Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:52:05 (2776373): wrapper (7.7.26015): starting
23:52:05 (2776373): wrapper: running run_atlas (--nthreads 12)
[2025-10-25 23:52:05] Arguments: --nthreads 12
[2025-10-25 23:52:05] Threads: 12
[2025-10-25 23:52:05] Checking for CVMFS
[2025-10-25 23:52:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 23:52:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 23:52:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 23:52:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 23:52:06] 2.13.2.0 1918225 17581 195044 152131 2 351 30673510 46080001 48969 130560 0 113940480 99.959 13807856 23582 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-25 23:52:06] CVMFS is ok
[2025-10-25 23:52:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 23:52:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 23:52:07] Further information can be found at the LHC@home message board.
[2025-10-25 23:52:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 23:52:07] Checking for apptainer binary...
[2025-10-25 23:52:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 23:52:07] Running /usr/bin/apptainer --version
[2025-10-25 23:52:07] apptainer version 1.4.2-1.el9
[2025-10-25 23:52:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 23:52:07] mff2104.farm.particle.cz
[2025-10-25 23:52:07] apptainer works
[2025-10-25 23:52:07] Set ATHENA_PROC_NUMBER=12
[2025-10-25 23:52:07] Set ATHENA_CORE_NUMBER=12
[2025-10-25 23:52:07] Starting ATLAS job with PandaID=6858688986
[2025-10-25 23:52:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-26 01:15:44]  *** The last 200 lines of the pilot log: ***
[2025-10-26 01:15:44] 2025-10-25 23:09:08,902 | INFO     | preparing for final server update for job 6858688986 in state='finished'
[2025-10-26 01:15:44] 2025-10-25 23:09:08,902 | INFO     | this job has now completed (state=finished)
[2025-10-26 01:15:44] 2025-10-25 23:09:08,902 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-26 01:15:44] 2025-10-25 23:09:08,902 | INFO     | log transfer has been attempted: DONE
[2025-10-26 01:15:44] 2025-10-25 23:09:08,902 | INFO     | job 6858688986 has finished - writing final server update
[2025-10-26 01:15:44] 2025-10-25 23:09:08,902 | INFO     | total number of processed events: 400 (read)
[2025-10-26 01:15:44] 2025-10-25 23:09:08,914 | INFO     | executing command: lscpu
[2025-10-26 01:15:44] 2025-10-25 23:09:09,016 | INFO     | monitor loop #329: job 0:6858688986 is in state 'finished'
[2025-10-26 01:15:44] 2025-10-25 23:09:09,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:15:44] 2025-10-25 23:09:09,076 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-26 01:15:44] 2025-10-25 23:09:09,737 | INFO     | time since job start (4526s) is within the limit (172800.0s)
[2025-10-26 01:15:44] 2025-10-25 23:09:11,522 | INFO     | monitor loop #330: job 0:6858688986 is in state 'finished'
[2025-10-26 01:15:44] 2025-10-25 23:09:11,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:15:44] 2025-10-25 23:09:11,744 | INFO     | time since job start (4528s) is within the limit (172800.0s)
[2025-10-26 01:15:44] 2025-10-25 23:09:13,580 | INFO     | PID=2787371 has CPU usage=18.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-26 01:15:44] 2025-10-25 23:09:13,580 | INFO     | .. there are 80 such processes running
[2025-10-26 01:15:44] 2025-10-25 23:09:14,031 | INFO     | monitor loop #331: job 0:6858688986 is in state 'finished'
[2025-10-26 01:15:44] 2025-10-25 23:09:14,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:15:44] 2025-10-25 23:09:14,582 | INFO     | time since job start (4531s) is within the limit (172800.0s)
[2025-10-26 01:15:44] 2025-10-25 23:09:16,536 | INFO     | monitor loop #332: job 0:6858688986 is in state 'finished'
[2025-10-26 01:15:44] 2025-10-25 23:09:16,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:15:44] 2025-10-25 23:09:16,589 | INFO     | time since job start (4533s) is within the limit (172800.0s)
[2025-10-26 01:15:44] 2025-10-25 23:09:18,596 | INFO     | time since job start (4535s) is within the limit (172800.0s)
[2025-10-26 01:15:44] 2025-10-25 23:09:19,039 | INFO     | monitor loop #333: job 0:6858688986 is in state 'finished'
[2025-10-26 01:15:44] 2025-10-25 23:09:19,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:15:44] 2025-10-25 23:09:20,604 | INFO     | time since job start (4537s) is within the limit (172800.0s)
[2025-10-26 01:15:44] 2025-10-25 23:09:21,544 | INFO     | monitor loop #334: job 0:6858688986 is in state 'finished'
[2025-10-26 01:15:44] 2025-10-25 23:09:21,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:15:44] 2025-10-25 23:09:22,610 | INFO     | time since job start (4539s) is within the limit (172800.0s)
[2025-10-26 01:15:44] 2025-10-25 23:09:24,048 | INFO     | monitor loop #335: job 0:6858688986 is in state 'finished'
[2025-10-26 01:15:44] 2025-10-25 23:09:24,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:15:44] 2025-10-25 23:09:24,616 | INFO     | time since job start (4541s) is within the limit (172800.0s)
[2025-10-26 01:15:44] 2025-10-25 23:09:26,553 | INFO     | monitor loop #336: job 0:6858688986 is in state 'finished'
[2025-10-26 01:15:44] 2025-10-25 23:09:26,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:15:44] 2025-10-25 23:09:26,623 | INFO     | time since job start (4543s) is within the limit (172800.0s)
[2025-10-26 01:15:44] 2025-10-25 23:09:26,937 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-26 01:15:44] 2025-10-25 23:09:26,954 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2895.714395833333
[2025-10-26 01:15:44] 2025-10-25 23:09:26,972 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6858688986/memory_monitor_summary.json (trf name=prmon)
[2025-10-26 01:15:44] 2025-10-25 23:09:26,973 | INFO     | extracted standard info from prmon json
[2025-10-26 01:15:44] 2025-10-25 23:09:26,973 | INFO     | extracted standard memory fields from prmon json
[2025-10-26 01:15:44] 2025-10-25 23:09:26,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-26 01:15:44] 2025-10-25 23:09:26,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-26 01:15:44] 2025-10-25 23:09:26,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-26 01:15:44] 2025-10-25 23:09:26,975 | INFO     | fitting pss+swap vs Time
[2025-10-26 01:15:44] 2025-10-25 23:09:26,976 | INFO     | sum of square deviations: 81266640.0
[2025-10-26 01:15:44] 2025-10-25 23:09:26,976 | INFO     | sum of deviations: 1374965315.0
[2025-10-26 01:15:44] 2025-10-25 23:09:26,976 | INFO     | mean x: 1761431651.5
[2025-10-26 01:15:44] 2025-10-25 23:09:26,976 | INFO     | mean y: 2705734.875
[2025-10-26 01:15:44] 2025-10-25 23:09:26,976 | INFO     | -- intersect: -29799282209.448376
[2025-10-26 01:15:44] 2025-10-25 23:09:26,976 | INFO     | intersect: -29799282209.448376
[2025-10-26 01:15:44] 2025-10-25 23:09:26,977 | INFO     | chi2: 0.0021977126417993525
[2025-10-26 01:15:44] 2025-10-25 23:09:26,977 | INFO     | -- intersect: -29799282209.448376
[2025-10-26 01:15:44] 2025-10-25 23:09:26,977 | INFO     | current memory leak: 16.92 B/s (using 64 data points, chi2=0.00)
[2025-10-26 01:15:44] 2025-10-25 23:09:26,977 | INFO     | could have reported an average CPU frequency of 2823 MHz (6 samples)
[2025-10-26 01:15:44] 2025-10-25 23:09:26,977 | INFO     | ..............................
[2025-10-26 01:15:44] 2025-10-25 23:09:26,977 | INFO     | . Timing measurements:
[2025-10-26 01:15:44] 2025-10-25 23:09:26,977 | INFO     | . get job = 0 s
[2025-10-26 01:15:44] 2025-10-25 23:09:26,978 | INFO     | . initial setup = 5 s
[2025-10-26 01:15:44] 2025-10-25 23:09:26,978 | INFO     | . payload setup = 60 s
[2025-10-26 01:15:44] 2025-10-25 23:09:26,978 | INFO     | . stage-in = 0 s
[2025-10-26 01:15:44] 2025-10-25 23:09:26,978 | INFO     | . payload execution = 4355 s
[2025-10-26 01:15:44] 2025-10-25 23:09:26,978 | INFO     | . stage-out = 1 s
[2025-10-26 01:15:44] 2025-10-25 23:09:26,978 | INFO     | . log creation = 0 s
[2025-10-26 01:15:44] 2025-10-25 23:09:26,978 | INFO     | ..............................
[2025-10-26 01:15:44] 2025-10-25 23:09:27,077 | INFO     | 
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | job summary report
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | --------------------------------------------------
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | PanDA job id: 6858688986
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | task id: 46771637
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | errors: (none)
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | pilot state: finished 
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | transexitcode: 0
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | exeerrorcode: 0
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | exeerrordiag: 
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | exitcode: 0
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | exitmsg: OK
[2025-10-26 01:15:44] 2025-10-25 23:09:27,078 | INFO     | cpuconsumptiontime: 40578 s
[2025-10-26 01:15:44] 2025-10-25 23:09:27,079 | INFO     | nevents: 400
[2025-10-26 01:15:44] 2025-10-25 23:09:27,079 | INFO     | neventsw: 0
[2025-10-26 01:15:44] 2025-10-25 23:09:27,079 | INFO     | pid: 2808024
[2025-10-26 01:15:44] 2025-10-25 23:09:27,079 | INFO     | pgrp: 2808024
[2025-10-26 01:15:44] 2025-10-25 23:09:27,079 | INFO     | corecount: 12
[2025-10-26 01:15:44] 2025-10-25 23:09:27,079 | INFO     | event service: False
[2025-10-26 01:15:44] 2025-10-25 23:09:27,079 | INFO     | sizes: {0: 2348714, 1: 2348913, 12: 2348913, 23: 2348941, 33: 2348969, 44: 2349415, 55: 2349443, 4420: 2375621, 4422: 2384621, 4423: 2384677, 4444: 2384871}
[2025-10-26 01:15:44] 2025-10-25 23:09:27,079 | INFO     | --------------------------------------------------
[2025-10-26 01:15:44] 2025-10-25 23:09:27,079 | INFO     | 
[2025-10-26 01:15:44] 2025-10-25 23:09:27,079 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-10-26 01:15:44] 2025-10-25 23:09:27,136 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,137 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,137 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,137 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,138 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-26 01:15:44] 2025-10-25 23:09:27,139 | INFO     | job 6858688986 has completed (purged errors)
[2025-10-26 01:15:44] 2025-10-25 23:09:27,139 | INFO     | overall cleanup function is called
[2025-10-26 01:15:44] 2025-10-25 23:09:28,150 | INFO     | --- collectZombieJob: --- 10, [2808024]
[2025-10-26 01:15:44] 2025-10-25 23:09:28,151 | INFO     | zombie collector waiting for pid 2808024
[2025-10-26 01:15:44] 2025-10-25 23:09:28,151 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-26 01:15:44] 2025-10-25 23:09:28,151 | INFO     | collected zombie processes
[2025-10-26 01:15:44] 2025-10-25 23:09:28,151 | INFO     | will attempt to kill all subprocesses of pid=2808024
[2025-10-26 01:15:44] 2025-10-25 23:09:28,754 | INFO     | process IDs to be killed: [2808024] (in reverse order)
[2025-10-26 01:15:44] 2025-10-25 23:09:29,025 | WARNING  | found no corresponding commands to process id(s)
[2025-10-26 01:15:44] 2025-10-25 23:09:29,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-26 01:15:44] 2025-10-25 23:09:29,053 | INFO     | did not find any defunct processes belonging to 2808024
[2025-10-26 01:15:44] 2025-10-25 23:09:29,080 | INFO     | did not find any defunct processes belonging to 2808024
[2025-10-26 01:15:44] 2025-10-25 23:09:29,080 | INFO     | ready for new job
[2025-10-26 01:15:44] 2025-10-25 23:09:29,080 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-26 01:15:44] 2025-10-25 23:09:29,082 | INFO     | ***************************************
[2025-10-26 01:15:44] 2025-10-25 23:09:29,082 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-26 01:15:44] 2025-10-25 23:09:29,082 | INFO     | ***************************************
[2025-10-26 01:15:44] 2025-10-25 23:09:29,082 | INFO     | 
[2025-10-26 01:15:44] 2025-10-25 23:09:29,088 | INFO     | architecture information:
[2025-10-26 01:15:44] 2025-10-25 23:09:29,089 | INFO     | executing command: cat /etc/os-release
[2025-10-26 01:15:44] 2025-10-25 23:09:29,190 | INFO     | cat /etc/os-release:
[2025-10-26 01:15:44] NAME="CentOS Linux"
[2025-10-26 01:15:44] VERSION="7 (Core)"
[2025-10-26 01:15:44] ID="centos"
[2025-10-26 01:15:44] ID_LIKE="rhel fedora"
[2025-10-26 01:15:44] VERSION_ID="7"
[2025-10-26 01:15:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-26 01:15:44] ANSI_COLOR="0;31"
[2025-10-26 01:15:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-26 01:15:44] HOME_URL="https://www.centos.org/"
[2025-10-26 01:15:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-26 01:15:44] 
[2025-10-26 01:15:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-26 01:15:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-26 01:15:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-26 01:15:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-26 01:15:44] 
[2025-10-26 01:15:44] 2025-10-25 23:09:29,191 | INFO     | ***************************************
[2025-10-26 01:15:44] 2025-10-25 23:09:29,694 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-10-26 01:15:44] 2025-10-25 23:09:29,733 | INFO     | sufficient remaining disk space (1678945288192 B)
[2025-10-26 01:15:44] 2025-10-25 23:09:29,733 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-26 01:15:44] 2025-10-25 23:09:29,734 | INFO     | current server update state: UPDATING_FINAL
[2025-10-26 01:15:44] 2025-10-25 23:09:29,734 | INFO     | update_server=False
[2025-10-26 01:15:44] 2025-10-25 23:09:29,734 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-26 01:15:44] 2025-10-25 23:09:30,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-26 01:15:44] 2025-10-25 23:09:30,063 | INFO     | aborting loop
[2025-10-26 01:15:44] 2025-10-25 23:09:30,194 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-26 01:15:44] 2025-10-25 23:09:30,276 | INFO     | all job control threads have been joined
[2025-10-26 01:15:44] 2025-10-25 23:09:30,523 | INFO     | all data control threads have been joined
[2025-10-26 01:15:44] 2025-10-25 23:09:30,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-26 01:15:44] 2025-10-25 23:09:30,739 | INFO     | [job] retrieve thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:30,873 | INFO     | all payload control threads have been joined
[2025-10-26 01:15:44] 2025-10-25 23:09:31,037 | INFO     | [payload] validate_pre thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:31,068 | INFO     | [job] job monitor thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:31,277 | INFO     | [payload] failed_post thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:31,282 | INFO     | [job] control thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:31,327 | INFO     | [payload] execute_payloads thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:31,363 | INFO     | [job] validate thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:31,528 | INFO     | [data] control thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:31,707 | INFO     | [data] copytool_in thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:31,744 | INFO     | [payload] validate_post thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:31,834 | INFO     | [job] create_data_payload thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:31,878 | INFO     | [payload] control thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:32,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-26 01:15:44] 2025-10-25 23:09:32,694 | INFO     | [data] copytool_out thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:33,097 | INFO     | [job] queue monitor thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:34,200 | INFO     | [data] queue_monitor thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:39,880 | INFO     | job.realtimelogging is not enabled
[2025-10-26 01:15:44] 2025-10-25 23:09:40,885 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-26 01:15:44] 2025-10-25 23:09:50,815 | INFO     | [monitor] cgroup control has ended
[2025-10-26 01:15:44] 2025-10-25 23:09:51,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394364942144)>', '<ExcThread(monitor, started 140393840613120)>']
[2025-10-26 01:15:44] 2025-10-25 23:09:56,411 | INFO     | all workflow threads have been joined
[2025-10-26 01:15:44] 2025-10-25 23:09:56,414 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-26 01:15:44] 2025-10-25 23:09:56,414 | INFO     | traces error code: 0
[2025-10-26 01:15:44] 2025-10-25 23:09:56,414 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-26 01:15:44] 2025-10-25 23:10:00,488 | INFO     | PID=2787371 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-26 01:15:44] 2025-10-25 23:10:00,488 | INFO     | .. there are 80 such processes running
[2025-10-26 01:15:44] 2025-10-25 23:10:00,488 | INFO     | found 0 job(s) in 20 queues
[2025-10-26 01:15:44] 2025-10-25 23:10:00,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-26 01:15:44] 2025-10-25 23:10:00,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-26 01:15:44] 2025-10-25 23:10:00,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-26 01:15:44] 2025-10-25 23:10:00,488 | INFO     | [monitor] control thread has ended
[2025-10-26 01:15:44] 2025-10-25 23:10:00,698 [wrapper] ==== pilot stdout END ====
[2025-10-26 01:15:44] 2025-10-25 23:10:00,703 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-26 01:15:44] 2025-10-25 23:10:00,708 [wrapper] pilotpid: 2787371
[2025-10-26 01:15:44] 2025-10-25 23:10:00,711 [wrapper] Pilot exit status: 0
[2025-10-26 01:15:44] 2025-10-25 23:10:00,727 [wrapper] pandaids: 6858688986
[2025-10-26 01:15:44] 2025-10-25 23:10:00,883 [wrapper] cleanup supervisor_pilot 3039255 2787372
[2025-10-26 01:15:44] 2025-10-25 23:10:00,889 [wrapper] Test setup, not cleaning
[2025-10-26 01:15:44] 2025-10-25 23:10:00,897 [wrapper] apfmon messages muted
[2025-10-26 01:15:44] 2025-10-25 23:10:00,905 [wrapper] ==== wrapper stdout END ====
[2025-10-26 01:15:44] 2025-10-25 23:10:00,910 [wrapper] ==== wrapper stderr END ====
[2025-10-26 01:15:44]  *** Error codes and diagnostics ***
[2025-10-26 01:15:44]     "exeErrorCode": 0,
[2025-10-26 01:15:44]     "exeErrorDiag": "",
[2025-10-26 01:15:44]     "pilotErrorCode": 0,
[2025-10-26 01:15:44]     "pilotErrorDiag": "",
[2025-10-26 01:15:44]  *** Listing of results directory ***
[2025-10-26 01:15:44] total 432580
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc    557409 Oct 25 09:34 pilot3.tar.gz
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc      5112 Oct 25 09:39 queuedata.json
[2025-10-26 01:15:44] -rwx------ 1 boinc boinc     36292 Oct 25 09:40 runpilot2-wrapper.sh
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc       100 Oct 25 23:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-26 01:15:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 23:52 run_atlas
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc       105 Oct 25 23:52 job.xml
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc      6665 Oct 25 23:52 init_data.xml
[2025-10-26 01:15:44] -rw-r--r-- 2 boinc boinc 228551994 Oct 25 23:52 EVNT.46771634._004851.pool.root.1
[2025-10-26 01:15:44] -rw-r--r-- 2 boinc boinc     15120 Oct 25 23:52 start_atlas.sh
[2025-10-26 01:15:44] drwxrwx--x 2 boinc boinc      4096 Oct 25 23:52 shared
[2025-10-26 01:15:44] -rw-r--r-- 2 boinc boinc    569689 Oct 25 23:52 input.tar.gz
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc         0 Oct 25 23:52 boinc_lockfile
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc      2561 Oct 25 23:52 pandaJob.out
[2025-10-26 01:15:44] -rw------- 1 boinc boinc    978581 Oct 25 23:53 agis_schedconf.cvmfs.json
[2025-10-26 01:15:44] -rw------- 1 boinc boinc   1560772 Oct 25 23:53 agis_ddmendpoints.agis.ALL.json
[2025-10-26 01:15:44] drwx------ 5 boinc boinc      4096 Oct 25 23:53 pilot3
[2025-10-26 01:15:44] -rw------- 1 boinc boinc 208458063 Oct 26 01:08 HITS.46771637._132626.pool.root.1
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc       529 Oct 26 01:08 boinc_task_state.xml
[2025-10-26 01:15:44] -rw------- 1 boinc boinc      1018 Oct 26 01:09 memory_monitor_summary.json
[2025-10-26 01:15:44] -rw------- 1 boinc boinc        95 Oct 26 01:09 pilot_heartbeat.json
[2025-10-26 01:15:44] -rw------- 1 boinc boinc    382913 Oct 26 01:09 log.46771637._132626.job.log.tgz.1
[2025-10-26 01:15:44] -rw------- 1 boinc boinc      7777 Oct 26 01:09 heartbeat.json
[2025-10-26 01:15:44] -rw------- 1 boinc boinc       823 Oct 26 01:10 pilotlog.txt
[2025-10-26 01:15:44] -rw------- 1 boinc boinc    639095 Oct 26 01:10 log.46771637._132626.job.log.1
[2025-10-26 01:15:44] -rw------- 1 boinc boinc       357 Oct 26 01:10 output.list
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc       620 Oct 26 01:10 runtime_log
[2025-10-26 01:15:44] -rw------- 1 boinc boinc   1044480 Oct 26 01:10 result.tar.gz
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc      8764 Oct 26 01:10 runtime_log.err
[2025-10-26 01:15:44] -rw------- 1 boinc boinc       663 Oct 26 01:10 DOpLDmP4nW8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9DnMDmNY7v9n.diag
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc        26 Oct 26 01:15 wrapper_checkpoint.txt
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc      8192 Oct 26 01:15 boinc_mmap_file
[2025-10-26 01:15:44] -rw-r--r-- 1 boinc boinc     22338 Oct 26 01:15 stderr.txt
[2025-10-26 01:15:44] HITS file was successfully produced:
[2025-10-26 01:15:44] -rw------- 1 boinc boinc 208458063 Oct 26 01:08 shared/HITS.pool.root.1
[2025-10-26 01:15:44]  *** Contents of shared directory: ***
[2025-10-26 01:15:44] total 428376
[2025-10-26 01:15:44] -rw-r--r-- 2 boinc boinc 228551994 Oct 25 23:52 ATLAS.root_0
[2025-10-26 01:15:44] -rw-r--r-- 2 boinc boinc     15120 Oct 25 23:52 start_atlas.sh
[2025-10-26 01:15:44] -rw-r--r-- 2 boinc boinc    569689 Oct 25 23:52 input.tar.gz
[2025-10-26 01:15:44] -rw------- 1 boinc boinc 208458063 Oct 26 01:08 HITS.pool.root.1
[2025-10-26 01:15:44] -rw------- 1 boinc boinc   1044480 Oct 26 01:10 result.tar.gz
01:15:46 (2776373): run_atlas exited; CPU time 40801.248011
01:15:46 (2776373): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN