Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
11:18:33 (357396): wrapper (7.7.26015): starting
11:18:33 (357396): wrapper: running run_atlas (--nthreads 4)
[2025-10-25 11:18:33] Arguments: --nthreads 4
[2025-10-25 11:18:33] Threads: 4
[2025-10-25 11:18:33] Checking for CVMFS
[2025-10-25 11:18:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 11:18:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 11:18:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 11:18:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 11:18:33] 2.11.5.0 51530 2651 127172 152121 2 188 3948620 4096001 6454 130560 0 12480845 99.998 103083 3756 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-25 11:18:33] CVMFS is ok
[2025-10-25 11:18:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 11:18:33] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-25 11:18:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-25 11:18:33] Further information can be found at the LHC@home message board.
[2025-10-25 11:18:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 11:18:33] Checking for apptainer binary...
[2025-10-25 11:18:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 11:18:33] Running /usr/bin/apptainer --version
[2025-10-25 11:18:33] apptainer version 1.4.3
[2025-10-25 11:18:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 11:18:34] x32-linux3
[2025-10-25 11:18:34] apptainer works
[2025-10-25 11:18:34] Set ATHENA_PROC_NUMBER=4
[2025-10-25 11:18:34] Set ATHENA_CORE_NUMBER=4
[2025-10-25 11:18:34] Starting ATLAS job with PandaID=6858715072
[2025-10-25 11:18:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 13:17:59]  *** The last 200 lines of the pilot log: ***
[2025-10-25 13:17:59] 2025-10-25 17:17:20,881 | INFO     | fitting pss+swap vs Time
[2025-10-25 13:17:59] 2025-10-25 17:17:20,881 | INFO     | sum of square deviations: 496597218.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,882 | INFO     | sum of deviations: 4663492761.000003
[2025-10-25 13:17:59] 2025-10-25 17:17:20,882 | INFO     | mean x: 1761409083.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,882 | INFO     | mean y: 2281834.0854700855
[2025-10-25 13:17:59] 2025-10-25 17:17:20,882 | INFO     | -- intersect: -16538927439.725147
[2025-10-25 13:17:59] 2025-10-25 17:17:20,882 | INFO     | intersect: -16538927439.725147
[2025-10-25 13:17:59] 2025-10-25 17:17:20,882 | INFO     | chi2: 1.767433597610692
[2025-10-25 13:17:59] 2025-10-25 17:17:20,883 | INFO     | sum of square deviations: 435610028.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,883 | INFO     | sum of deviations: 10838982091.000002
[2025-10-25 13:17:59] 2025-10-25 17:17:20,883 | INFO     | mean x: 1761408930.5
[2025-10-25 13:17:59] 2025-10-25 17:17:20,883 | INFO     | mean y: 2296697.839285714
[2025-10-25 13:17:59] 2025-10-25 17:17:20,883 | INFO     | -- intersect: -43825619615.91685
[2025-10-25 13:17:59] 2025-10-25 17:17:20,883 | INFO     | intersect: -43825619615.91685
[2025-10-25 13:17:59] 2025-10-25 17:17:20,884 | INFO     | chi2: 1.0957090638645852
[2025-10-25 13:17:59] 2025-10-25 17:17:20,884 | INFO     | current chi2=1.0957090638645852 (change=38.005644718657535 %)
[2025-10-25 13:17:59] 2025-10-25 17:17:20,884 | INFO     | sum of square deviations: 379832238.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,884 | INFO     | sum of deviations: 10208198842.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,884 | INFO     | mean x: 1761408778.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,884 | INFO     | mean y: 2294972.214953271
[2025-10-25 13:17:59] 2025-10-25 17:17:20,885 | INFO     | -- intersect: -47336527931.66988
[2025-10-25 13:17:59] 2025-10-25 17:17:20,885 | INFO     | intersect: -47336527931.66988
[2025-10-25 13:17:59] 2025-10-25 17:17:20,885 | INFO     | chi2: 1.0974704841082699
[2025-10-25 13:17:59] 2025-10-25 17:17:20,885 | INFO     | current chi2=1.0974704841082699 (change=-0.1607561990472253 %)
[2025-10-25 13:17:59] 2025-10-25 17:17:20,885 | INFO     | right removable region: 106
[2025-10-25 13:17:59] 2025-10-25 17:17:20,885 | INFO     | sum of square deviations: 435610028.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,886 | INFO     | sum of deviations: -5336171420.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,886 | INFO     | mean x: 1761409235.5
[2025-10-25 13:17:59] 2025-10-25 17:17:20,886 | INFO     | mean y: 2306035.839285714
[2025-10-25 13:17:59] 2025-10-25 17:17:20,886 | INFO     | -- intersect: 21579361239.44252
[2025-10-25 13:17:59] 2025-10-25 17:17:20,886 | INFO     | intersect: 21579361239.44252
[2025-10-25 13:17:59] 2025-10-25 17:17:20,886 | INFO     | chi2: 0.6989933374690233
[2025-10-25 13:17:59] 2025-10-25 17:17:20,886 | INFO     | current chi2=0.6989933374690233 (change=60.451507857836454 %)
[2025-10-25 13:17:59] 2025-10-25 17:17:20,886 | INFO     | sum of square deviations: 379832238.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,887 | INFO     | sum of deviations: -4900284147.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,887 | INFO     | mean x: 1761409388.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,887 | INFO     | mean y: 2304891.3177570095
[2025-10-25 13:17:59] 2025-10-25 17:17:20,887 | INFO     | -- intersect: 22726564806.278877
[2025-10-25 13:17:59] 2025-10-25 17:17:20,887 | INFO     | intersect: 22726564806.278877
[2025-10-25 13:17:59] 2025-10-25 17:17:20,887 | INFO     | chi2: 0.6973737096089695
[2025-10-25 13:17:59] 2025-10-25 17:17:20,888 | INFO     | current chi2=0.6973737096089695 (change=0.2317086262822267 %)
[2025-10-25 13:17:59] 2025-10-25 17:17:20,888 | INFO     | left removable region: 20
[2025-10-25 13:17:59] 2025-10-25 17:17:20,888 | INFO     | sum of square deviations: 197203697.5
[2025-10-25 13:17:59] 2025-10-25 17:17:20,888 | INFO     | sum of deviations: 620961944.0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,888 | INFO     | mean x: 1761409357.5
[2025-10-25 13:17:59] 2025-10-25 17:17:20,888 | INFO     | mean y: 2322881.5581395347
[2025-10-25 13:17:59] 2025-10-25 17:17:20,888 | INFO     | -- intersect: -5544064902.641449
[2025-10-25 13:17:59] 2025-10-25 17:17:20,888 | INFO     | intersect: -5544064902.641449
[2025-10-25 13:17:59] 2025-10-25 17:17:20,888 | INFO     | chi2: 0.00010130027729462068
[2025-10-25 13:17:59] 2025-10-25 17:17:20,889 | INFO     | -- intersect: -5544064902.641449
[2025-10-25 13:17:59] 2025-10-25 17:17:20,889 | INFO     | current memory leak: 3.15 B/s (using 86 data points, chi2=0.00)
[2025-10-25 13:17:59] 2025-10-25 17:17:20,889 | INFO     | could have reported an average CPU frequency of 3836 MHz (7 samples)
[2025-10-25 13:17:59] 2025-10-25 17:17:20,889 | INFO     | ..............................
[2025-10-25 13:17:59] 2025-10-25 17:17:20,889 | INFO     | . Timing measurements:
[2025-10-25 13:17:59] 2025-10-25 17:17:20,889 | INFO     | . get job = 0 s
[2025-10-25 13:17:59] 2025-10-25 17:17:20,889 | INFO     | . initial setup = 2 s
[2025-10-25 13:17:59] 2025-10-25 17:17:20,890 | INFO     | . payload setup = 3 s
[2025-10-25 13:17:59] 2025-10-25 17:17:20,890 | INFO     | . stage-in = 0 s
[2025-10-25 13:17:59] 2025-10-25 17:17:20,890 | INFO     | . payload execution = 7091 s
[2025-10-25 13:17:59] 2025-10-25 17:17:20,890 | INFO     | . stage-out = 0 s
[2025-10-25 13:17:59] 2025-10-25 17:17:20,890 | INFO     | . log creation = 0 s
[2025-10-25 13:17:59] 2025-10-25 17:17:20,890 | INFO     | ..............................
[2025-10-25 13:17:59] 2025-10-25 17:17:20,955 | INFO     | 
[2025-10-25 13:17:59] 2025-10-25 17:17:20,955 | INFO     | job summary report
[2025-10-25 13:17:59] 2025-10-25 17:17:20,955 | INFO     | --------------------------------------------------
[2025-10-25 13:17:59] 2025-10-25 17:17:20,956 | INFO     | PanDA job id: 6858715072
[2025-10-25 13:17:59] 2025-10-25 17:17:20,956 | INFO     | task id: 46964970
[2025-10-25 13:17:59] 2025-10-25 17:17:20,956 | INFO     | errors: (none)
[2025-10-25 13:17:59] 2025-10-25 17:17:20,956 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 13:17:59] 2025-10-25 17:17:20,956 | INFO     | pilot state: finished 
[2025-10-25 13:17:59] 2025-10-25 17:17:20,956 | INFO     | transexitcode: 0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,956 | INFO     | exeerrorcode: 0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,956 | INFO     | exeerrordiag: 
[2025-10-25 13:17:59] 2025-10-25 17:17:20,956 | INFO     | exitcode: 0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,956 | INFO     | exitmsg: OK
[2025-10-25 13:17:59] 2025-10-25 17:17:20,957 | INFO     | cpuconsumptiontime: 27400 s
[2025-10-25 13:17:59] 2025-10-25 17:17:20,957 | INFO     | nevents: 400
[2025-10-25 13:17:59] 2025-10-25 17:17:20,957 | INFO     | neventsw: 0
[2025-10-25 13:17:59] 2025-10-25 17:17:20,957 | INFO     | pid: 367883
[2025-10-25 13:17:59] 2025-10-25 17:17:20,957 | INFO     | pgrp: 367883
[2025-10-25 13:17:59] 2025-10-25 17:17:20,957 | INFO     | corecount: 4
[2025-10-25 13:17:59] 2025-10-25 17:17:20,957 | INFO     | event service: False
[2025-10-25 13:17:59] 2025-10-25 17:17:20,957 | INFO     | sizes: {0: 2348989, 3: 2349251, 11: 2349279, 7099: 2376673, 7100: 2376672, 7101: 2385740, 7102: 2385924, 7105: 2386118}
[2025-10-25 13:17:59] 2025-10-25 17:17:20,957 | INFO     | --------------------------------------------------
[2025-10-25 13:17:59] 2025-10-25 17:17:20,957 | INFO     | 
[2025-10-25 13:17:59] 2025-10-25 17:17:20,957 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-10-25 13:17:59] 2025-10-25 17:17:20,973 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,973 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,973 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,973 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,974 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,974 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,975 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 13:17:59] 2025-10-25 17:17:20,975 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,975 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 13:17:59] 2025-10-25 17:17:20,975 | INFO     | job 6858715072 has completed (purged errors)
[2025-10-25 13:17:59] 2025-10-25 17:17:20,975 | INFO     | overall cleanup function is called
[2025-10-25 13:17:59] 2025-10-25 17:17:20,990 | INFO     | number of running child processes to parent process 367883: 1
[2025-10-25 13:17:59] 2025-10-25 17:17:20,990 | INFO     | maximum number of monitored processes: 6
[2025-10-25 13:17:59] 2025-10-25 17:17:20,990 | INFO     | aborting job monitoring since job object (job id=6858715072) has expired
[2025-10-25 13:17:59] 2025-10-25 17:17:21,982 | INFO     | --- collectZombieJob: --- 10, [367883]
[2025-10-25 13:17:59] 2025-10-25 17:17:21,982 | INFO     | zombie collector waiting for pid 367883
[2025-10-25 13:17:59] 2025-10-25 17:17:21,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 13:17:59] 2025-10-25 17:17:21,982 | INFO     | collected zombie processes
[2025-10-25 13:17:59] 2025-10-25 17:17:21,982 | INFO     | will attempt to kill all subprocesses of pid=367883
[2025-10-25 13:17:59] 2025-10-25 17:17:22,098 | INFO     | process IDs to be killed: [367883] (in reverse order)
