Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:56:16 (3811624): wrapper (7.7.26015): starting
11:56:16 (3811624): wrapper: running run_atlas (--nthreads 10)
[2025-10-25 11:56:16] Arguments: --nthreads 10
[2025-10-25 11:56:16] Threads: 10
[2025-10-25 11:56:16] Checking for CVMFS
[2025-10-25 11:56:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 11:56:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 11:56:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 11:56:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 11:56:17] 2.13.2.0 4167112 148188 410420 152123 2 758 29928347 32935936 27141 16776704 0 625783497 99.708 473242428 16867 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-25 11:56:17] CVMFS is ok
[2025-10-25 11:56:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 11:56:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 11:56:17] Further information can be found at the LHC@home message board.
[2025-10-25 11:56:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 11:56:17] Checking for apptainer binary...
[2025-10-25 11:56:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 11:56:17] Running /usr/bin/apptainer --version
[2025-10-25 11:56:17] apptainer version 1.4.3-1.el9
[2025-10-25 11:56:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 11:56:17] c7-16-8.aglt2.org
[2025-10-25 11:56:17] apptainer works
[2025-10-25 11:56:18] Set ATHENA_PROC_NUMBER=10
[2025-10-25 11:56:18] Set ATHENA_CORE_NUMBER=10
[2025-10-25 11:56:18] Starting ATLAS job with PandaID=6858415657
[2025-10-25 11:56:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 14:35:58]  *** The last 200 lines of the pilot log: ***
[2025-10-25 14:35:58] 2025-10-25 18:35:16,745 | INFO     | fitting pss+swap vs Time
[2025-10-25 14:35:58] 2025-10-25 18:35:16,745 | INFO     | sum of square deviations: 1177156955.0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,745 | INFO     | sum of deviations: 42131570432.5
[2025-10-25 14:35:58] 2025-10-25 18:35:16,746 | INFO     | mean x: 1761412563.5
[2025-10-25 14:35:58] 2025-10-25 18:35:16,746 | INFO     | mean y: 2205496.8397435895
[2025-10-25 14:35:58] 2025-10-25 18:35:16,746 | INFO     | -- intersect: -63040430546.363716
[2025-10-25 14:35:58] 2025-10-25 18:35:16,746 | INFO     | intersect: -63040430546.363716
[2025-10-25 14:35:58] 2025-10-25 18:35:16,746 | INFO     | chi2: 2.7244208904038727
[2025-10-25 14:35:58] 2025-10-25 18:35:16,746 | INFO     | sum of square deviations: 1067554900.0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,746 | INFO     | sum of deviations: 49321022716.0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,746 | INFO     | mean x: 1761412411.0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,746 | INFO     | mean y: 2215155.582781457
[2025-10-25 14:35:58] 2025-10-25 18:35:16,747 | INFO     | -- intersect: -81375015687.69781
[2025-10-25 14:35:58] 2025-10-25 18:35:16,747 | INFO     | intersect: -81375015687.69781
[2025-10-25 14:35:58] 2025-10-25 18:35:16,747 | INFO     | chi2: 1.9502171243098794
[2025-10-25 14:35:58] 2025-10-25 18:35:16,747 | INFO     | current chi2=1.9502171243098794 (change=28.417186522865933 %)
[2025-10-25 14:35:58] 2025-10-25 18:35:16,747 | INFO     | sum of square deviations: 964976232.5
[2025-10-25 14:35:58] 2025-10-25 18:35:16,747 | INFO     | sum of deviations: 46019732941.5
[2025-10-25 14:35:58] 2025-10-25 18:35:16,747 | INFO     | mean x: 1761412258.5
[2025-10-25 14:35:58] 2025-10-25 18:35:16,747 | INFO     | mean y: 2210247.308219178
[2025-10-25 14:35:58] 2025-10-25 18:35:16,747 | INFO     | -- intersect: -83999570320.95502
[2025-10-25 14:35:58] 2025-10-25 18:35:16,747 | INFO     | intersect: -83999570320.95502
