Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:02:33 (178408): wrapper (7.7.26015): starting
00:02:33 (178408): wrapper: running run_atlas (--nthreads 8)
[2025-10-25 00:02:33] Arguments: --nthreads 8
[2025-10-25 00:02:33] Threads: 8
[2025-10-25 00:02:33] Checking for CVMFS
[2025-10-25 00:02:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 00:02:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 00:02:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 00:02:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 00:02:33] 2.13.2.0 5454 106 49776 152109 2 188 2188516 4096000 3416 130560 0 433188 99.998 4039 945 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-25 00:02:33] CVMFS is ok
[2025-10-25 00:02:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 00:02:33] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-25 00:02:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-25 00:02:33] Further information can be found at the LHC@home message board.
[2025-10-25 00:02:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 00:02:33] Checking for apptainer binary...
[2025-10-25 00:02:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 00:02:33] Running /usr/bin/apptainer --version
[2025-10-25 00:02:33] apptainer version 1.4.2
[2025-10-25 00:02:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 00:02:33] 3950x-linux
[2025-10-25 00:02:33] apptainer works
[2025-10-25 00:02:33] Set ATHENA_PROC_NUMBER=8
[2025-10-25 00:02:33] Set ATHENA_CORE_NUMBER=8
[2025-10-25 00:02:33] Starting ATLAS job with PandaID=6856128370
[2025-10-25 00:02:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc202/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 01:40:00]  *** The last 200 lines of the pilot log: ***
[2025-10-25 01:40:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/f7/log.46771637._125304.job.log.tgz.1
[2025-10-25 01:40:00]  workdir=None
[2025-10-25 01:40:00] ]
[2025-10-25 01:40:00] 2025-10-25 08:38:57,811 | INFO     | transferring file log.46771637._125304.job.log.tgz.1 from /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856128370/log.46771637._125304.job.log.tgz.1 to /var/li
[2025-10-25 01:40:00] 2025-10-25 08:38:57,811 | INFO     | executing command: /usr/bin/env mv /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856128370/log.46771637._125304.job.log.tgz.1 /var/lib/multiboinc/boinc202/slot
[2025-10-25 01:40:00] 2025-10-25 08:38:57,843 | INFO     | adding to output.list: log.46771637._125304.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/f7/log.46771637._125304.job.log.tg
[2025-10-25 01:40:00] 2025-10-25 08:38:57,844 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-25 01:40:00] 2025-10-25 08:38:57,844 | INFO     | summary of transferred files:
[2025-10-25 01:40:00] 2025-10-25 08:38:57,844 | INFO     |  -- lfn=log.46771637._125304.job.log.tgz.1, status_code=0, status=transferred
[2025-10-25 01:40:00] 2025-10-25 08:38:57,846 | INFO     | stage-out finished correctly
[2025-10-25 01:40:00] 2025-10-25 08:38:58,562 | INFO     | time since job start (5774s) is within the limit (172800.0s)
[2025-10-25 01:40:00] 2025-10-25 08:38:58,783 | INFO     | monitor loop #424: job 0:6856128370 is in state 'finished'
[2025-10-25 01:40:00] 2025-10-25 08:38:58,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 01:40:00] 2025-10-25 08:38:59,877 | INFO     | PID=182240 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-25 01:40:00] 2025-10-25 08:38:59,877 | INFO     | .. there are 5 such processes running
[2025-10-25 01:40:00] 2025-10-25 08:38:59,948 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-25 01:40:00] 2025-10-25 08:39:00,061 | INFO     | job 6856128370 has state=finished
[2025-10-25 01:40:00] 2025-10-25 08:39:00,061 | INFO     | preparing for final server update for job 6856128370 in state='finished'
