Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:21:20 (2664361): wrapper (7.7.26015): starting
23:21:20 (2664361): wrapper: running run_atlas (--nthreads 12)
[2025-10-25 23:21:20] Arguments: --nthreads 12
[2025-10-25 23:21:20] Threads: 12
[2025-10-25 23:21:20] Checking for CVMFS
[2025-10-25 23:21:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 23:21:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 23:21:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 23:23:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 23:23:04] 2.13.2.0 1918225 17551 192924 152131 0 85 30672167 46080001 50328 130560 0 113766386 99.959 13807765 23583 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-25 23:23:04] CVMFS is ok
[2025-10-25 23:23:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 23:23:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 23:23:04] Further information can be found at the LHC@home message board.
[2025-10-25 23:23:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 23:23:04] Checking for apptainer binary...
[2025-10-25 23:23:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 23:23:04] Running /usr/bin/apptainer --version
[2025-10-25 23:23:04] apptainer version 1.4.2-1.el9
[2025-10-25 23:23:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 23:23:05] mff2104.farm.particle.cz
[2025-10-25 23:23:05] apptainer works
[2025-10-25 23:23:05] Set ATHENA_PROC_NUMBER=12
[2025-10-25 23:23:05] Set ATHENA_CORE_NUMBER=12
[2025-10-25 23:23:05] Starting ATLAS job with PandaID=6857316732
[2025-10-25 23:23:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-26 01:02:04]  *** The last 200 lines of the pilot log: ***
[2025-10-26 01:02:04] 2025-10-25 22:57:05,762 | INFO     | monitor loop #400: job 0:6857316732 is in state 'finished'
[2025-10-26 01:02:04] 2025-10-25 22:57:05,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:04] 2025-10-25 22:57:05,965 | INFO     | time since job start (5552s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:07,972 | INFO     | time since job start (5554s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:08,267 | INFO     | monitor loop #401: job 0:6857316732 is in state 'finished'
[2025-10-26 01:02:04] 2025-10-25 22:57:08,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:04] 2025-10-25 22:57:09,979 | INFO     | time since job start (5556s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:10,772 | INFO     | monitor loop #402: job 0:6857316732 is in state 'finished'
[2025-10-26 01:02:04] 2025-10-25 22:57:10,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:04] 2025-10-25 22:57:11,986 | INFO     | time since job start (5558s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:13,277 | INFO     | monitor loop #403: job 0:6857316732 is in state 'finished'
[2025-10-26 01:02:04] 2025-10-25 22:57:13,277 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:04] 2025-10-25 22:57:13,993 | INFO     | time since job start (5560s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:15,795 | INFO     | monitor loop #404: job 0:6857316732 is in state 'finished'
[2025-10-26 01:02:04] 2025-10-25 22:57:15,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:04] 2025-10-25 22:57:15,873 | INFO     | PID=2681753 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-26 01:02:04] 2025-10-25 22:57:15,873 | INFO     | .. there are 81 such processes running
[2025-10-26 01:02:04] 2025-10-25 22:57:16,874 | INFO     | time since job start (5563s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:18,300 | INFO     | monitor loop #405: job 0:6857316732 is in state 'finished'
[2025-10-26 01:02:04] 2025-10-25 22:57:18,300 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:04] 2025-10-25 22:57:18,881 | INFO     | time since job start (5565s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:20,805 | INFO     | monitor loop #406: job 0:6857316732 is in state 'finished'