[2025-10-25 14:35:58] 2025-10-25 18:35:16,747 | INFO     | chi2: 1.9508656352920217
[2025-10-25 14:35:58] 2025-10-25 18:35:16,748 | INFO     | current chi2=1.9508656352920217 (change=-0.03325327083115662 %)
[2025-10-25 14:35:58] 2025-10-25 18:35:16,748 | INFO     | right removable region: 145
[2025-10-25 14:35:58] 2025-10-25 18:35:16,748 | INFO     | sum of square deviations: 1067554900.0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,748 | INFO     | sum of deviations: 15620451352.999998
[2025-10-25 14:35:58] 2025-10-25 18:35:16,748 | INFO     | mean x: 1761412716.0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,748 | INFO     | mean y: 2242031.7218543044
[2025-10-25 14:35:58] 2025-10-25 18:35:16,748 | INFO     | -- intersect: -25770729122.11164
[2025-10-25 14:35:58] 2025-10-25 18:35:16,748 | INFO     | intersect: -25770729122.11164
[2025-10-25 14:35:58] 2025-10-25 18:35:16,748 | INFO     | chi2: 1.0755903769215782
[2025-10-25 14:35:58] 2025-10-25 18:35:16,748 | INFO     | current chi2=1.0755903769215782 (change=60.52040341086465 %)
[2025-10-25 14:35:58] 2025-10-25 18:35:16,749 | INFO     | sum of square deviations: 964976232.5
[2025-10-25 14:35:58] 2025-10-25 18:35:16,749 | INFO     | sum of deviations: 5565933318.500002
[2025-10-25 14:35:58] 2025-10-25 18:35:16,749 | INFO     | mean x: 1761412868.5
[2025-10-25 14:35:58] 2025-10-25 18:35:16,749 | INFO     | mean y: 2256961.801369863
[2025-10-25 14:35:58] 2025-10-25 18:35:16,749 | INFO     | -- intersect: -10157481943.911846
[2025-10-25 14:35:58] 2025-10-25 18:35:16,749 | INFO     | intersect: -10157481943.911846
[2025-10-25 14:35:58] 2025-10-25 18:35:16,749 | INFO     | chi2: 0.9213951044106121
[2025-10-25 14:35:58] 2025-10-25 18:35:16,749 | INFO     | current chi2=0.9213951044106121 (change=14.335873192942165 %)
[2025-10-25 14:35:58] 2025-10-25 18:35:16,749 | INFO     | left removable region: 20
[2025-10-25 14:35:58] 2025-10-25 18:35:16,749 | INFO     | sum of square deviations: 605592750.0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,750 | INFO     | sum of deviations: 7396013563.999999
[2025-10-25 14:35:58] 2025-10-25 18:35:16,750 | INFO     | mean x: 1761412838.0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,750 | INFO     | mean y: 2272101.304
[2025-10-25 14:35:58] 2025-10-25 18:35:16,750 | INFO     | -- intersect: -21509599105.297684
[2025-10-25 14:35:58] 2025-10-25 18:35:16,750 | INFO     | intersect: -21509599105.297684
[2025-10-25 14:35:58] 2025-10-25 18:35:16,750 | INFO     | chi2: 0.050179275447239144
[2025-10-25 14:35:58] 2025-10-25 18:35:16,750 | INFO     | -- intersect: -21509599105.297684
[2025-10-25 14:35:58] 2025-10-25 18:35:16,750 | INFO     | current memory leak: 12.21 B/s (using 125 data points, chi2=0.05)
[2025-10-25 14:35:58] 2025-10-25 18:35:16,750 | INFO     | could have reported an average CPU frequency of 3009 MHz (9 samples)
[2025-10-25 14:35:58] 2025-10-25 18:35:16,751 | INFO     | ..............................
[2025-10-25 14:35:58] 2025-10-25 18:35:16,751 | INFO     | . Timing measurements:
[2025-10-25 14:35:58] 2025-10-25 18:35:16,751 | INFO     | . get job = 0 s
[2025-10-25 14:35:58] 2025-10-25 18:35:16,751 | INFO     | . initial setup = 2 s
[2025-10-25 14:35:58] 2025-10-25 18:35:16,751 | INFO     | . payload setup = 10 s
[2025-10-25 14:35:58] 2025-10-25 18:35:16,751 | INFO     | . stage-in = 0 s
[2025-10-25 14:35:58] 2025-10-25 18:35:16,751 | INFO     | . payload execution = 9482 s
[2025-10-25 14:35:58] 2025-10-25 18:35:16,751 | INFO     | . stage-out = 0 s
[2025-10-25 14:35:58] 2025-10-25 18:35:16,751 | INFO     | . log creation = 0 s
[2025-10-25 14:35:58] 2025-10-25 18:35:16,751 | INFO     | ..............................
