Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
11:30:29 (3588042): wrapper (7.7.26015): starting
11:30:29 (3588042): wrapper: running run_atlas (--nthreads 8)
[2025-10-26 11:30:29] Arguments: --nthreads 8
[2025-10-26 11:30:29] Threads: 8
[2025-10-26 11:30:29] Checking for CVMFS
[2025-10-26 11:30:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-26 11:30:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-26 11:30:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-26 11:30:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-26 11:30:29] 2.13.2.0 5454 2233 52720 152162 1 188 2642041 4096001 2748 130560 0 8359682 99.998 77316 713 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-26 11:30:29] CVMFS is ok
[2025-10-26 11:30:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-26 11:30:29] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-26 11:30:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-26 11:30:29] Further information can be found at the LHC@home message board.
[2025-10-26 11:30:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-26 11:30:29] Checking for apptainer binary...
[2025-10-26 11:30:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-26 11:30:29] Running /usr/bin/apptainer --version
[2025-10-26 11:30:29] apptainer version 1.4.2
[2025-10-26 11:30:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-26 11:30:29] 3950x-linux
[2025-10-26 11:30:29] apptainer works
[2025-10-26 11:30:29] Set ATHENA_PROC_NUMBER=8
[2025-10-26 11:30:29] Set ATHENA_CORE_NUMBER=8
[2025-10-26 11:30:29] Starting ATLAS job with PandaID=6859093531
[2025-10-26 11:30:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc210/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-26 12:42:14]  *** The last 200 lines of the pilot log: ***
[2025-10-26 12:42:14]  status=None
[2025-10-26 12:42:14]  status_code=0
[2025-10-26 12:42:14]  storage_token=
[2025-10-26 12:42:14]  surl=/var/lib/multiboinc/boinc210/slots/0/PanDA_Pilot-6859093531/log.46771637._132862.job.log.tgz.1
[2025-10-26 12:42:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/aa/log.46771637._132862.job.log.tgz.1
[2025-10-26 12:42:14]  workdir=None
[2025-10-26 12:42:14] ]
[2025-10-26 12:42:14] 2025-10-26 19:41:36,430 | INFO     | transferring file log.46771637._132862.job.log.tgz.1 from /var/lib/multiboinc/boinc210/slots/0/PanDA_Pilot-6859093531/log.46771637._132862.job.log.tgz.1 to /var/li
[2025-10-26 12:42:14] 2025-10-26 19:41:36,430 | INFO     | executing command: /usr/bin/env mv /var/lib/multiboinc/boinc210/slots/0/PanDA_Pilot-6859093531/log.46771637._132862.job.log.tgz.1 /var/lib/multiboinc/boinc210/slot
[2025-10-26 12:42:14] 2025-10-26 19:41:36,443 | INFO     | adding to output.list: log.46771637._132862.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/aa/log.46771637._132862.job.log.tg
[2025-10-26 12:42:14] 2025-10-26 19:41:36,444 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-26 12:42:14] 2025-10-26 19:41:36,444 | INFO     | summary of transferred files:
[2025-10-26 12:42:14] 2025-10-26 19:41:36,444 | INFO     |  -- lfn=log.46771637._132862.job.log.tgz.1, status_code=0, status=transferred
[2025-10-26 12:42:14] 2025-10-26 19:41:36,444 | INFO     | stage-out finished correctly
[2025-10-26 12:42:14] 2025-10-26 19:41:37,623 | INFO     | time since job start (4257s) is within the limit (172800.0s)
[2025-10-26 12:42:14] 2025-10-26 19:41:37,768 | INFO     | monitor loop #320: job 0:6859093531 is in state 'finished'
