Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:56:41 (4038830): wrapper (7.7.26015): starting
16:56:41 (4038830): wrapper: running run_atlas (--nthreads 4)
[2025-10-25 16:56:41] Arguments: --nthreads 4
[2025-10-25 16:56:41] Threads: 4
[2025-10-25 16:56:41] Checking for CVMFS
[2025-10-25 16:56:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 16:56:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 16:56:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 16:56:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 16:56:41] 2.9.2.0 1897483 6638 100768 152121 1 57 26169076 36864000 0 130560 0 5554519 99.990 247357 1030 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-25 16:56:41] CVMFS is ok
[2025-10-25 16:56:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 16:56:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 16:56:41] Further information can be found at the LHC@home message board.
[2025-10-25 16:56:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 16:56:41] Checking for apptainer binary...
[2025-10-25 16:56:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 16:56:41] Running /usr/bin/apptainer --version
[2025-10-25 16:56:41] apptainer version 1.4.1-1.1
[2025-10-25 16:56:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 16:56:42] cosA131b
[2025-10-25 16:56:42] apptainer works
[2025-10-25 16:56:42] Set ATHENA_PROC_NUMBER=4
[2025-10-25 16:56:42] Set ATHENA_CORE_NUMBER=4
[2025-10-25 16:56:42] Starting ATLAS job with PandaID=6858486021
[2025-10-25 16:56:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 18:25:02]  *** The last 200 lines of the pilot log: ***
[2025-10-25 18:25:02]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6858486021/log.46965017._000878.job.log.tgz.1
[2025-10-25 18:25:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/f8/log.46965017._000878.job.log.tgz.1
[2025-10-25 18:25:02]  workdir=None
[2025-10-25 18:25:02] ]
[2025-10-25 18:25:02] 2025-10-25 16:23:57,353 | INFO     | transferring file log.46965017._000878.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6858486021/log.46965017._000878.job.log.tgz.1 to /local/data/boinc/
[2025-10-25 18:25:02] 2025-10-25 16:23:57,353 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6858486021/log.46965017._000878.job.log.tgz.1 /local/data/boinc/slots/0/log.46965017._0008
[2025-10-25 18:25:02] 2025-10-25 16:23:57,371 | INFO     | adding to output.list: log.46965017._000878.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/f8/log.46965017._000878.job.log.tg
[2025-10-25 18:25:02] 2025-10-25 16:23:57,372 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-25 18:25:02] 2025-10-25 16:23:57,372 | INFO     | summary of transferred files:
[2025-10-25 18:25:02] 2025-10-25 16:23:57,372 | INFO     |  -- lfn=log.46965017._000878.job.log.tgz.1, status_code=0, status=transferred
[2025-10-25 18:25:02] 2025-10-25 16:23:57,372 | INFO     | stage-out finished correctly
[2025-10-25 18:25:02] 2025-10-25 16:23:58,401 | INFO     | time since job start (5228s) is within the limit (172800.0s)
[2025-10-25 18:25:02] 2025-10-25 16:23:59,008 | INFO     | monitor loop #403: job 0:6858486021 is in state 'finished'
[2025-10-25 18:25:02] 2025-10-25 16:23:59,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 18:25:02] 2025-10-25 16:24:00,207 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-25 18:25:02] 2025-10-25 16:24:00,249 | INFO     | job 6858486021 has state=finished
[2025-10-25 18:25:02] 2025-10-25 16:24:00,249 | INFO     | preparing for final server update for job 6858486021 in state='finished'
[2025-10-25 18:25:02] 2025-10-25 16:24:00,249 | INFO     | this job has now completed (state=finished)
[2025-10-25 18:25:02] 2025-10-25 16:24:00,249 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-25 18:25:02] 2025-10-25 16:24:00,249 | INFO     | log transfer has been attempted: DONE
[2025-10-25 18:25:02] 2025-10-25 16:24:00,249 | INFO     | job 6858486021 has finished - writing final server update