[2025-10-25 14:35:58] 2025-10-25 18:35:16,802 | INFO     | 
[2025-10-25 14:35:58] 2025-10-25 18:35:16,802 | INFO     | job summary report
[2025-10-25 14:35:58] 2025-10-25 18:35:16,802 | INFO     | --------------------------------------------------
[2025-10-25 14:35:58] 2025-10-25 18:35:16,802 | INFO     | PanDA job id: 6858415657
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | task id: 46771637
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | errors: (none)
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | pilot state: finished 
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | transexitcode: 0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | exeerrorcode: 0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | exeerrordiag: 
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | exitcode: 0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | exitmsg: OK
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | cpuconsumptiontime: 39395 s
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | nevents: 400
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | neventsw: 0
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | pid: 3833687
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | pgrp: 3833687
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | corecount: 10
[2025-10-25 14:35:58] 2025-10-25 18:35:16,803 | INFO     | event service: False
[2025-10-25 14:35:58] 2025-10-25 18:35:16,804 | INFO     | sizes: {0: 2348708, 1: 2348907, 9: 2349169, 11: 2349197, 9496: 2377739, 9497: 2386737, 9498: 2386921, 9502: 2387179}
[2025-10-25 14:35:58] 2025-10-25 18:35:16,804 | INFO     | --------------------------------------------------
[2025-10-25 14:35:58] 2025-10-25 18:35:16,804 | INFO     | 
[2025-10-25 14:35:58] 2025-10-25 18:35:16,804 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-25 14:35:58] 2025-10-25 18:35:16,824 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,824 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,824 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 14:35:58] 2025-10-25 18:35:16,825 | INFO     | job 6858415657 has completed (purged errors)
[2025-10-25 14:35:58] 2025-10-25 18:35:16,826 | INFO     | overall cleanup function is called
[2025-10-25 14:35:58] 2025-10-25 18:35:17,833 | INFO     | --- collectZombieJob: --- 10, [3833687]
[2025-10-25 14:35:58] 2025-10-25 18:35:17,833 | INFO     | zombie collector waiting for pid 3833687
[2025-10-25 14:35:58] 2025-10-25 18:35:17,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 14:35:58] 2025-10-25 18:35:17,833 | INFO     | collected zombie processes
[2025-10-25 14:35:58] 2025-10-25 18:35:17,834 | INFO     | will attempt to kill all subprocesses of pid=3833687
[2025-10-25 14:35:58] 2025-10-25 18:35:18,235 | INFO     | process IDs to be killed: [3833687] (in reverse order)
[2025-10-25 14:35:58] 2025-10-25 18:35:18,349 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 14:35:58] 2025-10-25 18:35:18,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 14:35:58] 2025-10-25 18:35:18,365 | INFO     | did not find any defunct processes belonging to 3833687
[2025-10-25 14:35:58] 2025-10-25 18:35:18,379 | INFO     | did not find any defunct processes belonging to 3833687
[2025-10-25 14:35:58] 2025-10-25 18:35:18,380 | INFO     | ready for new job
[2025-10-25 14:35:58] 2025-10-25 18:35:18,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 14:35:58] 2025-10-25 18:35:18,381 | INFO     | ***************************************
[2025-10-25 14:35:58] 2025-10-25 18:35:18,381 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 14:35:58] 2025-10-25 18:35:18,381 | INFO     | ***************************************
[2025-10-25 14:35:58] 2025-10-25 18:35:18,381 | INFO     | 
[2025-10-25 14:35:58] 2025-10-25 18:35:18,396 | INFO     | architecture information:
[2025-10-25 14:35:58] 2025-10-25 18:35:18,397 | INFO     | executing command: cat /etc/os-release
[2025-10-25 14:35:58] 2025-10-25 18:35:18,414 | INFO     | cat /etc/os-release:
[2025-10-25 14:35:58] NAME="CentOS Linux"
[2025-10-25 14:35:58] VERSION="7 (Core)"
[2025-10-25 14:35:58] ID="centos"
[2025-10-25 14:35:58] ID_LIKE="rhel fedora"
[2025-10-25 14:35:58] VERSION_ID="7"
[2025-10-25 14:35:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 14:35:58] ANSI_COLOR="0;31"
[2025-10-25 14:35:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 14:35:58] HOME_URL="https://www.centos.org/"
[2025-10-25 14:35:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 14:35:58] 
[2025-10-25 14:35:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 14:35:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 14:35:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 14:35:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 14:35:58] 
