Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:26:33 (521705): wrapper (7.7.26015): starting
21:26:33 (521705): wrapper: running run_atlas (--nthreads 4)
[2025-10-25 21:26:33] Arguments: --nthreads 4
[2025-10-25 21:26:33] Threads: 4
[2025-10-25 21:26:33] Checking for CVMFS
[2025-10-25 21:26:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 21:26:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 21:26:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 21:26:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 21:26:34] 2.9.2.0 2150638 7036 96180 152128 1 57 25074124 36864000 0 130560 0 6729037 99.992 262187 1133 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-25 21:26:34] CVMFS is ok
[2025-10-25 21:26:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 21:26:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 21:26:34] Further information can be found at the LHC@home message board.
[2025-10-25 21:26:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 21:26:34] Checking for apptainer binary...
[2025-10-25 21:26:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 21:26:34] Running /usr/bin/apptainer --version
[2025-10-25 21:26:34] apptainer version 1.4.1-1.1
[2025-10-25 21:26:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 21:26:34] thA315b
[2025-10-25 21:26:34] apptainer works
[2025-10-25 21:26:34] Set ATHENA_PROC_NUMBER=4
[2025-10-25 21:26:34] Set ATHENA_CORE_NUMBER=4
[2025-10-25 21:26:34] Starting ATLAS job with PandaID=6856333664
[2025-10-25 21:26:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 22:35:59]  *** The last 200 lines of the pilot log: ***
[2025-10-25 22:35:59] 2025-10-25 20:35:27,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 22:35:59] 2025-10-25 20:35:27,878 | INFO     | did not find any defunct processes belonging to 532048
[2025-10-25 22:35:59] 2025-10-25 20:35:27,880 | INFO     | did not find any defunct processes belonging to 532048
[2025-10-25 22:35:59] 2025-10-25 20:35:27,880 | INFO     | ready for new job
[2025-10-25 22:35:59] 2025-10-25 20:35:27,880 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 22:35:59] 2025-10-25 20:35:27,880 | INFO     | ***************************************
[2025-10-25 22:35:59] 2025-10-25 20:35:27,880 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 22:35:59] 2025-10-25 20:35:27,880 | INFO     | ***************************************
[2025-10-25 22:35:59] 2025-10-25 20:35:27,880 | INFO     | 
[2025-10-25 22:35:59] 2025-10-25 20:35:27,881 | INFO     | architecture information:
[2025-10-25 22:35:59] 2025-10-25 20:35:27,881 | INFO     | executing command: cat /etc/os-release
[2025-10-25 22:35:59] 2025-10-25 20:35:27,890 | INFO     | cat /etc/os-release:
[2025-10-25 22:35:59] NAME="CentOS Linux"
[2025-10-25 22:35:59] VERSION="7 (Core)"
[2025-10-25 22:35:59] ID="centos"
[2025-10-25 22:35:59] ID_LIKE="rhel fedora"
[2025-10-25 22:35:59] VERSION_ID="7"
[2025-10-25 22:35:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 22:35:59] ANSI_COLOR="0;31"
[2025-10-25 22:35:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 22:35:59] HOME_URL="https://www.centos.org/"
[2025-10-25 22:35:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 22:35:59] 
[2025-10-25 22:35:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 22:35:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 22:35:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 22:35:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 22:35:59] 
[2025-10-25 22:35:59] 2025-10-25 20:35:27,891 | INFO     | ***************************************
[2025-10-25 22:35:59] 2025-10-25 20:35:28,394 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-25 22:35:59] 2025-10-25 20:35:28,408 | INFO     | sufficient remaining disk space (335313633280 B)
[2025-10-25 22:35:59] 2025-10-25 20:35:28,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 22:35:59] 2025-10-25 20:35:28,408 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 22:35:59] 2025-10-25 20:35:28,408 | INFO     | update_server=False
[2025-10-25 22:35:59] 2025-10-25 20:35:28,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 22:35:59] 2025-10-25 20:35:28,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 22:35:59] 2025-10-25 20:35:28,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 22:35:59] 2025-10-25 20:35:28,513 | INFO     | aborting loop
[2025-10-25 22:35:59] 2025-10-25 20:35:28,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 22:35:59] 2025-10-25 20:35:28,552 | INFO     | all data control threads have been joined
[2025-10-25 22:35:59] 2025-10-25 20:35:28,990 | INFO     | all payload control threads have been joined
[2025-10-25 22:35:59] 2025-10-25 20:35:29,105 | INFO     | all job control threads have been joined
[2025-10-25 22:35:59] 2025-10-25 20:35:29,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 22:35:59] 2025-10-25 20:35:29,414 | INFO     | [job] retrieve thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:29,414 | INFO     | [job] queue monitor thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:29,518 | INFO     | [job] job monitor thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:29,557 | INFO     | [data] control thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:29,679 | INFO     | [payload] validate_post thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:29,996 | INFO     | [payload] control thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:30,111 | INFO     | [job] control thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:30,384 | INFO     | [data] copytool_in thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:30,529 | INFO     | [payload] failed_post thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:30,573 | INFO     | [job] validate thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:30,652 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:30,680 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:30,707 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:31,139 | INFO     | [data] copytool_out thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:32,543 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:39,413 | INFO     | job.realtimelogging is not enabled
[2025-10-25 22:35:59] 2025-10-25 20:35:40,419 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 22:35:59] 2025-10-25 20:35:45,403 | INFO     | [monitor] cgroup control has ended
[2025-10-25 22:35:59] 2025-10-25 20:35:46,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275143743296)>', '<ExcThread(monitor, started 140274437191424)>']
[2025-10-25 22:35:59] 2025-10-25 20:35:51,435 | INFO     | all workflow threads have been joined
[2025-10-25 22:35:59] 2025-10-25 20:35:51,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 22:35:59] 2025-10-25 20:35:51,435 | INFO     | traces error code: 0
[2025-10-25 22:35:59] 2025-10-25 20:35:51,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 22:35:59] 2025-10-25 20:35:59,409 | INFO     | PID=525489 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-25 22:35:59] 2025-10-25 20:35:59,409 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 22:35:59] 2025-10-25 20:35:59,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 22:35:59] 2025-10-25 20:35:59,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 22:35:59] 2025-10-25 20:35:59,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 22:35:59] 2025-10-25 20:35:59,409 | INFO     | [monitor] control thread has ended
[2025-10-25 22:35:59] 2025-10-25 20:35:59,460 [wrapper] ==== pilot stdout END ====
[2025-10-25 22:35:59] 2025-10-25 20:35:59,463 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 22:35:59] 2025-10-25 20:35:59,465 [wrapper] pilotpid: 525489
[2025-10-25 22:35:59] 2025-10-25 20:35:59,468 [wrapper] Pilot exit status: 0
[2025-10-25 22:35:59] 2025-10-25 20:35:59,476 [wrapper] pandaids: 6856333664
[2025-10-25 22:35:59] 2025-10-25 20:35:59,494 [wrapper] cleanup supervisor_pilot  541890 525490
[2025-10-25 22:35:59] 2025-10-25 20:35:59,497 [wrapper] Test setup, not cleaning
[2025-10-25 22:35:59] 2025-10-25 20:35:59,499 [wrapper] apfmon messages muted
[2025-10-25 22:35:59] 2025-10-25 20:35:59,502 [wrapper] ==== wrapper stdout END ====
[2025-10-25 22:35:59] 2025-10-25 20:35:59,504 [wrapper] ==== wrapper stderr END ====
[2025-10-25 22:35:59]  *** Error codes and diagnostics ***
[2025-10-25 22:35:59]     "exeErrorCode": 0,
[2025-10-25 22:35:59]     "exeErrorDiag": "",
[2025-10-25 22:35:59]     "pilotErrorCode": 0,
[2025-10-25 22:35:59]     "pilotErrorDiag": "",
[2025-10-25 22:35:59]  *** Listing of results directory ***
[2025-10-25 22:35:59] total 435864
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc    557409 Oct 25 03:37 pilot3.tar.gz
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc      5112 Oct 25 04:14 queuedata.json
[2025-10-25 22:35:59] -rwx------ 1 boinc boinc     36292 Oct 25 04:15 runpilot2-wrapper.sh
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc       100 Oct 25 21:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 22:35:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 21:26 run_atlas
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc       105 Oct 25 21:26 job.xml
[2025-10-25 22:35:59] -rw-r--r-- 2 boinc boinc 232311989 Oct 25 21:26 EVNT.46771634._005139.pool.root.1
[2025-10-25 22:35:59] -rw-r--r-- 2 boinc boinc    569691 Oct 25 21:26 input.tar.gz
[2025-10-25 22:35:59] -rw-r--r-- 2 boinc boinc     15120 Oct 25 21:26 start_atlas.sh
[2025-10-25 22:35:59] drwxrwx--x 2 boinc boinc      4096 Oct 25 21:26 shared
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc         0 Oct 25 21:26 boinc_setup_complete
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc      6443 Oct 25 21:26 init_data.xml
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc         0 Oct 25 21:26 boinc_lockfile
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc      2561 Oct 25 21:26 pandaJob.out
[2025-10-25 22:35:59] -rw------- 1 boinc boinc    978589 Oct 25 21:26 agis_schedconf.cvmfs.json
[2025-10-25 22:35:59] -rw------- 1 boinc boinc   1560772 Oct 25 21:26 agis_ddmendpoints.agis.ALL.json
[2025-10-25 22:35:59] drwx------ 5 boinc boinc      4096 Oct 25 21:26 pilot3
[2025-10-25 22:35:59] -rw------- 1 boinc boinc        95 Oct 25 22:35 pilot_heartbeat.json
[2025-10-25 22:35:59] -rw------- 1 boinc boinc 208375644 Oct 25 22:35 HITS.46771637._128983.pool.root.1
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc       529 Oct 25 22:35 boinc_task_state.xml
[2025-10-25 22:35:59] -rw------- 1 boinc boinc      1015 Oct 25 22:35 memory_monitor_summary.json
[2025-10-25 22:35:59] -rw------- 1 boinc boinc    260178 Oct 25 22:35 log.46771637._128983.job.log.tgz.1
[2025-10-25 22:35:59] -rw------- 1 boinc boinc      7753 Oct 25 22:35 heartbeat.json
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc        27 Oct 25 22:35 wrapper_checkpoint.txt
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc      8192 Oct 25 22:35 boinc_mmap_file
[2025-10-25 22:35:59] -rw------- 1 boinc boinc       746 Oct 25 22:35 pilotlog.txt
[2025-10-25 22:35:59] -rw------- 1 boinc boinc    614755 Oct 25 22:35 log.46771637._128983.job.log.1
[2025-10-25 22:35:59] -rw------- 1 boinc boinc       357 Oct 25 22:35 output.list
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc       620 Oct 25 22:35 runtime_log
[2025-10-25 22:35:59] -rw------- 1 boinc boinc    890880 Oct 25 22:35 result.tar.gz
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc      8782 Oct 25 22:35 runtime_log.err
[2025-10-25 22:35:59] -rw------- 1 boinc boinc       659 Oct 25 22:35 hqFKDmJziW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgmDODmHD31zn.diag
[2025-10-25 22:35:59] -rw-r--r-- 1 boinc boinc      9951 Oct 25 22:35 stderr.txt
[2025-10-25 22:35:59] HITS file was successfully produced:
[2025-10-25 22:35:59] -rw------- 1 boinc boinc 208375644 Oct 25 22:35 shared/HITS.pool.root.1
[2025-10-25 22:35:59]  *** Contents of shared directory: ***
[2025-10-25 22:35:59] total 431816
[2025-10-25 22:35:59] -rw-r--r-- 2 boinc boinc 232311989 Oct 25 21:26 ATLAS.root_0
[2025-10-25 22:35:59] -rw-r--r-- 2 boinc boinc    569691 Oct 25 21:26 input.tar.gz
[2025-10-25 22:35:59] -rw-r--r-- 2 boinc boinc     15120 Oct 25 21:26 start_atlas.sh
[2025-10-25 22:35:59] -rw------- 1 boinc boinc 208375644 Oct 25 22:35 HITS.pool.root.1
[2025-10-25 22:35:59] -rw------- 1 boinc boinc    890880 Oct 25 22:35 result.tar.gz
22:36:00 (521705): run_atlas exited; CPU time 15517.652584
22:36:00 (521705): called boinc_finish(0)

</stderr_txt>
]]>

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