Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:36:20 (546679): wrapper (7.7.26015): starting
22:36:20 (546679): wrapper: running run_atlas (--nthreads 4)
[2025-10-25 22:36:20] Arguments: --nthreads 4
[2025-10-25 22:36:20] Threads: 4
[2025-10-25 22:36:20] Checking for CVMFS
[2025-10-25 22:36:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 22:36:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 22:36:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 22:36:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 22:36:20] 2.9.2.0 2150638 7105 96720 152129 0 56 25079739 36864000 0 130560 0 6794493 99.992 263490 1131 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-25 22:36:20] CVMFS is ok
[2025-10-25 22:36:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 22:36:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 22:36:20] Further information can be found at the LHC@home message board.
[2025-10-25 22:36:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 22:36:20] Checking for apptainer binary...
[2025-10-25 22:36:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 22:36:20] Running /usr/bin/apptainer --version
[2025-10-25 22:36:20] apptainer version 1.4.1-1.1
[2025-10-25 22:36:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 22:36:20] thA315b
[2025-10-25 22:36:20] apptainer works
[2025-10-25 22:36:20] Set ATHENA_PROC_NUMBER=4
[2025-10-25 22:36:20] Set ATHENA_CORE_NUMBER=4
[2025-10-25 22:36:20] Starting ATLAS job with PandaID=6856351388
[2025-10-25 22:36:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 23:47:57]  *** The last 200 lines of the pilot log: ***
[2025-10-25 23:47:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 23:47:57] 
[2025-10-25 23:47:57] 2025-10-25 21:47:26,730 | INFO     | ***************************************
[2025-10-25 23:47:57] 2025-10-25 21:47:27,233 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-25 23:47:57] 2025-10-25 21:47:27,247 | INFO     | sufficient remaining disk space (335536979968 B)
[2025-10-25 23:47:57] 2025-10-25 21:47:27,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 23:47:57] 2025-10-25 21:47:27,247 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 23:47:57] 2025-10-25 21:47:27,247 | INFO     | update_server=False
[2025-10-25 23:47:57] 2025-10-25 21:47:27,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 23:47:57] 2025-10-25 21:47:27,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 23:47:57] 2025-10-25 21:47:27,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 23:47:57] 2025-10-25 21:47:27,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 23:47:57] 2025-10-25 21:47:27,436 | INFO     | all job control threads have been joined
[2025-10-25 23:47:57] 2025-10-25 21:47:27,541 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-25 23:47:57] 2025-10-25 21:47:27,541 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-25 23:47:57] 2025-10-25 21:47:27,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 23:47:57] 2025-10-25 21:47:27,541 | INFO     | will abort loop
[2025-10-25 23:47:57] 2025-10-25 21:47:27,942 | INFO     | all data control threads have been joined
[2025-10-25 23:47:57] 2025-10-25 21:47:28,253 | INFO     | [job] retrieve thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:28,253 | INFO     | [job] queue monitor thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:28,296 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:28,390 | INFO     | all payload control threads have been joined
[2025-10-25 23:47:57] 2025-10-25 21:47:28,437 | INFO     | [job] control thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:28,547 | INFO     | [job] job monitor thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:28,775 | INFO     | [payload] failed_post thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:28,947 | INFO     | [data] control thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:29,052 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:29,253 | INFO     | [data] copytool_out thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:29,396 | INFO     | [payload] control thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:29,441 | INFO     | [data] copytool_in thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:29,581 | INFO     | [payload] validate_post thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:29,628 | INFO     | [job] validate thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:29,716 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:31,254 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:33,072 | INFO     | [monitor] cgroup control has ended
[2025-10-25 23:47:57] 2025-10-25 21:47:37,610 | INFO     | job.realtimelogging is not enabled
[2025-10-25 23:47:57] 2025-10-25 21:47:38,616 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 23:47:57] 2025-10-25 21:47:39,144 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139780931757888)>', '<ExcThread(monitor, started 139780281054976)>']
[2025-10-25 23:47:57] 2025-10-25 21:47:44,170 | INFO     | all workflow threads have been joined
[2025-10-25 23:47:57] 2025-10-25 21:47:44,170 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 23:47:57] 2025-10-25 21:47:44,170 | INFO     | traces error code: 0