[2025-10-25 14:35:58] 2025-10-25 18:35:18,415 | INFO     | ***************************************
[2025-10-25 14:35:58] 2025-10-25 18:35:18,917 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-25 14:35:58] 2025-10-25 18:35:18,940 | INFO     | sufficient remaining disk space (76568068096 B)
[2025-10-25 14:35:58] 2025-10-25 18:35:18,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 14:35:58] 2025-10-25 18:35:18,940 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 14:35:58] 2025-10-25 18:35:18,940 | INFO     | update_server=False
[2025-10-25 14:35:58] 2025-10-25 18:35:18,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 14:35:58] 2025-10-25 18:35:19,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 14:35:58] 2025-10-25 18:35:19,287 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-25 14:35:58] 2025-10-25 18:35:19,287 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-25 14:35:58] 2025-10-25 18:35:19,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 14:35:58] 2025-10-25 18:35:19,288 | INFO     | will abort loop
[2025-10-25 14:35:58] 2025-10-25 18:35:19,456 | INFO     | all job control threads have been joined
[2025-10-25 14:35:58] 2025-10-25 18:35:19,712 | INFO     | all payload control threads have been joined
[2025-10-25 14:35:58] 2025-10-25 18:35:19,904 | INFO     | all data control threads have been joined
[2025-10-25 14:35:58] 2025-10-25 18:35:19,946 | INFO     | [job] retrieve thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:19,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 14:35:58] 2025-10-25 18:35:20,002 | INFO     | [payload] validate_post thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:20,291 | INFO     | [payload] failed_post thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:20,293 | INFO     | [job] job monitor thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:20,461 | INFO     | [job] control thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:20,598 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:20,717 | INFO     | [payload] control thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:20,910 | INFO     | [data] control thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:20,928 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:21,224 | INFO     | [job] validate thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:21,269 | INFO     | [data] copytool_in thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:21,362 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:21,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 14:35:58] 2025-10-25 18:35:21,955 | INFO     | [data] copytool_out thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:22,817 | INFO     | [job] queue monitor thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:23,025 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:29,071 | INFO     | job.realtimelogging is not enabled
[2025-10-25 14:35:58] 2025-10-25 18:35:30,077 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 14:35:58] 2025-10-25 18:35:48,995 | INFO     | PID=3817490 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-25 14:35:58] 2025-10-25 18:35:48,995 | INFO     | .. there are 27 such processes running
[2025-10-25 14:35:58] 2025-10-25 18:35:48,996 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 14:35:58] 2025-10-25 18:35:48,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 14:35:58] 2025-10-25 18:35:48,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 14:35:58] 2025-10-25 18:35:51,367 | INFO     | [monitor] cgroup control has ended
[2025-10-25 14:35:58] 2025-10-25 18:35:53,152 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357870733120)>', '<ExcThread(monitor, started 140357232744192)>']
[2025-10-25 14:35:58] 2025-10-25 18:35:54,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 14:35:58] 2025-10-25 18:35:54,016 | INFO     | [monitor] control thread has ended
[2025-10-25 14:35:58] 2025-10-25 18:35:58,173 | INFO     | all workflow threads have been joined
[2025-10-25 14:35:58] 2025-10-25 18:35:58,174 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 14:35:58] 2025-10-25 18:35:58,174 | INFO     | traces error code: 0
[2025-10-25 14:35:58] 2025-10-25 18:35:58,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 14:35:58] 2025-10-25 18:35:58,299 [wrapper] ==== pilot stdout END ====
[2025-10-25 14:35:58] 2025-10-25 18:35:58,305 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 14:35:58] 2025-10-25 18:35:58,308 [wrapper] pilotpid: 3817490
[2025-10-25 14:35:58] 2025-10-25 18:35:58,311 [wrapper] Pilot exit status: 0
[2025-10-25 14:35:58] 2025-10-25 18:35:58,321 [wrapper] pandaids: 6858415657
[2025-10-25 14:35:58] 2025-10-25 18:35:58,402 [wrapper] cleanup supervisor_pilot  321859 3817491
