Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
09:44:03 (1314871): wrapper (7.7.26015): starting
09:44:03 (1314871): wrapper: running run_atlas (--nthreads 12)
[2025-10-25 09:44:03] Arguments: --nthreads 12
[2025-10-25 09:44:03] Threads: 12
[2025-10-25 09:44:03] Checking for CVMFS
[2025-10-25 09:44:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 09:44:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 09:44:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 09:44:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 09:44:03] 2.13.2.0 2997035 1279 52596 152121 2 188 9828247 16777216 916 130560 0 4267021 99.998 42760 1278 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-25 09:44:03] CVMFS is ok
[2025-10-25 09:44:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 09:44:03] Checking for apptainer binary...
[2025-10-25 09:44:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 09:44:03] Running /usr/bin/apptainer --version
[2025-10-25 09:44:03] apptainer version 1.3.0-bp160.1.36
[2025-10-25 09:44:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 09:44:03] boinc-runner
[2025-10-25 09:44:03] apptainer works
[2025-10-25 09:44:03] Set ATHENA_PROC_NUMBER=12
[2025-10-25 09:44:03] Set ATHENA_CORE_NUMBER=12
[2025-10-25 09:44:03] Starting ATLAS job with PandaID=6858644933
[2025-10-25 09:44:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 10:16:20]  *** The last 200 lines of the pilot log: ***
[2025-10-25 10:16:20]  lfn=log.46771637._132599.job.log.tgz.1
[2025-10-25 10:16:20]  mtime=0
[2025-10-25 10:16:20]  protocol_id=None
[2025-10-25 10:16:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-25 10:16:20]  replicas=None
[2025-10-25 10:16:20]  scope=mc23_13p6TeV
[2025-10-25 10:16:20]  status=None
[2025-10-25 10:16:20]  status_code=0
[2025-10-25 10:16:20]  storage_token=
[2025-10-25 10:16:20]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6858644933/log.46771637._132599.job.log.tgz.1
[2025-10-25 10:16:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/0c/log.46771637._132599.job.log.tgz.1
[2025-10-25 10:16:20]  workdir=None
[2025-10-25 10:16:20] ]
[2025-10-25 10:16:20] 2025-10-25 15:15:16,271 | INFO     | transferring file log.46771637._132599.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6858644933/log.46771637._132599.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-25 10:16:20] 2025-10-25 15:15:16,272 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6858644933/log.46771637._132599.job.log.tgz.1 /var/lib/boinc/slots/3/log.46771637._132599.job
[2025-10-25 10:16:20] 2025-10-25 15:15:16,281 | INFO     | adding to output.list: log.46771637._132599.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/0c/log.46771637._132599.job.log.tg
[2025-10-25 10:16:20] 2025-10-25 15:15:16,281 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-25 10:16:20] 2025-10-25 15:15:16,281 | INFO     | summary of transferred files:
[2025-10-25 10:16:20] 2025-10-25 15:15:16,281 | INFO     |  -- lfn=log.46771637._132599.job.log.tgz.1, status_code=0, status=transferred
[2025-10-25 10:16:20] 2025-10-25 15:15:16,281 | INFO     | stage-out finished correctly
[2025-10-25 10:16:20] 2025-10-25 15:15:16,900 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-25 10:16:20] 2025-10-25 15:15:17,280 | INFO     | time since job start (1867s) is within the limit (172800.0s)
[2025-10-25 10:16:20] 2025-10-25 15:15:17,314 | INFO     | monitor loop #145: job 0:6858644933 is in state 'finished'
[2025-10-25 10:16:20] 2025-10-25 15:15:17,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 10:16:20] 2025-10-25 15:15:19,284 | INFO     | time since job start (1869s) is within the limit (172800.0s)
[2025-10-25 10:16:20] 2025-10-25 15:15:19,515 | INFO     | job 6858644933 has state=finished
[2025-10-25 10:16:20] 2025-10-25 15:15:19,516 | INFO     | preparing for final server update for job 6858644933 in state='finished'
[2025-10-25 10:16:20] 2025-10-25 15:15:19,516 | INFO     | this job has now completed (state=finished)
[2025-10-25 10:16:20] 2025-10-25 15:15:19,516 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-25 10:16:20] 2025-10-25 15:15:19,516 | INFO     | log transfer has been attempted: DONE
[2025-10-25 10:16:20] 2025-10-25 15:15:19,516 | INFO     | job 6858644933 has finished - writing final server update
[2025-10-25 10:16:20] 2025-10-25 15:15:19,516 | INFO     | total number of processed events: 400 (read)
[2025-10-25 10:16:20] 2025-10-25 15:15:19,517 | INFO     | executing command: lscpu
[2025-10-25 10:16:20] 2025-10-25 15:15:19,531 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-25 10:16:20] 2025-10-25 15:15:19,816 | INFO     | monitor loop #146: job 0:6858644933 is in state 'finished'
[2025-10-25 10:16:20] 2025-10-25 15:15:19,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 10:16:20] 2025-10-25 15:15:21,291 | INFO     | time since job start (1871s) is within the limit (172800.0s)
[2025-10-25 10:16:20] 2025-10-25 15:15:21,688 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-25 10:16:20] 2025-10-25 15:15:21,690 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4083.65421875
[2025-10-25 10:16:20] 2025-10-25 15:15:21,692 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6858644933/memory_monitor_summary.json (trf name=prmon)
[2025-10-25 10:16:20] 2025-10-25 15:15:21,692 | INFO     | extracted standard info from prmon json
[2025-10-25 10:16:20] 2025-10-25 15:15:21,692 | INFO     | extracted standard memory fields from prmon json
[2025-10-25 10:16:20] 2025-10-25 15:15:21,692 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-25 10:16:20] 2025-10-25 15:15:21,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-25 10:16:20] 2025-10-25 15:15:21,692 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | fitting pss+swap vs Time
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | sum of square deviations: 4279150.0
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | sum of deviations: 789692854.4999999
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | mean x: 1761404474.5
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | mean y: 3036437.9583333335
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | -- intersect: -325054165902.9218
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | intersect: -325054165902.9218
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | chi2: 0.004655503201533379
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | -- intersect: -325054165902.9218
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | current memory leak: 184.54 B/s (using 24 data points, chi2=0.00)
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | could have reported an average CPU frequency of 4071 MHz (5 samples)
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | ..............................
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | . Timing measurements:
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | . get job = 0 s
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | . initial setup = 3 s
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | . payload setup = 2 s
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | . stage-in = 0 s
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | . payload execution = 1845 s
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | . stage-out = 0 s
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | . log creation = 0 s
[2025-10-25 10:16:20] 2025-10-25 15:15:21,693 | INFO     | ..............................
[2025-10-25 10:16:20] 2025-10-25 15:15:21,726 | INFO     | 
[2025-10-25 10:16:20] 2025-10-25 15:15:21,726 | INFO     | job summary report
[2025-10-25 10:16:20] 2025-10-25 15:15:21,726 | INFO     | --------------------------------------------------
[2025-10-25 10:16:20] 2025-10-25 15:15:21,726 | INFO     | PanDA job id: 6858644933
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | task id: 46771637
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | errors: (none)
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | pilot state: finished 
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | transexitcode: 0
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | exeerrorcode: 0
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | exeerrordiag: 
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | exitcode: 0
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | exitmsg: OK
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | cpuconsumptiontime: 19832 s
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | nevents: 400
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | neventsw: 0
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | pid: 1325633
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | pgrp: 1325633
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | corecount: 12
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | event service: False
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | sizes: {0: 2348885, 2: 2349147, 11: 2349175, 1852: 2374128, 1853: 2383126, 1854: 2383182, 1859: 2383536}
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | --------------------------------------------------
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | 
[2025-10-25 10:16:20] 2025-10-25 15:15:21,727 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-25 10:16:20] 2025-10-25 15:15:21,736 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | job 6858644933 has completed (purged errors)
[2025-10-25 10:16:20] 2025-10-25 15:15:21,737 | INFO     | overall cleanup function is called
[2025-10-25 10:16:20] 2025-10-25 15:15:22,743 | INFO     | --- collectZombieJob: --- 10, [1325633]
[2025-10-25 10:16:20] 2025-10-25 15:15:22,743 | INFO     | zombie collector waiting for pid 1325633
[2025-10-25 10:16:20] 2025-10-25 15:15:22,743 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 10:16:20] 2025-10-25 15:15:22,743 | INFO     | collected zombie processes
[2025-10-25 10:16:20] 2025-10-25 15:15:22,743 | INFO     | will attempt to kill all subprocesses of pid=1325633
[2025-10-25 10:16:20] 2025-10-25 15:15:22,795 | INFO     | process IDs to be killed: [1325633] (in reverse order)
[2025-10-25 10:16:20] 2025-10-25 15:15:22,825 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 10:16:20] 2025-10-25 15:15:22,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 10:16:20] 2025-10-25 15:15:22,828 | INFO     | did not find any defunct processes belonging to 1325633
[2025-10-25 10:16:20] 2025-10-25 15:15:22,830 | INFO     | did not find any defunct processes belonging to 1325633
[2025-10-25 10:16:20] 2025-10-25 15:15:22,830 | INFO     | ready for new job
[2025-10-25 10:16:20] 2025-10-25 15:15:22,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 10:16:20] 2025-10-25 15:15:22,831 | INFO     | ***************************************
[2025-10-25 10:16:20] 2025-10-25 15:15:22,831 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 10:16:20] 2025-10-25 15:15:22,831 | INFO     | ***************************************
[2025-10-25 10:16:20] 2025-10-25 15:15:22,831 | INFO     | 
[2025-10-25 10:16:20] 2025-10-25 15:15:22,832 | INFO     | architecture information:
[2025-10-25 10:16:20] 2025-10-25 15:15:22,832 | INFO     | executing command: cat /etc/os-release
[2025-10-25 10:16:20] 2025-10-25 15:15:22,839 | INFO     | cat /etc/os-release:
[2025-10-25 10:16:20] NAME="CentOS Linux"
[2025-10-25 10:16:20] VERSION="7 (Core)"
[2025-10-25 10:16:20] ID="centos"
[2025-10-25 10:16:20] ID_LIKE="rhel fedora"
[2025-10-25 10:16:20] VERSION_ID="7"
[2025-10-25 10:16:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 10:16:20] ANSI_COLOR="0;31"
[2025-10-25 10:16:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 10:16:20] HOME_URL="https://www.centos.org/"
[2025-10-25 10:16:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 10:16:20] 
[2025-10-25 10:16:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 10:16:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 10:16:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 10:16:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 10:16:20] 
[2025-10-25 10:16:20] 2025-10-25 15:15:22,839 | INFO     | ***************************************
[2025-10-25 10:16:20] 2025-10-25 15:15:23,341 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-25 10:16:20] 2025-10-25 15:15:23,350 | INFO     | sufficient remaining disk space (3863581032448 B)
[2025-10-25 10:16:20] 2025-10-25 15:15:23,350 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 10:16:20] 2025-10-25 15:15:23,350 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 10:16:20] 2025-10-25 15:15:23,350 | INFO     | update_server=False
[2025-10-25 10:16:20] 2025-10-25 15:15:23,350 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 10:16:20] 2025-10-25 15:15:23,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 10:16:20] 2025-10-25 15:15:23,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 10:16:20] 2025-10-25 15:15:23,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 10:16:20] 2025-10-25 15:15:23,351 | INFO     | aborting loop
[2025-10-25 10:16:20] 2025-10-25 15:15:23,913 | INFO     | all job control threads have been joined
[2025-10-25 10:16:20] 2025-10-25 15:15:24,078 | INFO     | all data control threads have been joined
[2025-10-25 10:16:20] 2025-10-25 15:15:24,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 10:16:20] 2025-10-25 15:15:24,355 | INFO     | [job] queue monitor thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:24,356 | INFO     | [job] job monitor thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:24,356 | INFO     | [job] retrieve thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:24,381 | INFO     | all payload control threads have been joined
[2025-10-25 10:16:20] 2025-10-25 15:15:24,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:24,917 | INFO     | [job] control thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:25,038 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:25,083 | INFO     | [data] control thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:25,160 | INFO     | [job] validate thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:25,214 | INFO     | [payload] failed_post thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:25,279 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:25,332 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:25,387 | INFO     | [payload] control thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:25,718 | INFO     | [data] copytool_in thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:25,730 | INFO     | [payload] validate_post thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:26,329 | INFO     | [data] copytool_out thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:27,356 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 10:16:20] 2025-10-25 15:15:54,417 | INFO     | PID=1318771 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-25 10:16:20] 2025-10-25 15:15:54,417 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 10:16:20] 2025-10-25 15:15:54,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 10:16:20] 2025-10-25 15:15:54,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 10:16:20] 2025-10-25 15:16:13,307 | INFO     | [monitor] cgroup control has ended
[2025-10-25 10:16:20] 2025-10-25 15:16:15,252 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140208527779648)>', '<ExcThread(monitor, started 140207588370176)>']
[2025-10-25 10:16:20] 2025-10-25 15:16:15,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 10:16:20] 2025-10-25 15:16:15,521 | INFO     | [monitor] control thread has ended
[2025-10-25 10:16:20] 2025-10-25 15:16:20,278 | INFO     | all workflow threads have been joined
[2025-10-25 10:16:20] 2025-10-25 15:16:20,278 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 10:16:20] 2025-10-25 15:16:20,278 | INFO     | traces error code: 0