[2025-10-25 23:47:57] 2025-10-25 21:47:44,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 23:47:57] 2025-10-25 21:47:57,101 | INFO     | PID=550488 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-25 23:47:57] 2025-10-25 21:47:57,101 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 23:47:57] 2025-10-25 21:47:57,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 23:47:57] 2025-10-25 21:47:57,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 23:47:57] 2025-10-25 21:47:57,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 23:47:57] 2025-10-25 21:47:57,102 | CRITICAL | thread 'MainThread' is not alive
[2025-10-25 23:47:57] 2025-10-25 21:47:57,102 | INFO     | [monitor] control thread has ended
[2025-10-25 23:47:57] 2025-10-25 21:47:57,152 [wrapper] ==== pilot stdout END ====
[2025-10-25 23:47:57] 2025-10-25 21:47:57,154 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 23:47:57] 2025-10-25 21:47:57,157 [wrapper] pilotpid: 550488
[2025-10-25 23:47:57] 2025-10-25 21:47:57,159 [wrapper] Pilot exit status: 0
[2025-10-25 23:47:57] 2025-10-25 21:47:57,167 [wrapper] pandaids: 6856351388
[2025-10-25 23:47:57] 2025-10-25 21:47:57,186 [wrapper] cleanup supervisor_pilot  566451 550489
[2025-10-25 23:47:57] 2025-10-25 21:47:57,188 [wrapper] Test setup, not cleaning
[2025-10-25 23:47:57] 2025-10-25 21:47:57,191 [wrapper] apfmon messages muted
[2025-10-25 23:47:57] 2025-10-25 21:47:57,194 [wrapper] ==== wrapper stdout END ====
[2025-10-25 23:47:57] 2025-10-25 21:47:57,196 [wrapper] ==== wrapper stderr END ====
[2025-10-25 23:47:57]  *** Error codes and diagnostics ***
[2025-10-25 23:47:57]     "exeErrorCode": 0,
[2025-10-25 23:47:57]     "exeErrorDiag": "",
[2025-10-25 23:47:57]     "pilotErrorCode": 0,
[2025-10-25 23:47:57]     "pilotErrorDiag": "",
[2025-10-25 23:47:57]  *** Listing of results directory ***
[2025-10-25 23:47:57] total 434436
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc    557409 Oct 25 04:48 pilot3.tar.gz
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc      5112 Oct 25 05:38 queuedata.json
[2025-10-25 23:47:57] -rwx------ 1 boinc boinc     36292 Oct 25 05:40 runpilot2-wrapper.sh
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc       100 Oct 25 22:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 23:47:57] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 22:36 run_atlas
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc       105 Oct 25 22:36 job.xml
[2025-10-25 23:47:57] -rw-r--r-- 2 boinc boinc 226125822 Oct 25 22:36 EVNT.46771634._005181.pool.root.1
[2025-10-25 23:47:57] -rw-r--r-- 2 boinc boinc    569686 Oct 25 22:36 input.tar.gz
[2025-10-25 23:47:57] -rw-r--r-- 2 boinc boinc     15120 Oct 25 22:36 start_atlas.sh
[2025-10-25 23:47:57] drwxrwx--x 2 boinc boinc      4096 Oct 25 22:36 shared
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc         0 Oct 25 22:36 boinc_setup_complete
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc      6443 Oct 25 22:36 init_data.xml
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc         0 Oct 25 22:36 boinc_lockfile
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc      2562 Oct 25 22:36 pandaJob.out
[2025-10-25 23:47:57] -rw------- 1 boinc boinc    978589 Oct 25 22:36 agis_schedconf.cvmfs.json
[2025-10-25 23:47:57] -rw------- 1 boinc boinc   1560772 Oct 25 22:36 agis_ddmendpoints.agis.ALL.json
[2025-10-25 23:47:57] drwx------ 5 boinc boinc      4096 Oct 25 22:36 pilot3
[2025-10-25 23:47:57] -rw------- 1 boinc boinc 213046488 Oct 25 23:47 HITS.46771637._130049.pool.root.1
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc       529 Oct 25 23:47 boinc_task_state.xml
[2025-10-25 23:47:57] -rw------- 1 boinc boinc      1015 Oct 25 23:47 memory_monitor_summary.json
[2025-10-25 23:47:57] -rw------- 1 boinc boinc    264478 Oct 25 23:47 log.46771637._130049.job.log.tgz.1
[2025-10-25 23:47:57] -rw------- 1 boinc boinc      7752 Oct 25 23:47 heartbeat.json
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc        27 Oct 25 23:47 wrapper_checkpoint.txt
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc      8192 Oct 25 23:47 boinc_mmap_file
[2025-10-25 23:47:57] -rw------- 1 boinc boinc       816 Oct 25 23:47 pilotlog.txt
[2025-10-25 23:47:57] -rw------- 1 boinc boinc        95 Oct 25 23:47 pilot_heartbeat.json
[2025-10-25 23:47:57] -rw------- 1 boinc boinc    633259 Oct 25 23:47 log.46771637._130049.job.log.1
[2025-10-25 23:47:57] -rw------- 1 boinc boinc       357 Oct 25 23:47 output.list
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc       620 Oct 25 23:47 runtime_log
[2025-10-25 23:47:57] -rw------- 1 boinc boinc    921600 Oct 25 23:47 result.tar.gz
[2025-10-25 23:47:57] -rw------- 1 boinc boinc       659 Oct 25 23:47 uuKLDmeJkW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3wDODmQVx77n.diag
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc      8782 Oct 25 23:47 runtime_log.err
[2025-10-25 23:47:57] -rw-r--r-- 1 boinc boinc      8455 Oct 25 23:47 stderr.txt
[2025-10-25 23:47:57] HITS file was successfully produced:
[2025-10-25 23:47:57] -rw------- 1 boinc boinc 213046488 Oct 25 23:47 shared/HITS.pool.root.1
[2025-10-25 23:47:57]  *** Contents of shared directory: ***
[2025-10-25 23:47:57] total 430368
[2025-10-25 23:47:57] -rw-r--r-- 2 boinc boinc 226125822 Oct 25 22:36 ATLAS.root_0
[2025-10-25 23:47:57] -rw-r--r-- 2 boinc boinc    569686 Oct 25 22:36 input.tar.gz
[2025-10-25 23:47:57] -rw-r--r-- 2 boinc boinc     15120 Oct 25 22:36 start_atlas.sh
[2025-10-25 23:47:57] -rw------- 1 boinc boinc 213046488 Oct 25 23:47 HITS.pool.root.1
[2025-10-25 23:47:57] -rw------- 1 boinc boinc    921600 Oct 25 23:47 result.tar.gz
23:47:58 (546679): run_atlas exited; CPU time 16015.330865
23:47:58 (546679): called boinc_finish(0)

</stderr_txt>
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