Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
03:21:47 (480105): wrapper (7.7.26015): starting
03:21:47 (480105): wrapper: running run_atlas (--nthreads 8)
[2025-10-25 03:21:47] Arguments: --nthreads 8
[2025-10-25 03:21:47] Threads: 8
[2025-10-25 03:21:47] Checking for CVMFS
[2025-10-25 03:21:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 03:21:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 03:21:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 03:21:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 03:21:48] 2.13.2.0 5454 305 50540 152115 3 185 2260931 4096001 3664 130560 0 1079699 99.997 13392 1225 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-25 03:21:48] CVMFS is ok
[2025-10-25 03:21:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 03:21:48] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-25 03:21:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-25 03:21:48] Further information can be found at the LHC@home message board.
[2025-10-25 03:21:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 03:21:48] Checking for apptainer binary...
[2025-10-25 03:21:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 03:21:48] Running /usr/bin/apptainer --version
[2025-10-25 03:21:48] apptainer version 1.4.2
[2025-10-25 03:21:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 03:21:48] 3950x-linux
[2025-10-25 03:21:48] apptainer works
[2025-10-25 03:21:48] Set ATHENA_PROC_NUMBER=8
[2025-10-25 03:21:48] Set ATHENA_CORE_NUMBER=8
[2025-10-25 03:21:48] Starting ATLAS job with PandaID=6856349206
[2025-10-25 03:21:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc202/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 05:03:14]  *** The last 200 lines of the pilot log: ***
[2025-10-25 05:03:14]  scope=mc23_13p6TeV
[2025-10-25 05:03:14]  status=None
[2025-10-25 05:03:14]  status_code=0
[2025-10-25 05:03:14]  storage_token=
[2025-10-25 05:03:14]  surl=/var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856349206/log.46771637._129270.job.log.tgz.1
[2025-10-25 05:03:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/27/log.46771637._129270.job.log.tgz.1
[2025-10-25 05:03:14]  workdir=None
[2025-10-25 05:03:14] ]
[2025-10-25 05:03:14] 2025-10-25 12:02:17,667 | INFO     | transferring file log.46771637._129270.job.log.tgz.1 from /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856349206/log.46771637._129270.job.log.tgz.1 to /var/li
[2025-10-25 05:03:14] 2025-10-25 12:02:17,667 | INFO     | executing command: /usr/bin/env mv /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856349206/log.46771637._129270.job.log.tgz.1 /var/lib/multiboinc/boinc202/slot
[2025-10-25 05:03:14] 2025-10-25 12:02:17,685 | INFO     | adding to output.list: log.46771637._129270.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/27/log.46771637._129270.job.log.tg
[2025-10-25 05:03:14] 2025-10-25 12:02:17,686 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-25 05:03:14] 2025-10-25 12:02:17,686 | INFO     | summary of transferred files:
[2025-10-25 05:03:14] 2025-10-25 12:02:17,686 | INFO     |  -- lfn=log.46771637._129270.job.log.tgz.1, status_code=0, status=transferred
[2025-10-25 05:03:14] 2025-10-25 12:02:17,686 | INFO     | stage-out finished correctly
[2025-10-25 05:03:14] 2025-10-25 12:02:17,815 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-25 05:03:14] 2025-10-25 12:02:18,063 | INFO     | time since job start (6019s) is within the limit (172800.0s)
[2025-10-25 05:03:14] 2025-10-25 12:02:18,147 | INFO     | job 6856349206 has state=finished
[2025-10-25 05:03:14] 2025-10-25 12:02:18,147 | INFO     | preparing for final server update for job 6856349206 in state='finished'
[2025-10-25 05:03:14] 2025-10-25 12:02:18,147 | INFO     | this job has now completed (state=finished)
[2025-10-25 05:03:14] 2025-10-25 12:02:18,148 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-25 05:03:14] 2025-10-25 12:02:18,148 | INFO     | log transfer has been attempted: DONE
[2025-10-25 05:03:14] 2025-10-25 12:02:18,148 | INFO     | job 6856349206 has finished - writing final server update
[2025-10-25 05:03:14] 2025-10-25 12:02:18,148 | INFO     | total number of processed events: 400 (read)
[2025-10-25 05:03:14] 2025-10-25 12:02:18,149 | INFO     | executing command: lscpu
[2025-10-25 05:03:14] 2025-10-25 12:02:18,182 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-25 05:03:14] 2025-10-25 12:02:20,067 | INFO     | time since job start (6021s) is within the limit (172800.0s)
[2025-10-25 05:03:14] 2025-10-25 12:02:22,073 | INFO     | time since job start (6023s) is within the limit (172800.0s)
[2025-10-25 05:03:14] 2025-10-25 12:02:22,364 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-25 05:03:14] 2025-10-25 12:02:22,368 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3070.0064687500007
[2025-10-25 05:03:14] 2025-10-25 12:02:22,373 | INFO     | using path: /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856349206/memory_monitor_summary.json (trf name=prmon)
[2025-10-25 05:03:14] 2025-10-25 12:02:22,374 | INFO     | extracted standard info from prmon json
[2025-10-25 05:03:14] 2025-10-25 12:02:22,374 | INFO     | extracted standard memory fields from prmon json
[2025-10-25 05:03:14] 2025-10-25 12:02:22,374 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-25 05:03:14] 2025-10-25 12:02:22,374 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-25 05:03:14] 2025-10-25 12:02:22,374 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-25 05:03:14] 2025-10-25 12:02:22,376 | INFO     | fitting pss+swap vs Time
[2025-10-25 05:03:14] 2025-10-25 12:02:22,376 | INFO     | sum of square deviations: 241429643.0
[2025-10-25 05:03:14] 2025-10-25 12:02:22,377 | INFO     | sum of deviations: -3941951393.9999995
[2025-10-25 05:03:14] 2025-10-25 12:02:22,377 | INFO     | mean x: 1761390823.5
[2025-10-25 05:03:14] 2025-10-25 12:02:22,377 | INFO     | mean y: 2534338.5217391304
[2025-10-25 05:03:14] 2025-10-25 12:02:22,377 | INFO     | -- intersect: 28761707925.48112
[2025-10-25 05:03:14] 2025-10-25 12:02:22,377 | INFO     | intersect: 28761707925.48112
[2025-10-25 05:03:14] 2025-10-25 12:02:22,377 | INFO     | chi2: 0.007715855466169847
[2025-10-25 05:03:14] 2025-10-25 12:02:22,377 | INFO     | -- intersect: 28761707925.48112
[2025-10-25 05:03:14] 2025-10-25 12:02:22,377 | INFO     | current memory leak: -16.33 B/s (using 92 data points, chi2=0.01)
[2025-10-25 05:03:14] 2025-10-25 12:02:22,378 | INFO     | could have reported an average CPU frequency of 3172 MHz (7 samples)
[2025-10-25 05:03:14] 2025-10-25 12:02:22,378 | INFO     | ..............................
[2025-10-25 05:03:14] 2025-10-25 12:02:22,378 | INFO     | . Timing measurements:
[2025-10-25 05:03:14] 2025-10-25 12:02:22,378 | INFO     | . get job = 0 s
[2025-10-25 05:03:14] 2025-10-25 12:02:22,378 | INFO     | . initial setup = 3 s
[2025-10-25 05:03:14] 2025-10-25 12:02:22,378 | INFO     | . payload setup = 4 s
[2025-10-25 05:03:14] 2025-10-25 12:02:22,378 | INFO     | . stage-in = 0 s
[2025-10-25 05:03:14] 2025-10-25 12:02:22,378 | INFO     | . payload execution = 5994 s
[2025-10-25 05:03:14] 2025-10-25 12:02:22,378 | INFO     | . stage-out = 0 s
[2025-10-25 05:03:14] 2025-10-25 12:02:22,378 | INFO     | . log creation = 0 s
[2025-10-25 05:03:14] 2025-10-25 12:02:22,378 | INFO     | ..............................
[2025-10-25 05:03:14] 2025-10-25 12:02:22,457 | INFO     | 
[2025-10-25 05:03:14] 2025-10-25 12:02:22,457 | INFO     | job summary report
[2025-10-25 05:03:14] 2025-10-25 12:02:22,457 | INFO     | --------------------------------------------------
[2025-10-25 05:03:14] 2025-10-25 12:02:22,457 | INFO     | PanDA job id: 6856349206
[2025-10-25 05:03:14] 2025-10-25 12:02:22,457 | INFO     | task id: 46771637
[2025-10-25 05:03:14] 2025-10-25 12:02:22,457 | INFO     | errors: (none)
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | pilot state: finished 
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | transexitcode: 0
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | exeerrorcode: 0
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | exeerrordiag: 
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | exitcode: 0
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | exitmsg: OK
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | cpuconsumptiontime: 37664 s
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | nevents: 400
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | neventsw: 0
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | pid: 490593
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | pgrp: 490593
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | corecount: 8
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | event service: False
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | sizes: {0: 2348835, 1: 2348977, 4: 2349239, 11: 2349267, 6003: 2376144, 6004: 2385354, 6008: 2385492}
[2025-10-25 05:03:14] 2025-10-25 12:02:22,458 | INFO     | --------------------------------------------------
[2025-10-25 05:03:14] 2025-10-25 12:02:22,459 | INFO     | 
[2025-10-25 05:03:14] 2025-10-25 12:02:22,459 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc202/slots/1
[2025-10-25 05:03:14] 2025-10-25 12:02:22,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,479 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 05:03:14] 2025-10-25 12:02:22,480 | INFO     | job 6856349206 has completed (purged errors)
[2025-10-25 05:03:14] 2025-10-25 12:02:22,480 | INFO     | overall cleanup function is called
[2025-10-25 05:03:14] 2025-10-25 12:02:23,315 | INFO     | PID=483943 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-25 05:03:14] 2025-10-25 12:02:23,315 | INFO     | .. there are 5 such processes running
[2025-10-25 05:03:14] 2025-10-25 12:02:23,466 | WARNING  | process 490593 can no longer be monitored (due to stat problems) - aborting
[2025-10-25 05:03:14] 2025-10-25 12:02:23,487 | INFO     | --- collectZombieJob: --- 10, [490593]
[2025-10-25 05:03:14] 2025-10-25 12:02:23,488 | INFO     | zombie collector waiting for pid 490593
[2025-10-25 05:03:14] 2025-10-25 12:02:23,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 05:03:14] 2025-10-25 12:02:23,488 | INFO     | collected zombie processes
[2025-10-25 05:03:14] 2025-10-25 12:02:23,488 | INFO     | will attempt to kill all subprocesses of pid=490593
[2025-10-25 05:03:14] 2025-10-25 12:02:23,705 | INFO     | using path: /var/lib/multiboinc/boinc202/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-10-25 05:03:14] 2025-10-25 12:02:23,924 | INFO     | process IDs to be killed: [490593] (in reverse order)
[2025-10-25 05:03:14] 2025-10-25 12:02:23,991 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 05:03:14] 2025-10-25 12:02:23,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 05:03:14] 2025-10-25 12:02:24,004 | INFO     | did not find any defunct processes belonging to 490593
[2025-10-25 05:03:14] 2025-10-25 12:02:24,012 | INFO     | number of running child processes to parent process 490593: 1
[2025-10-25 05:03:14] 2025-10-25 12:02:24,012 | INFO     | maximum number of monitored processes: 6
[2025-10-25 05:03:14] 2025-10-25 12:02:24,012 | INFO     | aborting job monitoring since job object (job id=6856349206) has expired
[2025-10-25 05:03:14] 2025-10-25 12:02:24,014 | INFO     | did not find any defunct processes belonging to 490593
[2025-10-25 05:03:14] 2025-10-25 12:02:24,015 | INFO     | ready for new job
[2025-10-25 05:03:14] 2025-10-25 12:02:24,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 05:03:14] 2025-10-25 12:02:24,016 | INFO     | ***************************************
[2025-10-25 05:03:14] 2025-10-25 12:02:24,016 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 05:03:14] 2025-10-25 12:02:24,016 | INFO     | ***************************************
[2025-10-25 05:03:14] 2025-10-25 12:02:24,016 | INFO     | 
[2025-10-25 05:03:14] 2025-10-25 12:02:24,018 | INFO     | architecture information:
[2025-10-25 05:03:14] 2025-10-25 12:02:24,019 | INFO     | executing command: cat /etc/os-release
[2025-10-25 05:03:14] 2025-10-25 12:02:24,033 | INFO     | cat /etc/os-release:
[2025-10-25 05:03:14] NAME="CentOS Linux"
[2025-10-25 05:03:14] VERSION="7 (Core)"
[2025-10-25 05:03:14] ID="centos"
[2025-10-25 05:03:14] ID_LIKE="rhel fedora"
[2025-10-25 05:03:14] VERSION_ID="7"
[2025-10-25 05:03:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 05:03:14] ANSI_COLOR="0;31"
[2025-10-25 05:03:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 05:03:14] HOME_URL="https://www.centos.org/"
[2025-10-25 05:03:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 05:03:14] 
[2025-10-25 05:03:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 05:03:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 05:03:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 05:03:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 05:03:14] 
[2025-10-25 05:03:14] 2025-10-25 12:02:24,033 | INFO     | ***************************************
[2025-10-25 05:03:14] 2025-10-25 12:02:24,536 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc202/slots/1
[2025-10-25 05:03:14] 2025-10-25 12:02:24,551 | INFO     | sufficient remaining disk space (192524845056 B)
[2025-10-25 05:03:14] 2025-10-25 12:02:24,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 05:03:14] 2025-10-25 12:02:24,552 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 05:03:14] 2025-10-25 12:02:24,552 | INFO     | update_server=False
[2025-10-25 05:03:14] 2025-10-25 12:02:24,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 05:03:14] 2025-10-25 12:02:24,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 05:03:14] 2025-10-25 12:02:24,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 05:03:14] 2025-10-25 12:02:24,553 | INFO     | will abort loop
[2025-10-25 05:03:14] 2025-10-25 12:02:24,722 | INFO     | all job control threads have been joined
[2025-10-25 05:03:14] 2025-10-25 12:02:25,044 | INFO     | all payload control threads have been joined
[2025-10-25 05:03:14] 2025-10-25 12:02:25,184 | INFO     | all data control threads have been joined
[2025-10-25 05:03:14] 2025-10-25 12:02:25,557 | INFO     | [job] retrieve thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:25,558 | INFO     | [job] job monitor thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:25,727 | INFO     | [job] control thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:25,775 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 05:03:14] 2025-10-25 12:02:25,799 | INFO     | [data] copytool_in thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:26,049 | INFO     | [payload] control thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:26,105 | INFO     | [payload] validate_post thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:26,189 | INFO     | [data] control thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:26,209 | INFO     | [job] validate thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:26,411 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:26,575 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:26,632 | INFO     | [payload] failed_post thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:27,020 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:27,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 05:03:14] 2025-10-25 12:02:27,780 | INFO     | [data] copytool_out thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:28,472 | INFO     | [job] queue monitor thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:28,558 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:35,552 | INFO     | job.realtimelogging is not enabled
[2025-10-25 05:03:14] 2025-10-25 12:02:36,557 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 05:03:14] 2025-10-25 12:02:55,568 | INFO     | PID=483943 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-25 05:03:14] 2025-10-25 12:02:55,569 | INFO     | .. there are 5 such processes running
[2025-10-25 05:03:14] 2025-10-25 12:02:55,569 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 05:03:14] 2025-10-25 12:02:55,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 05:03:14] 2025-10-25 12:02:55,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 05:03:14] 2025-10-25 12:03:08,737 | INFO     | [monitor] cgroup control has ended
[2025-10-25 05:03:14] 2025-10-25 12:03:09,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134905398470464)>', '<ExcThread(monitor, started 134904763369216)>']
[2025-10-25 05:03:14] 2025-10-25 12:03:09,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 05:03:14] 2025-10-25 12:03:09,635 | INFO     | [monitor] control thread has ended
[2025-10-25 05:03:14] 2025-10-25 12:03:14,243 | INFO     | all workflow threads have been joined
[2025-10-25 05:03:14] 2025-10-25 12:03:14,244 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 05:03:14] 2025-10-25 12:03:14,244 | INFO     | traces error code: 0
[2025-10-25 05:03:14] 2025-10-25 12:03:14,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 05:03:14] 2025-10-25 12:03:14,333 [wrapper] ==== pilot stdout END ====
[2025-10-25 05:03:14] 2025-10-25 12:03:14,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 05:03:14] 2025-10-25 12:03:14,339 [wrapper] pilotpid: 483943
[2025-10-25 05:03:14] 2025-10-25 12:03:14,342 [wrapper] Pilot exit status: 0
[2025-10-25 05:03:14] 2025-10-25 12:03:14,352 [wrapper] pandaids: 6856349206
[2025-10-25 05:03:14] 2025-10-25 12:03:14,395 [wrapper] cleanup supervisor_pilot  603951 483944
[2025-10-25 05:03:14] 2025-10-25 12:03:14,398 [wrapper] Test setup, not cleaning
[2025-10-25 05:03:14] 2025-10-25 12:03:14,400 [wrapper] apfmon messages muted
[2025-10-25 05:03:14] 2025-10-25 12:03:14,403 [wrapper] ==== wrapper stdout END ====
[2025-10-25 05:03:14] 2025-10-25 12:03:14,406 [wrapper] ==== wrapper stderr END ====
[2025-10-25 05:03:14]  *** Error codes and diagnostics ***
[2025-10-25 05:03:14]     "exeErrorCode": 0,
[2025-10-25 05:03:14]     "exeErrorDiag": "",
[2025-10-25 05:03:14]     "pilotErrorCode": 0,
[2025-10-25 05:03:14]     "pilotErrorDiag": "",
[2025-10-25 05:03:14]  *** Listing of results directory ***
[2025-10-25 05:03:14] total 426804
[2025-10-25 05:03:14] -rw-r--r-- 1 root root    557409 Oct 24 18:37 pilot3.tar.gz
[2025-10-25 05:03:14] -rwx------ 1 4871 1028     36292 Oct 24 19:33 runpilot2-wrapper.sh
[2025-10-25 05:03:14] -rw-r--r-- 1 root root      5112 Oct 24 19:33 queuedata.json
[2025-10-25 05:03:14] -rw-r--r-- 1 root root       100 Oct 25 03:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 05:03:14] -rwxr-xr-x 1 root root      7986 Oct 25 03:21 run_atlas
[2025-10-25 05:03:14] -rw-r--r-- 1 root root       105 Oct 25 03:21 job.xml
[2025-10-25 05:03:14] -rw-r--r-- 2 root root 229902956 Oct 25 03:21 EVNT.46771634._005150.pool.root.1
[2025-10-25 05:03:14] -rw-r--r-- 2 root root    569685 Oct 25 03:21 input.tar.gz
[2025-10-25 05:03:14] -rw-r--r-- 2 root root     15120 Oct 25 03:21 start_atlas.sh
[2025-10-25 05:03:14] drwxrwx--x 2 root root      4096 Oct 25 03:21 shared
[2025-10-25 05:03:14] -rw-r--r-- 1 root root         0 Oct 25 03:21 boinc_setup_complete
[2025-10-25 05:03:14] -rw-r--r-- 1 root root      7437 Oct 25 03:21 init_data.xml
[2025-10-25 05:03:14] -rw-r--r-- 1 root root         0 Oct 25 03:21 boinc_lockfile
[2025-10-25 05:03:14] -rw-r--r-- 1 root root      2562 Oct 25 03:21 pandaJob.out
[2025-10-25 05:03:14] -rw------- 1 root root    978296 Oct 25 03:21 agis_schedconf.cvmfs.json
[2025-10-25 05:03:14] -rw------- 1 root root   1560772 Oct 25 03:21 agis_ddmendpoints.agis.ALL.json
[2025-10-25 05:03:14] drwxr-xr-x 5  320  320      4096 Oct 25 03:21 pilot3
[2025-10-25 05:03:14] -rw------- 1 root root 200763353 Oct 25 05:01 HITS.46771637._129270.pool.root.1
[2025-10-25 05:03:14] -rw------- 1 root root      1022 Oct 25 05:02 memory_monitor_summary.json
[2025-10-25 05:03:14] -rw-r--r-- 1 root root       529 Oct 25 05:02 boinc_task_state.xml
[2025-10-25 05:03:14] -rw------- 1 root root    350804 Oct 25 05:02 log.46771637._129270.job.log.tgz.1
[2025-10-25 05:03:14] -rw------- 1 root root      7749 Oct 25 05:02 heartbeat.json
[2025-10-25 05:03:14] -rw-r--r-- 1 root root      8192 Oct 25 05:02 boinc_mmap_file
[2025-10-25 05:03:14] -rw-r--r-- 1 root root        27 Oct 25 05:02 wrapper_checkpoint.txt
[2025-10-25 05:03:14] -rw------- 1 root root        95 Oct 25 05:02 pilot_heartbeat.json
[2025-10-25 05:03:14] -rw------- 1 root root      4911 Oct 25 05:03 pilotlog.txt
[2025-10-25 05:03:14] -rw------- 1 root root    884411 Oct 25 05:03 log.46771637._129270.job.log.1
[2025-10-25 05:03:14] -rw------- 1 root root       357 Oct 25 05:03 output.list
[2025-10-25 05:03:14] -rw-r--r-- 1 root root       620 Oct 25 05:03 runtime_log
[2025-10-25 05:03:14] -rw------- 1 root root   1259520 Oct 25 05:03 result.tar.gz
[2025-10-25 05:03:14] -rw-r--r-- 1 root root      8876 Oct 25 05:03 runtime_log.err
[2025-10-25 05:03:14] -rw------- 1 root root       649 Oct 25 05:03 4ZXMDmDHjW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDpDODmnsAo6n.diag
[2025-10-25 05:03:14] -rw-r--r-- 1 root root     22086 Oct 25 05:03 stderr.txt
[2025-10-25 05:03:14] HITS file was successfully produced:
[2025-10-25 05:03:14] -rw------- 1 root root 200763353 Oct 25 05:01 shared/HITS.pool.root.1
[2025-10-25 05:03:14]  *** Contents of shared directory: ***
[2025-10-25 05:03:14] total 422392
[2025-10-25 05:03:14] -rw-r--r-- 2 root root 229902956 Oct 25 03:21 ATLAS.root_0
[2025-10-25 05:03:14] -rw-r--r-- 2 root root    569685 Oct 25 03:21 input.tar.gz
[2025-10-25 05:03:14] -rw-r--r-- 2 root root     15120 Oct 25 03:21 start_atlas.sh
[2025-10-25 05:03:14] -rw------- 1 root root 200763353 Oct 25 05:01 HITS.pool.root.1
[2025-10-25 05:03:14] -rw------- 1 root root   1259520 Oct 25 05:03 result.tar.gz
05:03:15 (480105): run_atlas exited; CPU time 37739.955478
05:03:15 (480105): called boinc_finish(0)

</stderr_txt>
]]>

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