[2025-10-25 13:17:59] 2025-10-25 17:17:22,149 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 13:17:59] 2025-10-25 17:17:22,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 13:17:59] 2025-10-25 17:17:22,153 | INFO     | did not find any defunct processes belonging to 367883
[2025-10-25 13:17:59] 2025-10-25 17:17:22,156 | INFO     | did not find any defunct processes belonging to 367883
[2025-10-25 13:17:59] 2025-10-25 17:17:22,157 | INFO     | ready for new job
[2025-10-25 13:17:59] 2025-10-25 17:17:22,157 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 13:17:59] 2025-10-25 17:17:22,158 | INFO     | ***************************************
[2025-10-25 13:17:59] 2025-10-25 17:17:22,158 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 13:17:59] 2025-10-25 17:17:22,158 | INFO     | ***************************************
[2025-10-25 13:17:59] 2025-10-25 17:17:22,158 | INFO     | 
[2025-10-25 13:17:59] 2025-10-25 17:17:22,180 | INFO     | architecture information:
[2025-10-25 13:17:59] 2025-10-25 17:17:22,180 | INFO     | executing command: cat /etc/os-release
[2025-10-25 13:17:59] 2025-10-25 17:17:22,192 | INFO     | cat /etc/os-release:
[2025-10-25 13:17:59] NAME="CentOS Linux"
[2025-10-25 13:17:59] VERSION="7 (Core)"
[2025-10-25 13:17:59] ID="centos"
[2025-10-25 13:17:59] ID_LIKE="rhel fedora"
[2025-10-25 13:17:59] VERSION_ID="7"
[2025-10-25 13:17:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 13:17:59] ANSI_COLOR="0;31"
[2025-10-25 13:17:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 13:17:59] HOME_URL="https://www.centos.org/"
[2025-10-25 13:17:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 13:17:59] 
[2025-10-25 13:17:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 13:17:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 13:17:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 13:17:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 13:17:59] 
[2025-10-25 13:17:59] 2025-10-25 17:17:22,192 | INFO     | ***************************************
[2025-10-25 13:17:59] 2025-10-25 17:17:22,695 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-10-25 13:17:59] 2025-10-25 17:17:22,709 | INFO     | sufficient remaining disk space (397810860032 B)
[2025-10-25 13:17:59] 2025-10-25 17:17:22,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 13:17:59] 2025-10-25 17:17:22,709 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 13:17:59] 2025-10-25 17:17:22,709 | INFO     | update_server=False
[2025-10-25 13:17:59] 2025-10-25 17:17:22,709 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 13:17:59] 2025-10-25 17:17:22,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 13:17:59] 2025-10-25 17:17:22,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 13:17:59] 2025-10-25 17:17:22,710 | INFO     | aborting loop
[2025-10-25 13:17:59] 2025-10-25 17:17:22,785 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 13:17:59] 2025-10-25 17:17:23,009 | INFO     | all data control threads have been joined
[2025-10-25 13:17:59] 2025-10-25 17:17:23,029 | INFO     | all payload control threads have been joined
[2025-10-25 13:17:59] 2025-10-25 17:17:23,714 | INFO     | [job] retrieve thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:23,715 | INFO     | [job] queue monitor thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:23,715 | INFO     | [job] job monitor thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:23,993 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:24,001 | INFO     | [data] copytool_in thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:24,014 | INFO     | [data] control thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:24,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 13:17:59] 2025-10-25 17:17:24,034 | INFO     | [payload] control thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:24,058 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:24,314 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:24,371 | INFO     | all job control threads have been joined
[2025-10-25 13:17:59] 2025-10-25 17:17:24,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:24,786 | INFO     | [data] copytool_out thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:24,802 | INFO     | [payload] failed_post thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:25,034 | INFO     | [payload] validate_post thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:25,210 | INFO     | [job] validate thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:25,376 | INFO     | [job] control thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:28,026 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 13:17:59] 2025-10-25 17:17:52,867 | INFO     | PID=361237 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-25 13:17:59] 2025-10-25 17:17:52,867 | INFO     | .. there are 6 such processes running
[2025-10-25 13:17:59] 2025-10-25 17:17:52,867 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 13:17:59] 2025-10-25 17:17:52,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 13:17:59] 2025-10-25 17:17:52,867 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 13:17:59] 2025-10-25 17:17:53,598 | INFO     | [monitor] cgroup control has ended
[2025-10-25 13:17:59] 2025-10-25 17:17:54,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139997505472320)>', '<ExcThread(monitor, started 139996933646080)>']
[2025-10-25 13:17:59] 2025-10-25 17:17:54,874 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 13:17:59] 2025-10-25 17:17:54,874 | INFO     | [monitor] control thread has ended
[2025-10-25 13:17:59] 2025-10-25 17:17:59,670 | INFO     | all workflow threads have been joined
[2025-10-25 13:17:59] 2025-10-25 17:17:59,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 13:17:59] 2025-10-25 17:17:59,670 | INFO     | traces error code: 0
[2025-10-25 13:17:59] 2025-10-25 17:17:59,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 13:17:59] 2025-10-25 17:17:59,752 [wrapper] ==== pilot stdout END ====
[2025-10-25 13:17:59] 2025-10-25 17:17:59,754 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 13:17:59] 2025-10-25 17:17:59,756 [wrapper] pilotpid: 361237
[2025-10-25 13:17:59] 2025-10-25 17:17:59,758 [wrapper] Pilot exit status: 0
[2025-10-25 13:17:59] 2025-10-25 17:17:59,765 [wrapper] pandaids: 6858715072
[2025-10-25 13:17:59] 2025-10-25 17:17:59,795 [wrapper] cleanup supervisor_pilot  529027 361238
[2025-10-25 13:17:59] 2025-10-25 17:17:59,798 [wrapper] Test setup, not cleaning
[2025-10-25 13:17:59] 2025-10-25 17:17:59,800 [wrapper] apfmon messages muted
[2025-10-25 13:17:59] 2025-10-25 17:17:59,801 [wrapper] ==== wrapper stdout END ====
[2025-10-25 13:17:59] 2025-10-25 17:17:59,803 [wrapper] ==== wrapper stderr END ====
[2025-10-25 13:17:59]  *** Error codes and diagnostics ***
[2025-10-25 13:17:59]     "exeErrorCode": 0,
[2025-10-25 13:17:59]     "exeErrorDiag": "",
[2025-10-25 13:17:59]     "pilotErrorCode": 0,
[2025-10-25 13:17:59]     "pilotErrorDiag": "",
[2025-10-25 13:17:59]  *** Listing of results directory ***
[2025-10-25 13:17:59] total 454228
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc    557409 Oct 25 00:39 pilot3.tar.gz
[2025-10-25 13:17:59] -rwx------ 1 boinc boinc     36292 Oct 25 00:53 runpilot2-wrapper.sh
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc      5112 Oct 25 00:53 queuedata.json
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc       100 Oct 25 11:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 13:17:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 11:18 run_atlas
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc       105 Oct 25 11:18 job.xml
[2025-10-25 13:17:59] -rw-r--r-- 2 boinc boinc     15120 Oct 25 11:18 start_atlas.sh
[2025-10-25 13:17:59] drwxrwx--x 2 boinc boinc      4096 Oct 25 11:18 shared
[2025-10-25 13:17:59] -rw-r--r-- 2 boinc boinc    569682 Oct 25 11:18 input.tar.gz
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc      9157 Oct 25 11:18 init_data.xml
[2025-10-25 13:17:59] -rw-r--r-- 2 boinc boinc 267475461 Oct 25 11:18 EVNT.46964963._000052.pool.root.1
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc         0 Oct 25 11:18 boinc_setup_complete
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc         0 Oct 25 11:18 boinc_lockfile
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc      2597 Oct 25 11:18 pandaJob.out
[2025-10-25 13:17:59] -rw------- 1 boinc boinc    978288 Oct 25 11:18 agis_schedconf.cvmfs.json
[2025-10-25 13:17:59] -rw------- 1 boinc boinc   1560772 Oct 25 11:18 agis_ddmendpoints.agis.ALL.json
[2025-10-25 13:17:59] drwx------ 5 boinc boinc      4096 Oct 25 11:18 pilot3
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc       529 Oct 25 13:16 boinc_task_state.xml
[2025-10-25 13:17:59] -rw------- 1 boinc boinc 191092935 Oct 25 13:16 HITS.46964970._001309.pool.root.1
[2025-10-25 13:17:59] -rw------- 1 boinc boinc      1032 Oct 25 13:17 memory_monitor_summary.json
[2025-10-25 13:17:59] -rw------- 1 boinc boinc    295888 Oct 25 13:17 log.46964970._001309.job.log.tgz.1
[2025-10-25 13:17:59] -rw------- 1 boinc boinc      7728 Oct 25 13:17 heartbeat.json
[2025-10-25 13:17:59] -rw------- 1 boinc boinc        95 Oct 25 13:17 pilot_heartbeat.json
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc      8192 Oct 25 13:17 boinc_mmap_file
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc        27 Oct 25 13:17 wrapper_checkpoint.txt
[2025-10-25 13:17:59] -rw------- 1 boinc boinc      4830 Oct 25 13:17 pilotlog.txt
[2025-10-25 13:17:59] -rw------- 1 boinc boinc   1031260 Oct 25 13:17 log.46964970._001309.job.log.1
[2025-10-25 13:17:59] -rw------- 1 boinc boinc       357 Oct 25 13:17 output.list
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc       620 Oct 25 13:17 runtime_log
[2025-10-25 13:17:59] -rw------- 1 boinc boinc   1341440 Oct 25 13:17 result.tar.gz
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc      8764 Oct 25 13:17 runtime_log.err
[2025-10-25 13:17:59] -rw------- 1 boinc boinc       644 Oct 25 13:17 haGODmaSlW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmU7DODmjdMQRm.diag
[2025-10-25 13:17:59] -rw-r--r-- 1 boinc boinc     20998 Oct 25 13:17 stderr.txt
[2025-10-25 13:17:59] HITS file was successfully produced:
[2025-10-25 13:17:59] -rw------- 1 boinc boinc 191092935 Oct 25 13:16 shared/HITS.pool.root.1
[2025-10-25 13:17:59]  *** Contents of shared directory: ***
[2025-10-25 13:17:59] total 449720
[2025-10-25 13:17:59] -rw-r--r-- 2 boinc boinc     15120 Oct 25 11:18 start_atlas.sh
[2025-10-25 13:17:59] -rw-r--r-- 2 boinc boinc    569682 Oct 25 11:18 input.tar.gz
[2025-10-25 13:17:59] -rw-r--r-- 2 boinc boinc 267475461 Oct 25 11:18 ATLAS.root_0
[2025-10-25 13:17:59] -rw------- 1 boinc boinc 191092935 Oct 25 13:16 HITS.pool.root.1
[2025-10-25 13:17:59] -rw------- 1 boinc boinc   1341440 Oct 25 13:17 result.tar.gz
13:18:01 (357396): run_atlas exited; CPU time 27481.661944
13:18:01 (357396): called boinc_finish(0)

</stderr_txt>
]]>

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