Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:09:25 (1545975): wrapper (7.7.26015): starting
19:09:25 (1545975): wrapper: running run_atlas (--nthreads 12)
[2025-10-25 19:09:25] Arguments: --nthreads 12
[2025-10-25 19:09:25] Threads: 12
[2025-10-25 19:09:25] Checking for CVMFS
[2025-10-25 19:09:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 19:09:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 19:09:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 19:09:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 19:09:27] 2.13.2.0 1918225 17299 196028 152124 0 339 30186410 46080001 49227 130560 0 111714686 99.958 13746390 23587 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-25 19:09:27] CVMFS is ok
[2025-10-25 19:09:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 19:09:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 19:09:27] Further information can be found at the LHC@home message board.
[2025-10-25 19:09:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 19:09:27] Checking for apptainer binary...
[2025-10-25 19:09:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 19:09:28] Running /usr/bin/apptainer --version
[2025-10-25 19:09:28] apptainer version 1.4.2-1.el9
[2025-10-25 19:09:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 19:09:28] mff2104.farm.particle.cz
[2025-10-25 19:09:28] apptainer works
[2025-10-25 19:09:28] Set ATHENA_PROC_NUMBER=12
[2025-10-25 19:09:28] Set ATHENA_CORE_NUMBER=12
[2025-10-25 19:09:28] Starting ATLAS job with PandaID=6856223833
[2025-10-25 19:09:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 21:32:21]  *** The last 200 lines of the pilot log: ***
[2025-10-25 21:32:21] 2025-10-25 19:27:33,645 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-25 21:32:21] 2025-10-25 19:27:33,688 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2769.51253125
[2025-10-25 21:32:21] 2025-10-25 19:27:33,722 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6856223833/memory_monitor_summary.json (trf name=prmon)
[2025-10-25 21:32:21] 2025-10-25 19:27:33,723 | INFO     | extracted standard info from prmon json
[2025-10-25 21:32:21] 2025-10-25 19:27:33,723 | INFO     | extracted standard memory fields from prmon json
[2025-10-25 21:32:21] 2025-10-25 19:27:33,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-25 21:32:21] 2025-10-25 19:27:33,724 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-25 21:32:21] 2025-10-25 19:27:33,724 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-25 21:32:21] 2025-10-25 19:27:33,726 | INFO     | fitting pss+swap vs Time
[2025-10-25 21:32:21] 2025-10-25 19:27:33,726 | INFO     | sum of square deviations: 697054930.0
[2025-10-25 21:32:21] 2025-10-25 19:27:33,727 | INFO     | sum of deviations: 28552177828.999996
[2025-10-25 21:32:21] 2025-10-25 19:27:33,727 | INFO     | mean x: 1761416421.0
[2025-10-25 21:32:21] 2025-10-25 19:27:33,727 | INFO     | mean y: 2609498.4045801526
[2025-10-25 21:32:21] 2025-10-25 19:27:33,727 | INFO     | -- intersect: -72147048611.48457
[2025-10-25 21:32:21] 2025-10-25 19:27:33,727 | INFO     | intersect: -72147048611.48457
[2025-10-25 21:32:21] 2025-10-25 19:27:33,728 | INFO     | chi2: 4.2330867087041675
[2025-10-25 21:32:21] 2025-10-25 19:27:33,728 | INFO     | sum of square deviations: 620244187.5
