Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
09:27:40 (3414987): wrapper (7.7.26015): starting
09:27:40 (3414987): wrapper: running run_atlas (--nthreads 8)
[2025-10-26 09:27:40] Arguments: --nthreads 8
[2025-10-26 09:27:40] Threads: 8
[2025-10-26 09:27:40] Checking for CVMFS
[2025-10-26 09:27:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-26 09:27:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-26 09:27:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-26 09:27:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-26 09:27:41] 2.13.2.0 5454 2111 53144 152160 3 61 2628283 4096000 5496 130560 0 7992932 99.998 74700 736 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-26 09:27:41] CVMFS is ok
[2025-10-26 09:27:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-26 09:27:41] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-26 09:27:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-26 09:27:41] Further information can be found at the LHC@home message board.
[2025-10-26 09:27:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-26 09:27:41] Checking for apptainer binary...
[2025-10-26 09:27:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-26 09:27:41] Running /usr/bin/apptainer --version
[2025-10-26 09:27:41] apptainer version 1.4.2
[2025-10-26 09:27:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-26 09:27:41] 3950x-linux
[2025-10-26 09:27:41] apptainer works
[2025-10-26 09:27:41] Set ATHENA_PROC_NUMBER=8
[2025-10-26 09:27:41] Set ATHENA_CORE_NUMBER=8
[2025-10-26 09:27:41] Starting ATLAS job with PandaID=6859197881
[2025-10-26 09:27:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc210/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-26 11:30:23]  *** The last 200 lines of the pilot log: ***
[2025-10-26 11:30:23] 2025-10-26 18:29:51,055 | INFO     | monitor loop #534: job 0:6859197881 is in state 'finished'
[2025-10-26 11:30:23] 2025-10-26 18:29:51,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 11:30:23] 2025-10-26 18:29:52,161 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-26 11:30:23] 2025-10-26 18:29:52,166 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3274.65359375
[2025-10-26 11:30:23] 2025-10-26 18:29:52,171 | INFO     | using path: /var/lib/multiboinc/boinc210/slots/4/PanDA_Pilot-6859197881/memory_monitor_summary.json (trf name=prmon)
[2025-10-26 11:30:23] 2025-10-26 18:29:52,172 | INFO     | extracted standard info from prmon json
[2025-10-26 11:30:23] 2025-10-26 18:29:52,172 | INFO     | extracted standard memory fields from prmon json
[2025-10-26 11:30:23] 2025-10-26 18:29:52,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-26 11:30:23] 2025-10-26 18:29:52,173 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-26 11:30:23] 2025-10-26 18:29:52,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-26 11:30:23] 2025-10-26 18:29:52,175 | INFO     | fitting pss+swap vs Time
[2025-10-26 11:30:23] 2025-10-26 18:29:52,175 | INFO     | sum of square deviations: 522502820.0
[2025-10-26 11:30:23] 2025-10-26 18:29:52,176 | INFO     | sum of deviations: -2466432764.000001
[2025-10-26 11:30:23] 2025-10-26 18:29:52,176 | INFO     | mean x: 1761499725.0
[2025-10-26 11:30:23] 2025-10-26 18:29:52,176 | INFO     | mean y: 2543893.1428571427
[2025-10-26 11:30:23] 2025-10-26 18:29:52,176 | INFO     | -- intersect: 8317562433.171008
[2025-10-26 11:30:23] 2025-10-26 18:29:52,176 | INFO     | intersect: 8317562433.171008
[2025-10-26 11:30:23] 2025-10-26 18:29:52,176 | INFO     | chi2: 1.8968590150970686
[2025-10-26 11:30:23] 2025-10-26 18:29:52,176 | INFO     | sum of square deviations: 459366752.5
[2025-10-26 11:30:23] 2025-10-26 18:29:52,177 | INFO     | sum of deviations: -1859858249.4999943
[2025-10-26 11:30:23] 2025-10-26 18:29:52,177 | INFO     | mean x: 1761499572.5
[2025-10-26 11:30:23] 2025-10-26 18:29:52,177 | INFO     | mean y: 2545361.3245614036
[2025-10-26 11:30:23] 2025-10-26 18:29:52,177 | INFO     | -- intersect: 7134405674.625834
[2025-10-26 11:30:23] 2025-10-26 18:29:52,177 | INFO     | intersect: 7134405674.625834
[2025-10-26 11:30:23] 2025-10-26 18:29:52,177 | INFO     | chi2: 1.8986527909006414
[2025-10-26 11:30:23] 2025-10-26 18:29:52,178 | INFO     | current chi2=1.8986527909006414 (change=-0.09456558390983417 %)
[2025-10-26 11:30:23] 2025-10-26 18:29:52,178 | INFO     | right removable region: 113
[2025-10-26 11:30:23] 2025-10-26 18:29:52,178 | INFO     | sum of square deviations: 459366752.5
[2025-10-26 11:30:23] 2025-10-26 18:29:52,178 | INFO     | sum of deviations: -24168393034.5
[2025-10-26 11:30:23] 2025-10-26 18:29:52,178 | INFO     | mean x: 1761499877.5
[2025-10-26 11:30:23] 2025-10-26 18:29:52,178 | INFO     | mean y: 2595544.043859649
[2025-10-26 11:30:23] 2025-10-26 18:29:52,179 | INFO     | -- intersect: 92679353576.59999
[2025-10-26 11:30:23] 2025-10-26 18:29:52,179 | INFO     | intersect: 92679353576.59999
[2025-10-26 11:30:23] 2025-10-26 18:29:52,179 | INFO     | chi2: 0.10955210987889447
[2025-10-26 11:30:23] 2025-10-26 18:29:52,179 | INFO     | current chi2=0.10955210987889447 (change=94.22455179815837 %)
[2025-10-26 11:30:23] 2025-10-26 18:29:52,179 | INFO     | sum of square deviations: 401533110.0
[2025-10-26 11:30:23] 2025-10-26 18:29:52,180 | INFO     | sum of deviations: -22510298567.999992
[2025-10-26 11:30:23] 2025-10-26 18:29:52,180 | INFO     | mean x: 1761500030.0
[2025-10-26 11:30:23] 2025-10-26 18:29:52,180 | INFO     | mean y: 2591044.0642201835
[2025-10-26 11:30:23] 2025-10-26 18:29:52,180 | INFO     | -- intersect: 98753828775.96867
[2025-10-26 11:30:23] 2025-10-26 18:29:52,180 | INFO     | intersect: 98753828775.96867
[2025-10-26 11:30:23] 2025-10-26 18:29:52,180 | INFO     | chi2: 0.09533868848013335
[2025-10-26 11:30:23] 2025-10-26 18:29:52,180 | INFO     | current chi2=0.09533868848013335 (change=12.974119270248183 %)
[2025-10-26 11:30:23] 2025-10-26 18:29:52,180 | INFO     | left removable region: 20
[2025-10-26 11:30:23] 2025-10-26 18:29:52,180 | INFO     | sum of square deviations: 249388862.0
[2025-10-26 11:30:23] 2025-10-26 18:29:52,181 | INFO     | sum of deviations: -13668465260.999994
[2025-10-26 11:30:23] 2025-10-26 18:29:52,181 | INFO     | mean x: 1761500152.0
[2025-10-26 11:30:23] 2025-10-26 18:29:52,181 | INFO     | mean y: 2571027.3440860217
[2025-10-26 11:30:23] 2025-10-26 18:29:52,181 | INFO     | -- intersect: 96546592447.42743
[2025-10-26 11:30:23] 2025-10-26 18:29:52,181 | INFO     | intersect: 96546592447.42743
[2025-10-26 11:30:23] 2025-10-26 18:29:52,181 | INFO     | chi2: 0.07801527233976899
[2025-10-26 11:30:23] 2025-10-26 18:29:52,181 | INFO     | -- intersect: 96546592447.42743
[2025-10-26 11:30:23] 2025-10-26 18:29:52,181 | INFO     | current memory leak: -54.81 B/s (using 93 data points, chi2=0.08)
[2025-10-26 11:30:23] 2025-10-26 18:29:52,182 | INFO     | could have reported an average CPU frequency of 3268 MHz (8 samples)
[2025-10-26 11:30:23] 2025-10-26 18:29:52,182 | INFO     | ..............................
[2025-10-26 11:30:23] 2025-10-26 18:29:52,182 | INFO     | . Timing measurements:
[2025-10-26 11:30:23] 2025-10-26 18:29:52,182 | INFO     | . get job = 0 s
[2025-10-26 11:30:23] 2025-10-26 18:29:52,182 | INFO     | . initial setup = 4 s
[2025-10-26 11:30:23] 2025-10-26 18:29:52,182 | INFO     | . payload setup = 12 s
[2025-10-26 11:30:23] 2025-10-26 18:29:52,182 | INFO     | . stage-in = 0 s
[2025-10-26 11:30:23] 2025-10-26 18:29:52,182 | INFO     | . payload execution = 7264 s
[2025-10-26 11:30:23] 2025-10-26 18:29:52,182 | INFO     | . stage-out = 0 s
[2025-10-26 11:30:23] 2025-10-26 18:29:52,182 | INFO     | . log creation = 0 s
[2025-10-26 11:30:23] 2025-10-26 18:29:52,182 | INFO     | ..............................
[2025-10-26 11:30:23] 2025-10-26 18:29:52,266 | INFO     | 
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | job summary report
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | --------------------------------------------------
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | PanDA job id: 6859197881
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | task id: 46771637
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | errors: (none)
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | pilot state: finished 
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | transexitcode: 0
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | exeerrorcode: 0
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | exeerrordiag: 
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | exitcode: 0
[2025-10-26 11:30:23] 2025-10-26 18:29:52,267 | INFO     | exitmsg: OK
[2025-10-26 11:30:23] 2025-10-26 18:29:52,268 | INFO     | cpuconsumptiontime: 38984 s
[2025-10-26 11:30:23] 2025-10-26 18:29:52,268 | INFO     | nevents: 400
[2025-10-26 11:30:23] 2025-10-26 18:29:52,268 | INFO     | neventsw: 0
[2025-10-26 11:30:23] 2025-10-26 18:29:52,268 | INFO     | pid: 3425497
[2025-10-26 11:30:23] 2025-10-26 18:29:52,268 | INFO     | pgrp: 3425497
[2025-10-26 11:30:23] 2025-10-26 18:29:52,268 | INFO     | corecount: 8
[2025-10-26 11:30:23] 2025-10-26 18:29:52,268 | INFO     | event service: False
[2025-10-26 11:30:23] 2025-10-26 18:29:52,268 | INFO     | sizes: {0: 2348727, 1: 2348926, 10: 2349188, 12: 2349216, 7281: 2376694, 7282: 2385904, 7288: 2386042}
[2025-10-26 11:30:23] 2025-10-26 18:29:52,268 | INFO     | --------------------------------------------------
[2025-10-26 11:30:23] 2025-10-26 18:29:52,268 | INFO     | 
[2025-10-26 11:30:23] 2025-10-26 18:29:52,268 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc210/slots/4
[2025-10-26 11:30:23] 2025-10-26 18:29:52,290 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,290 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,290 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,290 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-26 11:30:23] 2025-10-26 18:29:52,291 | INFO     | job 6859197881 has completed (purged errors)
[2025-10-26 11:30:23] 2025-10-26 18:29:52,292 | INFO     | overall cleanup function is called
[2025-10-26 11:30:23] 2025-10-26 18:29:53,300 | INFO     | --- collectZombieJob: --- 10, [3425497]
[2025-10-26 11:30:23] 2025-10-26 18:29:53,300 | INFO     | zombie collector waiting for pid 3425497
[2025-10-26 11:30:23] 2025-10-26 18:29:53,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-26 11:30:23] 2025-10-26 18:29:53,300 | INFO     | collected zombie processes
[2025-10-26 11:30:23] 2025-10-26 18:29:53,300 | INFO     | will attempt to kill all subprocesses of pid=3425497
[2025-10-26 11:30:23] 2025-10-26 18:29:53,491 | INFO     | process IDs to be killed: [3425497] (in reverse order)
[2025-10-26 11:30:23] 2025-10-26 18:29:53,563 | WARNING  | found no corresponding commands to process id(s)
[2025-10-26 11:30:23] 2025-10-26 18:29:53,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-26 11:30:23] 2025-10-26 18:29:53,569 | INFO     | did not find any defunct processes belonging to 3425497
[2025-10-26 11:30:23] 2025-10-26 18:29:53,573 | INFO     | did not find any defunct processes belonging to 3425497
[2025-10-26 11:30:23] 2025-10-26 18:29:53,574 | INFO     | ready for new job
[2025-10-26 11:30:23] 2025-10-26 18:29:53,574 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-26 11:30:23] 2025-10-26 18:29:53,575 | INFO     | ***************************************
[2025-10-26 11:30:23] 2025-10-26 18:29:53,575 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-26 11:30:23] 2025-10-26 18:29:53,575 | INFO     | ***************************************
[2025-10-26 11:30:23] 2025-10-26 18:29:53,575 | INFO     | 
[2025-10-26 11:30:23] 2025-10-26 18:29:53,577 | INFO     | architecture information:
[2025-10-26 11:30:23] 2025-10-26 18:29:53,577 | INFO     | executing command: cat /etc/os-release
[2025-10-26 11:30:23] 2025-10-26 18:29:53,593 | INFO     | cat /etc/os-release:
[2025-10-26 11:30:23] NAME="CentOS Linux"
[2025-10-26 11:30:23] VERSION="7 (Core)"
[2025-10-26 11:30:23] ID="centos"
[2025-10-26 11:30:23] ID_LIKE="rhel fedora"
[2025-10-26 11:30:23] VERSION_ID="7"
[2025-10-26 11:30:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-26 11:30:23] ANSI_COLOR="0;31"
[2025-10-26 11:30:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-26 11:30:23] HOME_URL="https://www.centos.org/"
[2025-10-26 11:30:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-26 11:30:23] 
[2025-10-26 11:30:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-26 11:30:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-26 11:30:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-26 11:30:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-26 11:30:23] 
[2025-10-26 11:30:23] 2025-10-26 18:29:53,593 | INFO     | ***************************************
[2025-10-26 11:30:23] 2025-10-26 18:29:54,096 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc210/slots/4
[2025-10-26 11:30:23] 2025-10-26 18:29:54,113 | INFO     | sufficient remaining disk space (192550010880 B)
[2025-10-26 11:30:23] 2025-10-26 18:29:54,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-26 11:30:23] 2025-10-26 18:29:54,113 | INFO     | current server update state: UPDATING_FINAL
[2025-10-26 11:30:23] 2025-10-26 18:29:54,113 | INFO     | update_server=False
[2025-10-26 11:30:23] 2025-10-26 18:29:54,113 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-26 11:30:23] 2025-10-26 18:29:54,113 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-26 11:30:23] 2025-10-26 18:29:54,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-26 11:30:23] 2025-10-26 18:29:54,207 | INFO     | all payload control threads have been joined
[2025-10-26 11:30:23] 2025-10-26 18:29:54,209 | INFO     | all job control threads have been joined
[2025-10-26 11:30:23] 2025-10-26 18:29:54,487 | INFO     | all data control threads have been joined
[2025-10-26 11:30:23] 2025-10-26 18:29:54,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-26 11:30:23] 2025-10-26 18:29:54,562 | INFO     | aborting loop
[2025-10-26 11:30:23] 2025-10-26 18:29:55,119 | INFO     | [job] retrieve thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:55,119 | INFO     | [job] queue monitor thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:55,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:55,213 | INFO     | [payload] control thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:55,214 | INFO     | [job] control thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:55,260 | INFO     | [payload] validate_pre thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:55,398 | INFO     | [payload] failed_post thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:55,491 | INFO     | [data] control thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:55,519 | INFO     | [job] validate thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:55,567 | INFO     | [job] job monitor thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:55,763 | INFO     | [payload] validate_post thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:55,894 | INFO     | [job] create_data_payload thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:56,119 | INFO     | [data] copytool_out thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:56,196 | INFO     | [payload] execute_payloads thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:56,311 | INFO     | [data] copytool_in thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:29:56,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-26 11:30:23] 2025-10-26 18:30:00,449 | INFO     | [data] queue_monitor thread has finished
[2025-10-26 11:30:23] 2025-10-26 18:30:14,794 | INFO     | [monitor] cgroup control has ended
[2025-10-26 11:30:23] 2025-10-26 18:30:15,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137117124089664)>', '<ExcThread(monitor, started 137116486985472)>']
[2025-10-26 11:30:23] 2025-10-26 18:30:20,187 | INFO     | all workflow threads have been joined
[2025-10-26 11:30:23] 2025-10-26 18:30:20,187 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-26 11:30:23] 2025-10-26 18:30:20,187 | INFO     | traces error code: 0
[2025-10-26 11:30:23] 2025-10-26 18:30:20,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-26 11:30:23] 2025-10-26 18:30:23,620 | INFO     | PID=3418818 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-26 11:30:23] 2025-10-26 18:30:23,620 | INFO     | .. there are 4 such processes running
[2025-10-26 11:30:23] 2025-10-26 18:30:23,621 | INFO     | found 0 job(s) in 20 queues
[2025-10-26 11:30:23] 2025-10-26 18:30:23,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-26 11:30:23] 2025-10-26 18:30:23,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-26 11:30:23] 2025-10-26 18:30:23,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-26 11:30:23] 2025-10-26 18:30:23,621 | CRITICAL | thread 'MainThread' is not alive
[2025-10-26 11:30:23] 2025-10-26 18:30:23,621 | INFO     | [monitor] control thread has ended
[2025-10-26 11:30:23] 2025-10-26 18:30:23,713 [wrapper] ==== pilot stdout END ====
[2025-10-26 11:30:23] 2025-10-26 18:30:23,716 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-26 11:30:23] 2025-10-26 18:30:23,719 [wrapper] pilotpid: 3418818
[2025-10-26 11:30:23] 2025-10-26 18:30:23,721 [wrapper] Pilot exit status: 0
[2025-10-26 11:30:23] 2025-10-26 18:30:23,732 [wrapper] pandaids: 6859197881
[2025-10-26 11:30:23] 2025-10-26 18:30:23,774 [wrapper] cleanup supervisor_pilot 3581291 3418819
[2025-10-26 11:30:23] 2025-10-26 18:30:23,777 [wrapper] Test setup, not cleaning
[2025-10-26 11:30:23] 2025-10-26 18:30:23,780 [wrapper] apfmon messages muted
[2025-10-26 11:30:23] 2025-10-26 18:30:23,783 [wrapper] ==== wrapper stdout END ====
[2025-10-26 11:30:23] 2025-10-26 18:30:23,786 [wrapper] ==== wrapper stderr END ====
[2025-10-26 11:30:23]  *** Error codes and diagnostics ***
[2025-10-26 11:30:23]     "exeErrorCode": 0,
[2025-10-26 11:30:23]     "exeErrorDiag": "",
[2025-10-26 11:30:23]     "pilotErrorCode": 0,
[2025-10-26 11:30:23]     "pilotErrorDiag": "",
[2025-10-26 11:30:23]  *** Listing of results directory ***
[2025-10-26 11:30:23] total 439332
[2025-10-26 11:30:23] -rw-r--r-- 1 root root    557409 Oct 25 04:35 pilot3.tar.gz
[2025-10-26 11:30:23] -rwx------ 1 4871 1028     36292 Oct 25 05:14 runpilot2-wrapper.sh
[2025-10-26 11:30:23] -rw-r--r-- 1 root root      5112 Oct 25 05:14 queuedata.json
[2025-10-26 11:30:23] -rw-r--r-- 1 root root       100 Oct 26 09:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-26 11:30:23] -rwxr-xr-x 1 root root      7986 Oct 26 09:27 run_atlas
[2025-10-26 11:30:23] -rw-r--r-- 1 root root       105 Oct 26 09:27 job.xml
[2025-10-26 11:30:23] -rw-r--r-- 2 root root 229005566 Oct 26 09:27 EVNT.46771634._004875.pool.root.1
[2025-10-26 11:30:23] drwxrwx--x 2 root root      4096 Oct 26 09:27 shared
[2025-10-26 11:30:23] -rw-r--r-- 2 root root    569687 Oct 26 09:27 input.tar.gz
[2025-10-26 11:30:23] -rw-r--r-- 2 root root     15120 Oct 26 09:27 start_atlas.sh
[2025-10-26 11:30:23] -rw-r--r-- 1 root root         0 Oct 26 09:27 boinc_setup_complete
[2025-10-26 11:30:23] -rw-r--r-- 1 root root         0 Oct 26 09:27 boinc_lockfile
[2025-10-26 11:30:23] -rw-r--r-- 1 root root      2561 Oct 26 09:27 pandaJob.out
[2025-10-26 11:30:23] -rw------- 1 root root    978581 Oct 26 09:27 agis_schedconf.cvmfs.json
[2025-10-26 11:30:23] -rw------- 1 root root   1560772 Oct 26 09:28 agis_ddmendpoints.agis.ALL.json
[2025-10-26 11:30:23] drwxr-xr-x 5  320  320      4096 Oct 26 09:28 pilot3
[2025-10-26 11:30:23] -rw-r--r-- 1 root root      7448 Oct 26 11:19 init_data.xml
[2025-10-26 11:30:23] -rw------- 1 root root 214075277 Oct 26 11:29 HITS.46771637._132922.pool.root.1
[2025-10-26 11:30:23] -rw------- 1 root root        95 Oct 26 11:29 pilot_heartbeat.json
[2025-10-26 11:30:23] -rw-r--r-- 1 root root       530 Oct 26 11:29 boinc_task_state.xml
[2025-10-26 11:30:23] -rw------- 1 root root      1020 Oct 26 11:29 memory_monitor_summary.json
[2025-10-26 11:30:23] -rw------- 1 root root    384053 Oct 26 11:29 log.46771637._132922.job.log.tgz.1
[2025-10-26 11:30:23] -rw------- 1 root root      7753 Oct 26 11:29 heartbeat.json
[2025-10-26 11:30:23] -rw-r--r-- 1 root root      8192 Oct 26 11:30 boinc_mmap_file
[2025-10-26 11:30:23] -rw-r--r-- 1 root root        27 Oct 26 11:30 wrapper_checkpoint.txt
[2025-10-26 11:30:23] -rw------- 1 root root       892 Oct 26 11:30 pilotlog.txt
[2025-10-26 11:30:23] -rw------- 1 root root   1062954 Oct 26 11:30 log.46771637._132922.job.log.1
[2025-10-26 11:30:23] -rw------- 1 root root       357 Oct 26 11:30 output.list
[2025-10-26 11:30:23] -rw-r--r-- 1 root root       620 Oct 26 11:30 runtime_log
[2025-10-26 11:30:23] -rw------- 1 root root   1464320 Oct 26 11:30 result.tar.gz
[2025-10-26 11:30:23] -rw-r--r-- 1 root root      8876 Oct 26 11:30 runtime_log.err
[2025-10-26 11:30:23] -rw------- 1 root root       649 Oct 26 11:30 LL4LDmELsW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmeFnMDmN3tG9m.diag
[2025-10-26 11:30:23] -rw-r--r-- 1 root root     21195 Oct 26 11:30 stderr.txt
[2025-10-26 11:30:23] HITS file was successfully produced:
[2025-10-26 11:30:23] -rw------- 1 root root 214075277 Oct 26 11:29 shared/HITS.pool.root.1
[2025-10-26 11:30:23]  *** Contents of shared directory: ***
[2025-10-26 11:30:23] total 434716
[2025-10-26 11:30:23] -rw-r--r-- 2 root root 229005566 Oct 26 09:27 ATLAS.root_0
[2025-10-26 11:30:23] -rw-r--r-- 2 root root    569687 Oct 26 09:27 input.tar.gz
[2025-10-26 11:30:23] -rw-r--r-- 2 root root     15120 Oct 26 09:27 start_atlas.sh
[2025-10-26 11:30:23] -rw------- 1 root root 214075277 Oct 26 11:29 HITS.pool.root.1
[2025-10-26 11:30:23] -rw------- 1 root root   1464320 Oct 26 11:30 result.tar.gz
11:30:25 (3414987): run_atlas exited; CPU time 39090.684934
11:30:25 (3414987): called boinc_finish(0)

</stderr_txt>
]]>

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