[2025-10-25 14:35:58] 2025-10-25 18:35:58,405 [wrapper] Test setup, not cleaning
[2025-10-25 14:35:58] 2025-10-25 18:35:58,407 [wrapper] apfmon messages muted
[2025-10-25 14:35:58] 2025-10-25 18:35:58,409 [wrapper] ==== wrapper stdout END ====
[2025-10-25 14:35:58] 2025-10-25 18:35:58,411 [wrapper] ==== wrapper stderr END ====
[2025-10-25 14:35:58]  *** Error codes and diagnostics ***
[2025-10-25 14:35:58]     "exeErrorCode": 0,
[2025-10-25 14:35:58]     "exeErrorDiag": "",
[2025-10-25 14:35:58]     "pilotErrorCode": 0,
[2025-10-25 14:35:58]     "pilotErrorDiag": "",
[2025-10-25 14:35:58]  *** Listing of results directory ***
[2025-10-25 14:35:58] total 437208
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 25 03:27 pilot3.tar.gz
[2025-10-25 14:35:58] -rwx------. 1 boincer umatlas     36292 Oct 25 03:31 runpilot2-wrapper.sh
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 25 03:31 queuedata.json
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas       100 Oct 25 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 14:35:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 25 11:56 run_atlas
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas       105 Oct 25 11:56 job.xml
[2025-10-25 14:35:58] -rw-r--r--. 2 boincer umatlas 225849691 Oct 25 11:56 EVNT.46771634._003526.pool.root.1
[2025-10-25 14:35:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 25 11:56 start_atlas.sh
[2025-10-25 14:35:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 25 11:56 shared
[2025-10-25 14:35:58] -rw-r--r--. 2 boincer umatlas    569671 Oct 25 11:56 input.tar.gz
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas         0 Oct 25 11:56 boinc_lockfile
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas      2559 Oct 25 11:56 pandaJob.out
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas    978288 Oct 25 11:56 agis_schedconf.cvmfs.json
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas   1560772 Oct 25 11:56 agis_ddmendpoints.agis.ALL.json
[2025-10-25 14:35:58] drwx------. 5 boincer umatlas      4096 Oct 25 11:56 pilot3
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas      6934 Oct 25 14:27 init_data.xml
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas 214460750 Oct 25 14:34 HITS.46771637._132489.pool.root.1
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas       529 Oct 25 14:34 boinc_task_state.xml
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas      1043 Oct 25 14:35 memory_monitor_summary.json
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas        95 Oct 25 14:35 pilot_heartbeat.json
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas    414667 Oct 25 14:35 log.46771637._132489.job.log.tgz.1
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas      7787 Oct 25 14:35 heartbeat.json
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 25 14:35 boinc_mmap_file
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas        27 Oct 25 14:35 wrapper_checkpoint.txt
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas      5082 Oct 25 14:35 pilotlog.txt
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas   1326904 Oct 25 14:35 log.46771637._132489.job.log.1
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas       357 Oct 25 14:35 output.list
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas       620 Oct 25 14:35 runtime_log
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas   1761280 Oct 25 14:35 result.tar.gz
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas      8700 Oct 25 14:35 runtime_log.err
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas       654 Oct 25 14:35 bKVKDm2unW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyCnMDmQFnaSm.diag
[2025-10-25 14:35:58] -rw-r--r--. 1 boincer umatlas     20933 Oct 25 14:35 stderr.txt
[2025-10-25 14:35:58] HITS file was successfully produced:
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas 214460750 Oct 25 14:34 shared/HITS.pool.root.1
[2025-10-25 14:35:58]  *** Contents of shared directory: ***
[2025-10-25 14:35:58] total 432300
[2025-10-25 14:35:58] -rw-r--r--. 2 boincer umatlas 225849691 Oct 25 11:56 ATLAS.root_0
[2025-10-25 14:35:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 25 11:56 start_atlas.sh
[2025-10-25 14:35:58] -rw-r--r--. 2 boincer umatlas    569671 Oct 25 11:56 input.tar.gz
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas 214460750 Oct 25 14:34 HITS.pool.root.1
[2025-10-25 14:35:58] -rw-------. 1 boincer umatlas   1761280 Oct 25 14:35 result.tar.gz
14:36:00 (3811624): run_atlas exited; CPU time 39737.997989
14:36:00 (3811624): called boinc_finish(0)

</stderr_txt>
]]>

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