Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:18:01 (2465792): wrapper (7.7.26015): starting
22:18:01 (2465792): wrapper: running run_atlas (--nthreads 12)
[2025-10-25 22:18:01] Arguments: --nthreads 12
[2025-10-25 22:18:01] Threads: 12
[2025-10-25 22:18:01] Checking for CVMFS
[2025-10-25 22:18:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 22:18:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 22:18:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 22:18:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 22:18:04] 2.13.2.0 1918225 17487 198188 152129 3 166 30642979 46080001 50145 130560 0 113490567 99.959 13788289 23573 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-25 22:18:04] CVMFS is ok
[2025-10-25 22:18:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 22:18:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 22:18:04] Further information can be found at the LHC@home message board.
[2025-10-25 22:18:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 22:18:04] Checking for apptainer binary...
[2025-10-25 22:18:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 22:18:04] Running /usr/bin/apptainer --version
[2025-10-25 22:18:04] apptainer version 1.4.2-1.el9
[2025-10-25 22:18:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 22:18:04] mff2104.farm.particle.cz
[2025-10-25 22:18:04] apptainer works
[2025-10-25 22:18:04] Set ATHENA_PROC_NUMBER=12
[2025-10-25 22:18:04] Set ATHENA_CORE_NUMBER=12
[2025-10-25 22:18:05] Starting ATLAS job with PandaID=6857015490
[2025-10-25 22:18:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-26 00:02:48]  *** The last 200 lines of the pilot log: ***
[2025-10-26 00:02:48] 2025-10-25 22:01:04,028 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-26 00:02:48] 2025-10-25 22:01:05,490 | INFO     | monitor loop #412: job 0:6857015490 is in state 'finished'
[2025-10-26 00:02:48] 2025-10-25 22:01:05,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 00:02:48] 2025-10-25 22:01:05,929 | INFO     | time since job start (6089s) is within the limit (172800.0s)
[2025-10-26 00:02:48] 2025-10-25 22:01:07,935 | INFO     | time since job start (6091s) is within the limit (172800.0s)
[2025-10-26 00:02:48] 2025-10-25 22:01:07,997 | INFO     | monitor loop #413: job 0:6857015490 is in state 'finished'
[2025-10-26 00:02:48] 2025-10-25 22:01:07,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 00:02:48] 2025-10-25 22:01:10,096 | INFO     | PID=2480237 has CPU usage=20.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-26 00:02:48] 2025-10-25 22:01:10,097 | INFO     | .. there are 84 such processes running
[2025-10-26 00:02:48] 2025-10-25 22:01:10,504 | INFO     | monitor loop #414: job 0:6857015490 is in state 'finished'
[2025-10-26 00:02:48] 2025-10-25 22:01:10,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 00:02:48] 2025-10-25 22:01:11,097 | INFO     | time since job start (6095s) is within the limit (172800.0s)
[2025-10-26 00:02:48] 2025-10-25 22:01:13,011 | INFO     | monitor loop #415: job 0:6857015490 is in state 'finished'
[2025-10-26 00:02:48] 2025-10-25 22:01:13,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 00:02:48] 2025-10-25 22:01:13,108 | INFO     | time since job start (6097s) is within the limit (172800.0s)
[2025-10-26 00:02:48] 2025-10-25 22:01:15,118 | INFO     | time since job start (6099s) is within the limit (172800.0s)
[2025-10-26 00:02:48] 2025-10-25 22:01:15,516 | INFO     | monitor loop #416: job 0:6857015490 is in state 'finished'
[2025-10-26 00:02:48] 2025-10-25 22:01:15,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 00:02:48] 2025-10-25 22:01:17,124 | INFO     | time since job start (6101s) is within the limit (172800.0s)