[2025-10-26 12:42:14] 2025-10-26 19:41:37,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 12:42:14] 2025-10-26 19:41:37,945 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-26 12:42:14] 2025-10-26 19:41:39,628 | INFO     | time since job start (4259s) is within the limit (172800.0s)
[2025-10-26 12:42:14] 2025-10-26 19:41:40,271 | INFO     | monitor loop #321: job 0:6859093531 is in state 'finished'
[2025-10-26 12:42:14] 2025-10-26 19:41:40,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 12:42:14] 2025-10-26 19:41:40,498 | INFO     | job 6859093531 has state=finished
[2025-10-26 12:42:14] 2025-10-26 19:41:40,498 | INFO     | preparing for final server update for job 6859093531 in state='finished'
[2025-10-26 12:42:14] 2025-10-26 19:41:40,498 | INFO     | this job has now completed (state=finished)
[2025-10-26 12:42:14] 2025-10-26 19:41:40,498 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-26 12:42:14] 2025-10-26 19:41:40,498 | INFO     | log transfer has been attempted: DONE
[2025-10-26 12:42:14] 2025-10-26 19:41:40,498 | INFO     | job 6859093531 has finished - writing final server update
[2025-10-26 12:42:14] 2025-10-26 19:41:40,498 | INFO     | total number of processed events: 400 (read)
[2025-10-26 12:42:14] 2025-10-26 19:41:40,499 | INFO     | executing command: lscpu
[2025-10-26 12:42:14] 2025-10-26 19:41:40,522 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-26 12:42:14] 2025-10-26 19:41:41,633 | INFO     | time since job start (4261s) is within the limit (172800.0s)
[2025-10-26 12:42:14] 2025-10-26 19:41:42,773 | INFO     | monitor loop #322: job 0:6859093531 is in state 'finished'
[2025-10-26 12:42:14] 2025-10-26 19:41:42,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 12:42:14] 2025-10-26 19:41:42,937 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-26 12:42:14] 2025-10-26 19:41:42,941 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2763.3621875
[2025-10-26 12:42:14] 2025-10-26 19:41:42,944 | INFO     | using path: /var/lib/multiboinc/boinc210/slots/0/PanDA_Pilot-6859093531/memory_monitor_summary.json (trf name=prmon)
[2025-10-26 12:42:14] 2025-10-26 19:41:42,945 | INFO     | extracted standard info from prmon json
[2025-10-26 12:42:14] 2025-10-26 19:41:42,945 | INFO     | extracted standard memory fields from prmon json
[2025-10-26 12:42:14] 2025-10-26 19:41:42,945 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-26 12:42:14] 2025-10-26 19:41:42,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-26 12:42:14] 2025-10-26 19:41:42,945 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-26 12:42:14] 2025-10-26 19:41:42,946 | INFO     | fitting pss+swap vs Time
[2025-10-26 12:42:14] 2025-10-26 19:41:42,946 | INFO     | sum of square deviations: 77515872.0
[2025-10-26 12:42:14] 2025-10-26 19:41:42,946 | INFO     | sum of deviations: -3485993717.9999995
[2025-10-26 12:42:14] 2025-10-26 19:41:42,946 | INFO     | mean x: 1761505661.0
[2025-10-26 12:42:14] 2025-10-26 19:41:42,946 | INFO     | mean y: 2566511.603174603
[2025-10-26 12:42:14] 2025-10-26 19:41:42,946 | INFO     | -- intersect: 79219861112.47455
[2025-10-26 12:42:14] 2025-10-26 19:41:42,946 | INFO     | intersect: 79219861112.47455
[2025-10-26 12:42:14] 2025-10-26 19:41:42,946 | INFO     | chi2: 0.0274139433763373
[2025-10-26 12:42:14] 2025-10-26 19:41:42,946 | INFO     | -- intersect: 79219861112.47455
[2025-10-26 12:42:14] 2025-10-26 19:41:42,946 | INFO     | current memory leak: -44.97 B/s (using 63 data points, chi2=0.03)
[2025-10-26 12:42:14] 2025-10-26 19:41:42,947 | INFO     | could have reported an average CPU frequency of 3104 MHz (6 samples)
[2025-10-26 12:42:14] 2025-10-26 19:41:42,947 | INFO     | ..............................
