Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:35:36 (1956896): wrapper (7.7.26015): starting
20:35:36 (1956896): wrapper: running run_atlas (--nthreads 12)
[2025-10-25 20:35:37] Arguments: --nthreads 12
[2025-10-25 20:35:37] Threads: 12
[2025-10-25 20:35:37] Checking for CVMFS
[2025-10-25 20:35:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 20:35:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 20:35:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 20:35:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 20:35:39] 2.13.2.0 1918225 17385 185688 152127 2 215 30623904 46080000 49936 130560 0 112625780 99.958 13785566 23574 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-25 20:35:39] CVMFS is ok
[2025-10-25 20:35:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 20:35:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 20:35:39] Further information can be found at the LHC@home message board.
[2025-10-25 20:35:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 20:35:39] Checking for apptainer binary...
[2025-10-25 20:35:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 20:35:39] Running /usr/bin/apptainer --version
[2025-10-25 20:35:39] apptainer version 1.4.2-1.el9
[2025-10-25 20:35:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 20:35:40] mff2104.farm.particle.cz
[2025-10-25 20:35:40] apptainer works
[2025-10-25 20:35:40] Set ATHENA_PROC_NUMBER=12
[2025-10-25 20:35:40] Set ATHENA_CORE_NUMBER=12
[2025-10-25 20:35:41] Starting ATLAS job with PandaID=6856466087
[2025-10-25 20:35:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 22:17:52]  *** The last 200 lines of the pilot log: ***
[2025-10-25 22:17:52] 2025-10-25 20:16:44,645 | INFO     | monitor loop #412: job 0:6856466087 is in state 'finished'
[2025-10-25 22:17:52] 2025-10-25 20:16:44,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 22:17:52] 2025-10-25 20:16:46,558 | INFO     | time since job start (5978s) is within the limit (172800.0s)
[2025-10-25 22:17:52] 2025-10-25 20:16:47,157 | INFO     | monitor loop #413: job 0:6856466087 is in state 'finished'
[2025-10-25 22:17:52] 2025-10-25 20:16:47,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 22:17:52] 2025-10-25 20:16:48,570 | INFO     | time since job start (5980s) is within the limit (172800.0s)
[2025-10-25 22:17:52] 2025-10-25 20:16:49,676 | INFO     | monitor loop #414: job 0:6856466087 is in state 'finished'
[2025-10-25 22:17:52] 2025-10-25 20:16:49,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 22:17:52] 2025-10-25 20:16:50,581 | INFO     | time since job start (5982s) is within the limit (172800.0s)
[2025-10-25 22:17:52] 2025-10-25 20:16:52,184 | INFO     | monitor loop #415: job 0:6856466087 is in state 'finished'
[2025-10-25 22:17:52] 2025-10-25 20:16:52,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 22:17:52] 2025-10-25 20:16:52,588 | INFO     | time since job start (5984s) is within the limit (172800.0s)
[2025-10-25 22:17:52] 2025-10-25 20:16:54,603 | INFO     | time since job start (5986s) is within the limit (172800.0s)
[2025-10-25 22:17:52] 2025-10-25 20:16:54,688 | INFO     | monitor loop #416: job 0:6856466087 is in state 'finished'
[2025-10-25 22:17:52] 2025-10-25 20:16:54,688 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 22:17:52] 2025-10-25 20:16:56,611 | INFO     | time since job start (5988s) is within the limit (172800.0s)
[2025-10-25 22:17:52] 2025-10-25 20:16:57,194 | INFO     | monitor loop #417: job 0:6856466087 is in state 'finished'
[2025-10-25 22:17:52] 2025-10-25 20:16:57,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 22:17:52] 2025-10-25 20:16:58,617 | INFO     | time since job start (5990s) is within the limit (172800.0s)
[2025-10-25 22:17:52] 2025-10-25 20:16:59,706 | INFO     | monitor loop #418: job 0:6856466087 is in state 'finished'