[2025-10-26 00:02:48] 2025-10-25 22:01:18,021 | INFO     | monitor loop #417: job 0:6857015490 is in state 'finished'
[2025-10-26 00:02:48] 2025-10-25 22:01:18,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 00:02:48] 2025-10-25 22:01:19,131 | INFO     | time since job start (6103s) is within the limit (172800.0s)
[2025-10-26 00:02:48] 2025-10-25 22:01:19,132 | INFO     | 6109s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-26 00:02:48] 2025-10-25 22:01:20,525 | INFO     | monitor loop #418: job 0:6857015490 is in state 'finished'
[2025-10-26 00:02:48] 2025-10-25 22:01:20,526 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 00:02:48] 2025-10-25 22:01:21,141 | INFO     | time since job start (6105s) is within the limit (172800.0s)
[2025-10-26 00:02:48] 2025-10-25 22:01:23,030 | INFO     | monitor loop #419: job 0:6857015490 is in state 'finished'
[2025-10-26 00:02:48] 2025-10-25 22:01:23,030 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 00:02:48] 2025-10-25 22:01:23,148 | INFO     | time since job start (6107s) is within the limit (172800.0s)
[2025-10-26 00:02:48] 2025-10-25 22:01:25,155 | INFO     | time since job start (6109s) is within the limit (172800.0s)
[2025-10-26 00:02:48] 2025-10-25 22:01:25,534 | INFO     | monitor loop #420: job 0:6857015490 is in state 'finished'
[2025-10-26 00:02:48] 2025-10-25 22:01:25,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 00:02:48] 2025-10-25 22:01:27,162 | INFO     | time since job start (6111s) is within the limit (172800.0s)
[2025-10-26 00:02:48] 2025-10-25 22:01:28,039 | INFO     | monitor loop #421: job 0:6857015490 is in state 'finished'
[2025-10-26 00:02:48] 2025-10-25 22:01:28,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 00:02:48] 2025-10-25 22:01:28,571 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-26 00:02:48] 2025-10-25 22:01:28,593 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2854.207437500001
[2025-10-26 00:02:48] 2025-10-25 22:01:28,613 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6857015490/memory_monitor_summary.json (trf name=prmon)
[2025-10-26 00:02:48] 2025-10-25 22:01:28,614 | INFO     | extracted standard info from prmon json
[2025-10-26 00:02:48] 2025-10-25 22:01:28,614 | INFO     | extracted standard memory fields from prmon json
[2025-10-26 00:02:48] 2025-10-25 22:01:28,614 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-26 00:02:48] 2025-10-25 22:01:28,615 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-26 00:02:48] 2025-10-25 22:01:28,615 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-26 00:02:48] 2025-10-25 22:01:28,617 | INFO     | fitting pss+swap vs Time
[2025-10-26 00:02:48] 2025-10-25 22:01:28,617 | INFO     | sum of square deviations: 226022842.5
[2025-10-26 00:02:48] 2025-10-25 22:01:28,619 | INFO     | sum of deviations: 1795931866.000001
[2025-10-26 00:02:48] 2025-10-25 22:01:28,619 | INFO     | mean x: 1761426792.5
[2025-10-26 00:02:48] 2025-10-25 22:01:28,619 | INFO     | mean y: 2753095.8444444444
[2025-10-26 00:02:48] 2025-10-25 22:01:28,619 | INFO     | -- intersect: -13993188514.68955
[2025-10-26 00:02:48] 2025-10-25 22:01:28,620 | INFO     | intersect: -13993188514.68955
[2025-10-26 00:02:48] 2025-10-25 22:01:28,620 | INFO     | chi2: 1.195227051607285
[2025-10-26 00:02:48] 2025-10-25 22:01:28,620 | INFO     | -- intersect: -13993188514.68955
[2025-10-26 00:02:48] 2025-10-25 22:01:28,620 | INFO     | current memory leak: 7.95 B/s (using 90 data points, chi2=1.20)
[2025-10-26 00:02:48] 2025-10-25 22:01:28,620 | INFO     | could have reported an average CPU frequency of 2795 MHz (7 samples)
[2025-10-26 00:02:48] 2025-10-25 22:01:28,620 | INFO     | ..............................