[2025-10-26 12:42:14] 2025-10-26 19:41:42,947 | INFO     | . Timing measurements:
[2025-10-26 12:42:14] 2025-10-26 19:41:42,947 | INFO     | . get job = 0 s
[2025-10-26 12:42:14] 2025-10-26 19:41:42,947 | INFO     | . initial setup = 3 s
[2025-10-26 12:42:14] 2025-10-26 19:41:42,947 | INFO     | . payload setup = 5 s
[2025-10-26 12:42:14] 2025-10-26 19:41:42,947 | INFO     | . stage-in = 0 s
[2025-10-26 12:42:14] 2025-10-26 19:41:42,947 | INFO     | . payload execution = 4231 s
[2025-10-26 12:42:14] 2025-10-26 19:41:42,947 | INFO     | . stage-out = 0 s
[2025-10-26 12:42:14] 2025-10-26 19:41:42,947 | INFO     | . log creation = 0 s
[2025-10-26 12:42:14] 2025-10-26 19:41:42,947 | INFO     | ..............................
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | 
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | job summary report
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | --------------------------------------------------
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | PanDA job id: 6859093531
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | task id: 46771637
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | errors: (none)
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | pilot state: finished 
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | transexitcode: 0
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | exeerrorcode: 0
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | exeerrordiag: 
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | exitcode: 0
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | exitmsg: OK
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | cpuconsumptiontime: 30884 s
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | nevents: 400
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | neventsw: 0
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | pid: 3598539
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | pgrp: 3598539
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | corecount: 8
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | event service: False
[2025-10-26 12:42:14] 2025-10-26 19:41:43,203 | INFO     | sizes: {0: 2348894, 4: 2349156, 11: 2349184, 4239: 2375252, 4240: 2384278, 4242: 2384334, 4247: 2384656}
[2025-10-26 12:42:14] 2025-10-26 19:41:43,204 | INFO     | --------------------------------------------------
[2025-10-26 12:42:14] 2025-10-26 19:41:43,204 | INFO     | 
[2025-10-26 12:42:14] 2025-10-26 19:41:43,204 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc210/slots/0
[2025-10-26 12:42:14] 2025-10-26 19:41:43,218 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | job 6859093531 has completed (purged errors)
[2025-10-26 12:42:14] 2025-10-26 19:41:43,219 | INFO     | overall cleanup function is called
[2025-10-26 12:42:14] 2025-10-26 19:41:44,227 | INFO     | --- collectZombieJob: --- 10, [3598539]
[2025-10-26 12:42:14] 2025-10-26 19:41:44,227 | INFO     | zombie collector waiting for pid 3598539
[2025-10-26 12:42:14] 2025-10-26 19:41:44,227 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-26 12:42:14] 2025-10-26 19:41:44,227 | INFO     | collected zombie processes
[2025-10-26 12:42:14] 2025-10-26 19:41:44,227 | INFO     | will attempt to kill all subprocesses of pid=3598539
[2025-10-26 12:42:14] 2025-10-26 19:41:44,341 | INFO     | process IDs to be killed: [3598539] (in reverse order)
[2025-10-26 12:42:14] 2025-10-26 19:41:44,387 | WARNING  | found no corresponding commands to process id(s)
[2025-10-26 12:42:14] 2025-10-26 19:41:44,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-26 12:42:14] 2025-10-26 19:41:44,390 | INFO     | did not find any defunct processes belonging to 3598539
[2025-10-26 12:42:14] 2025-10-26 19:41:44,393 | INFO     | did not find any defunct processes belonging to 3598539
[2025-10-26 12:42:14] 2025-10-26 19:41:44,393 | INFO     | ready for new job
[2025-10-26 12:42:14] 2025-10-26 19:41:44,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-26 12:42:14] 2025-10-26 19:41:44,394 | INFO     | ***************************************
[2025-10-26 12:42:14] 2025-10-26 19:41:44,394 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-26 12:42:14] 2025-10-26 19:41:44,394 | INFO     | ***************************************
[2025-10-26 12:42:14] 2025-10-26 19:41:44,395 | INFO     | 
[2025-10-26 12:42:14] 2025-10-26 19:41:44,396 | INFO     | architecture information:
[2025-10-26 12:42:14] 2025-10-26 19:41:44,396 | INFO     | executing command: cat /etc/os-release
[2025-10-26 12:42:14] 2025-10-26 19:41:44,406 | INFO     | cat /etc/os-release:
[2025-10-26 12:42:14] NAME="CentOS Linux"
[2025-10-26 12:42:14] VERSION="7 (Core)"
[2025-10-26 12:42:14] ID="centos"
[2025-10-26 12:42:14] ID_LIKE="rhel fedora"
[2025-10-26 12:42:14] VERSION_ID="7"
[2025-10-26 12:42:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-26 12:42:14] ANSI_COLOR="0;31"
[2025-10-26 12:42:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-26 12:42:14] HOME_URL="https://www.centos.org/"
[2025-10-26 12:42:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-26 12:42:14] 
[2025-10-26 12:42:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-26 12:42:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-26 12:42:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-26 12:42:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-26 12:42:14] 
[2025-10-26 12:42:14] 2025-10-26 19:41:44,407 | INFO     | ***************************************
[2025-10-26 12:42:14] 2025-10-26 19:41:44,909 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc210/slots/0
[2025-10-26 12:42:14] 2025-10-26 19:41:44,920 | INFO     | sufficient remaining disk space (194090369024 B)
[2025-10-26 12:42:14] 2025-10-26 19:41:44,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-26 12:42:14] 2025-10-26 19:41:44,920 | INFO     | current server update state: UPDATING_FINAL
[2025-10-26 12:42:14] 2025-10-26 19:41:44,920 | INFO     | update_server=False
[2025-10-26 12:42:14] 2025-10-26 19:41:44,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-26 12:42:14] 2025-10-26 19:41:44,921 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-26 12:42:14] 2025-10-26 19:41:44,921 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-26 12:42:14] 2025-10-26 19:41:44,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-26 12:42:14] 2025-10-26 19:41:45,007 | INFO     | all data control threads have been joined
[2025-10-26 12:42:14] 2025-10-26 19:41:45,270 | INFO     | all job control threads have been joined
[2025-10-26 12:42:14] 2025-10-26 19:41:45,276 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-26 12:42:14] 2025-10-26 19:41:45,276 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-26 12:42:14] 2025-10-26 19:41:45,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-26 12:42:14] 2025-10-26 19:41:45,276 | INFO     | will abort loop
[2025-10-26 12:42:14] 2025-10-26 19:41:45,609 | INFO     | all payload control threads have been joined
[2025-10-26 12:42:14] 2025-10-26 19:41:45,923 | INFO     | [job] retrieve thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:45,926 | INFO     | [job] queue monitor thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:46,013 | INFO     | [data] control thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:46,045 | INFO     | [payload] validate_post thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:46,147 | INFO     | [payload] validate_pre thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:46,275 | INFO     | [job] control thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:46,281 | INFO     | [job] job monitor thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:46,614 | INFO     | [payload] control thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:46,763 | INFO     | [monitor] cgroup control has ended
[2025-10-26 12:42:14] 2025-10-26 19:41:46,829 | INFO     | [payload] failed_post thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:46,897 | INFO     | [payload] execute_payloads thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:46,908 | INFO     | [data] copytool_in thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:46,926 | INFO     | [data] copytool_out thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:47,311 | INFO     | [job] validate thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:47,413 | INFO     | [job] create_data_payload thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:48,926 | INFO     | [data] queue_monitor thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:55,298 | INFO     | job.realtimelogging is not enabled
[2025-10-26 12:42:14] 2025-10-26 19:41:56,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-26 12:42:14] 2025-10-26 19:41:58,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128097920898880)>', '<ExcThread(monitor, started 128097550571264)>']
[2025-10-26 12:42:14] 2025-10-26 19:42:03,333 | INFO     | all workflow threads have been joined
[2025-10-26 12:42:14] 2025-10-26 19:42:03,345 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-26 12:42:14] 2025-10-26 19:42:03,345 | INFO     | traces error code: 0
[2025-10-26 12:42:14] 2025-10-26 19:42:03,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-26 12:42:14] 2025-10-26 19:42:14,817 | INFO     | PID=3591895 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-26 12:42:14] 2025-10-26 19:42:14,818 | INFO     | .. there are 2 such processes running
[2025-10-26 12:42:14] 2025-10-26 19:42:14,818 | INFO     | found 0 job(s) in 20 queues
[2025-10-26 12:42:14] 2025-10-26 19:42:14,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-26 12:42:14] 2025-10-26 19:42:14,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-26 12:42:14] 2025-10-26 19:42:14,818 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-26 12:42:14] 2025-10-26 19:42:14,818 | INFO     | [monitor] control thread has ended
[2025-10-26 12:42:14] 2025-10-26 19:42:14,875 [wrapper] ==== pilot stdout END ====
[2025-10-26 12:42:14] 2025-10-26 19:42:14,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-26 12:42:14] 2025-10-26 19:42:14,879 [wrapper] pilotpid: 3591895
[2025-10-26 12:42:14] 2025-10-26 19:42:14,881 [wrapper] Pilot exit status: 0
[2025-10-26 12:42:14] 2025-10-26 19:42:14,888 [wrapper] pandaids: 6859093531
[2025-10-26 12:42:14] 2025-10-26 19:42:14,915 [wrapper] cleanup supervisor_pilot 3645770 3591896
[2025-10-26 12:42:14] 2025-10-26 19:42:14,917 [wrapper] Test setup, not cleaning
[2025-10-26 12:42:14] 2025-10-26 19:42:14,919 [wrapper] apfmon messages muted
[2025-10-26 12:42:14] 2025-10-26 19:42:14,921 [wrapper] ==== wrapper stdout END ====
[2025-10-26 12:42:14] 2025-10-26 19:42:14,923 [wrapper] ==== wrapper stderr END ====
[2025-10-26 12:42:14]  *** Error codes and diagnostics ***
[2025-10-26 12:42:14]     "exeErrorCode": 0,
[2025-10-26 12:42:14]     "exeErrorDiag": "",
[2025-10-26 12:42:14]     "pilotErrorCode": 0,
[2025-10-26 12:42:14]     "pilotErrorDiag": "",
[2025-10-26 12:42:14]  *** Listing of results directory ***
[2025-10-26 12:42:14] total 431436
[2025-10-26 12:42:14] -rw-r--r-- 1 root root    557409 Oct 25 03:54 pilot3.tar.gz
[2025-10-26 12:42:14] -rw-r--r-- 1 root root      5112 Oct 25 03:57 queuedata.json
[2025-10-26 12:42:14] -rwx------ 1 4871 1028     36292 Oct 25 03:59 runpilot2-wrapper.sh
[2025-10-26 12:42:14] -rw-r--r-- 1 root root       100 Oct 26 11:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-26 12:42:14] -rwxr-xr-x 1 root root      7986 Oct 26 11:30 run_atlas
[2025-10-26 12:42:14] -rw-r--r-- 1 root root       105 Oct 26 11:30 job.xml
[2025-10-26 12:42:14] -rw-r--r-- 2 root root 228960473 Oct 26 11:30 EVNT.46771634._003569.pool.root.1
[2025-10-26 12:42:14] drwxrwx--x 2 root root      4096 Oct 26 11:30 shared
[2025-10-26 12:42:14] -rw-r--r-- 2 root root    569680 Oct 26 11:30 input.tar.gz
[2025-10-26 12:42:14] -rw-r--r-- 2 root root     15120 Oct 26 11:30 start_atlas.sh
[2025-10-26 12:42:14] -rw-r--r-- 1 root root         0 Oct 26 11:30 boinc_setup_complete
[2025-10-26 12:42:14] -rw-r--r-- 1 root root         0 Oct 26 11:30 boinc_lockfile
[2025-10-26 12:42:14] -rw-r--r-- 1 root root      2559 Oct 26 11:30 pandaJob.out
[2025-10-26 12:42:14] -rw------- 1 root root    978581 Oct 26 11:30 agis_schedconf.cvmfs.json
[2025-10-26 12:42:14] -rw------- 1 root root   1560772 Oct 26 11:30 agis_ddmendpoints.agis.ALL.json
[2025-10-26 12:42:14] drwxr-xr-x 5  320  320      4096 Oct 26 11:30 pilot3
[2025-10-26 12:42:14] -rw-r--r-- 1 root root      7449 Oct 26 12:36 init_data.xml
[2025-10-26 12:42:14] -rw------- 1 root root 206996436 Oct 26 12:41 HITS.46771637._132862.pool.root.1
[2025-10-26 12:42:14] -rw-r--r-- 1 root root       529 Oct 26 12:41 boinc_task_state.xml
[2025-10-26 12:42:14] -rw------- 1 root root        95 Oct 26 12:41 pilot_heartbeat.json
[2025-10-26 12:42:14] -rw------- 1 root root      1017 Oct 26 12:41 memory_monitor_summary.json
[2025-10-26 12:42:14] -rw------- 1 root root    315803 Oct 26 12:41 log.46771637._132862.job.log.tgz.1
[2025-10-26 12:42:14] -rw------- 1 root root      7742 Oct 26 12:41 heartbeat.json
[2025-10-26 12:42:14] -rw-r--r-- 1 root root        27 Oct 26 12:41 wrapper_checkpoint.txt
[2025-10-26 12:42:14] -rw-r--r-- 1 root root      8192 Oct 26 12:41 boinc_mmap_file
[2025-10-26 12:42:14] -rw------- 1 root root       822 Oct 26 12:42 pilotlog.txt
[2025-10-26 12:42:14] -rw------- 1 root root    648005 Oct 26 12:42 log.46771637._132862.job.log.1
[2025-10-26 12:42:14] -rw------- 1 root root       357 Oct 26 12:42 output.list
[2025-10-26 12:42:14] -rw-r--r-- 1 root root       620 Oct 26 12:42 runtime_log
[2025-10-26 12:42:14] -rw------- 1 root root    983040 Oct 26 12:42 result.tar.gz
[2025-10-26 12:42:14] -rw-r--r-- 1 root root      8876 Oct 26 12:42 runtime_log.err
[2025-10-26 12:42:14] -rw------- 1 root root       648 Oct 26 12:42 aoSKDmZArW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7QEODmZi5uJm.diag
[2025-10-26 12:42:14] -rw-r--r-- 1 root root     22087 Oct 26 12:42 stderr.txt
[2025-10-26 12:42:14] HITS file was successfully produced:
[2025-10-26 12:42:14] -rw------- 1 root root 206996436 Oct 26 12:41 shared/HITS.pool.root.1
[2025-10-26 12:42:14]  *** Contents of shared directory: ***
[2025-10-26 12:42:14] total 427288
[2025-10-26 12:42:14] -rw-r--r-- 2 root root 228960473 Oct 26 11:30 ATLAS.root_0
[2025-10-26 12:42:14] -rw-r--r-- 2 root root    569680 Oct 26 11:30 input.tar.gz
[2025-10-26 12:42:14] -rw-r--r-- 2 root root     15120 Oct 26 11:30 start_atlas.sh
[2025-10-26 12:42:14] -rw------- 1 root root 206996436 Oct 26 12:41 HITS.pool.root.1
[2025-10-26 12:42:14] -rw------- 1 root root    983040 Oct 26 12:42 result.tar.gz
12:42:16 (3588042): run_atlas exited; CPU time 30935.688586
12:42:16 (3588042): called boinc_finish(0)

</stderr_txt>
]]>

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