exitmsg: OK
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | cpuconsumptiontime: 26334 s
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | nevents: 400
[2025-10-29 04:12:40] 2025-10-29 08:11:48,443 | INFO     | neventsw: 0
[2025-10-29 04:12:40] 2025-10-29 08:11:48,444 | INFO     | pid: 2669305
[2025-10-29 04:12:40] 2025-10-29 08:11:48,444 | INFO     | pgrp: 2669305
[2025-10-29 04:12:40] 2025-10-29 08:11:48,444 | INFO     | corecount: 8
[2025-10-29 04:12:40] 2025-10-29 08:11:48,444 | INFO     | event service: False
[2025-10-29 04:12:40] 2025-10-29 08:11:48,444 | INFO     | sizes: {0: 2348931, 1: 2348931, 11: 2348959, 22: 2348987, 31: 2349277, 33: 2349305, 5445: 2376194, 5449: 2385192, 5451: 2385248, 5484: 2385272}
[2025-10-29 04:12:40] 2025-10-29 08:11:48,444 | INFO     | --------------------------------------------------
[2025-10-29 04:12:40] 2025-10-29 08:11:48,444 | INFO     | 
[2025-10-29 04:12:40] 2025-10-29 08:11:48,444 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-29 04:12:40] 2025-10-29 08:11:48,605 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,605 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | job 6853142448 has completed (purged errors)
[2025-10-29 04:12:40] 2025-10-29 08:11:48,606 | INFO     | overall cleanup function is called
[2025-10-29 04:12:40] 2025-10-29 08:11:49,614 | INFO     | --- collectZombieJob: --- 10, [2669305]
[2025-10-29 04:12:40] 2025-10-29 08:11:49,614 | INFO     | zombie collector waiting for pid 2669305
[2025-10-29 04:12:40] 2025-10-29 08:11:49,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-29 04:12:40] 2025-10-29 08:11:49,614 | INFO     | collected zombie processes
[2025-10-29 04:12:40] 2025-10-29 08:11:49,614 | INFO     | will attempt to kill all subprocesses of pid=2669305
[2025-10-29 04:12:40] 2025-10-29 08:11:50,878 | INFO     | process IDs to be killed: [2669305] (in reverse order)
[2025-10-29 04:12:40] 2025-10-29 08:11:51,189 | WARNING  | found no corresponding commands to process id(s)
[2025-10-29 04:12:40] 2025-10-29 08:11:51,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-29 04:12:40] 2025-10-29 08:11:51,228 | INFO     | did not find any defunct processes belonging to 2669305
[2025-10-29 04:12:40] 2025-10-29 08:11:51,307 | INFO     | did not find any defunct processes belonging to 2669305
[2025-10-29 04:12:40] 2025-10-29 08:11:51,307 | INFO     | ready for new job
[2025-10-29 04:12:40] 2025-10-29 08:11:51,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-29 04:12:40] 2025-10-29 08:11:51,309 | INFO     | ***************************************
[2025-10-29 04:12:40] 2025-10-29 08:11:51,309 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-29 04:12:40] 2025-10-29 08:11:51,309 | INFO     | ***************************************
[2025-10-29 04:12:40] 2025-10-29 08:11:51,309 | INFO     | 
[2025-10-29 04:12:40] 2025-10-29 08:11:51,318 | INFO     | architecture information:
[2025-10-29 04:12:40] 2025-10-29 08:11:51,328 | INFO     | executing command: cat /etc/os-release
[2025-10-29 04:12:40] 2025-10-29 08:11:51,395 | INFO     | cat /etc/os-release:
[2025-10-29 04:12:40] NAME="CentOS Linux"
[2025-10-29 04:12:40] VERSION="7 (Core)"
[2025-10-29 04:12:40] ID="centos"
[2025-10-29 04:12:40] ID_LIKE="rhel fedora"
[2025-10-29 04:12:40] VERSION_ID="7"
[2025-10-29 04:12:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-29 04:12:40] ANSI_COLOR="0;31"
[2025-10-29 04:12:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-29 04:12:40] HOME_URL="https://www.centos.org/"
[2025-10-29 04:12:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-29 04:12:40] 
[2025-10-29 04:12:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-29 04:12:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-29 04:12:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-29 04:12:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-29 04:12:40] 
[2025-10-29 04:12:40] 2025-10-29 08:11:51,395 | INFO     | ***************************************
[2025-10-29 04:12:40] 2025-10-29 08:11:51,899 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-29 04:12:40] 2025-10-29 08:11:51,992 | INFO     | sufficient remaining disk space (170196467712 B)
[2025-10-29 04:12:40] 2025-10-29 08:11:51,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-29 04:12:40] 2025-10-29 08:11:51,993 | INFO     | current server update state: UPDATING_FINAL
[2025-10-29 04:12:40] 2025-10-29 08:11:51,993 | INFO     | update_server=False
[2025-10-29 04:12:40] 2025-10-29 08:11:51,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-29 04:12:40] 2025-10-29 08:11:52,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 04:12:40] 2025-10-29 08:11:52,363 | INFO     | all data control threads have been joined
[2025-10-29 04:12:40] 2025-10-29 08:11:52,464 | INFO     | all job control threads have been joined
[2025-10-29 04:12:40] 2025-10-29 08:11:52,494 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-29 04:12:40] 2025-10-29 08:11:52,494 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-29 04:12:40] 2025-10-29 08:11:52,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-29 04:12:40] 2025-10-29 08:11:52,494 | INFO     | will abort loop
[2025-10-29 04:12:40] 2025-10-29 08:11:52,999 | INFO     | [job] retrieve thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:53,064 | INFO     | all payload control threads have been joined
[2025-10-29 04:12:40] 2025-10-29 08:11:53,369 | INFO     | [data] control thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:53,401 | INFO     | [job] validate thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:53,401 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:53,405 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:53,405 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:53,470 | INFO     | [job] control thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:53,495 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 04:12:40] 2025-10-29 08:11:53,500 | INFO     | [job] job monitor thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:53,502 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-29 04:12:40] 2025-10-29 08:11:53,517 | INFO     | [data] copytool_in thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:54,086 | INFO     | [payload] control thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:54,099 | INFO     | [data] copytool_out thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:54,510 | INFO     | [job] queue monitor thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:54,543 | INFO     | [payload] failed_post thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:54,598 | INFO     | [payload] validate_post thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:11:57,504 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:12:02,127 | INFO     | job.realtimelogging is not enabled
[2025-10-29 04:12:40] 2025-10-29 08:12:03,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 04:12:40] 2025-10-29 08:12:22,408 | INFO     | PID=2656114 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-29 04:12:40] 2025-10-29 08:12:22,410 | INFO     | .. there are 33 such processes running
[2025-10-29 04:12:40] 2025-10-29 08:12:22,412 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 04:12:40] 2025-10-29 08:12:22,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 04:12:40] 2025-10-29 08:12:22,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 04:12:40] 2025-10-29 08:12:32,171 | INFO     | [monitor] cgroup control has ended
[2025-10-29 04:12:40] 2025-10-29 08:12:32,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140401368987456)>', '<ExcThread(monitor, started 140400736073472)>']
[2025-10-29 04:12:40] 2025-10-29 08:12:33,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 04:12:40] 2025-10-29 08:12:33,484 | INFO     | [monitor] control thread has ended
[2025-10-29 04:12:40] 2025-10-29 08:12:37,961 | INFO     | all workflow threads have been joined
[2025-10-29 04:12:40] 2025-10-29 08:12:37,961 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 04:12:40] 2025-10-29 08:12:37,962 | INFO     | traces error code: 0
[2025-10-29 04:12:40] 2025-10-29 08:12:37,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 04:12:40] 2025-10-29 08:12:38,665 [wrapper] ==== pilot stdout END ====
[2025-10-29 04:12:40] 2025-10-29 08:12:38,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 04:12:40] 2025-10-29 08:12:38,670 [wrapper] pilotpid: 2656114
[2025-10-29 04:12:40] 2025-10-29 08:12:38,673 [wrapper] Pilot exit status: 0
[2025-10-29 04:12:40] 2025-10-29 08:12:38,728 [wrapper] pandaids: 6853142448
[2025-10-29 04:12:40] 2025-10-29 08:12:39,073 [wrapper] cleanup supervisor_pilot 3131766 2656115
[2025-10-29 04:12:40] 2025-10-29 08:12:39,080 [wrapper] Test setup, not cleaning
[2025-10-29 04:12:40] 2025-10-29 08:12:39,089 [wrapper] apfmon messages muted
[2025-10-29 04:12:40] 2025-10-29 08:12:39,095 [wrapper] ==== wrapper stdout END ====
[2025-10-29 04:12:40] 2025-10-29 08:12:39,110 [wrapper] ==== wrapper stderr END ====
[2025-10-29 04:12:40]  *** Error codes and diagnostics ***
[2025-10-29 04:12:40]     "exeErrorCode": 0,
[2025-10-29 04:12:40]     "exeErrorDiag": "",
[2025-10-29 04:12:40]     "pilotErrorCode": 0,
[2025-10-29 04:12:40]     "pilotErrorDiag": "",
[2025-10-29 04:12:40]  *** Listing of results directory ***
[2025-10-29 04:12:40] total 428228
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 21 14:27 pilot3.tar.gz
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 21 15:08 queuedata.json
[2025-10-29 04:12:40] -rwx------. 1 boincer umatlas     36292 Oct 21 15:11 runpilot2-wrapper.sh
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas       100 Oct 29 02:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 04:12:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 29 02:38 run_atlas
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas       105 Oct 29 02:38 job.xml
[2025-10-29 04:12:40] -rw-r--r--. 2 boincer umatlas 227330919 Oct 29 02:38 EVNT.46771634._002892.pool.root.1
[2025-10-29 04:12:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 29 02:38 start_atlas.sh
[2025-10-29 04:12:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 29 02:38 shared
[2025-10-29 04:12:40] -rw-r--r--. 2 boincer umatlas    569678 Oct 29 02:38 input.tar.gz
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas         0 Oct 29 02:38 boinc_lockfile
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas      2560 Oct 29 02:38 pandaJob.out
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas    979126 Oct 29 02:39 agis_schedconf.cvmfs.json
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas   1560632 Oct 29 02:39 agis_ddmendpoints.agis.ALL.json
[2025-10-29 04:12:40] drwx------. 5 boincer umatlas      4096 Oct 29 02:39 pilot3
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas 205132004 Oct 29 04:09 HITS.46771637._072936.pool.root.1
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas       530 Oct 29 04:09 boinc_task_state.xml
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas      7174 Oct 29 04:10 init_data.xml
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas      1050 Oct 29 04:11 memory_monitor_summary.json
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas    333527 Oct 29 04:11 log.46771637._072936.job.log.tgz.1
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas      7809 Oct 29 04:11 heartbeat.json
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas        95 Oct 29 04:12 pilot_heartbeat.json
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas      5083 Oct 29 04:12 pilotlog.txt
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 29 04:12 boinc_mmap_file
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas        27 Oct 29 04:12 wrapper_checkpoint.txt
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas    736098 Oct 29 04:12 log.46771637._072936.job.log.1
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas       357 Oct 29 04:12 output.list
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas       620 Oct 29 04:12 runtime_log
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas   1085440 Oct 29 04:12 result.tar.gz
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas       657 Oct 29 04:12 zIHMDmawWV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmH9fMDmk6KTAn.diag
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas      8703 Oct 29 04:12 runtime_log.err
[2025-10-29 04:12:40] -rw-r--r--. 1 boincer umatlas     22313 Oct 29 04:12 stderr.txt
[2025-10-29 04:12:40] HITS file was successfully produced:
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas 205132004 Oct 29 04:09 shared/HITS.pool.root.1
[2025-10-29 04:12:40]  *** Contents of shared directory: ***
[2025-10-29 04:12:40] total 423972
[2025-10-29 04:12:40] -rw-r--r--. 2 boincer umatlas 227330919 Oct 29 02:38 ATLAS.root_0
[2025-10-29 04:12:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 29 02:38 start_atlas.sh
[2025-10-29 04:12:40] -rw-r--r--. 2 boincer umatlas    569678 Oct 29 02:38 input.tar.gz
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas 205132004 Oct 29 04:09 HITS.pool.root.1
[2025-10-29 04:12:40] -rw-------. 1 boincer umatlas   1085440 Oct 29 04:12 result.tar.gz
04:12:41 (2651275): run_atlas exited; CPU time 26493.411513
04:12:41 (2651275): called boinc_finish(0)

</stderr_txt>
]]>

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