Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:21:19 (2664195): wrapper (7.7.26015): starting
23:21:19 (2664195): wrapper: running run_atlas (--nthreads 12)
[2025-10-25 23:21:19] Arguments: --nthreads 12
[2025-10-25 23:21:19] Threads: 12
[2025-10-25 23:21:19] Checking for CVMFS
[2025-10-25 23:21:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 23:21:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 23:21:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 23:21:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 23:21:21] 2.13.2.0 1918225 17551 192924 152131 0 85 30672167 46080001 50367 130560 0 113766229 99.959 13807765 23583 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-25 23:21:21] CVMFS is ok
[2025-10-25 23:21:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 23:21:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 23:21:21] Further information can be found at the LHC@home message board.
[2025-10-25 23:21:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 23:21:21] Checking for apptainer binary...
[2025-10-25 23:21:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 23:21:21] Running /usr/bin/apptainer --version
[2025-10-25 23:21:21] apptainer version 1.4.2-1.el9
[2025-10-25 23:21:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 23:23:04] mff2104.farm.particle.cz
[2025-10-25 23:23:04] apptainer works
[2025-10-25 23:23:04] Set ATHENA_PROC_NUMBER=12
[2025-10-25 23:23:04] Set ATHENA_CORE_NUMBER=12
[2025-10-25 23:23:04] Starting ATLAS job with PandaID=6858053233
[2025-10-25 23:23:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-26 01:02:03]  *** The last 200 lines of the pilot log: ***
[2025-10-26 01:02:03] 2025-10-25 22:56:24,452 | INFO     | monitor loop #394: job 0:6858053233 is in state 'finished'
[2025-10-26 01:02:03] 2025-10-25 22:56:24,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:03] 2025-10-25 22:56:24,689 | INFO     | time since job start (5511s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:26,698 | INFO     | time since job start (5513s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:26,958 | INFO     | monitor loop #395: job 0:6858053233 is in state 'finished'
[2025-10-26 01:02:03] 2025-10-25 22:56:26,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:03] 2025-10-25 22:56:28,623 | INFO     | PID=2681719 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-26 01:02:03] 2025-10-25 22:56:28,623 | INFO     | .. there are 82 such processes running
[2025-10-26 01:02:03] 2025-10-25 22:56:29,484 | INFO     | monitor loop #396: job 0:6858053233 is in state 'finished'
[2025-10-26 01:02:03] 2025-10-25 22:56:29,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:03] 2025-10-25 22:56:29,624 | INFO     | time since job start (5516s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:31,630 | INFO     | time since job start (5518s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:31,990 | INFO     | monitor loop #397: job 0:6858053233 is in state 'finished'
[2025-10-26 01:02:03] 2025-10-25 22:56:31,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:03] 2025-10-25 22:56:33,639 | INFO     | time since job start (5520s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:34,495 | INFO     | monitor loop #398: job 0:6858053233 is in state 'finished'
[2025-10-26 01:02:03] 2025-10-25 22:56:34,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:03] 2025-10-25 22:56:35,649 | INFO     | time since job start (5522s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:37,000 | INFO     | monitor loop #399: job 0:6858053233 is in state 'finished'
[2025-10-26 01:02:03] 2025-10-25 22:56:37,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:03] 2025-10-25 22:56:37,656 | INFO     | time since job start (5524s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:39,505 | INFO     | monitor loop #400: job 0:6858053233 is in state 'finished'
[2025-10-26 01:02:03] 2025-10-25 22:56:39,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:03] 2025-10-25 22:56:39,664 | INFO     | time since job start (5526s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:41,673 | INFO     | time since job start (5528s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:41,674 | INFO     | 5534s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-26 01:02:03] 2025-10-25 22:56:42,010 | INFO     | monitor loop #401: job 0:6858053233 is in state 'finished'
[2025-10-26 01:02:03] 2025-10-25 22:56:42,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:03] 2025-10-25 22:56:43,680 | INFO     | time since job start (5530s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:44,516 | INFO     | monitor loop #402: job 0:6858053233 is in state 'finished'
[2025-10-26 01:02:03] 2025-10-25 22:56:44,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:03] 2025-10-25 22:56:45,687 | INFO     | time since job start (5532s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:47,024 | INFO     | monitor loop #403: job 0:6858053233 is in state 'finished'
[2025-10-26 01:02:03] 2025-10-25 22:56:47,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:03] 2025-10-25 22:56:47,527 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-26 01:02:03] 2025-10-25 22:56:47,558 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2837.200968750001
[2025-10-26 01:02:03] 2025-10-25 22:56:47,579 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6858053233/memory_monitor_summary.json (trf name=prmon)
[2025-10-26 01:02:03] 2025-10-25 22:56:47,584 | INFO     | extracted standard info from prmon json
[2025-10-26 01:02:03] 2025-10-25 22:56:47,588 | INFO     | extracted standard memory fields from prmon json
[2025-10-26 01:02:03] 2025-10-25 22:56:47,588 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-26 01:02:03] 2025-10-25 22:56:47,589 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-26 01:02:03] 2025-10-25 22:56:47,589 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-26 01:02:03] 2025-10-25 22:56:47,591 | INFO     | fitting pss+swap vs Time
[2025-10-26 01:02:03] 2025-10-25 22:56:47,591 | INFO     | sum of square deviations: 158737860.0
[2025-10-26 01:02:03] 2025-10-25 22:56:47,591 | INFO     | sum of deviations: 4940381520.999999
[2025-10-26 01:02:03] 2025-10-25 22:56:47,591 | INFO     | mean x: 1761430387.5
[2025-10-26 01:02:03] 2025-10-25 22:56:47,591 | INFO     | mean y: 2684356.85
[2025-10-26 01:02:03] 2025-10-25 22:56:47,591 | INFO     | -- intersect: -54818126109.74485
[2025-10-26 01:02:03] 2025-10-25 22:56:47,591 | INFO     | intersect: -54818126109.74485
[2025-10-26 01:02:03] 2025-10-25 22:56:47,592 | INFO     | chi2: 0.6342021144085799
[2025-10-26 01:02:03] 2025-10-25 22:56:47,592 | INFO     | -- intersect: -54818126109.74485
[2025-10-26 01:02:03] 2025-10-25 22:56:47,592 | INFO     | current memory leak: 31.12 B/s (using 80 data points, chi2=0.63)
[2025-10-26 01:02:03] 2025-10-25 22:56:47,592 | INFO     | could have reported an average CPU frequency of 2804 MHz (6 samples)
[2025-10-26 01:02:03] 2025-10-25 22:56:47,592 | INFO     | ..............................
[2025-10-26 01:02:03] 2025-10-25 22:56:47,592 | INFO     | . Timing measurements:
[2025-10-26 01:02:03] 2025-10-25 22:56:47,592 | INFO     | . get job = 0 s
[2025-10-26 01:02:03] 2025-10-25 22:56:47,592 | INFO     | . initial setup = 5 s
[2025-10-26 01:02:03] 2025-10-25 22:56:47,593 | INFO     | . payload setup = 62 s
[2025-10-26 01:02:03] 2025-10-25 22:56:47,593 | INFO     | . stage-in = 0 s
[2025-10-26 01:02:03] 2025-10-25 22:56:47,593 | INFO     | . payload execution = 5333 s
[2025-10-26 01:02:03] 2025-10-25 22:56:47,593 | INFO     | . stage-out = 1 s
[2025-10-26 01:02:03] 2025-10-25 22:56:47,593 | INFO     | . log creation = 0 s
[2025-10-26 01:02:03] 2025-10-25 22:56:47,593 | INFO     | ..............................
[2025-10-26 01:02:03] 2025-10-25 22:56:47,693 | INFO     | 
[2025-10-26 01:02:03] 2025-10-25 22:56:47,693 | INFO     | job summary report
[2025-10-26 01:02:03] 2025-10-25 22:56:47,693 | INFO     | --------------------------------------------------
[2025-10-26 01:02:03] 2025-10-25 22:56:47,693 | INFO     | PanDA job id: 6858053233
[2025-10-26 01:02:03] 2025-10-25 22:56:47,693 | INFO     | task id: 46771637
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | errors: (none)
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | pilot state: finished 
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | transexitcode: 0
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | exeerrorcode: 0
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | exeerrordiag: 
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | exitcode: 0
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | exitmsg: OK
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | cpuconsumptiontime: 42377 s
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | nevents: 400
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | neventsw: 0
[2025-10-26 01:02:03] 2025-10-25 22:56:47,694 | INFO     | pid: 2709342
[2025-10-26 01:02:03] 2025-10-25 22:56:47,695 | INFO     | pgrp: 2709342
[2025-10-26 01:02:03] 2025-10-25 22:56:47,695 | INFO     | corecount: 12
[2025-10-26 01:02:03] 2025-10-25 22:56:47,695 | INFO     | event service: False
[2025-10-26 01:02:03] 2025-10-25 22:56:47,695 | INFO     | sizes: {0: 2348715, 1: 2348914, 12: 2348914, 23: 2348942, 34: 2348970, 43: 2349260, 45: 2349416, 5399: 2376018, 5400: 2385018, 5401: 2385074, 5445: 2385268}
[2025-10-26 01:02:03] 2025-10-25 22:56:47,695 | INFO     | --------------------------------------------------
[2025-10-26 01:02:03] 2025-10-25 22:56:47,695 | INFO     | 
[2025-10-26 01:02:03] 2025-10-25 22:56:47,695 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2025-10-26 01:02:03] 2025-10-25 22:56:47,703 | INFO     | time since job start (5534s) is within the limit (172800.0s)
[2025-10-26 01:02:03] 2025-10-25 22:56:47,934 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,934 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,934 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,934 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-26 01:02:03] 2025-10-25 22:56:47,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-26 01:02:03] 2025-10-25 22:56:47,936 | INFO     | job 6858053233 has completed (purged errors)
[2025-10-26 01:02:03] 2025-10-25 22:56:47,936 | INFO     | overall cleanup function is called
[2025-10-26 01:02:03] 2025-10-25 22:56:48,950 | INFO     | --- collectZombieJob: --- 10, [2709342]
[2025-10-26 01:02:03] 2025-10-25 22:56:48,950 | INFO     | zombie collector waiting for pid 2709342
[2025-10-26 01:02:03] 2025-10-25 22:56:48,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-26 01:02:03] 2025-10-25 22:56:48,951 | INFO     | collected zombie processes
[2025-10-26 01:02:03] 2025-10-25 22:56:48,951 | INFO     | will attempt to kill all subprocesses of pid=2709342
[2025-10-26 01:02:03] 2025-10-25 22:56:49,728 | INFO     | process IDs to be killed: [2709342] (in reverse order)
[2025-10-26 01:02:03] 2025-10-25 22:56:50,192 | WARNING  | found no corresponding commands to process id(s)
[2025-10-26 01:02:03] 2025-10-25 22:56:50,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-26 01:02:03] 2025-10-25 22:56:50,220 | INFO     | did not find any defunct processes belonging to 2709342
[2025-10-26 01:02:03] 2025-10-25 22:56:50,253 | INFO     | did not find any defunct processes belonging to 2709342
[2025-10-26 01:02:03] 2025-10-25 22:56:50,254 | INFO     | ready for new job
[2025-10-26 01:02:03] 2025-10-25 22:56:50,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-26 01:02:03] 2025-10-25 22:56:50,256 | INFO     | ***************************************
[2025-10-26 01:02:03] 2025-10-25 22:56:50,256 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-26 01:02:03] 2025-10-25 22:56:50,256 | INFO     | ***************************************
[2025-10-26 01:02:03] 2025-10-25 22:56:50,256 | INFO     | 
[2025-10-26 01:02:03] 2025-10-25 22:56:50,262 | INFO     | architecture information:
[2025-10-26 01:02:03] 2025-10-25 22:56:50,263 | INFO     | executing command: cat /etc/os-release
[2025-10-26 01:02:03] 2025-10-25 22:56:50,408 | INFO     | cat /etc/os-release:
[2025-10-26 01:02:03] NAME="CentOS Linux"
[2025-10-26 01:02:03] VERSION="7 (Core)"
[2025-10-26 01:02:03] ID="centos"
[2025-10-26 01:02:03] ID_LIKE="rhel fedora"
[2025-10-26 01:02:03] VERSION_ID="7"
[2025-10-26 01:02:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-26 01:02:03] ANSI_COLOR="0;31"
[2025-10-26 01:02:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-26 01:02:03] HOME_URL="https://www.centos.org/"
[2025-10-26 01:02:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-26 01:02:03] 
[2025-10-26 01:02:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-26 01:02:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-26 01:02:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-26 01:02:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-26 01:02:03] 
[2025-10-26 01:02:03] 2025-10-25 22:56:50,409 | INFO     | ***************************************
[2025-10-26 01:02:03] 2025-10-25 22:56:50,912 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2025-10-26 01:02:03] 2025-10-25 22:56:51,023 | INFO     | sufficient remaining disk space (1677755154432 B)
[2025-10-26 01:02:03] 2025-10-25 22:56:51,023 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-26 01:02:03] 2025-10-25 22:56:51,023 | INFO     | current server update state: UPDATING_FINAL
[2025-10-26 01:02:03] 2025-10-25 22:56:51,024 | INFO     | update_server=False
[2025-10-26 01:02:03] 2025-10-25 22:56:51,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-26 01:02:03] 2025-10-25 22:56:51,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-26 01:02:03] 2025-10-25 22:56:51,025 | INFO     | aborting loop
[2025-10-26 01:02:03] 2025-10-25 22:56:51,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-26 01:02:03] 2025-10-25 22:56:51,632 | INFO     | all payload control threads have been joined
[2025-10-26 01:02:03] 2025-10-25 22:56:51,675 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-26 01:02:03] 2025-10-25 22:56:52,028 | INFO     | [job] retrieve thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:52,030 | INFO     | [job] job monitor thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:52,122 | INFO     | all data control threads have been joined
[2025-10-26 01:02:03] 2025-10-25 22:56:52,245 | INFO     | all job control threads have been joined
[2025-10-26 01:02:03] 2025-10-25 22:56:52,499 | INFO     | [payload] execute_payloads thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:52,638 | INFO     | [payload] control thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:52,705 | INFO     | [payload] validate_post thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:52,707 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-26 01:02:03] 2025-10-25 22:56:53,063 | INFO     | [payload] validate_pre thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:53,128 | INFO     | [data] control thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:53,173 | INFO     | [payload] failed_post thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:53,251 | INFO     | [job] control thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:53,265 | INFO     | [data] copytool_in thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:53,407 | INFO     | [job] validate thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:53,508 | INFO     | [job] create_data_payload thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:53,682 | INFO     | [data] copytool_out thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:53,713 | INFO     | [job] queue monitor thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:56:55,043 | INFO     | [data] queue_monitor thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:57:01,250 | INFO     | job.realtimelogging is not enabled
[2025-10-26 01:02:03] 2025-10-25 22:57:02,256 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-26 01:02:03] 2025-10-25 22:57:21,685 | INFO     | PID=2681719 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-26 01:02:03] 2025-10-25 22:57:21,685 | INFO     | .. there are 81 such processes running
[2025-10-26 01:02:03] 2025-10-25 22:57:21,686 | INFO     | found 0 job(s) in 20 queues
[2025-10-26 01:02:03] 2025-10-25 22:57:21,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-26 01:02:03] 2025-10-25 22:57:21,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-26 01:02:03] 2025-10-25 22:57:42,006 | INFO     | [monitor] cgroup control has ended
[2025-10-26 01:02:03] 2025-10-25 22:57:42,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369748911936)>', '<ExcThread(monitor, started 140369102620416)>']
[2025-10-26 01:02:03] 2025-10-25 22:57:42,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-26 01:02:03] 2025-10-25 22:57:42,812 | INFO     | [monitor] control thread has ended
[2025-10-26 01:02:03] 2025-10-25 22:57:47,692 | INFO     | all workflow threads have been joined
[2025-10-26 01:02:03] 2025-10-25 22:57:47,693 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-26 01:02:03] 2025-10-25 22:57:47,693 | INFO     | traces error code: 0
[2025-10-26 01:02:03] 2025-10-25 22:57:47,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-26 01:02:03] 2025-10-25 22:57:47,977 [wrapper] ==== pilot stdout END ====
[2025-10-26 01:02:03] 2025-10-25 22:57:48,021 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-26 01:02:03] 2025-10-25 22:57:48,060 [wrapper] pilotpid: 2681719
[2025-10-26 01:02:03] 2025-10-25 22:57:48,085 [wrapper] Pilot exit status: 0
[2025-10-26 01:02:03] 2025-10-25 22:57:48,247 [wrapper] pandaids: 6858053233
[2025-10-26 01:02:03] 2025-10-25 22:57:48,863 [wrapper] cleanup supervisor_pilot 2970635 2681720
[2025-10-26 01:02:03] 2025-10-25 22:57:48,895 [wrapper] Test setup, not cleaning
[2025-10-26 01:02:03] 2025-10-25 22:57:48,936 [wrapper] apfmon messages muted
[2025-10-26 01:02:03] 2025-10-25 22:57:48,965 [wrapper] ==== wrapper stdout END ====
[2025-10-26 01:02:03] 2025-10-25 22:57:48,969 [wrapper] ==== wrapper stderr END ====
[2025-10-26 01:02:03]  *** Error codes and diagnostics ***
[2025-10-26 01:02:03]     "exeErrorCode": 0,
[2025-10-26 01:02:03]     "exeErrorDiag": "",
[2025-10-26 01:02:03]     "pilotErrorCode": 0,
[2025-10-26 01:02:03]     "pilotErrorDiag": "",
[2025-10-26 01:02:03]  *** Listing of results directory ***
[2025-10-26 01:02:03] total 431872
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc    557409 Oct 25 08:33 pilot3.tar.gz
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc      5112 Oct 25 09:05 queuedata.json
[2025-10-26 01:02:03] -rwx------ 1 boinc boinc     36292 Oct 25 09:05 runpilot2-wrapper.sh
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc       100 Oct 25 23:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-26 01:02:03] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 23:21 run_atlas
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc       105 Oct 25 23:21 job.xml
[2025-10-26 01:02:03] -rw-r--r-- 2 boinc boinc 227448391 Oct 25 23:21 EVNT.46771634._004601.pool.root.1
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc      6665 Oct 25 23:21 init_data.xml
[2025-10-26 01:02:03] -rw-r--r-- 2 boinc boinc     15120 Oct 25 23:21 start_atlas.sh
[2025-10-26 01:02:03] drwxrwx--x 2 boinc boinc      4096 Oct 25 23:21 shared
[2025-10-26 01:02:03] -rw-r--r-- 2 boinc boinc    569693 Oct 25 23:21 input.tar.gz
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc         0 Oct 25 23:21 boinc_lockfile
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc      2562 Oct 25 23:23 pandaJob.out
[2025-10-26 01:02:03] -rw------- 1 boinc boinc    978581 Oct 25 23:24 agis_schedconf.cvmfs.json
[2025-10-26 01:02:03] -rw------- 1 boinc boinc   1560772 Oct 25 23:24 agis_ddmendpoints.agis.ALL.json
[2025-10-26 01:02:03] drwx------ 5 boinc boinc      4096 Oct 25 23:24 pilot3
[2025-10-26 01:02:03] -rw------- 1 boinc boinc 208589335 Oct 26 00:55 HITS.46771637._132270.pool.root.1
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc       529 Oct 26 00:55 boinc_task_state.xml
[2025-10-26 01:02:03] -rw------- 1 boinc boinc      1019 Oct 26 00:55 memory_monitor_summary.json
[2025-10-26 01:02:03] -rw------- 1 boinc boinc    384224 Oct 26 00:56 log.46771637._132270.job.log.tgz.1
[2025-10-26 01:02:03] -rw------- 1 boinc boinc      7782 Oct 26 00:56 heartbeat.json
[2025-10-26 01:02:03] -rw------- 1 boinc boinc        95 Oct 26 00:57 pilot_heartbeat.json
[2025-10-26 01:02:03] -rw------- 1 boinc boinc      4899 Oct 26 00:57 pilotlog.txt
[2025-10-26 01:02:03] -rw------- 1 boinc boinc    761658 Oct 26 00:57 log.46771637._132270.job.log.1
[2025-10-26 01:02:03] -rw------- 1 boinc boinc       357 Oct 26 00:57 output.list
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc       620 Oct 26 00:57 runtime_log
[2025-10-26 01:02:03] -rw------- 1 boinc boinc   1167360 Oct 26 00:57 result.tar.gz
[2025-10-26 01:02:03] -rw------- 1 boinc boinc       663 Oct 26 00:57 WBKKDmUWnW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmyBnMDmjK5iNn.diag
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc      8764 Oct 26 00:57 runtime_log.err
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc        26 Oct 26 01:02 wrapper_checkpoint.txt
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc      8192 Oct 26 01:02 boinc_mmap_file
[2025-10-26 01:02:03] -rw-r--r-- 1 boinc boinc     22351 Oct 26 01:02 stderr.txt
[2025-10-26 01:02:03] HITS file was successfully produced:
[2025-10-26 01:02:03] -rw------- 1 boinc boinc 208589335 Oct 26 00:55 shared/HITS.pool.root.1
[2025-10-26 01:02:03]  *** Contents of shared directory: ***
[2025-10-26 01:02:03] total 427548
[2025-10-26 01:02:03] -rw-r--r-- 2 boinc boinc 227448391 Oct 25 23:21 ATLAS.root_0
[2025-10-26 01:02:03] -rw-r--r-- 2 boinc boinc     15120 Oct 25 23:21 start_atlas.sh
[2025-10-26 01:02:03] -rw-r--r-- 2 boinc boinc    569693 Oct 25 23:21 input.tar.gz
[2025-10-26 01:02:03] -rw------- 1 boinc boinc 208589335 Oct 26 00:55 HITS.pool.root.1
[2025-10-26 01:02:03] -rw------- 1 boinc boinc   1167360 Oct 26 00:57 result.tar.gz
01:02:05 (2664195): run_atlas exited; CPU time 42650.053608
01:02:05 (2664195): called boinc_finish(0)

</stderr_txt>
]]>

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