[2025-10-26 01:02:04] 2025-10-25 22:57:20,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:04] 2025-10-25 22:57:20,888 | INFO     | time since job start (5567s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:22,895 | INFO     | time since job start (5569s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:23,310 | INFO     | monitor loop #407: job 0:6857316732 is in state 'finished'
[2025-10-26 01:02:04] 2025-10-25 22:57:23,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:04] 2025-10-25 22:57:24,902 | INFO     | time since job start (5571s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:25,817 | INFO     | monitor loop #408: job 0:6857316732 is in state 'finished'
[2025-10-26 01:02:04] 2025-10-25 22:57:25,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:04] 2025-10-25 22:57:26,909 | INFO     | time since job start (5573s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:28,321 | INFO     | monitor loop #409: job 0:6857316732 is in state 'finished'
[2025-10-26 01:02:04] 2025-10-25 22:57:28,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-26 01:02:04] 2025-10-25 22:57:28,916 | INFO     | time since job start (5575s) is within the limit (172800.0s)
[2025-10-26 01:02:04] 2025-10-25 22:57:30,392 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-26 01:02:04] 2025-10-25 22:57:30,413 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2830.9470208333337
[2025-10-26 01:02:04] 2025-10-25 22:57:30,430 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6857316732/memory_monitor_summary.json (trf name=prmon)
[2025-10-26 01:02:04] 2025-10-25 22:57:30,430 | INFO     | extracted standard info from prmon json
[2025-10-26 01:02:04] 2025-10-25 22:57:30,430 | INFO     | extracted standard memory fields from prmon json
[2025-10-26 01:02:04] 2025-10-25 22:57:30,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-26 01:02:04] 2025-10-25 22:57:30,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-26 01:02:04] 2025-10-25 22:57:30,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-26 01:02:04] 2025-10-25 22:57:30,433 | INFO     | fitting pss+swap vs Time
[2025-10-26 01:02:04] 2025-10-25 22:57:30,433 | INFO     | sum of square deviations: 164765880.0
[2025-10-26 01:02:04] 2025-10-25 22:57:30,433 | INFO     | sum of deviations: 6353684299.000003
[2025-10-26 01:02:04] 2025-10-25 22:57:30,433 | INFO     | mean x: 1761430420.0
[2025-10-26 01:02:04] 2025-10-25 22:57:30,433 | INFO     | mean y: 2678263.5061728396
[2025-10-26 01:02:04] 2025-10-25 22:57:30,433 | INFO     | -- intersect: -67921413807.83154
[2025-10-26 01:02:04] 2025-10-25 22:57:30,434 | INFO     | intersect: -67921413807.83154
[2025-10-26 01:02:04] 2025-10-25 22:57:30,434 | INFO     | chi2: 0.6202660322251374
[2025-10-26 01:02:04] 2025-10-25 22:57:30,434 | INFO     | -- intersect: -67921413807.83154
[2025-10-26 01:02:04] 2025-10-25 22:57:30,434 | INFO     | current memory leak: 38.56 B/s (using 81 data points, chi2=0.62)
[2025-10-26 01:02:04] 2025-10-25 22:57:30,434 | INFO     | could have reported an average CPU frequency of 2811 MHz (7 samples)
[2025-10-26 01:02:04] 2025-10-25 22:57:30,434 | INFO     | ..............................
[2025-10-26 01:02:04] 2025-10-25 22:57:30,435 | INFO     | . Timing measurements:
[2025-10-26 01:02:04] 2025-10-25 22:57:30,435 | INFO     | . get job = 0 s
[2025-10-26 01:02:04] 2025-10-25 22:57:30,435 | INFO     | . initial setup = 5 s
[2025-10-26 01:02:04] 2025-10-25 22:57:30,435 | INFO     | . payload setup = 57 s
[2025-10-26 01:02:04] 2025-10-25 22:57:30,435 | INFO     | . stage-in = 0 s
[2025-10-26 01:02:04] 2025-10-25 22:57:30,435 | INFO     | . payload execution = 5368 s
[2025-10-26 01:02:04] 2025-10-25 22:57:30,435 | INFO     | . stage-out = 1 s
[2025-10-26 01:02:04] 2025-10-25 22:57:30,435 | INFO     | . log creation = 0 s
[2025-10-26 01:02:04] 2025-10-25 22:57:30,435 | INFO     | ..............................
[2025-10-26 01:02:04] 2025-10-25 22:57:30,536 | INFO     | 
[2025-10-26 01:02:04] 2025-10-25 22:57:30,536 | INFO     | job summary report
[2025-10-26 01:02:04] 2025-10-25 22:57:30,536 | INFO     | --------------------------------------------------
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | PanDA job id: 6857316732
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | task id: 46771637
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | errors: (none)
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | pilot state: finished 
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | transexitcode: 0
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | exeerrorcode: 0
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | exeerrordiag: 
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | exitcode: 0
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | exitmsg: OK
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | cpuconsumptiontime: 41610 s
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | nevents: 400
[2025-10-26 01:02:04] 2025-10-25 22:57:30,537 | INFO     | neventsw: 0
[2025-10-26 01:02:04] 2025-10-25 22:57:30,538 | INFO     | pid: 2709587
[2025-10-26 01:02:04] 2025-10-25 22:57:30,538 | INFO     | pgrp: 2709587
[2025-10-26 01:02:04] 2025-10-25 22:57:30,538 | INFO     | corecount: 12
[2025-10-26 01:02:04] 2025-10-25 22:57:30,538 | INFO     | event service: False
[2025-10-26 01:02:04] 2025-10-25 22:57:30,538 | INFO     | sizes: {0: 2348053, 1: 2348739, 2: 2348938, 13: 2348938, 23: 2348994, 34: 2349022, 45: 2349178, 47: 2349468, 56: 2349524, 5431: 2376318, 5433: 2385654, 5480: 23856
[2025-10-26 01:02:04] 2025-10-25 22:57:30,538 | INFO     | --------------------------------------------------
[2025-10-26 01:02:04] 2025-10-25 22:57:30,538 | INFO     | 
[2025-10-26 01:02:04] 2025-10-25 22:57:30,538 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-10-26 01:02:04] 2025-10-25 22:57:30,749 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,749 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,749 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,749 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-26 01:02:04] 2025-10-25 22:57:30,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-26 01:02:04] 2025-10-25 22:57:30,751 | INFO     | job 6857316732 has completed (purged errors)
[2025-10-26 01:02:04] 2025-10-25 22:57:30,751 | INFO     | overall cleanup function is called
[2025-10-26 01:02:04] 2025-10-25 22:57:31,761 | INFO     | --- collectZombieJob: --- 10, [2709587]
[2025-10-26 01:02:04] 2025-10-25 22:57:31,762 | INFO     | zombie collector waiting for pid 2709587
[2025-10-26 01:02:04] 2025-10-25 22:57:31,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-26 01:02:04] 2025-10-25 22:57:31,762 | INFO     | collected zombie processes
[2025-10-26 01:02:04] 2025-10-25 22:57:31,762 | INFO     | will attempt to kill all subprocesses of pid=2709587
[2025-10-26 01:02:04] 2025-10-25 22:57:32,555 | INFO     | process IDs to be killed: [2709587] (in reverse order)
[2025-10-26 01:02:04] 2025-10-25 22:57:32,994 | WARNING  | found no corresponding commands to process id(s)
[2025-10-26 01:02:04] 2025-10-25 22:57:32,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-26 01:02:04] 2025-10-25 22:57:33,024 | INFO     | did not find any defunct processes belonging to 2709587
[2025-10-26 01:02:04] 2025-10-25 22:57:33,053 | INFO     | did not find any defunct processes belonging to 2709587
[2025-10-26 01:02:04] 2025-10-25 22:57:33,054 | INFO     | ready for new job
[2025-10-26 01:02:04] 2025-10-25 22:57:33,054 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-26 01:02:04] 2025-10-25 22:57:33,056 | INFO     | ***************************************
[2025-10-26 01:02:04] 2025-10-25 22:57:33,057 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-26 01:02:04] 2025-10-25 22:57:33,057 | INFO     | ***************************************
[2025-10-26 01:02:04] 2025-10-25 22:57:33,057 | INFO     | 
[2025-10-26 01:02:04] 2025-10-25 22:57:33,063 | INFO     | architecture information:
[2025-10-26 01:02:04] 2025-10-25 22:57:33,064 | INFO     | executing command: cat /etc/os-release
[2025-10-26 01:02:04] 2025-10-25 22:57:33,212 | INFO     | cat /etc/os-release:
[2025-10-26 01:02:04] NAME="CentOS Linux"
[2025-10-26 01:02:04] VERSION="7 (Core)"
[2025-10-26 01:02:04] ID="centos"
[2025-10-26 01:02:04] ID_LIKE="rhel fedora"
[2025-10-26 01:02:04] VERSION_ID="7"
[2025-10-26 01:02:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-26 01:02:04] ANSI_COLOR="0;31"
[2025-10-26 01:02:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-26 01:02:04] HOME_URL="https://www.centos.org/"
[2025-10-26 01:02:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-26 01:02:04] 
[2025-10-26 01:02:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-26 01:02:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-26 01:02:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-26 01:02:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-26 01:02:04] 
[2025-10-26 01:02:04] 2025-10-25 22:57:33,212 | INFO     | ***************************************
[2025-10-26 01:02:04] 2025-10-25 22:57:33,715 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-10-26 01:02:04] 2025-10-25 22:57:33,824 | INFO     | sufficient remaining disk space (1677969063936 B)
[2025-10-26 01:02:04] 2025-10-25 22:57:33,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-26 01:02:04] 2025-10-25 22:57:33,824 | INFO     | current server update state: UPDATING_FINAL
[2025-10-26 01:02:04] 2025-10-25 22:57:33,824 | INFO     | update_server=False
[2025-10-26 01:02:04] 2025-10-25 22:57:33,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-26 01:02:04] 2025-10-25 22:57:33,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-26 01:02:04] 2025-10-25 22:57:34,059 | INFO     | all data control threads have been joined
[2025-10-26 01:02:04] 2025-10-25 22:57:34,188 | INFO     | all payload control threads have been joined
[2025-10-26 01:02:04] 2025-10-25 22:57:34,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-26 01:02:04] 2025-10-25 22:57:34,351 | INFO     | aborting loop
[2025-10-26 01:02:04] 2025-10-25 22:57:34,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-26 01:02:04] 2025-10-25 22:57:34,831 | INFO     | [job] retrieve thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:34,950 | INFO     | [data] copytool_in thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:35,007 | INFO     | [payload] validate_post thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:35,065 | INFO     | [data] control thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:35,169 | INFO     | all job control threads have been joined
[2025-10-26 01:02:04] 2025-10-25 22:57:35,194 | INFO     | [payload] control thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:35,329 | INFO     | [payload] failed_post thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:35,356 | INFO     | [job] job monitor thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:35,550 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-26 01:02:04] 2025-10-25 22:57:35,833 | INFO     | [payload] validate_pre thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:35,884 | INFO     | [job] create_data_payload thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:35,951 | INFO     | [data] copytool_out thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:36,098 | INFO     | [payload] execute_payloads thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:36,111 | INFO     | [job] validate thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:36,175 | INFO     | [job] control thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:36,556 | INFO     | [job] queue monitor thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:38,577 | INFO     | [data] queue_monitor thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:41,846 | INFO     | [monitor] cgroup control has ended
[2025-10-26 01:02:04] 2025-10-25 22:57:43,877 | INFO     | job.realtimelogging is not enabled
[2025-10-26 01:02:04] 2025-10-25 22:57:44,883 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-26 01:02:04] 2025-10-25 22:57:44,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950139651904)>', '<ExcThread(monitor, started 139949420570368)>']
[2025-10-26 01:02:04] 2025-10-25 22:57:49,921 | INFO     | all workflow threads have been joined
[2025-10-26 01:02:04] 2025-10-25 22:57:49,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-26 01:02:04] 2025-10-25 22:57:49,922 | INFO     | traces error code: 0
[2025-10-26 01:02:04] 2025-10-25 22:57:49,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-26 01:02:04] 2025-10-25 22:58:02,970 | INFO     | PID=2681753 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-26 01:02:04] 2025-10-25 22:58:02,970 | INFO     | .. there are 80 such processes running
[2025-10-26 01:02:04] 2025-10-25 22:58:02,971 | INFO     | found 0 job(s) in 20 queues
[2025-10-26 01:02:04] 2025-10-25 22:58:02,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-26 01:02:04] 2025-10-25 22:58:02,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-26 01:02:04] 2025-10-25 22:58:02,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-26 01:02:04] 2025-10-25 22:58:02,971 | CRITICAL | thread 'MainThread' is not alive
[2025-10-26 01:02:04] 2025-10-25 22:58:02,971 | INFO     | [monitor] control thread has ended
[2025-10-26 01:02:04] 2025-10-25 22:58:03,325 [wrapper] ==== pilot stdout END ====
[2025-10-26 01:02:04] 2025-10-25 22:58:03,347 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-26 01:02:04] 2025-10-25 22:58:03,363 [wrapper] pilotpid: 2681753
[2025-10-26 01:02:04] 2025-10-25 22:58:03,378 [wrapper] Pilot exit status: 0
[2025-10-26 01:02:04] 2025-10-25 22:58:03,457 [wrapper] pandaids: 6857316732
[2025-10-26 01:02:04] 2025-10-25 22:58:03,860 [wrapper] cleanup supervisor_pilot 2970664 2681754
[2025-10-26 01:02:04] 2025-10-25 22:58:03,896 [wrapper] Test setup, not cleaning
[2025-10-26 01:02:04] 2025-10-25 22:58:03,926 [wrapper] apfmon messages muted
[2025-10-26 01:02:04] 2025-10-25 22:58:03,970 [wrapper] ==== wrapper stdout END ====
[2025-10-26 01:02:04] 2025-10-25 22:58:04,012 [wrapper] ==== wrapper stderr END ====
[2025-10-26 01:02:04]  *** Error codes and diagnostics ***
[2025-10-26 01:02:04]     "exeErrorCode": 0,
[2025-10-26 01:02:04]     "exeErrorDiag": "",
[2025-10-26 01:02:04]     "pilotErrorCode": 0,
[2025-10-26 01:02:04]     "pilotErrorDiag": "",
[2025-10-26 01:02:04]  *** Listing of results directory ***
[2025-10-26 01:02:04] total 436816
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc    557409 Oct 25 07:51 pilot3.tar.gz
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc      5112 Oct 25 08:28 queuedata.json
[2025-10-26 01:02:04] -rwx------ 1 boinc boinc     36292 Oct 25 08:30 runpilot2-wrapper.sh
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc       100 Oct 25 23:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-26 01:02:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 23:21 run_atlas
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc       105 Oct 25 23:21 job.xml
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc      6665 Oct 25 23:21 init_data.xml
[2025-10-26 01:02:04] -rw-r--r-- 2 boinc boinc 232745381 Oct 25 23:21 EVNT.46771634._002091.pool.root.1
[2025-10-26 01:02:04] drwxrwx--x 2 boinc boinc      4096 Oct 25 23:21 shared
[2025-10-26 01:02:04] -rw-r--r-- 2 boinc boinc    569677 Oct 25 23:21 input.tar.gz
[2025-10-26 01:02:04] -rw-r--r-- 2 boinc boinc     15120 Oct 25 23:21 start_atlas.sh
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc         0 Oct 25 23:21 boinc_lockfile
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc      2560 Oct 25 23:23 pandaJob.out
[2025-10-26 01:02:04] -rw------- 1 boinc boinc    978581 Oct 25 23:24 agis_schedconf.cvmfs.json
[2025-10-26 01:02:04] -rw------- 1 boinc boinc   1560772 Oct 25 23:24 agis_ddmendpoints.agis.ALL.json
[2025-10-26 01:02:04] drwx------ 5 boinc boinc      4096 Oct 25 23:24 pilot3
[2025-10-26 01:02:04] -rw------- 1 boinc boinc 208290704 Oct 26 00:55 HITS.46771637._131652.pool.root.1
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc       528 Oct 26 00:55 boinc_task_state.xml
[2025-10-26 01:02:04] -rw------- 1 boinc boinc      1019 Oct 26 00:56 memory_monitor_summary.json
[2025-10-26 01:02:04] -rw------- 1 boinc boinc    403136 Oct 26 00:56 log.46771637._131652.job.log.tgz.1
[2025-10-26 01:02:04] -rw------- 1 boinc boinc      7781 Oct 26 00:57 heartbeat.json
[2025-10-26 01:02:04] -rw------- 1 boinc boinc        95 Oct 26 00:58 pilot_heartbeat.json
[2025-10-26 01:02:04] -rw------- 1 boinc boinc       893 Oct 26 00:58 pilotlog.txt
[2025-10-26 01:02:04] -rw------- 1 boinc boinc    774646 Oct 26 00:58 log.46771637._131652.job.log.1
[2025-10-26 01:02:04] -rw------- 1 boinc boinc       357 Oct 26 00:58 output.list
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc       620 Oct 26 00:58 runtime_log
[2025-10-26 01:02:04] -rw------- 1 boinc boinc   1198080 Oct 26 00:58 result.tar.gz
[2025-10-26 01:02:04] -rw------- 1 boinc boinc       663 Oct 26 00:58 ugQLDm0xmW8n9Rq4apOajLDm4fhM0noT9bVof3QYDm45mMDm5SPI1m.diag
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc      8764 Oct 26 00:58 runtime_log.err
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc      8192 Oct 26 01:02 boinc_mmap_file
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc        26 Oct 26 01:02 wrapper_checkpoint.txt
[2025-10-26 01:02:04] -rw-r--r-- 1 boinc boinc     22322 Oct 26 01:02 stderr.txt
[2025-10-26 01:02:04] HITS file was successfully produced:
[2025-10-26 01:02:04] -rw------- 1 boinc boinc 208290704 Oct 26 00:55 shared/HITS.pool.root.1
[2025-10-26 01:02:04]  *** Contents of shared directory: ***
[2025-10-26 01:02:04] total 432460
[2025-10-26 01:02:04] -rw-r--r-- 2 boinc boinc 232745381 Oct 25 23:21 ATLAS.root_0
[2025-10-26 01:02:04] -rw-r--r-- 2 boinc boinc    569677 Oct 25 23:21 input.tar.gz
[2025-10-26 01:02:04] -rw-r--r-- 2 boinc boinc     15120 Oct 25 23:21 start_atlas.sh
[2025-10-26 01:02:04] -rw------- 1 boinc boinc 208290704 Oct 26 00:55 HITS.pool.root.1
[2025-10-26 01:02:04] -rw------- 1 boinc boinc   1198080 Oct 26 00:58 result.tar.gz
01:02:06 (2664361): run_atlas exited; CPU time 41898.173670
01:02:06 (2664361): called boinc_finish(0)

</stderr_txt>
]]>

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