[2025-10-25 18:25:02] 2025-10-25 16:24:00,250 | INFO     | total number of processed events: 400 (read)
[2025-10-25 18:25:02] 2025-10-25 16:24:00,250 | INFO     | executing command: lscpu
[2025-10-25 18:25:02] 2025-10-25 16:24:00,269 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-25 18:25:02] 2025-10-25 16:24:00,407 | INFO     | time since job start (5230s) is within the limit (172800.0s)
[2025-10-25 18:25:02] 2025-10-25 16:24:01,512 | INFO     | monitor loop #404: job 0:6858486021 is in state 'finished'
[2025-10-25 18:25:02] 2025-10-25 16:24:01,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 18:25:02] 2025-10-25 16:24:02,413 | INFO     | time since job start (5232s) is within the limit (172800.0s)
[2025-10-25 18:25:02] 2025-10-25 16:24:04,016 | INFO     | monitor loop #405: job 0:6858486021 is in state 'finished'
[2025-10-25 18:25:02] 2025-10-25 16:24:04,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 18:25:02] 2025-10-25 16:24:04,418 | INFO     | time since job start (5234s) is within the limit (172800.0s)
[2025-10-25 18:25:02] 2025-10-25 16:24:06,423 | INFO     | time since job start (5236s) is within the limit (172800.0s)
[2025-10-25 18:25:02] 2025-10-25 16:24:06,519 | INFO     | monitor loop #406: job 0:6858486021 is in state 'finished'
[2025-10-25 18:25:02] 2025-10-25 16:24:06,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 18:25:02] 2025-10-25 16:24:07,279 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-25 18:25:02] 2025-10-25 16:24:07,281 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3231.439125
[2025-10-25 18:25:02] 2025-10-25 16:24:07,282 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6858486021/memory_monitor_summary.json (trf name=prmon)
[2025-10-25 18:25:02] 2025-10-25 16:24:07,283 | INFO     | extracted standard info from prmon json
[2025-10-25 18:25:02] 2025-10-25 16:24:07,283 | INFO     | extracted standard memory fields from prmon json
[2025-10-25 18:25:02] 2025-10-25 16:24:07,283 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-25 18:25:02] 2025-10-25 16:24:07,283 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-25 18:25:02] 2025-10-25 16:24:07,283 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-25 18:25:02] 2025-10-25 16:24:07,284 | INFO     | fitting pss+swap vs Time
[2025-10-25 18:25:02] 2025-10-25 16:24:07,284 | INFO     | sum of square deviations: 152858680.0
[2025-10-25 18:25:02] 2025-10-25 16:24:07,284 | INFO     | sum of deviations: -7211829432.0
[2025-10-25 18:25:02] 2025-10-25 16:24:07,284 | INFO     | mean x: 1761406917.0
[2025-10-25 18:25:02] 2025-10-25 16:24:07,284 | INFO     | mean y: 2465147.670886076
[2025-10-25 18:25:02] 2025-10-25 16:24:07,284 | INFO     | -- intersect: 83105146956.4434
[2025-10-25 18:25:02] 2025-10-25 16:24:07,284 | INFO     | intersect: 83105146956.4434
[2025-10-25 18:25:02] 2025-10-25 16:24:07,284 | INFO     | chi2: 0.11524975061580757
[2025-10-25 18:25:02] 2025-10-25 16:24:07,284 | INFO     | -- intersect: 83105146956.4434
[2025-10-25 18:25:02] 2025-10-25 16:24:07,284 | INFO     | current memory leak: -47.18 B/s (using 79 data points, chi2=0.12)
[2025-10-25 18:25:02] 2025-10-25 16:24:07,284 | INFO     | could have reported an average CPU frequency of 3547 MHz (6 samples)
[2025-10-25 18:25:02] 2025-10-25 16:24:07,285 | INFO     | ..............................
[2025-10-25 18:25:02] 2025-10-25 16:24:07,285 | INFO     | . Timing measurements:
[2025-10-25 18:25:02] 2025-10-25 16:24:07,285 | INFO     | . get job = 0 s
[2025-10-25 18:25:02] 2025-10-25 16:24:07,285 | INFO     | . initial setup = 1 s
[2025-10-25 18:25:02] 2025-10-25 16:24:07,285 | INFO     | . payload setup = 4 s
[2025-10-25 18:25:02] 2025-10-25 16:24:07,285 | INFO     | . stage-in = 0 s
[2025-10-25 18:25:02] 2025-10-25 16:24:07,285 | INFO     | . payload execution = 5203 s
[2025-10-25 18:25:02] 2025-10-25 16:24:07,285 | INFO     | . stage-out = 0 s
[2025-10-25 18:25:02] 2025-10-25 16:24:07,285 | INFO     | . log creation = 0 s
[2025-10-25 18:25:02] 2025-10-25 16:24:07,285 | INFO     | ..............................
[2025-10-25 18:25:02] 2025-10-25 16:24:07,325 | INFO     | 
[2025-10-25 18:25:02] 2025-10-25 16:24:07,325 | INFO     | job summary report
[2025-10-25 18:25:02] 2025-10-25 16:24:07,325 | INFO     | --------------------------------------------------
[2025-10-25 18:25:02] 2025-10-25 16:24:07,325 | INFO     | PanDA job id: 6858486021
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | task id: 46965017
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | errors: (none)
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | pilot state: finished 
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | transexitcode: 0
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | exeerrorcode: 0
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | exeerrordiag: 
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | exitcode: 0
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | exitmsg: OK
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | cpuconsumptiontime: 19827 s
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | nevents: 400
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | neventsw: 0
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | pid: 4049192
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | pgrp: 4049192
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | corecount: 4
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | event service: False
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | sizes: {0: 2348976, 3: 2349238, 10: 2349266, 5211: 2375883, 5213: 2384887, 5216: 2384943, 5223: 2385265}
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | --------------------------------------------------
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | 
[2025-10-25 18:25:02] 2025-10-25 16:24:07,326 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-25 18:25:02] 2025-10-25 16:24:07,345 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | job 6858486021 has completed (purged errors)
[2025-10-25 18:25:02] 2025-10-25 16:24:07,346 | INFO     | overall cleanup function is called
[2025-10-25 18:25:02] 2025-10-25 16:24:08,353 | INFO     | --- collectZombieJob: --- 10, [4049192]
[2025-10-25 18:25:02] 2025-10-25 16:24:08,353 | INFO     | zombie collector waiting for pid 4049192
[2025-10-25 18:25:02] 2025-10-25 16:24:08,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 18:25:02] 2025-10-25 16:24:08,353 | INFO     | collected zombie processes
[2025-10-25 18:25:02] 2025-10-25 16:24:08,353 | INFO     | will attempt to kill all subprocesses of pid=4049192
[2025-10-25 18:25:02] 2025-10-25 16:24:08,397 | INFO     | process IDs to be killed: [4049192] (in reverse order)
[2025-10-25 18:25:02] 2025-10-25 16:24:08,431 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 18:25:02] 2025-10-25 16:24:08,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 18:25:02] 2025-10-25 16:24:08,433 | INFO     | did not find any defunct processes belonging to 4049192
[2025-10-25 18:25:02] 2025-10-25 16:24:08,434 | INFO     | did not find any defunct processes belonging to 4049192
[2025-10-25 18:25:02] 2025-10-25 16:24:08,434 | INFO     | ready for new job
[2025-10-25 18:25:02] 2025-10-25 16:24:08,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 18:25:02] 2025-10-25 16:24:08,435 | INFO     | ***************************************
[2025-10-25 18:25:02] 2025-10-25 16:24:08,435 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 18:25:02] 2025-10-25 16:24:08,435 | INFO     | ***************************************
[2025-10-25 18:25:02] 2025-10-25 16:24:08,435 | INFO     | 
[2025-10-25 18:25:02] 2025-10-25 16:24:08,435 | INFO     | architecture information:
[2025-10-25 18:25:02] 2025-10-25 16:24:08,436 | INFO     | executing command: cat /etc/os-release
[2025-10-25 18:25:02] 2025-10-25 16:24:08,449 | INFO     | cat /etc/os-release:
[2025-10-25 18:25:02] NAME="CentOS Linux"
[2025-10-25 18:25:02] VERSION="7 (Core)"
[2025-10-25 18:25:02] ID="centos"
[2025-10-25 18:25:02] ID_LIKE="rhel fedora"
[2025-10-25 18:25:02] VERSION_ID="7"
[2025-10-25 18:25:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 18:25:02] ANSI_COLOR="0;31"
[2025-10-25 18:25:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 18:25:02] HOME_URL="https://www.centos.org/"
[2025-10-25 18:25:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 18:25:02] 
[2025-10-25 18:25:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 18:25:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 18:25:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 18:25:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 18:25:02] 
[2025-10-25 18:25:02] 2025-10-25 16:24:08,450 | INFO     | ***************************************
[2025-10-25 18:25:02] 2025-10-25 16:24:08,953 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-25 18:25:02] 2025-10-25 16:24:08,971 | INFO     | sufficient remaining disk space (329776103424 B)
[2025-10-25 18:25:02] 2025-10-25 16:24:08,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 18:25:02] 2025-10-25 16:24:08,971 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 18:25:02] 2025-10-25 16:24:08,971 | INFO     | update_server=False
[2025-10-25 18:25:02] 2025-10-25 16:24:08,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 18:25:02] 2025-10-25 16:24:08,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 18:25:02] 2025-10-25 16:24:09,023 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-25 18:25:02] 2025-10-25 16:24:09,023 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-25 18:25:02] 2025-10-25 16:24:09,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 18:25:02] 2025-10-25 16:24:09,023 | INFO     | will abort loop
[2025-10-25 18:25:02] 2025-10-25 16:24:09,481 | INFO     | all data control threads have been joined
[2025-10-25 18:25:02] 2025-10-25 16:24:09,676 | INFO     | all payload control threads have been joined
[2025-10-25 18:25:02] 2025-10-25 16:24:09,777 | INFO     | all job control threads have been joined
[2025-10-25 18:25:02] 2025-10-25 16:24:09,977 | INFO     | [job] retrieve thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:09,977 | INFO     | [job] queue monitor thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:10,029 | INFO     | [job] job monitor thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:10,040 | INFO     | [payload] failed_post thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:10,112 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:10,348 | INFO     | [data] copytool_in thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:10,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 18:25:02] 2025-10-25 16:24:10,487 | INFO     | [data] control thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:10,682 | INFO     | [payload] control thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:10,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 18:25:02] 2025-10-25 16:24:10,782 | INFO     | [job] control thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:11,065 | INFO     | [payload] validate_post thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:11,104 | INFO     | [job] validate thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:11,220 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:11,407 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:12,436 | INFO     | [data] copytool_out thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:14,767 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:19,678 | INFO     | job.realtimelogging is not enabled
[2025-10-25 18:25:02] 2025-10-25 16:24:20,684 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 18:25:02] 2025-10-25 16:24:39,557 | INFO     | PID=4042628 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-25 18:25:02] 2025-10-25 16:24:39,558 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 18:25:02] 2025-10-25 16:24:39,558 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 18:25:02] 2025-10-25 16:24:39,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 18:25:02] 2025-10-25 16:24:56,323 | INFO     | [monitor] cgroup control has ended
[2025-10-25 18:25:02] 2025-10-25 16:24:57,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140642893805376)>', '<ExcThread(monitor, started 140642109871872)>']
[2025-10-25 18:25:02] 2025-10-25 16:24:58,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 18:25:02] 2025-10-25 16:24:58,660 | INFO     | [monitor] control thread has ended
[2025-10-25 18:25:02] 2025-10-25 16:25:02,775 | INFO     | all workflow threads have been joined
[2025-10-25 18:25:02] 2025-10-25 16:25:02,775 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 18:25:02] 2025-10-25 16:25:02,775 | INFO     | traces error code: 0
[2025-10-25 18:25:02] 2025-10-25 16:25:02,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 18:25:02] 2025-10-25 16:25:02,857 [wrapper] ==== pilot stdout END ====
[2025-10-25 18:25:02] 2025-10-25 16:25:02,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 18:25:02] 2025-10-25 16:25:02,866 [wrapper] pilotpid: 4042628
[2025-10-25 18:25:02] 2025-10-25 16:25:02,870 [wrapper] Pilot exit status: 0
[2025-10-25 18:25:02] 2025-10-25 16:25:02,882 [wrapper] pandaids: 6858486021
[2025-10-25 18:25:02] 2025-10-25 16:25:02,906 [wrapper] cleanup supervisor_pilot 4062470 4042629
[2025-10-25 18:25:02] 2025-10-25 16:25:02,910 [wrapper] Test setup, not cleaning
[2025-10-25 18:25:02] 2025-10-25 16:25:02,914 [wrapper] apfmon messages muted
[2025-10-25 18:25:02] 2025-10-25 16:25:02,918 [wrapper] ==== wrapper stdout END ====
[2025-10-25 18:25:02] 2025-10-25 16:25:02,922 [wrapper] ==== wrapper stderr END ====
[2025-10-25 18:25:02]  *** Error codes and diagnostics ***
[2025-10-25 18:25:02]     "exeErrorCode": 0,
[2025-10-25 18:25:02]     "exeErrorDiag": "",
[2025-10-25 18:25:02]     "pilotErrorCode": 0,
[2025-10-25 18:25:02]     "pilotErrorDiag": "",
[2025-10-25 18:25:02]  *** Listing of results directory ***
[2025-10-25 18:25:02] total 467252
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc    557409 Oct 25 02:45 pilot3.tar.gz
[2025-10-25 18:25:02] -rwx------ 1 boinc boinc     36292 Oct 25 03:13 runpilot2-wrapper.sh
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc      5112 Oct 25 03:13 queuedata.json
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc       100 Oct 25 16:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 18:25:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 16:56 run_atlas
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc       105 Oct 25 16:56 job.xml
[2025-10-25 18:25:02] -rw-r--r-- 2 boinc boinc 278329312 Oct 25 16:56 EVNT.46965009._000036.pool.root.1
[2025-10-25 18:25:02] -rw-r--r-- 2 boinc boinc    569705 Oct 25 16:56 input.tar.gz
[2025-10-25 18:25:02] -rw-r--r-- 2 boinc boinc     15120 Oct 25 16:56 start_atlas.sh
[2025-10-25 18:25:02] drwxrwx--x 2 boinc boinc      4096 Oct 25 16:56 shared
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc         0 Oct 25 16:56 boinc_setup_complete
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc      6378 Oct 25 16:56 init_data.xml
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc         0 Oct 25 16:56 boinc_lockfile
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc      2645 Oct 25 16:56 pandaJob.out
[2025-10-25 18:25:02] -rw------- 1 boinc boinc    978288 Oct 25 16:56 agis_schedconf.cvmfs.json
[2025-10-25 18:25:02] -rw------- 1 boinc boinc   1560772 Oct 25 16:56 agis_ddmendpoints.agis.ALL.json
[2025-10-25 18:25:02] drwx------ 5 boinc boinc      4096 Oct 25 16:56 pilot3
[2025-10-25 18:25:02] -rw------- 1 boinc boinc 194180541 Oct 25 18:23 HITS.46965017._000878.pool.root.1
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc       529 Oct 25 18:23 boinc_task_state.xml
[2025-10-25 18:25:02] -rw------- 1 boinc boinc      1019 Oct 25 18:23 memory_monitor_summary.json
[2025-10-25 18:25:02] -rw------- 1 boinc boinc    255712 Oct 25 18:23 log.46965017._000878.job.log.tgz.1
[2025-10-25 18:25:02] -rw------- 1 boinc boinc      7751 Oct 25 18:24 heartbeat.json
[2025-10-25 18:25:02] -rw------- 1 boinc boinc        95 Oct 25 18:24 pilot_heartbeat.json
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc        27 Oct 25 18:24 wrapper_checkpoint.txt
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc      8192 Oct 25 18:24 boinc_mmap_file
[2025-10-25 18:25:02] -rw------- 1 boinc boinc      5010 Oct 25 18:25 pilotlog.txt
[2025-10-25 18:25:02] -rw------- 1 boinc boinc    766005 Oct 25 18:25 log.46965017._000878.job.log.1
[2025-10-25 18:25:02] -rw------- 1 boinc boinc       357 Oct 25 18:25 output.list
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc       620 Oct 25 18:25 runtime_log
[2025-10-25 18:25:02] -rw------- 1 boinc boinc   1044480 Oct 25 18:25 result.tar.gz
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc      8787 Oct 25 18:25 runtime_log.err
[2025-10-25 18:25:02] -rw------- 1 boinc boinc       660 Oct 25 18:25 hWvKDmo1hW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGdmMDmrEx2qn.diag
[2025-10-25 18:25:02] -rw-r--r-- 1 boinc boinc     22234 Oct 25 18:25 stderr.txt
[2025-10-25 18:25:02] HITS file was successfully produced:
[2025-10-25 18:25:02] -rw------- 1 boinc boinc 194180541 Oct 25 18:23 shared/HITS.pool.root.1
[2025-10-25 18:25:02]  *** Contents of shared directory: ***
[2025-10-25 18:25:02] total 463044
[2025-10-25 18:25:02] -rw-r--r-- 2 boinc boinc 278329312 Oct 25 16:56 ATLAS.root_0
[2025-10-25 18:25:02] -rw-r--r-- 2 boinc boinc    569705 Oct 25 16:56 input.tar.gz
[2025-10-25 18:25:02] -rw-r--r-- 2 boinc boinc     15120 Oct 25 16:56 start_atlas.sh
[2025-10-25 18:25:02] -rw------- 1 boinc boinc 194180541 Oct 25 18:23 HITS.pool.root.1
[2025-10-25 18:25:02] -rw------- 1 boinc boinc   1044480 Oct 25 18:25 result.tar.gz
18:25:04 (4038830): run_atlas exited; CPU time 19845.848366
18:25:04 (4038830): called boinc_finish(0)

</stderr_txt>
]]>

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