[2025-10-25 01:40:00] 2025-10-25 08:39:00,063 | INFO     | this job has now completed (state=finished)
[2025-10-25 01:40:00] 2025-10-25 08:39:00,063 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-25 01:40:00] 2025-10-25 08:39:00,063 | INFO     | log transfer has been attempted: DONE
[2025-10-25 01:40:00] 2025-10-25 08:39:00,064 | INFO     | job 6856128370 has finished - writing final server update
[2025-10-25 01:40:00] 2025-10-25 08:39:00,064 | INFO     | total number of processed events: 400 (read)
[2025-10-25 01:40:00] 2025-10-25 08:39:00,064 | INFO     | executing command: lscpu
[2025-10-25 01:40:00] 2025-10-25 08:39:00,127 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-25 01:40:00] 2025-10-25 08:39:00,878 | INFO     | time since job start (5776s) is within the limit (172800.0s)
[2025-10-25 01:40:00] 2025-10-25 08:39:01,289 | INFO     | monitor loop #425: job 0:6856128370 is in state 'finished'
[2025-10-25 01:40:00] 2025-10-25 08:39:01,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 01:40:00] 2025-10-25 08:39:02,883 | INFO     | time since job start (5778s) is within the limit (172800.0s)
[2025-10-25 01:40:00] 2025-10-25 08:39:03,792 | INFO     | monitor loop #426: job 0:6856128370 is in state 'finished'
[2025-10-25 01:40:00] 2025-10-25 08:39:03,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 01:40:00] 2025-10-25 08:39:04,889 | INFO     | time since job start (5780s) is within the limit (172800.0s)
[2025-10-25 01:40:00] 2025-10-25 08:39:06,295 | INFO     | monitor loop #427: job 0:6856128370 is in state 'finished'
[2025-10-25 01:40:00] 2025-10-25 08:39:06,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 01:40:00] 2025-10-25 08:39:06,894 | INFO     | time since job start (5782s) is within the limit (172800.0s)
[2025-10-25 01:40:00] 2025-10-25 08:39:08,314 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-25 01:40:00] 2025-10-25 08:39:08,323 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3274.6976562500004
[2025-10-25 01:40:00] 2025-10-25 08:39:08,335 | INFO     | using path: /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856128370/memory_monitor_summary.json (trf name=prmon)
[2025-10-25 01:40:00] 2025-10-25 08:39:08,335 | INFO     | extracted standard info from prmon json
[2025-10-25 01:40:00] 2025-10-25 08:39:08,336 | INFO     | extracted standard memory fields from prmon json
[2025-10-25 01:40:00] 2025-10-25 08:39:08,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-25 01:40:00] 2025-10-25 08:39:08,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-25 01:40:00] 2025-10-25 08:39:08,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-25 01:40:00] 2025-10-25 08:39:08,341 | INFO     | fitting pss+swap vs Time
[2025-10-25 01:40:00] 2025-10-25 08:39:08,341 | INFO     | sum of square deviations: 211285822.0
[2025-10-25 01:40:00] 2025-10-25 08:39:08,342 | INFO     | sum of deviations: -959644558.0
[2025-10-25 01:40:00] 2025-10-25 08:39:08,342 | INFO     | mean x: 1761378746.5
[2025-10-25 01:40:00] 2025-10-25 08:39:08,342 | INFO     | mean y: 2511081.022727273
[2025-10-25 01:40:00] 2025-10-25 08:39:08,342 | INFO     | -- intersect: 8002562919.122808
[2025-10-25 01:40:00] 2025-10-25 08:39:08,342 | INFO     | intersect: 8002562919.122808
[2025-10-25 01:40:00] 2025-10-25 08:39:08,342 | INFO     | chi2: 0.0042983635036449586
[2025-10-25 01:40:00] 2025-10-25 08:39:08,342 | INFO     | -- intersect: 8002562919.122808
[2025-10-25 01:40:00] 2025-10-25 08:39:08,342 | INFO     | current memory leak: -4.54 B/s (using 88 data points, chi2=0.00)
[2025-10-25 01:40:00] 2025-10-25 08:39:08,343 | INFO     | could have reported an average CPU frequency of 3245 MHz (7 samples)
[2025-10-25 01:40:00] 2025-10-25 08:39:08,343 | INFO     | ..............................
[2025-10-25 01:40:00] 2025-10-25 08:39:08,343 | INFO     | . Timing measurements:
[2025-10-25 01:40:00] 2025-10-25 08:39:08,343 | INFO     | . get job = 0 s
[2025-10-25 01:40:00] 2025-10-25 08:39:08,343 | INFO     | . initial setup = 3 s
[2025-10-25 01:40:00] 2025-10-25 08:39:08,346 | INFO     | . payload setup = 4 s
[2025-10-25 01:40:00] 2025-10-25 08:39:08,346 | INFO     | . stage-in = 0 s
[2025-10-25 01:40:00] 2025-10-25 08:39:08,346 | INFO     | . payload execution = 5749 s
[2025-10-25 01:40:00] 2025-10-25 08:39:08,346 | INFO     | . stage-out = 0 s
[2025-10-25 01:40:00] 2025-10-25 08:39:08,346 | INFO     | . log creation = 0 s
[2025-10-25 01:40:00] 2025-10-25 08:39:08,346 | INFO     | ..............................
[2025-10-25 01:40:00] 2025-10-25 08:39:08,555 | INFO     | 
[2025-10-25 01:40:00] 2025-10-25 08:39:08,555 | INFO     | job summary report
[2025-10-25 01:40:00] 2025-10-25 08:39:08,555 | INFO     | --------------------------------------------------
[2025-10-25 01:40:00] 2025-10-25 08:39:08,555 | INFO     | PanDA job id: 6856128370
[2025-10-25 01:40:00] 2025-10-25 08:39:08,555 | INFO     | task id: 46771637
[2025-10-25 01:40:00] 2025-10-25 08:39:08,555 | INFO     | errors: (none)
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | pilot state: finished 
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | transexitcode: 0
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | exeerrorcode: 0
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | exeerrordiag: 
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | exitcode: 0
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | exitmsg: OK
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | cpuconsumptiontime: 35902 s
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | nevents: 400
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | neventsw: 0
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | pid: 188905
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | pgrp: 188905
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | corecount: 8
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | event service: False
[2025-10-25 01:40:00] 2025-10-25 08:39:08,556 | INFO     | sizes: {0: 2348666, 1: 2348921, 5: 2349183, 12: 2349239, 5758: 2376029, 5759: 2385055, 5761: 2385239, 5769: 2385433}
[2025-10-25 01:40:00] 2025-10-25 08:39:08,557 | INFO     | --------------------------------------------------
[2025-10-25 01:40:00] 2025-10-25 08:39:08,557 | INFO     | 
[2025-10-25 01:40:00] 2025-10-25 08:39:08,557 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc202/slots/1
[2025-10-25 01:40:00] 2025-10-25 08:39:08,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | job 6856128370 has completed (purged errors)
[2025-10-25 01:40:00] 2025-10-25 08:39:08,600 | INFO     | overall cleanup function is called
[2025-10-25 01:40:00] 2025-10-25 08:39:09,613 | INFO     | --- collectZombieJob: --- 10, [188905]
[2025-10-25 01:40:00] 2025-10-25 08:39:09,613 | INFO     | zombie collector waiting for pid 188905
[2025-10-25 01:40:00] 2025-10-25 08:39:09,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 01:40:00] 2025-10-25 08:39:09,613 | INFO     | collected zombie processes
[2025-10-25 01:40:00] 2025-10-25 08:39:09,613 | INFO     | will attempt to kill all subprocesses of pid=188905
[2025-10-25 01:40:00] 2025-10-25 08:39:09,963 | INFO     | process IDs to be killed: [188905] (in reverse order)
[2025-10-25 01:40:00] 2025-10-25 08:39:10,091 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 01:40:00] 2025-10-25 08:39:10,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 01:40:00] 2025-10-25 08:39:10,102 | INFO     | did not find any defunct processes belonging to 188905
[2025-10-25 01:40:00] 2025-10-25 08:39:10,112 | INFO     | did not find any defunct processes belonging to 188905
[2025-10-25 01:40:00] 2025-10-25 08:39:10,113 | INFO     | ready for new job
[2025-10-25 01:40:00] 2025-10-25 08:39:10,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 01:40:00] 2025-10-25 08:39:10,117 | INFO     | ***************************************
[2025-10-25 01:40:00] 2025-10-25 08:39:10,117 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 01:40:00] 2025-10-25 08:39:10,117 | INFO     | ***************************************
[2025-10-25 01:40:00] 2025-10-25 08:39:10,117 | INFO     | 
[2025-10-25 01:40:00] 2025-10-25 08:39:10,122 | INFO     | architecture information:
[2025-10-25 01:40:00] 2025-10-25 08:39:10,122 | INFO     | executing command: cat /etc/os-release
[2025-10-25 01:40:00] 2025-10-25 08:39:10,150 | INFO     | cat /etc/os-release:
[2025-10-25 01:40:00] NAME="CentOS Linux"
[2025-10-25 01:40:00] VERSION="7 (Core)"
[2025-10-25 01:40:00] ID="centos"
[2025-10-25 01:40:00] ID_LIKE="rhel fedora"
[2025-10-25 01:40:00] VERSION_ID="7"
[2025-10-25 01:40:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 01:40:00] ANSI_COLOR="0;31"
[2025-10-25 01:40:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 01:40:00] HOME_URL="https://www.centos.org/"
[2025-10-25 01:40:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 01:40:00] 
[2025-10-25 01:40:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 01:40:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 01:40:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 01:40:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 01:40:00] 
[2025-10-25 01:40:00] 2025-10-25 08:39:10,150 | INFO     | ***************************************
[2025-10-25 01:40:00] 2025-10-25 08:39:10,656 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc202/slots/1
[2025-10-25 01:40:00] 2025-10-25 08:39:10,685 | INFO     | sufficient remaining disk space (192460881920 B)
[2025-10-25 01:40:00] 2025-10-25 08:39:10,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 01:40:00] 2025-10-25 08:39:10,685 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 01:40:00] 2025-10-25 08:39:10,685 | INFO     | update_server=False
[2025-10-25 01:40:00] 2025-10-25 08:39:10,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 01:40:00] 2025-10-25 08:39:10,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 01:40:00] 2025-10-25 08:39:10,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 01:40:00] 2025-10-25 08:39:10,689 | INFO     | aborting loop
[2025-10-25 01:40:00] 2025-10-25 08:39:10,879 | INFO     | all job control threads have been joined
[2025-10-25 01:40:00] 2025-10-25 08:39:10,919 | INFO     | all data control threads have been joined
[2025-10-25 01:40:00] 2025-10-25 08:39:10,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 01:40:00] 2025-10-25 08:39:11,280 | INFO     | all payload control threads have been joined
[2025-10-25 01:40:00] 2025-10-25 08:39:11,691 | INFO     | [job] retrieve thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:11,695 | INFO     | [job] job monitor thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:11,884 | INFO     | [job] control thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:11,924 | INFO     | [data] control thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:12,270 | INFO     | [data] copytool_in thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:12,285 | INFO     | [payload] control thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:12,343 | INFO     | [payload] validate_post thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:12,581 | INFO     | [job] validate thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:12,791 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:12,864 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:12,880 | INFO     | [payload] failed_post thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:12,977 | INFO     | [data] copytool_out thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:13,015 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:13,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 01:40:00] 2025-10-25 08:39:14,473 | INFO     | [job] queue monitor thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:14,694 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:21,546 | INFO     | job.realtimelogging is not enabled
[2025-10-25 01:40:00] 2025-10-25 08:39:22,551 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 01:40:00] 2025-10-25 08:39:40,310 | INFO     | PID=182240 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-25 01:40:00] 2025-10-25 08:39:40,310 | INFO     | .. there are 5 such processes running
[2025-10-25 01:40:00] 2025-10-25 08:39:40,315 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 01:40:00] 2025-10-25 08:39:40,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 01:40:00] 2025-10-25 08:39:40,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 01:40:00] 2025-10-25 08:39:53,523 | INFO     | [monitor] cgroup control has ended
[2025-10-25 01:40:00] 2025-10-25 08:39:55,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124543906477888)>', '<ExcThread(monitor, started 124542953441024)>']
[2025-10-25 01:40:00] 2025-10-25 08:39:56,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 01:40:00] 2025-10-25 08:39:56,395 | INFO     | [monitor] control thread has ended
[2025-10-25 01:40:00] 2025-10-25 08:40:00,507 | INFO     | all workflow threads have been joined
[2025-10-25 01:40:00] 2025-10-25 08:40:00,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 01:40:00] 2025-10-25 08:40:00,507 | INFO     | traces error code: 0
[2025-10-25 01:40:00] 2025-10-25 08:40:00,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 01:40:00] 2025-10-25 08:40:00,682 [wrapper] ==== pilot stdout END ====
[2025-10-25 01:40:00] 2025-10-25 08:40:00,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 01:40:00] 2025-10-25 08:40:00,696 [wrapper] pilotpid: 182240
[2025-10-25 01:40:00] 2025-10-25 08:40:00,702 [wrapper] Pilot exit status: 0
[2025-10-25 01:40:00] 2025-10-25 08:40:00,723 [wrapper] pandaids: 6856128370
[2025-10-25 01:40:00] 2025-10-25 08:40:00,780 [wrapper] cleanup supervisor_pilot  297892 182241
[2025-10-25 01:40:00] 2025-10-25 08:40:00,787 [wrapper] Test setup, not cleaning
[2025-10-25 01:40:00] 2025-10-25 08:40:00,793 [wrapper] apfmon messages muted
[2025-10-25 01:40:00] 2025-10-25 08:40:00,795 [wrapper] ==== wrapper stdout END ====
[2025-10-25 01:40:00] 2025-10-25 08:40:00,799 [wrapper] ==== wrapper stderr END ====
[2025-10-25 01:40:00]  *** Error codes and diagnostics ***
[2025-10-25 01:40:00]     "exeErrorCode": 0,
[2025-10-25 01:40:00]     "exeErrorDiag": "",
[2025-10-25 01:40:00]     "pilotErrorCode": 0,
[2025-10-25 01:40:00]     "pilotErrorDiag": "",
[2025-10-25 01:40:00]  *** Listing of results directory ***
[2025-10-25 01:40:00] total 426052
[2025-10-25 01:40:00] -rw-r--r-- 1 root root    557409 Oct 24 14:37 pilot3.tar.gz
[2025-10-25 01:40:00] -rw-r--r-- 1 root root      5112 Oct 24 14:43 queuedata.json
[2025-10-25 01:40:00] -rwx------ 1 4871 1028     36292 Oct 24 14:44 runpilot2-wrapper.sh
[2025-10-25 01:40:00] -rw-r--r-- 1 root root       100 Oct 25 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 01:40:00] -rwxr-xr-x 1 root root      7986 Oct 25 00:02 run_atlas
[2025-10-25 01:40:00] -rw-r--r-- 1 root root       105 Oct 25 00:02 job.xml
[2025-10-25 01:40:00] -rw-r--r-- 2 root root 227033874 Oct 25 00:02 EVNT.46771634._003498.pool.root.1
[2025-10-25 01:40:00] drwxrwx--x 2 root root      4096 Oct 25 00:02 shared
[2025-10-25 01:40:00] -rw-r--r-- 2 root root    569683 Oct 25 00:02 input.tar.gz
[2025-10-25 01:40:00] -rw-r--r-- 2 root root     15120 Oct 25 00:02 start_atlas.sh
[2025-10-25 01:40:00] -rw-r--r-- 1 root root         0 Oct 25 00:02 boinc_setup_complete
[2025-10-25 01:40:00] -rw-r--r-- 1 root root      7437 Oct 25 00:02 init_data.xml
[2025-10-25 01:40:00] -rw-r--r-- 1 root root         0 Oct 25 00:02 boinc_lockfile
[2025-10-25 01:40:00] -rw-r--r-- 1 root root      2559 Oct 25 00:02 pandaJob.out
[2025-10-25 01:40:00] -rw------- 1 root root    978613 Oct 25 00:02 agis_schedconf.cvmfs.json
[2025-10-25 01:40:00] -rw------- 1 root root   1560772 Oct 25 00:02 agis_ddmendpoints.agis.ALL.json
[2025-10-25 01:40:00] drwxr-xr-x 5  320  320      4096 Oct 25 00:02 pilot3
[2025-10-25 01:40:00] -rw------- 1 root root 202957051 Oct 25 01:38 HITS.46771637._125304.pool.root.1
[2025-10-25 01:40:00] -rw-r--r-- 1 root root       529 Oct 25 01:38 boinc_task_state.xml
[2025-10-25 01:40:00] -rw------- 1 root root      1022 Oct 25 01:38 memory_monitor_summary.json
[2025-10-25 01:40:00] -rw------- 1 root root    332034 Oct 25 01:38 log.46771637._125304.job.log.tgz.1
[2025-10-25 01:40:00] -rw------- 1 root root      7740 Oct 25 01:39 heartbeat.json
[2025-10-25 01:40:00] -rw------- 1 root root        95 Oct 25 01:39 pilot_heartbeat.json
[2025-10-25 01:40:00] -rw-r--r-- 1 root root        27 Oct 25 01:39 wrapper_checkpoint.txt
[2025-10-25 01:40:00] -rw-r--r-- 1 root root      8192 Oct 25 01:39 boinc_mmap_file
[2025-10-25 01:40:00] -rw------- 1 root root      4909 Oct 25 01:40 pilotlog.txt
[2025-10-25 01:40:00] -rw------- 1 root root    852219 Oct 25 01:40 log.46771637._125304.job.log.1
[2025-10-25 01:40:00] -rw------- 1 root root       357 Oct 25 01:40 output.list
[2025-10-25 01:40:00] -rw-r--r-- 1 root root       620 Oct 25 01:40 runtime_log
[2025-10-25 01:40:00] -rw------- 1 root root   1208320 Oct 25 01:40 result.tar.gz
[2025-10-25 01:40:00] -rw-r--r-- 1 root root      8876 Oct 25 01:40 runtime_log.err
[2025-10-25 01:40:00] -rw------- 1 root root       648 Oct 25 01:40 2hjNDm3keW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhEmMDmfBJHZn.diag
[2025-10-25 01:40:00] -rw-r--r-- 1 root root     22440 Oct 25 01:40 stderr.txt
[2025-10-25 01:40:00] HITS file was successfully produced:
[2025-10-25 01:40:00] -rw------- 1 root root 202957051 Oct 25 01:38 shared/HITS.pool.root.1
[2025-10-25 01:40:00]  *** Contents of shared directory: ***
[2025-10-25 01:40:01] total 421684
[2025-10-25 01:40:01] -rw-r--r-- 2 root root 227033874 Oct 25 00:02 ATLAS.root_0
[2025-10-25 01:40:01] -rw-r--r-- 2 root root    569683 Oct 25 00:02 input.tar.gz
[2025-10-25 01:40:01] -rw-r--r-- 2 root root     15120 Oct 25 00:02 start_atlas.sh
[2025-10-25 01:40:01] -rw------- 1 root root 202957051 Oct 25 01:38 HITS.pool.root.1
[2025-10-25 01:40:01] -rw------- 1 root root   1208320 Oct 25 01:40 result.tar.gz
01:40:02 (178408): run_atlas exited; CPU time 35976.847680
01:40:02 (178408): called boinc_finish(0)

</stderr_txt>
]]>

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