[2025-10-25 22:17:52] 2025-10-25 20:16:59,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 22:17:52] 2025-10-25 20:17:01,018 | INFO     | PID=1965861 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-25 22:17:52] 2025-10-25 20:17:01,019 | INFO     | .. there are 86 such processes running
[2025-10-25 22:17:52] 2025-10-25 20:17:02,019 | INFO     | time since job start (5994s) is within the limit (172800.0s)
[2025-10-25 22:17:52] 2025-10-25 20:17:02,218 | INFO     | monitor loop #419: job 0:6856466087 is in state 'finished'
[2025-10-25 22:17:52] 2025-10-25 20:17:02,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 22:17:52] 2025-10-25 20:17:04,040 | INFO     | time since job start (5996s) is within the limit (172800.0s)
[2025-10-25 22:17:52] 2025-10-25 20:17:04,731 | INFO     | monitor loop #420: job 0:6856466087 is in state 'finished'
[2025-10-25 22:17:52] 2025-10-25 20:17:04,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 22:17:52] 2025-10-25 20:17:06,054 | INFO     | time since job start (5998s) is within the limit (172800.0s)
[2025-10-25 22:17:52] 2025-10-25 20:17:07,239 | INFO     | monitor loop #421: job 0:6856466087 is in state 'finished'
[2025-10-25 22:17:52] 2025-10-25 20:17:07,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 22:17:52] 2025-10-25 20:17:07,570 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-25 22:17:52] 2025-10-25 20:17:07,607 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2798.2681458333323
[2025-10-25 22:17:52] 2025-10-25 20:17:07,651 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6856466087/memory_monitor_summary.json (trf name=prmon)
[2025-10-25 22:17:52] 2025-10-25 20:17:07,652 | INFO     | extracted standard info from prmon json
[2025-10-25 22:17:52] 2025-10-25 20:17:07,652 | INFO     | extracted standard memory fields from prmon json
[2025-10-25 22:17:52] 2025-10-25 20:17:07,652 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-25 22:17:52] 2025-10-25 20:17:07,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-25 22:17:52] 2025-10-25 20:17:07,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-25 22:17:52] 2025-10-25 20:17:07,658 | INFO     | fitting pss+swap vs Time
[2025-10-25 22:17:52] 2025-10-25 20:17:07,658 | INFO     | sum of square deviations: 211311143.44318137
[2025-10-25 22:17:52] 2025-10-25 20:17:07,659 | INFO     | sum of deviations: -2960676566.136364
[2025-10-25 22:17:52] 2025-10-25 20:17:07,659 | INFO     | mean x: 1761420561.5795455
[2025-10-25 22:17:52] 2025-10-25 20:17:07,659 | INFO     | mean y: 2726398.590909091
[2025-10-25 22:17:52] 2025-10-25 20:17:07,659 | INFO     | -- intersect: 24681957672.45676
[2025-10-25 22:17:52] 2025-10-25 20:17:07,659 | INFO     | intersect: 24681957672.45676
[2025-10-25 22:17:52] 2025-10-25 20:17:07,659 | INFO     | chi2: 0.1560998062012381
[2025-10-25 22:17:52] 2025-10-25 20:17:07,660 | INFO     | -- intersect: 24681957672.45676
[2025-10-25 22:17:52] 2025-10-25 20:17:07,660 | INFO     | current memory leak: -14.01 B/s (using 88 data points, chi2=0.16)
[2025-10-25 22:17:52] 2025-10-25 20:17:07,660 | INFO     | could have reported an average CPU frequency of 2804 MHz (7 samples)
[2025-10-25 22:17:52] 2025-10-25 20:17:07,665 | INFO     | ..............................
[2025-10-25 22:17:52] 2025-10-25 20:17:07,665 | INFO     | . Timing measurements:
[2025-10-25 22:17:52] 2025-10-25 20:17:07,665 | INFO     | . get job = 0 s
[2025-10-25 22:17:52] 2025-10-25 20:17:07,665 | INFO     | . initial setup = 4 s
[2025-10-25 22:17:52] 2025-10-25 20:17:07,665 | INFO     | . payload setup = 53 s
[2025-10-25 22:17:52] 2025-10-25 20:17:07,666 | INFO     | . stage-in = 0 s
[2025-10-25 22:17:52] 2025-10-25 20:17:07,666 | INFO     | . payload execution = 5812 s
[2025-10-25 22:17:52] 2025-10-25 20:17:07,666 | INFO     | . stage-out = 2 s
[2025-10-25 22:17:52] 2025-10-25 20:17:07,666 | INFO     | . log creation = 0 s
[2025-10-25 22:17:52] 2025-10-25 20:17:07,666 | INFO     | ..............................