[2025-10-25 21:32:21] 2025-10-25 19:27:33,729 | INFO     | sum of deviations: 36876142211.5
[2025-10-25 21:32:21] 2025-10-25 19:27:33,729 | INFO     | mean x: 1761416268.5
[2025-10-25 21:32:21] 2025-10-25 19:27:33,729 | INFO     | mean y: 2625440.134920635
[2025-10-25 21:32:21] 2025-10-25 19:27:33,729 | INFO     | -- intersect: -104721027146.8644
[2025-10-25 21:32:21] 2025-10-25 19:27:33,729 | INFO     | intersect: -104721027146.8644
[2025-10-25 21:32:21] 2025-10-25 19:27:33,729 | INFO     | chi2: 3.459728457633778
[2025-10-25 21:32:21] 2025-10-25 19:27:33,729 | INFO     | current chi2=3.459728457633778 (change=18.269369476419957 %)
[2025-10-25 21:32:21] 2025-10-25 19:27:33,729 | INFO     | right removable region: 125
[2025-10-25 21:32:21] 2025-10-25 19:27:33,730 | INFO     | sum of square deviations: 620244187.5
[2025-10-25 21:32:21] 2025-10-25 19:27:33,730 | INFO     | sum of deviations: -9338256278.5
[2025-10-25 21:32:21] 2025-10-25 19:27:33,730 | INFO     | mean x: 1761416573.5
[2025-10-25 21:32:21] 2025-10-25 19:27:33,730 | INFO     | mean y: 2684240.6746031744
[2025-10-25 21:32:21] 2025-10-25 19:27:33,730 | INFO     | -- intersect: 26522173996.538425
[2025-10-25 21:32:21] 2025-10-25 19:27:33,731 | INFO     | intersect: 26522173996.538425
[2025-10-25 21:32:21] 2025-10-25 19:27:33,731 | INFO     | chi2: 1.0724550792756045
[2025-10-25 21:32:21] 2025-10-25 19:27:33,731 | INFO     | current chi2=1.0724550792756045 (change=74.66493948563826 %)
[2025-10-25 21:32:21] 2025-10-25 19:27:33,731 | INFO     | sum of square deviations: 549294020.0
[2025-10-25 21:32:21] 2025-10-25 19:27:33,732 | INFO     | sum of deviations: -17890611310.0
[2025-10-25 21:32:21] 2025-10-25 19:27:33,732 | INFO     | mean x: 1761416726.0
[2025-10-25 21:32:21] 2025-10-25 19:27:33,732 | INFO     | mean y: 2702407.140495868
[2025-10-25 21:32:21] 2025-10-25 19:27:33,732 | INFO     | -- intersect: 57372382127.66389
[2025-10-25 21:32:21] 2025-10-25 19:27:33,732 | INFO     | intersect: 57372382127.66389
[2025-10-25 21:32:21] 2025-10-25 19:27:33,732 | INFO     | chi2: 0.8617552497678808
[2025-10-25 21:32:21] 2025-10-25 19:27:33,732 | INFO     | current chi2=0.8617552497678808 (change=19.646494625214704 %)
[2025-10-25 21:32:21] 2025-10-25 19:27:33,732 | INFO     | left removable region: 20
[2025-10-25 21:32:21] 2025-10-25 19:27:33,733 | INFO     | sum of square deviations: 358927660.0
[2025-10-25 21:32:21] 2025-10-25 19:27:33,733 | INFO     | sum of deviations: -7102627475.999999
[2025-10-25 21:32:21] 2025-10-25 19:27:33,733 | INFO     | mean x: 1761416848.0
[2025-10-25 21:32:21] 2025-10-25 19:27:33,733 | INFO     | mean y: 2720395.1523809526
[2025-10-25 21:32:21] 2025-10-25 19:27:33,733 | INFO     | -- intersect: 34858456231.43235
[2025-10-25 21:32:21] 2025-10-25 19:27:33,733 | INFO     | intersect: 34858456231.43235
[2025-10-25 21:32:21] 2025-10-25 19:27:33,734 | INFO     | chi2: 0.016905018895871256
[2025-10-25 21:32:21] 2025-10-25 19:27:33,734 | INFO     | -- intersect: 34858456231.43235
[2025-10-25 21:32:21] 2025-10-25 19:27:33,734 | INFO     | current memory leak: -19.79 B/s (using 105 data points, chi2=0.02)
[2025-10-25 21:32:21] 2025-10-25 19:27:33,734 | INFO     | could have reported an average CPU frequency of 2797 MHz (8 samples)
[2025-10-25 21:32:21] 2025-10-25 19:27:33,734 | INFO     | ..............................
[2025-10-25 21:32:21] 2025-10-25 19:27:33,734 | INFO     | . Timing measurements:
[2025-10-25 21:32:21] 2025-10-25 19:27:33,735 | INFO     | . get job = 0 s
[2025-10-25 21:32:21] 2025-10-25 19:27:33,735 | INFO     | . initial setup = 4 s
[2025-10-25 21:32:21] 2025-10-25 19:27:33,735 | INFO     | . payload setup = 56 s
[2025-10-25 21:32:21] 2025-10-25 19:27:33,735 | INFO     | . stage-in = 0 s
[2025-10-25 21:32:21] 2025-10-25 19:27:33,735 | INFO     | . payload execution = 7994 s
[2025-10-25 21:32:21] 2025-10-25 19:27:33,735 | INFO     | . stage-out = 2 s
[2025-10-25 21:32:21] 2025-10-25 19:27:33,735 | INFO     | . log creation = 0 s
[2025-10-25 21:32:21] 2025-10-25 19:27:33,735 | INFO     | ..............................
[2025-10-25 21:32:21] 2025-10-25 19:27:33,864 | INFO     | 
[2025-10-25 21:32:21] 2025-10-25 19:27:33,865 | INFO     | job summary report
[2025-10-25 21:32:21] 2025-10-25 19:27:33,865 | INFO     | --------------------------------------------------
[2025-10-25 21:32:21] 2025-10-25 19:27:33,865 | INFO     | PanDA job id: 6856223833
[2025-10-25 21:32:21] 2025-10-25 19:27:33,865 | INFO     | task id: 46771637
[2025-10-25 21:32:21] 2025-10-25 19:27:33,865 | INFO     | errors: (none)
[2025-10-25 21:32:21] 2025-10-25 19:27:33,865 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 21:32:21] 2025-10-25 19:27:33,865 | INFO     | pilot state: finished 
[2025-10-25 21:32:21] 2025-10-25 19:27:33,865 | INFO     | transexitcode: 0
[2025-10-25 21:32:21] 2025-10-25 19:27:33,865 | INFO     | exeerrorcode: 0
[2025-10-25 21:32:21] 2025-10-25 19:27:33,865 | INFO     | exeerrordiag: 
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | exitcode: 0
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | exitmsg: OK
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | cpuconsumptiontime: 43418 s
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | nevents: 400
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | neventsw: 0
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | pid: 1589570
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | pgrp: 1589570
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | corecount: 12
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | event service: False
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | sizes: {0: 2348765, 1: 2348964, 12: 2348964, 23: 2348992, 34: 2349020, 44: 2349466, 8052: 2377308, 8055: 2386308, 8058: 2386364, 8103: 2386558}
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | --------------------------------------------------
[2025-10-25 21:32:21] 2025-10-25 19:27:33,866 | INFO     | 
[2025-10-25 21:32:21] 2025-10-25 19:27:33,867 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-10-25 21:32:21] 2025-10-25 19:27:34,061 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,061 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,061 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,061 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,061 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 21:32:21] 2025-10-25 19:27:34,062 | INFO     | job 6856223833 has completed (purged errors)
[2025-10-25 21:32:21] 2025-10-25 19:27:34,063 | INFO     | overall cleanup function is called
[2025-10-25 21:32:21] 2025-10-25 19:27:35,087 | INFO     | --- collectZombieJob: --- 10, [1589570]
[2025-10-25 21:32:21] 2025-10-25 19:27:35,087 | INFO     | zombie collector waiting for pid 1589570
[2025-10-25 21:32:21] 2025-10-25 19:27:35,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 21:32:21] 2025-10-25 19:27:35,088 | INFO     | collected zombie processes
[2025-10-25 21:32:21] 2025-10-25 19:27:35,088 | INFO     | will attempt to kill all subprocesses of pid=1589570
[2025-10-25 21:32:21] 2025-10-25 19:27:35,937 | INFO     | PID=1556406 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-25 21:32:21] 2025-10-25 19:27:35,937 | INFO     | .. there are 86 such processes running
[2025-10-25 21:32:21] 2025-10-25 19:27:36,461 | INFO     | process IDs to be killed: [1589570] (in reverse order)
[2025-10-25 21:32:21] 2025-10-25 19:27:37,275 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 21:32:21] 2025-10-25 19:27:37,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 21:32:21] 2025-10-25 19:27:37,328 | INFO     | did not find any defunct processes belonging to 1589570
[2025-10-25 21:32:21] 2025-10-25 19:27:37,387 | INFO     | did not find any defunct processes belonging to 1589570
[2025-10-25 21:32:21] 2025-10-25 19:27:37,387 | INFO     | ready for new job
[2025-10-25 21:32:21] 2025-10-25 19:27:37,388 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 21:32:21] 2025-10-25 19:27:37,399 | INFO     | ***************************************
[2025-10-25 21:32:21] 2025-10-25 19:27:37,399 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 21:32:21] 2025-10-25 19:27:37,399 | INFO     | ***************************************
[2025-10-25 21:32:21] 2025-10-25 19:27:37,399 | INFO     | 
[2025-10-25 21:32:21] 2025-10-25 19:27:37,409 | INFO     | architecture information:
[2025-10-25 21:32:21] 2025-10-25 19:27:37,417 | INFO     | executing command: cat /etc/os-release
[2025-10-25 21:32:21] 2025-10-25 19:27:37,568 | INFO     | cat /etc/os-release:
[2025-10-25 21:32:21] NAME="CentOS Linux"
[2025-10-25 21:32:21] VERSION="7 (Core)"
[2025-10-25 21:32:21] ID="centos"
[2025-10-25 21:32:21] ID_LIKE="rhel fedora"
[2025-10-25 21:32:21] VERSION_ID="7"
[2025-10-25 21:32:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 21:32:21] ANSI_COLOR="0;31"
[2025-10-25 21:32:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 21:32:21] HOME_URL="https://www.centos.org/"
[2025-10-25 21:32:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 21:32:21] 
[2025-10-25 21:32:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 21:32:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 21:32:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 21:32:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 21:32:21] 
[2025-10-25 21:32:21] 2025-10-25 19:27:37,569 | INFO     | ***************************************
[2025-10-25 21:32:21] 2025-10-25 19:27:38,072 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-10-25 21:32:21] 2025-10-25 19:27:38,167 | INFO     | sufficient remaining disk space (1673656270848 B)
[2025-10-25 21:32:21] 2025-10-25 19:27:38,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 21:32:21] 2025-10-25 19:27:38,168 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 21:32:21] 2025-10-25 19:27:38,168 | INFO     | update_server=False
[2025-10-25 21:32:21] 2025-10-25 19:27:38,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 21:32:21] 2025-10-25 19:27:38,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 21:32:21] 2025-10-25 19:27:38,176 | INFO     | aborting loop
[2025-10-25 21:32:21] 2025-10-25 19:27:38,333 | INFO     | all data control threads have been joined
[2025-10-25 21:32:21] 2025-10-25 19:27:38,702 | INFO     | all payload control threads have been joined
[2025-10-25 21:32:21] 2025-10-25 19:27:38,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 21:32:21] 2025-10-25 19:27:38,962 | INFO     | all job control threads have been joined
[2025-10-25 21:32:21] 2025-10-25 19:27:39,173 | INFO     | [job] retrieve thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:39,181 | INFO     | [job] job monitor thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:39,301 | INFO     | [payload] validate_post thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:39,341 | INFO     | [data] control thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:39,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 21:32:21] 2025-10-25 19:27:39,554 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:39,708 | INFO     | [payload] control thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:39,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 21:32:21] 2025-10-25 19:27:39,929 | INFO     | [job] queue monitor thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:39,970 | INFO     | [job] control thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:40,284 | INFO     | [job] validate thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:40,336 | INFO     | [data] copytool_in thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:40,389 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:40,530 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:40,752 | INFO     | [payload] failed_post thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:41,508 | INFO     | [data] copytool_out thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:43,929 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:27:48,470 | INFO     | job.realtimelogging is not enabled
[2025-10-25 21:32:21] 2025-10-25 19:27:49,476 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 21:32:21] 2025-10-25 19:28:09,328 | INFO     | PID=1556406 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-25 21:32:21] 2025-10-25 19:28:09,328 | INFO     | .. there are 86 such processes running
[2025-10-25 21:32:21] 2025-10-25 19:28:09,328 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 21:32:21] 2025-10-25 19:28:09,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 21:32:21] 2025-10-25 19:28:09,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 21:32:21] 2025-10-25 19:28:18,549 | INFO     | [monitor] cgroup control has ended
[2025-10-25 21:32:21] 2025-10-25 19:28:19,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139684273633088)>', '<ExcThread(monitor, started 139683266815744)>']
[2025-10-25 21:32:21] 2025-10-25 19:28:20,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 21:32:21] 2025-10-25 19:28:20,396 | INFO     | [monitor] control thread has ended
[2025-10-25 21:32:21] 2025-10-25 19:28:24,583 | INFO     | all workflow threads have been joined
[2025-10-25 21:32:21] 2025-10-25 19:28:24,584 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 21:32:21] 2025-10-25 19:28:24,584 | INFO     | traces error code: 0
[2025-10-25 21:32:21] 2025-10-25 19:28:24,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 21:32:21] 2025-10-25 19:28:24,940 [wrapper] ==== pilot stdout END ====
[2025-10-25 21:32:21] 2025-10-25 19:28:24,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 21:32:21] 2025-10-25 19:28:25,004 [wrapper] pilotpid: 1556406
[2025-10-25 21:32:21] 2025-10-25 19:28:25,039 [wrapper] Pilot exit status: 0
[2025-10-25 21:32:21] 2025-10-25 19:28:25,181 [wrapper] pandaids: 6856223833
[2025-10-25 21:32:21] 2025-10-25 19:28:25,639 [wrapper] cleanup supervisor_pilot 2213695 1556407
[2025-10-25 21:32:21] 2025-10-25 19:28:25,670 [wrapper] Test setup, not cleaning
[2025-10-25 21:32:21] 2025-10-25 19:28:25,719 [wrapper] apfmon messages muted
[2025-10-25 21:32:21] 2025-10-25 19:28:25,738 [wrapper] ==== wrapper stdout END ====
[2025-10-25 21:32:21] 2025-10-25 19:28:25,785 [wrapper] ==== wrapper stderr END ====
[2025-10-25 21:32:21]  *** Error codes and diagnostics ***
[2025-10-25 21:32:21]     "exeErrorCode": 0,
[2025-10-25 21:32:21]     "exeErrorDiag": "",
[2025-10-25 21:32:21]     "pilotErrorCode": 0,
[2025-10-25 21:32:21]     "pilotErrorDiag": "",
[2025-10-25 21:32:21]  *** Listing of results directory ***
[2025-10-25 21:32:21] total 438884
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc    557409 Oct 25 01:40 pilot3.tar.gz
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc      5112 Oct 25 02:33 queuedata.json
[2025-10-25 21:32:21] -rwx------ 1 boinc boinc     36292 Oct 25 02:35 runpilot2-wrapper.sh
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc       100 Oct 25 19:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 21:32:21] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 19:09 run_atlas
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc       105 Oct 25 19:09 job.xml
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc      6665 Oct 25 19:09 init_data.xml
[2025-10-25 21:32:21] -rw-r--r-- 2 boinc boinc 232182615 Oct 25 19:09 EVNT.46771634._005113.pool.root.1
[2025-10-25 21:32:21] -rw-r--r-- 2 boinc boinc     15120 Oct 25 19:09 start_atlas.sh
[2025-10-25 21:32:21] drwxrwx--x 2 boinc boinc      4096 Oct 25 19:09 shared
[2025-10-25 21:32:21] -rw-r--r-- 2 boinc boinc    569690 Oct 25 19:09 input.tar.gz
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc         0 Oct 25 19:09 boinc_lockfile
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc      2562 Oct 25 19:09 pandaJob.out
[2025-10-25 21:32:21] -rw------- 1 boinc boinc    978597 Oct 25 19:11 agis_schedconf.cvmfs.json
[2025-10-25 21:32:21] -rw------- 1 boinc boinc   1560772 Oct 25 19:11 agis_ddmendpoints.agis.ALL.json
[2025-10-25 21:32:21] drwx------ 5 boinc boinc      4096 Oct 25 19:11 pilot3
[2025-10-25 21:32:21] -rw------- 1 boinc boinc 210296701 Oct 25 21:25 HITS.46771637._128220.pool.root.1
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc       529 Oct 25 21:25 boinc_task_state.xml
[2025-10-25 21:32:21] -rw------- 1 boinc boinc      1021 Oct 25 21:26 memory_monitor_summary.json
[2025-10-25 21:32:21] -rw------- 1 boinc boinc    421060 Oct 25 21:26 log.46771637._128220.job.log.tgz.1
[2025-10-25 21:32:21] -rw------- 1 boinc boinc      7783 Oct 25 21:27 heartbeat.json
[2025-10-25 21:32:21] -rw------- 1 boinc boinc        95 Oct 25 21:27 pilot_heartbeat.json
[2025-10-25 21:32:21] -rw------- 1 boinc boinc      4899 Oct 25 21:28 pilotlog.txt
[2025-10-25 21:32:21] -rw------- 1 boinc boinc   1096767 Oct 25 21:28 log.46771637._128220.job.log.1
[2025-10-25 21:32:21] -rw------- 1 boinc boinc       357 Oct 25 21:28 output.list
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc       620 Oct 25 21:28 runtime_log
[2025-10-25 21:32:21] -rw------- 1 boinc boinc   1536000 Oct 25 21:28 result.tar.gz
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc      8764 Oct 25 21:28 runtime_log.err
[2025-10-25 21:32:21] -rw------- 1 boinc boinc       664 Oct 25 21:28 07LNDmxQhW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8YDODmFefOXn.diag
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc        26 Oct 25 21:32 wrapper_checkpoint.txt
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc      8192 Oct 25 21:32 boinc_mmap_file
[2025-10-25 21:32:21] -rw-r--r-- 1 boinc boinc     21212 Oct 25 21:32 stderr.txt
[2025-10-25 21:32:21] HITS file was successfully produced:
[2025-10-25 21:32:21] -rw------- 1 boinc boinc 210296701 Oct 25 21:25 shared/HITS.pool.root.1
[2025-10-25 21:32:21]  *** Contents of shared directory: ***
[2025-10-25 21:32:21] total 434196
[2025-10-25 21:32:21] -rw-r--r-- 2 boinc boinc 232182615 Oct 25 19:09 ATLAS.root_0
[2025-10-25 21:32:21] -rw-r--r-- 2 boinc boinc     15120 Oct 25 19:09 start_atlas.sh
[2025-10-25 21:32:21] -rw-r--r-- 2 boinc boinc    569690 Oct 25 19:09 input.tar.gz
[2025-10-25 21:32:21] -rw------- 1 boinc boinc 210296701 Oct 25 21:25 HITS.pool.root.1
[2025-10-25 21:32:21] -rw------- 1 boinc boinc   1536000 Oct 25 21:28 result.tar.gz
21:32:23 (1545975): run_atlas exited; CPU time 43880.258972
21:32:23 (1545975): called boinc_finish(0)

</stderr_txt>
]]>

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