[2025-10-25 10:16:20] 2025-10-25 15:16:20,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 10:16:20] 2025-10-25 15:16:20,369 [wrapper] ==== pilot stdout END ====
[2025-10-25 10:16:20] 2025-10-25 15:16:20,371 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 10:16:20] 2025-10-25 15:16:20,372 [wrapper] pilotpid: 1318771
[2025-10-25 10:16:20] 2025-10-25 15:16:20,373 [wrapper] Pilot exit status: 0
[2025-10-25 10:16:20] 2025-10-25 15:16:20,377 [wrapper] pandaids: 6858644933
[2025-10-25 10:16:20] 2025-10-25 15:16:20,395 [wrapper] cleanup supervisor_pilot 1359331 1318772
[2025-10-25 10:16:20] 2025-10-25 15:16:20,396 [wrapper] Test setup, not cleaning
[2025-10-25 10:16:20] 2025-10-25 15:16:20,398 [wrapper] apfmon messages muted
[2025-10-25 10:16:20] 2025-10-25 15:16:20,399 [wrapper] ==== wrapper stdout END ====
[2025-10-25 10:16:20] 2025-10-25 15:16:20,400 [wrapper] ==== wrapper stderr END ====
[2025-10-25 10:16:20]  *** Error codes and diagnostics ***
[2025-10-25 10:16:20]     "exeErrorCode": 0,
[2025-10-25 10:16:20]     "exeErrorDiag": "",
[2025-10-25 10:16:20]     "pilotErrorCode": 0,
[2025-10-25 10:16:20]     "pilotErrorDiag": "",
[2025-10-25 10:16:20]  *** Listing of results directory ***
[2025-10-25 10:16:20] total 430656
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc    557409 Oct 25 02:34 pilot3.tar.gz
[2025-10-25 10:16:20] -rwx------. 1 boinc boinc     36292 Oct 25 02:39 runpilot2-wrapper.sh
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc      5112 Oct 25 02:39 queuedata.json
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc       100 Oct 25 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 10:16:20] -rwxr-xr-x. 1 boinc boinc      7986 Oct 25 09:44 run_atlas
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc       105 Oct 25 09:44 job.xml
[2025-10-25 10:16:20] -rw-r--r--. 2 boinc boinc 228438314 Oct 25 09:44 EVNT.46771634._004912.pool.root.1
[2025-10-25 10:16:20] -rw-r--r--. 2 boinc boinc     15120 Oct 25 09:44 start_atlas.sh
[2025-10-25 10:16:20] drwxrwx--x. 1 boinc boinc        76 Oct 25 09:44 shared
[2025-10-25 10:16:20] -rw-r--r--. 2 boinc boinc    569689 Oct 25 09:44 input.tar.gz
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc     10054 Oct 25 09:44 init_data.xml
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc         0 Oct 25 09:44 boinc_setup_complete
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc         0 Oct 25 09:44 boinc_lockfile
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc      2562 Oct 25 09:44 pandaJob.out
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc    978288 Oct 25 09:44 agis_schedconf.cvmfs.json
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc   1560772 Oct 25 09:44 agis_ddmendpoints.agis.ALL.json
[2025-10-25 10:16:20] drwx------. 1 boinc boinc       414 Oct 25 09:44 pilot3
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc       529 Oct 25 10:14 boinc_task_state.xml
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc 207363024 Oct 25 10:14 HITS.46771637._132599.pool.root.1
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc      1027 Oct 25 10:15 memory_monitor_summary.json
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc    336259 Oct 25 10:15 log.46771637._132599.job.log.tgz.1
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc        95 Oct 25 10:15 pilot_heartbeat.json
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc      7794 Oct 25 10:15 heartbeat.json
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc      8192 Oct 25 10:16 boinc_mmap_file
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc        27 Oct 25 10:16 wrapper_checkpoint.txt
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc      4750 Oct 25 10:16 pilotlog.txt
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc    311391 Oct 25 10:16 log.46771637._132599.job.log.1
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc       357 Oct 25 10:16 output.list
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc       620 Oct 25 10:16 runtime_log
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc    665600 Oct 25 10:16 result.tar.gz
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc       651 Oct 25 10:16 TztMDmQ3nW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7MEODmEnV5Wn.diag
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc      8727 Oct 25 10:16 runtime_log.err
[2025-10-25 10:16:20] -rw-r--r--. 1 boinc boinc     21353 Oct 25 10:16 stderr.txt
[2025-10-25 10:16:20] HITS file was successfully produced:
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc 207363024 Oct 25 10:14 shared/HITS.pool.root.1
[2025-10-25 10:16:20]  *** Contents of shared directory: ***
[2025-10-25 10:16:20] total 426820
[2025-10-25 10:16:20] -rw-r--r--. 2 boinc boinc 228438314 Oct 25 09:44 ATLAS.root_0
[2025-10-25 10:16:20] -rw-r--r--. 2 boinc boinc     15120 Oct 25 09:44 start_atlas.sh
[2025-10-25 10:16:20] -rw-r--r--. 2 boinc boinc    569689 Oct 25 09:44 input.tar.gz
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc 207363024 Oct 25 10:14 HITS.pool.root.1
[2025-10-25 10:16:20] -rw-------. 1 boinc boinc    665600 Oct 25 10:16 result.tar.gz
10:16:21 (1314871): run_atlas exited; CPU time 19839.165615
10:16:21 (1314871): called boinc_finish(0)

</stderr_txt>
]]>

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