Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-26 17:27:49 (3276): vboxwrapper version 26210
2025-10-26 17:27:49 (3276): BOINC client version: 7.16.5
2025-10-26 17:27:50 (3276): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-10-26 17:27:50 (3276): Successfully copied 'init_data.xml' to the shared directory.
2025-10-26 17:27:50 (3276): Create VM. (boinc_92866e82431ae5c8, slot#2)
2025-10-26 17:27:51 (3276): Setting Memory Size for VM. (4400MB)
2025-10-26 17:27:51 (3276): Setting CPU Count for VM. (4)
2025-10-26 17:27:51 (3276): Setting Chipset Options for VM.
2025-10-26 17:27:51 (3276): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-26 17:27:52 (3276): Setting Boot Options for VM.
2025-10-26 17:27:52 (3276): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-26 17:27:52 (3276): Enabling VM Network Access.
2025-10-26 17:27:53 (3276): Disabling USB Support for VM.
2025-10-26 17:27:53 (3276): Disabling COM Port Support for VM.
2025-10-26 17:27:53 (3276): Disabling LPT Port Support for VM.
2025-10-26 17:27:53 (3276): Disabling Audio Support for VM.
2025-10-26 17:27:54 (3276): Disabling Clipboard Support for VM.
2025-10-26 17:27:54 (3276): Disabling Drag and Drop Support for VM.
2025-10-26 17:27:54 (3276): Adding storage controller(s) to VM.
2025-10-26 17:27:54 (3276): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-26 17:27:55 (3276): Adding VirtualBox Guest Additions to VM.
2025-10-26 17:27:55 (3276): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-26 17:27:55 (3276): forwarding host port 61615 to guest port 80
2025-10-26 17:27:56 (3276): Enabling remote desktop for VM.
2025-10-26 17:27:56 (3276): Enabling shared directory for VM.
2025-10-26 17:27:57 (3276): Starting VM using VBoxManage interface. (boinc_92866e82431ae5c8, slot#2)
2025-10-26 17:28:01 (3276): Successfully started VM. (PID = '5796')
2025-10-26 17:28:01 (3276): Reporting VM Process ID to BOINC.
2025-10-26 17:28:01 (3276): Guest Log: BIOS: VirtualBox 5.2.44
2025-10-26 17:28:01 (3276): Guest Log: CPUID EDX: 0x178bfbff
2025-10-26 17:28:01 (3276): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-26 17:28:01 (3276): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-26 17:28:01 (3276): Detected: Web Application Enabled (http://localhost:61615)
2025-10-26 17:28:01 (3276): Detected: Remote Desktop Enabled (localhost:61616)
2025-10-26 17:28:01 (3276): Preference change detected
2025-10-26 17:28:01 (3276): Setting CPU throttle for VM. (100%)
2025-10-26 17:28:01 (3276): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-26 17:28:03 (3276): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-26 17:28:03 (3276): Guest Log: BIOS: Booting from Hard Disk...
2025-10-26 17:28:06 (3276): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-26 17:28:06 (3276): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-26 17:28:06 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-26 17:28:09 (3276): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-26 17:28:09 (3276): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-26 17:28:15 (3276): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-26 17:28:15 (3276): Guest Log: 00:00:00.000202 main     Log opened 2025-10-26T17:28:14.137820000Z
2025-10-26 17:28:15 (3276): Guest Log: 00:00:00.000320 main     OS Product: Linux
2025-10-26 17:28:15 (3276): Guest Log: 00:00:00.000351 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-26 17:28:15 (3276): Guest Log: 00:00:00.000378 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-26 17:28:15 (3276): Guest Log: 00:00:00.000411 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-26 17:28:15 (3276): Guest Log: 00:00:00.000412 main     Process ID: 1308
2025-10-26 17:28:15 (3276): Guest Log: 00:00:00.000413 main     Package type: LINUX_64BITS_GENERIC
2025-10-26 17:28:15 (3276): Guest Log: 00:00:00.002254 main     5.2.32 r132073 started. Verbose level = 0
2025-10-26 17:28:15 (3276): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-26 17:28:15 (3276): Guest Log: [INFO] Mounting shared directory
2025-10-26 17:28:15 (3276): Guest Log: [INFO] Checking for init_data.xml
2025-10-26 17:28:25 (3276): Guest Log: 00:00:10.008698 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 043 243 000ns (GuestNow=1 761 492 505 102 016 000 ns GuestLast=1 761 499 694 145 259 000 ns fSetTimeLastLoop=true )
2025-10-26 17:28:43 (3276): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-26 17:28:43 (3276): Guest Log: [INFO] Detected branch: prod
2025-10-26 17:28:43 (3276): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-26 17:28:43 (3276): Guest Log: Copying input files
2025-10-26 17:28:45 (3276): Guest Log: Copied input files into RunAtlas.
2025-10-26 17:28:45 (3276): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-26 17:28:45 (3276): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-26 17:28:45 (3276): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-26 17:28:45 (3276): Guest Log: Further information can be found at the LHC@home message board.
2025-10-26 17:28:55 (3276): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-26 17:28:55 (3276): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-26 17:28:55 (3276): Guest Log: 2.6.3.0 1591 0 30156 152158 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-26 17:28:56 (3276): Guest Log: copied the webapp to /var/www
2025-10-26 17:28:56 (3276): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-26 17:28:56 (3276): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-26 17:28:57 (3276): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-26 17:28:57 (3276): Guest Log:  *** Starting ATLAS job. (PandaID=6858714544 taskID=46964970) ***
2025-10-26 19:08:05 (3276): Status Report: Elapsed Time: '6000.000000'
2025-10-26 19:08:05 (3276): Status Report: CPU Time: '21801.234375'
2025-10-26 20:48:08 (3276): Status Report: Elapsed Time: '12000.000000'
2025-10-26 20:48:08 (3276): Status Report: CPU Time: '45222.640625'
2025-10-26 21:18:05 (3276): Guest Log:  *** Job finished ***
2025-10-26 21:18:05 (3276): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:17:09,445 | INFO     | [data] copytool_out thread has finished
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:17:13,020 | INFO     | [data] queue_monitor thread has finished
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:17:57,342 | INFO     | [monitor] cgroup control has ended
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:17:58,621 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139823093602112)>', '<ExcThread(monitor, started 139822500923136)>']
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:17:59,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:17:59,345 | INFO     | [monitor] control thread has ended
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,626 | INFO     | all workflow threads have been joined
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,626 | INFO     | end of generic workflow (traces error code: 0)
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,627 | INFO     | traces error code: 0
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,740 [wrapper] ==== pilot stdout END ====
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,746 [wrapper] ==== wrapper stdout RESUME ====
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,752 [wrapper] pilotpid: 5989
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,757 [wrapper] Pilot exit status: 0
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,827 [wrapper] pandaids: 6858714544
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,872 [wrapper] cleanup supervisor_pilot 12635 5990
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,877 [wrapper] Test setup, not cleaning
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,883 [wrapper] apfmon messages muted
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,888 [wrapper] ==== wrapper stdout END ====
2025-10-26 21:18:05 (3276): Guest Log: 2025-10-26 19:18:03,894 [wrapper] ==== wrapper stderr END ====
2025-10-26 21:18:05 (3276): Guest Log:  *** Error codes and diagnostics ***
2025-10-26 21:18:05 (3276): Guest Log:     "exeErrorCode": 0,
2025-10-26 21:18:05 (3276): Guest Log:     "exeErrorDiag": "",
2025-10-26 21:18:05 (3276): Guest Log:     "pilotErrorCode": 0,
2025-10-26 21:18:05 (3276): Guest Log:     "pilotErrorDiag": "",
2025-10-26 21:18:05 (3276): Guest Log:  *** Listing of results directory ***
2025-10-26 21:18:05 (3276): Guest Log: total 193848
2025-10-26 21:18:05 (3276): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 25 04:39 queuedata.json
2025-10-26 21:18:05 (3276): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 25 04:39 pilot3.tar.gz
2025-10-26 21:18:05 (3276): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 25 04:40 runpilot2-wrapper.sh
2025-10-26 21:18:05 (3276): Guest Log: -rwxr-xr-x. 1 atlas atlas      8877 Oct 26 15:28 init_data.xml
2025-10-26 21:18:05 (3276): Guest Log: -rwxr-xr-x. 1 atlas atlas    569691 Oct 26 15:28 input.tar.gz
2025-10-26 21:18:05 (3276): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 26 15:28 start_atlas.sh
2025-10-26 21:18:05 (3276): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 26 15:28 EVNT.46964963._000043.pool.root.1 -> /data/./ATLAS.root_0
2025-10-26 21:18:05 (3276): Guest Log: -rw-r--r--. 1 atlas atlas      2589 Oct 26 15:28 pandaJob.out
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas    978581 Oct 26 15:29 agis_schedconf.cvmfs.json
2025-10-26 21:18:05 (3276): Guest Log: drwx------. 5 atlas atlas      4096 Oct 26 15:29 pilot3
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas 190251507 Oct 26 19:16 HITS.46964970._001087.pool.root.1
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas        95 Oct 26 19:16 pilot_heartbeat.json
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas      1032 Oct 26 19:16 memory_monitor_summary.json
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas   1560772 Oct 26 19:16 agis_ddmendpoints.agis.ALL.json
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas    387743 Oct 26 19:16 log.46964970._001087.job.log.tgz.1
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas      7817 Oct 26 19:17 heartbeat.json
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 26 19:18 pilotlog.txt
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas   1819162 Oct 26 19:18 log.46964970._001087.job.log.1
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas       357 Oct 26 19:18 output.list
2025-10-26 21:18:05 (3276): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 26 19:18 runtime_log
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas   2222080 Oct 26 19:18 result.tar.gz
2025-10-26 21:18:05 (3276): Guest Log: -rw-r--r--. 1 atlas atlas      8679 Oct 26 19:18 runtime_log.err
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas       671 Oct 26 19:18 OZtNDmXFlW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbymMDmLOQeXo.diag
2025-10-26 21:18:05 (3276): Guest Log: Looking for outputfile HITS.46964970._001087.pool.root.1
2025-10-26 21:18:05 (3276): Guest Log: HITS file was successfully produced
2025-10-26 21:18:05 (3276): Guest Log: -rw-------. 1 atlas atlas 190251507 Oct 26 19:16 /home/atlas/RunAtlas/HITS.46964970._001087.pool.root.1
2025-10-26 21:18:07 (3276): Guest Log: Successfully finished the ATLAS job!
2025-10-26 21:18:07 (3276): Guest Log: Copying the results back to the shared directory!
2025-10-26 21:18:07 (3276): Guest Log:  *** Contents of shared directory: ***
2025-10-26 21:18:07 (3276): Guest Log: total 458204
2025-10-26 21:18:07 (3276): Guest Log: -rwxrwxrwx. 1 root root 276117504 Oct 26 15:27 ATLAS.root_0
2025-10-26 21:18:07 (3276): Guest Log: -rwxrwxrwx. 1 root root 190251507 Oct 26 19:18 HITS.pool.root.1
2025-10-26 21:18:07 (3276): Guest Log: -rwxrwxrwx. 1 root root      8877 Oct 26 15:27 init_data.xml
2025-10-26 21:18:07 (3276): Guest Log: -rwxrwxrwx. 1 root root    569691 Oct 25 13:00 input.tar.gz
2025-10-26 21:18:07 (3276): Guest Log: -rwxrwxrwx. 1 root root   2222080 Oct 26 19:18 result.tar.gz
2025-10-26 21:18:07 (3276): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 25 13:00 start_atlas.sh
2025-10-26 21:18:07 (3276): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-26 21:18:07 (3276): VM Completion File Detected.
2025-10-26 21:18:07 (3276): Powering off VM.
2025-10-26 21:18:08 (3276): Successfully stopped VM.
2025-10-26 21:18:08 (3276): Deregistering VM. (boinc_92866e82431ae5c8, slot#2)
2025-10-26 21:18:08 (3276): Removing network bandwidth throttle group from VM.
2025-10-26 21:18:08 (3276): Removing VM from VirtualBox.
2025-10-26 21:18:14 (3276): called boinc_finish(0)

</stderr_txt>
]]>

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