[2025-10-25 22:17:52] 2025-10-25 20:17:07,875 | INFO     | 
[2025-10-25 22:17:52] 2025-10-25 20:17:07,879 | INFO     | job summary report
[2025-10-25 22:17:52] 2025-10-25 20:17:07,879 | INFO     | --------------------------------------------------
[2025-10-25 22:17:52] 2025-10-25 20:17:07,879 | INFO     | PanDA job id: 6856466087
[2025-10-25 22:17:52] 2025-10-25 20:17:07,879 | INFO     | task id: 46771637
[2025-10-25 22:17:52] 2025-10-25 20:17:07,879 | INFO     | errors: (none)
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | pilot state: finished 
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | transexitcode: 0
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | exeerrorcode: 0
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | exeerrordiag: 
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | exitcode: 0
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | exitmsg: OK
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | cpuconsumptiontime: 40662 s
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | nevents: 400
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | neventsw: 0
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | pid: 1999570
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | pgrp: 1999570
[2025-10-25 22:17:52] 2025-10-25 20:17:07,880 | INFO     | corecount: 12
[2025-10-25 22:17:52] 2025-10-25 20:17:07,881 | INFO     | event service: False
[2025-10-25 22:17:52] 2025-10-25 20:17:07,881 | INFO     | sizes: {0: 2348709, 1: 2348793, 2: 2348992, 12: 2348992, 23: 2349020, 34: 2349048, 40: 2349466, 45: 2349494, 5869: 2376232, 5872: 2385232, 5875: 2385288, 5918: 238
[2025-10-25 22:17:52] 2025-10-25 20:17:07,881 | INFO     | --------------------------------------------------
[2025-10-25 22:17:52] 2025-10-25 20:17:07,881 | INFO     | 
[2025-10-25 22:17:52] 2025-10-25 20:17:07,881 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-10-25 22:17:52] 2025-10-25 20:17:08,066 | INFO     | time since job start (6000s) is within the limit (172800.0s)
[2025-10-25 22:17:52] 2025-10-25 20:17:08,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,069 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,069 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 22:17:52] 2025-10-25 20:17:08,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,070 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 22:17:52] 2025-10-25 20:17:08,070 | INFO     | job 6856466087 has completed (purged errors)
[2025-10-25 22:17:52] 2025-10-25 20:17:08,070 | INFO     | overall cleanup function is called
[2025-10-25 22:17:52] 2025-10-25 20:17:09,086 | INFO     | --- collectZombieJob: --- 10, [1999570]
[2025-10-25 22:17:52] 2025-10-25 20:17:09,086 | INFO     | zombie collector waiting for pid 1999570
[2025-10-25 22:17:52] 2025-10-25 20:17:09,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 22:17:52] 2025-10-25 20:17:09,086 | INFO     | collected zombie processes
[2025-10-25 22:17:52] 2025-10-25 20:17:09,086 | INFO     | will attempt to kill all subprocesses of pid=1999570
[2025-10-25 22:17:52] 2025-10-25 20:17:10,378 | INFO     | process IDs to be killed: [1999570] (in reverse order)
[2025-10-25 22:17:52] 2025-10-25 20:17:11,190 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 22:17:52] 2025-10-25 20:17:11,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 22:17:52] 2025-10-25 20:17:11,245 | INFO     | did not find any defunct processes belonging to 1999570
[2025-10-25 22:17:52] 2025-10-25 20:17:11,308 | INFO     | did not find any defunct processes belonging to 1999570
[2025-10-25 22:17:52] 2025-10-25 20:17:11,308 | INFO     | ready for new job
[2025-10-25 22:17:52] 2025-10-25 20:17:11,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 22:17:52] 2025-10-25 20:17:11,315 | INFO     | ***************************************
[2025-10-25 22:17:52] 2025-10-25 20:17:11,315 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 22:17:52] 2025-10-25 20:17:11,315 | INFO     | ***************************************
[2025-10-25 22:17:52] 2025-10-25 20:17:11,315 | INFO     | 
[2025-10-25 22:17:52] 2025-10-25 20:17:11,330 | INFO     | architecture information:
[2025-10-25 22:17:52] 2025-10-25 20:17:11,334 | INFO     | executing command: cat /etc/os-release
[2025-10-25 22:17:52] 2025-10-25 20:17:11,466 | INFO     | cat /etc/os-release:
[2025-10-25 22:17:52] NAME="CentOS Linux"
[2025-10-25 22:17:52] VERSION="7 (Core)"
[2025-10-25 22:17:52] ID="centos"
[2025-10-25 22:17:52] ID_LIKE="rhel fedora"
[2025-10-25 22:17:52] VERSION_ID="7"
[2025-10-25 22:17:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 22:17:52] ANSI_COLOR="0;31"
[2025-10-25 22:17:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 22:17:52] HOME_URL="https://www.centos.org/"
[2025-10-25 22:17:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 22:17:52] 
[2025-10-25 22:17:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 22:17:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 22:17:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 22:17:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 22:17:52] 
[2025-10-25 22:17:52] 2025-10-25 20:17:11,466 | INFO     | ***************************************
[2025-10-25 22:17:52] 2025-10-25 20:17:11,969 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-10-25 22:17:52] 2025-10-25 20:17:12,118 | INFO     | sufficient remaining disk space (1675501764608 B)
[2025-10-25 22:17:52] 2025-10-25 20:17:12,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 22:17:52] 2025-10-25 20:17:12,118 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 22:17:52] 2025-10-25 20:17:12,118 | INFO     | update_server=False
[2025-10-25 22:17:52] 2025-10-25 20:17:12,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 22:17:52] 2025-10-25 20:17:12,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 22:17:52] 2025-10-25 20:17:12,228 | INFO     | all data control threads have been joined
[2025-10-25 22:17:52] 2025-10-25 20:17:12,261 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-25 22:17:52] 2025-10-25 20:17:12,261 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-25 22:17:52] 2025-10-25 20:17:12,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 22:17:52] 2025-10-25 20:17:12,262 | INFO     | will abort loop
[2025-10-25 22:17:52] 2025-10-25 20:17:12,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 22:17:52] 2025-10-25 20:17:12,523 | INFO     | all payload control threads have been joined
[2025-10-25 22:17:52] 2025-10-25 20:17:12,653 | INFO     | all job control threads have been joined
[2025-10-25 22:17:52] 2025-10-25 20:17:12,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 22:17:52] 2025-10-25 20:17:13,124 | INFO     | [job] retrieve thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:13,218 | INFO     | [payload] validate_post thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:13,242 | INFO     | [data] control thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:13,266 | INFO     | [job] job monitor thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:13,339 | INFO     | [job] validate thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:13,342 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:13,529 | INFO     | [payload] control thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:13,595 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:13,658 | INFO     | [job] control thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:13,781 | INFO     | [payload] failed_post thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:13,896 | INFO     | [job] queue monitor thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:14,308 | INFO     | [data] copytool_out thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:14,347 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:14,376 | INFO     | [data] copytool_in thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:16,128 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:17,487 | INFO     | [monitor] cgroup control has ended
[2025-10-25 22:17:52] 2025-10-25 20:17:22,205 | INFO     | job.realtimelogging is not enabled
[2025-10-25 22:17:52] 2025-10-25 20:17:23,213 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 22:17:52] 2025-10-25 20:17:24,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753770641216)>', '<ExcThread(monitor, started 139753051641600)>']
[2025-10-25 22:17:52] 2025-10-25 20:17:29,369 | INFO     | all workflow threads have been joined
[2025-10-25 22:17:52] 2025-10-25 20:17:29,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 22:17:52] 2025-10-25 20:17:29,372 | INFO     | traces error code: 0
[2025-10-25 22:17:52] 2025-10-25 20:17:29,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 22:17:52] 2025-10-25 20:17:42,756 | INFO     | PID=1965861 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-25 22:17:52] 2025-10-25 20:17:42,757 | INFO     | .. there are 86 such processes running
[2025-10-25 22:17:52] 2025-10-25 20:17:42,757 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 22:17:52] 2025-10-25 20:17:42,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 22:17:52] 2025-10-25 20:17:42,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 22:17:52] 2025-10-25 20:17:42,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 22:17:52] 2025-10-25 20:17:42,757 | INFO     | [monitor] control thread has ended
[2025-10-25 22:17:52] 2025-10-25 20:17:43,446 [wrapper] ==== pilot stdout END ====
[2025-10-25 22:17:52] 2025-10-25 20:17:43,483 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 22:17:52] 2025-10-25 20:17:43,504 [wrapper] pilotpid: 1965861
[2025-10-25 22:17:52] 2025-10-25 20:17:43,545 [wrapper] Pilot exit status: 0
[2025-10-25 22:17:52] 2025-10-25 20:17:43,670 [wrapper] pandaids: 6856466087
[2025-10-25 22:17:52] 2025-10-25 20:17:44,082 [wrapper] cleanup supervisor_pilot 2436677 1965862
[2025-10-25 22:17:52] 2025-10-25 20:17:44,119 [wrapper] Test setup, not cleaning
[2025-10-25 22:17:52] 2025-10-25 20:17:44,143 [wrapper] apfmon messages muted
[2025-10-25 22:17:52] 2025-10-25 20:17:44,209 [wrapper] ==== wrapper stdout END ====
[2025-10-25 22:17:52] 2025-10-25 20:17:44,236 [wrapper] ==== wrapper stderr END ====
[2025-10-25 22:17:52]  *** Error codes and diagnostics ***
[2025-10-25 22:17:52]     "exeErrorCode": 0,
[2025-10-25 22:17:52]     "exeErrorDiag": "",
[2025-10-25 22:17:52]     "pilotErrorCode": 0,
[2025-10-25 22:17:52]     "pilotErrorDiag": "",
[2025-10-25 22:17:52]  *** Listing of results directory ***
[2025-10-25 22:17:52] total 425124
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc    557409 Oct 25 05:43 pilot3.tar.gz
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc      5112 Oct 25 06:08 queuedata.json
[2025-10-25 22:17:52] -rwx------ 1 boinc boinc     36292 Oct 25 06:09 runpilot2-wrapper.sh
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc       100 Oct 25 20:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 22:17:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 20:35 run_atlas
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc       105 Oct 25 20:35 job.xml
[2025-10-25 22:17:52] -rw-r--r-- 2 boinc boinc 228617909 Oct 25 20:35 EVNT.46771634._005199.pool.root.1
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc      6665 Oct 25 20:35 init_data.xml
[2025-10-25 22:17:52] -rw-r--r-- 2 boinc boinc     15120 Oct 25 20:35 start_atlas.sh
[2025-10-25 22:17:52] drwxrwx--x 2 boinc boinc      4096 Oct 25 20:35 shared
[2025-10-25 22:17:52] -rw-r--r-- 2 boinc boinc    569691 Oct 25 20:35 input.tar.gz
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc         0 Oct 25 20:35 boinc_lockfile
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc      2562 Oct 25 20:35 pandaJob.out
[2025-10-25 22:17:52] -rw------- 1 boinc boinc    978589 Oct 25 20:37 agis_schedconf.cvmfs.json
[2025-10-25 22:17:52] -rw------- 1 boinc boinc   1560772 Oct 25 20:37 agis_ddmendpoints.agis.ALL.json
[2025-10-25 22:17:52] drwx------ 5 boinc boinc      4096 Oct 25 20:37 pilot3
[2025-10-25 22:17:52] -rw------- 1 boinc boinc 200365461 Oct 25 22:15 HITS.46771637._130596.pool.root.1
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc       529 Oct 25 22:15 boinc_task_state.xml
[2025-10-25 22:17:52] -rw------- 1 boinc boinc      1020 Oct 25 22:16 memory_monitor_summary.json
[2025-10-25 22:17:52] -rw------- 1 boinc boinc    403876 Oct 25 22:16 log.46771637._130596.job.log.tgz.1
[2025-10-25 22:17:52] -rw------- 1 boinc boinc        95 Oct 25 22:16 pilot_heartbeat.json
[2025-10-25 22:17:52] -rw------- 1 boinc boinc      7784 Oct 25 22:17 heartbeat.json
[2025-10-25 22:17:52] -rw------- 1 boinc boinc       823 Oct 25 22:17 pilotlog.txt
[2025-10-25 22:17:52] -rw------- 1 boinc boinc    816359 Oct 25 22:17 log.46771637._130596.job.log.1
[2025-10-25 22:17:52] -rw------- 1 boinc boinc       357 Oct 25 22:17 output.list
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc       620 Oct 25 22:17 runtime_log
[2025-10-25 22:17:52] -rw------- 1 boinc boinc   1239040 Oct 25 22:17 result.tar.gz
[2025-10-25 22:17:52] -rw------- 1 boinc boinc       663 Oct 25 22:17 VivKDmflkW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmltmMDm5wRdtn.diag
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc      8764 Oct 25 22:17 runtime_log.err
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc        26 Oct 25 22:17 wrapper_checkpoint.txt
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc      8192 Oct 25 22:17 boinc_mmap_file
[2025-10-25 22:17:52] -rw-r--r-- 1 boinc boinc     22352 Oct 25 22:17 stderr.txt
[2025-10-25 22:17:53] HITS file was successfully produced:
[2025-10-25 22:17:53] -rw------- 1 boinc boinc 200365461 Oct 25 22:15 shared/HITS.pool.root.1
[2025-10-25 22:17:53]  *** Contents of shared directory: ***
[2025-10-25 22:17:53] total 420728
[2025-10-25 22:17:53] -rw-r--r-- 2 boinc boinc 228617909 Oct 25 20:35 ATLAS.root_0
[2025-10-25 22:17:53] -rw-r--r-- 2 boinc boinc     15120 Oct 25 20:35 start_atlas.sh
[2025-10-25 22:17:53] -rw-r--r-- 2 boinc boinc    569691 Oct 25 20:35 input.tar.gz
[2025-10-25 22:17:53] -rw------- 1 boinc boinc 200365461 Oct 25 22:15 HITS.pool.root.1
[2025-10-25 22:17:53] -rw------- 1 boinc boinc   1239040 Oct 25 22:17 result.tar.gz
22:17:55 (1956896): run_atlas exited; CPU time 40968.128071
22:17:55 (1956896): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN