Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:54:05 (3858736): wrapper (7.7.26015): starting
01:54:05 (3858736): wrapper: running run_atlas (--nthreads 4)
[2025-10-26 01:54:05] Arguments: --nthreads 4
[2025-10-26 01:54:05] Threads: 4
[2025-10-26 01:54:05] Checking for CVMFS
[2025-10-26 01:54:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-26 01:54:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-26 01:54:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-26 01:54:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-26 01:54:05] 2.9.2.0 1545554 7232 98484 152134 3 57 31432830 36864001 0 130560 0 5955331 99.990 268060 1059 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-26 01:54:05] CVMFS is ok
[2025-10-26 01:54:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-26 01:54:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-26 01:54:05] Further information can be found at the LHC@home message board.
[2025-10-26 01:54:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-26 01:54:05] Checking for apptainer binary...
[2025-10-26 01:54:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-26 01:54:05] Running /usr/bin/apptainer --version
[2025-10-26 01:54:05] apptainer version 1.4.1-1.1
[2025-10-26 01:54:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-26 01:54:05] thA309
[2025-10-26 01:54:05] apptainer works
[2025-10-26 01:54:05] Set ATHENA_PROC_NUMBER=4
[2025-10-26 01:54:05] Set ATHENA_CORE_NUMBER=4
[2025-10-26 01:54:05] Starting ATLAS job with PandaID=6858343728
[2025-10-26 01:54:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-26 02:15:25]  *** The last 200 lines of the pilot log: ***
[2025-10-26 02:15:25] 2025-10-26 01:14:23,244 | INFO     | all data control threads have been joined
[2025-10-26 02:15:25] 2025-10-26 01:14:23,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-26 02:15:25] 2025-10-26 01:14:23,277 | INFO     | aborting loop
[2025-10-26 02:15:25] 2025-10-26 01:14:23,575 | INFO     | [job] queue monitor thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:23,576 | INFO     | [job] retrieve thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:23,586 | INFO     | [payload] validate_pre thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:23,608 | INFO     | [job] create_data_payload thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:23,657 | INFO     | [job] validate thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:23,780 | INFO     | [payload] failed_post thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:23,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-26 02:15:25] 2025-10-26 01:14:23,840 | INFO     | [payload] control thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:24,176 | INFO     | [data] copytool_in thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:24,244 | INFO     | [job] control thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:24,245 | INFO     | [data] control thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:24,283 | INFO     | [job] job monitor thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:24,360 | INFO     | [payload] validate_post thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:24,450 | INFO     | [payload] execute_payloads thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:25,832 | INFO     | [data] copytool_out thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:26,577 | INFO     | [data] queue_monitor thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:33,050 | INFO     | job.realtimelogging is not enabled
[2025-10-26 02:15:25] 2025-10-26 01:14:34,056 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-26 02:15:25] 2025-10-26 01:14:53,392 | INFO     | PID=3862530 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-26 02:15:25] 2025-10-26 01:14:53,393 | INFO     | found 0 job(s) in 20 queues
[2025-10-26 02:15:25] 2025-10-26 01:14:53,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-26 02:15:25] 2025-10-26 01:14:53,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-26 02:15:25] 2025-10-26 01:15:19,228 | INFO     | [monitor] cgroup control has ended
[2025-10-26 02:15:25] 2025-10-26 01:15:20,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139649913419584)>', '<ExcThread(monitor, started 139648898684672)>']
[2025-10-26 02:15:25] 2025-10-26 01:15:20,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-26 02:15:25] 2025-10-26 01:15:20,531 | INFO     | [monitor] control thread has ended
[2025-10-26 02:15:25] 2025-10-26 01:15:25,359 | INFO     | all workflow threads have been joined
[2025-10-26 02:15:25] 2025-10-26 01:15:25,360 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-26 02:15:25] 2025-10-26 01:15:25,360 | INFO     | traces error code: 0
[2025-10-26 02:15:25] 2025-10-26 01:15:25,360 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-26 02:15:25] 2025-10-26 01:15:25,444 [wrapper] ==== pilot stdout END ====
[2025-10-26 02:15:25] 2025-10-26 01:15:25,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-26 02:15:25] 2025-10-26 01:15:25,453 [wrapper] pilotpid: 3862530
[2025-10-26 02:15:25] 2025-10-26 01:15:25,457 [wrapper] Pilot exit status: 0
[2025-10-26 02:15:25] 2025-10-26 01:15:25,469 [wrapper] pandaids: 6858343728
[2025-10-26 02:15:25] 2025-10-26 01:15:25,494 [wrapper] cleanup supervisor_pilot 3881431 3862531
[2025-10-26 02:15:25] 2025-10-26 01:15:25,497 [wrapper] Test setup, not cleaning
[2025-10-26 02:15:25] 2025-10-26 01:15:25,501 [wrapper] apfmon messages muted
[2025-10-26 02:15:25] 2025-10-26 01:15:25,505 [wrapper] ==== wrapper stdout END ====
[2025-10-26 02:15:25] 2025-10-26 01:15:25,509 [wrapper] ==== wrapper stderr END ====
[2025-10-26 02:15:25]  *** Error codes and diagnostics ***
[2025-10-26 02:15:25]     "exeErrorCode": 0,
[2025-10-26 02:15:25]     "exeErrorDiag": "",
[2025-10-26 02:15:25]     "pilotErrorCode": 0,
[2025-10-26 02:15:25]     "pilotErrorDiag": "",
[2025-10-26 02:15:25]  *** Listing of results directory ***
[2025-10-26 02:15:25] total 432152
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc      5112 Oct 25 09:27 queuedata.json
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc    557409 Oct 25 09:27 pilot3.tar.gz
[2025-10-26 02:15:25] -rwx------ 1 boinc boinc     36292 Oct 25 09:28 runpilot2-wrapper.sh
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc       100 Oct 26 01:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-26 02:15:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 26 01:54 run_atlas
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc       105 Oct 26 01:54 job.xml
[2025-10-26 02:15:25] -rw-r--r-- 2 boinc boinc 229329688 Oct 26 01:54 EVNT.46771634._004673.pool.root.1
[2025-10-26 02:15:25] drwxrwx--x 2 boinc boinc      4096 Oct 26 01:54 shared
[2025-10-26 02:15:25] -rw-r--r-- 2 boinc boinc    569680 Oct 26 01:54 input.tar.gz
[2025-10-26 02:15:25] -rw-r--r-- 2 boinc boinc     15120 Oct 26 01:54 start_atlas.sh
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc         0 Oct 26 01:54 boinc_setup_complete
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc      6377 Oct 26 01:54 init_data.xml
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc         0 Oct 26 01:54 boinc_lockfile
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc      2559 Oct 26 01:54 pandaJob.out
[2025-10-26 02:15:25] -rw------- 1 boinc boinc    978589 Oct 26 01:54 agis_schedconf.cvmfs.json
[2025-10-26 02:15:25] -rw------- 1 boinc boinc   1560772 Oct 26 01:54 agis_ddmendpoints.agis.ALL.json
[2025-10-26 02:15:25] drwx------ 5 boinc boinc      4096 Oct 26 01:54 pilot3
[2025-10-26 02:15:25] -rw------- 1 boinc boinc 207382167 Oct 26 02:13 HITS.46771637._132459.pool.root.1
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc       530 Oct 26 02:13 boinc_task_state.xml
[2025-10-26 02:15:25] -rw------- 1 boinc boinc      1019 Oct 26 02:14 memory_monitor_summary.json
[2025-10-26 02:15:25] -rw------- 1 boinc boinc    251708 Oct 26 02:14 log.46771637._132459.job.log.tgz.1
[2025-10-26 02:15:25] -rw------- 1 boinc boinc      7761 Oct 26 02:14 heartbeat.json
[2025-10-26 02:15:25] -rw------- 1 boinc boinc        95 Oct 26 02:14 pilot_heartbeat.json
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc      8192 Oct 26 02:15 boinc_mmap_file
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc        27 Oct 26 02:15 wrapper_checkpoint.txt
[2025-10-26 02:15:25] -rw------- 1 boinc boinc      4824 Oct 26 02:15 pilotlog.txt
[2025-10-26 02:15:25] -rw------- 1 boinc boinc    708244 Oct 26 02:15 log.46771637._132459.job.log.1
[2025-10-26 02:15:25] -rw------- 1 boinc boinc       357 Oct 26 02:15 output.list
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc       620 Oct 26 02:15 runtime_log
[2025-10-26 02:15:25] -rw------- 1 boinc boinc    983040 Oct 26 02:15 result.tar.gz
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc      8777 Oct 26 02:15 runtime_log.err
[2025-10-26 02:15:25] -rw------- 1 boinc boinc       658 Oct 26 02:15 FU1LDmVsnW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0LEODmLavwYm.diag
[2025-10-26 02:15:25] -rw-r--r-- 1 boinc boinc      6823 Oct 26 02:15 stderr.txt
[2025-10-26 02:15:25] HITS file was successfully produced:
[2025-10-26 02:15:25] -rw------- 1 boinc boinc 207382167 Oct 26 02:13 shared/HITS.pool.root.1
[2025-10-26 02:15:25]  *** Contents of shared directory: ***
[2025-10-26 02:15:25] total 428024
[2025-10-26 02:15:25] -rw-r--r-- 2 boinc boinc 229329688 Oct 26 01:54 ATLAS.root_0
[2025-10-26 02:15:25] -rw-r--r-- 2 boinc boinc    569680 Oct 26 01:54 input.tar.gz
[2025-10-26 02:15:25] -rw-r--r-- 2 boinc boinc     15120 Oct 26 01:54 start_atlas.sh
[2025-10-26 02:15:25] -rw------- 1 boinc boinc 207382167 Oct 26 02:13 HITS.pool.root.1
[2025-10-26 02:15:25] -rw------- 1 boinc boinc    983040 Oct 26 02:15 result.tar.gz
02:15:27 (3858736): run_atlas exited; CPU time 18202.553168
02:15:27 (3858736): called boinc_finish(0)

</stderr_txt>
]]>

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