[2025-10-26 00:02:48] 2025-10-25 22:01:28,621 | INFO     | . Timing measurements:
[2025-10-26 00:02:48] 2025-10-25 22:01:28,621 | INFO     | . get job = 0 s
[2025-10-26 00:02:48] 2025-10-25 22:01:28,621 | INFO     | . initial setup = 5 s
[2025-10-26 00:02:48] 2025-10-25 22:01:28,621 | INFO     | . payload setup = 52 s
[2025-10-26 00:02:48] 2025-10-25 22:01:28,621 | INFO     | . stage-in = 0 s
[2025-10-26 00:02:48] 2025-10-25 22:01:28,621 | INFO     | . payload execution = 5923 s
[2025-10-26 00:02:48] 2025-10-25 22:01:28,621 | INFO     | . stage-out = 1 s
[2025-10-26 00:02:48] 2025-10-25 22:01:28,621 | INFO     | . log creation = 0 s
[2025-10-26 00:02:48] 2025-10-25 22:01:28,621 | INFO     | ..............................
[2025-10-26 00:02:48] 2025-10-25 22:01:28,816 | INFO     | 
[2025-10-26 00:02:48] 2025-10-25 22:01:28,816 | INFO     | job summary report
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | --------------------------------------------------
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | PanDA job id: 6857015490
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | task id: 46771637
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | errors: (none)
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | pilot state: finished 
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | transexitcode: 0
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | exeerrorcode: 0
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | exeerrordiag: 
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | exitcode: 0
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | exitmsg: OK
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | cpuconsumptiontime: 41444 s
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | nevents: 400
[2025-10-26 00:02:48] 2025-10-25 22:01:28,817 | INFO     | neventsw: 0
[2025-10-26 00:02:48] 2025-10-25 22:01:28,818 | INFO     | pid: 2519651
[2025-10-26 00:02:48] 2025-10-25 22:01:28,818 | INFO     | pgrp: 2519651
[2025-10-26 00:02:48] 2025-10-25 22:01:28,818 | INFO     | corecount: 12
[2025-10-26 00:02:48] 2025-10-25 22:01:28,818 | INFO     | event service: False
[2025-10-26 00:02:48] 2025-10-25 22:01:28,818 | INFO     | sizes: {0: 2348053, 1: 2348739, 2: 2348938, 13: 2348938, 24: 2348994, 35: 2349022, 46: 2349440, 56: 2349468, 5979: 2376233, 5980: 2376232, 5982: 2385288, 5985: 238
[2025-10-26 00:02:48] 2025-10-25 22:01:28,818 | INFO     | --------------------------------------------------
[2025-10-26 00:02:48] 2025-10-25 22:01:28,818 | INFO     | 
[2025-10-26 00:02:48] 2025-10-25 22:01:28,818 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-10-26 00:02:48] 2025-10-25 22:01:29,015 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,015 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,015 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,015 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,016 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-26 00:02:48] 2025-10-25 22:01:29,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,017 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-26 00:02:48] 2025-10-25 22:01:29,017 | INFO     | job 6857015490 has completed (purged errors)
[2025-10-26 00:02:48] 2025-10-25 22:01:29,017 | INFO     | overall cleanup function is called
[2025-10-26 00:02:48] 2025-10-25 22:01:30,032 | INFO     | --- collectZombieJob: --- 10, [2519651]
[2025-10-26 00:02:48] 2025-10-25 22:01:30,032 | INFO     | zombie collector waiting for pid 2519651
[2025-10-26 00:02:48] 2025-10-25 22:01:30,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-26 00:02:48] 2025-10-25 22:01:30,033 | INFO     | collected zombie processes
[2025-10-26 00:02:48] 2025-10-25 22:01:30,033 | INFO     | will attempt to kill all subprocesses of pid=2519651
[2025-10-26 00:02:48] 2025-10-25 22:01:30,923 | INFO     | process IDs to be killed: [2519651] (in reverse order)
[2025-10-26 00:02:48] 2025-10-25 22:01:31,449 | WARNING  | found no corresponding commands to process id(s)
[2025-10-26 00:02:48] 2025-10-25 22:01:31,450 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-26 00:02:48] 2025-10-25 22:01:31,482 | INFO     | did not find any defunct processes belonging to 2519651
[2025-10-26 00:02:48] 2025-10-25 22:01:31,523 | INFO     | did not find any defunct processes belonging to 2519651
[2025-10-26 00:02:48] 2025-10-25 22:01:31,524 | INFO     | ready for new job
[2025-10-26 00:02:48] 2025-10-25 22:01:31,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-26 00:02:48] 2025-10-25 22:01:31,530 | INFO     | ***************************************
[2025-10-26 00:02:48] 2025-10-25 22:01:31,530 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-26 00:02:48] 2025-10-25 22:01:31,530 | INFO     | ***************************************
[2025-10-26 00:02:48] 2025-10-25 22:01:31,530 | INFO     | 
[2025-10-26 00:02:48] 2025-10-25 22:01:31,540 | INFO     | architecture information:
[2025-10-26 00:02:48] 2025-10-25 22:01:31,544 | INFO     | executing command: cat /etc/os-release
[2025-10-26 00:02:48] 2025-10-25 22:01:31,660 | INFO     | cat /etc/os-release:
[2025-10-26 00:02:48] NAME="CentOS Linux"
[2025-10-26 00:02:48] VERSION="7 (Core)"
[2025-10-26 00:02:48] ID="centos"
[2025-10-26 00:02:48] ID_LIKE="rhel fedora"
[2025-10-26 00:02:48] VERSION_ID="7"
[2025-10-26 00:02:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-26 00:02:48] ANSI_COLOR="0;31"
[2025-10-26 00:02:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-26 00:02:48] HOME_URL="https://www.centos.org/"
[2025-10-26 00:02:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-26 00:02:48] 
[2025-10-26 00:02:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-26 00:02:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-26 00:02:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-26 00:02:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-26 00:02:48] 
[2025-10-26 00:02:48] 2025-10-25 22:01:31,660 | INFO     | ***************************************
[2025-10-26 00:02:48] 2025-10-25 22:01:32,162 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-10-26 00:02:48] 2025-10-25 22:01:32,196 | INFO     | sufficient remaining disk space (1676719161344 B)
[2025-10-26 00:02:48] 2025-10-25 22:01:32,196 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-26 00:02:48] 2025-10-25 22:01:32,196 | INFO     | current server update state: UPDATING_FINAL
[2025-10-26 00:02:48] 2025-10-25 22:01:32,197 | INFO     | update_server=False
[2025-10-26 00:02:48] 2025-10-25 22:01:32,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-26 00:02:48] 2025-10-25 22:01:32,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-26 00:02:48] 2025-10-25 22:01:32,201 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-26 00:02:48] 2025-10-25 22:01:32,202 | INFO     | aborting loop
[2025-10-26 00:02:48] 2025-10-25 22:01:32,647 | INFO     | all payload control threads have been joined
[2025-10-26 00:02:48] 2025-10-25 22:01:33,102 | INFO     | all data control threads have been joined
[2025-10-26 00:02:48] 2025-10-25 22:01:33,202 | INFO     | [job] retrieve thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:33,207 | INFO     | [job] job monitor thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:33,285 | INFO     | [payload] validate_post thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:33,506 | INFO     | [payload] failed_post thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:33,653 | INFO     | [payload] control thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:33,718 | INFO     | [payload] validate_pre thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:33,773 | INFO     | [job] create_data_payload thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:33,779 | INFO     | [payload] execute_payloads thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:33,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-26 00:02:48] 2025-10-25 22:01:33,816 | INFO     | all job control threads have been joined
[2025-10-26 00:02:48] 2025-10-25 22:01:33,861 | INFO     | [data] copytool_in thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:34,114 | INFO     | [data] control thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:34,204 | INFO     | [data] copytool_out thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:34,469 | INFO     | [job] validate thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:34,806 | INFO     | [job] queue monitor thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:34,822 | INFO     | [job] control thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:34,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-26 00:02:48] 2025-10-25 22:01:38,929 | INFO     | [data] queue_monitor thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:42,558 | INFO     | job.realtimelogging is not enabled
[2025-10-26 00:02:48] 2025-10-25 22:01:43,566 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-26 00:02:48] 2025-10-25 22:01:45,662 | INFO     | [monitor] cgroup control has ended
[2025-10-26 00:02:48] 2025-10-25 22:01:46,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752135903040)>', '<ExcThread(monitor, started 139751650748160)>']
[2025-10-26 00:02:48] 2025-10-25 22:01:51,271 | INFO     | all workflow threads have been joined
[2025-10-26 00:02:48] 2025-10-25 22:01:51,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-26 00:02:48] 2025-10-25 22:01:51,272 | INFO     | traces error code: 0
[2025-10-26 00:02:48] 2025-10-25 22:01:51,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-26 00:02:48] 2025-10-25 22:02:01,460 | INFO     | PID=2480237 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-26 00:02:48] 2025-10-25 22:02:01,461 | INFO     | .. there are 84 such processes running
[2025-10-26 00:02:48] 2025-10-25 22:02:01,461 | INFO     | found 0 job(s) in 20 queues
[2025-10-26 00:02:48] 2025-10-25 22:02:01,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-26 00:02:48] 2025-10-25 22:02:01,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-26 00:02:48] 2025-10-25 22:02:01,462 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-26 00:02:48] 2025-10-25 22:02:01,462 | INFO     | [monitor] control thread has ended
[2025-10-26 00:02:48] 2025-10-25 22:02:01,892 [wrapper] ==== pilot stdout END ====
[2025-10-26 00:02:48] 2025-10-25 22:02:01,940 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-26 00:02:48] 2025-10-25 22:02:01,991 [wrapper] pilotpid: 2480237
[2025-10-26 00:02:48] 2025-10-25 22:02:02,027 [wrapper] Pilot exit status: 0
[2025-10-26 00:02:48] 2025-10-25 22:02:02,197 [wrapper] pandaids: 6857015490
[2025-10-26 00:02:48] 2025-10-25 22:02:02,615 [wrapper] cleanup supervisor_pilot 2767807 2480238
[2025-10-26 00:02:48] 2025-10-25 22:02:02,640 [wrapper] Test setup, not cleaning
[2025-10-26 00:02:48] 2025-10-25 22:02:02,671 [wrapper] apfmon messages muted
[2025-10-26 00:02:48] 2025-10-25 22:02:02,707 [wrapper] ==== wrapper stdout END ====
[2025-10-26 00:02:48] 2025-10-25 22:02:02,734 [wrapper] ==== wrapper stderr END ====
[2025-10-26 00:02:48]  *** Error codes and diagnostics ***
[2025-10-26 00:02:48]     "exeErrorCode": 0,
[2025-10-26 00:02:48]     "exeErrorDiag": "",
[2025-10-26 00:02:48]     "pilotErrorCode": 0,
[2025-10-26 00:02:48]     "pilotErrorDiag": "",
[2025-10-26 00:02:48]  *** Listing of results directory ***
[2025-10-26 00:02:48] total 430484
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc    557409 Oct 25 07:51 pilot3.tar.gz
[2025-10-26 00:02:48] -rwx------ 1 boinc boinc     36292 Oct 25 08:03 runpilot2-wrapper.sh
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc      5112 Oct 25 08:03 queuedata.json
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc       100 Oct 25 22:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-26 00:02:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 22:17 run_atlas
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc       105 Oct 25 22:17 job.xml
[2025-10-26 00:02:48] -rw-r--r-- 2 boinc boinc 227096572 Oct 25 22:18 EVNT.46771634._003659.pool.root.1
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc      6665 Oct 25 22:18 init_data.xml
[2025-10-26 00:02:48] -rw-r--r-- 2 boinc boinc     15120 Oct 25 22:18 start_atlas.sh
[2025-10-26 00:02:48] drwxrwx--x 2 boinc boinc      4096 Oct 25 22:18 shared
[2025-10-26 00:02:48] -rw-r--r-- 2 boinc boinc    569678 Oct 25 22:18 input.tar.gz
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc         0 Oct 25 22:18 boinc_lockfile
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc      2560 Oct 25 22:18 pandaJob.out
[2025-10-26 00:02:48] -rw------- 1 boinc boinc    978589 Oct 25 22:19 agis_schedconf.cvmfs.json
[2025-10-26 00:02:48] -rw------- 1 boinc boinc   1560772 Oct 25 22:19 agis_ddmendpoints.agis.ALL.json
[2025-10-26 00:02:48] drwx------ 5 boinc boinc      4096 Oct 25 22:19 pilot3
[2025-10-26 00:02:48] -rw------- 1 boinc boinc 207371018 Oct 26 00:00 HITS.46771637._131385.pool.root.1
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc       529 Oct 26 00:00 boinc_task_state.xml
[2025-10-26 00:02:48] -rw------- 1 boinc boinc      1020 Oct 26 00:00 memory_monitor_summary.json
[2025-10-26 00:02:48] -rw------- 1 boinc boinc    403119 Oct 26 00:00 log.46771637._131385.job.log.tgz.1
[2025-10-26 00:02:48] -rw------- 1 boinc boinc      7781 Oct 26 00:01 heartbeat.json
[2025-10-26 00:02:48] -rw------- 1 boinc boinc       823 Oct 26 00:02 pilotlog.txt
[2025-10-26 00:02:48] -rw------- 1 boinc boinc        95 Oct 26 00:02 pilot_heartbeat.json
[2025-10-26 00:02:48] -rw------- 1 boinc boinc    821640 Oct 26 00:02 log.46771637._131385.job.log.1
[2025-10-26 00:02:48] -rw------- 1 boinc boinc       357 Oct 26 00:02 output.list
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc       620 Oct 26 00:02 runtime_log
[2025-10-26 00:02:48] -rw------- 1 boinc boinc   1239040 Oct 26 00:02 result.tar.gz
[2025-10-26 00:02:48] -rw------- 1 boinc boinc       663 Oct 26 00:02 Uo5LDmyXmW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvCEODmvIoYin.diag
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc      8764 Oct 26 00:02 runtime_log.err
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc        26 Oct 26 00:02 wrapper_checkpoint.txt
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc      8192 Oct 26 00:02 boinc_mmap_file
[2025-10-26 00:02:48] -rw-r--r-- 1 boinc boinc     22468 Oct 26 00:02 stderr.txt
[2025-10-26 00:02:48] HITS file was successfully produced:
[2025-10-26 00:02:48] -rw------- 1 boinc boinc 207371018 Oct 26 00:00 shared/HITS.pool.root.1
[2025-10-26 00:02:49]  *** Contents of shared directory: ***
[2025-10-26 00:02:49] total 426084
[2025-10-26 00:02:49] -rw-r--r-- 2 boinc boinc 227096572 Oct 25 22:18 ATLAS.root_0
[2025-10-26 00:02:49] -rw-r--r-- 2 boinc boinc     15120 Oct 25 22:18 start_atlas.sh
[2025-10-26 00:02:49] -rw-r--r-- 2 boinc boinc    569678 Oct 25 22:18 input.tar.gz
[2025-10-26 00:02:49] -rw------- 1 boinc boinc 207371018 Oct 26 00:00 HITS.pool.root.1
[2025-10-26 00:02:49] -rw------- 1 boinc boinc   1239040 Oct 26 00:02 result.tar.gz
00:02:50 (2465792): run_atlas exited; CPU time 41784.130475
00:02:50 (2465792): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN