Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:30:29 (20606): wrapper (7.7.26015): starting
16:30:29 (20606): wrapper: running run_atlas (--nthreads 8)
[2025-10-25 16:30:29] Arguments: --nthreads 8
[2025-10-25 16:30:29] Threads: 8
[2025-10-25 16:30:29] Checking for CVMFS
[2025-10-25 16:30:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 16:30:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 16:30:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 16:30:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 16:30:30] 2.11.2.0 14417 34779 90608 152121 0 165 19878096 25165824 4109 130560 0 10742128 99.922 5321196 1734 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-25 16:30:30] CVMFS is ok
[2025-10-25 16:30:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 16:30:30] Checking for apptainer binary...
[2025-10-25 16:30:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 16:30:30] Running /usr/bin/apptainer --version
[2025-10-25 16:30:30] apptainer version 1.3.2-1.el7
[2025-10-25 16:30:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 16:30:32] cg-vwn452.simple-grid.lan
[2025-10-25 16:30:32] apptainer works
[2025-10-25 16:30:32] Set ATHENA_PROC_NUMBER=8
[2025-10-25 16:30:32] Set ATHENA_CORE_NUMBER=8
[2025-10-25 16:30:32] Starting ATLAS job with PandaID=6855927545
[2025-10-25 16:30:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 21:21:34]  *** The last 200 lines of the pilot log: ***
[2025-10-25 21:21:34] 2025-10-25 19:20:41,816 | INFO     | sum of square deviations: 6734191380.0
[2025-10-25 21:21:34] 2025-10-25 19:20:41,819 | INFO     | sum of deviations: 58648617140.00001
[2025-10-25 21:21:34] 2025-10-25 19:20:41,819 | INFO     | mean x: 1761411450.0
[2025-10-25 21:21:34] 2025-10-25 19:20:41,819 | INFO     | mean y: 2484270.8960573478
[2025-10-25 21:21:34] 2025-10-25 19:20:41,819 | INFO     | -- intersect: -15337790444.768805
[2025-10-25 21:21:34] 2025-10-25 19:20:41,819 | INFO     | intersect: -15337790444.768805
[2025-10-25 21:21:34] 2025-10-25 19:20:41,820 | INFO     | chi2: 5.766297502466567
[2025-10-25 21:21:34] 2025-10-25 19:20:41,820 | INFO     | sum of square deviations: 6378584712.5
[2025-10-25 21:21:34] 2025-10-25 19:20:41,823 | INFO     | sum of deviations: 76453495969.50003
[2025-10-25 21:21:34] 2025-10-25 19:20:41,823 | INFO     | mean x: 1761411297.5
[2025-10-25 21:21:34] 2025-10-25 19:20:41,823 | INFO     | mean y: 2491789.886861314
[2025-10-25 21:21:34] 2025-10-25 19:20:41,824 | INFO     | -- intersect: -21109723161.204937
[2025-10-25 21:21:34] 2025-10-25 19:20:41,824 | INFO     | intersect: -21109723161.204937
[2025-10-25 21:21:34] 2025-10-25 19:20:41,824 | INFO     | chi2: 5.024656898501422
[2025-10-25 21:21:34] 2025-10-25 19:20:41,824 | INFO     | current chi2=5.024656898501422 (change=12.861643084629328 %)
[2025-10-25 21:21:34] 2025-10-25 19:20:41,825 | INFO     | right removable region: 273
[2025-10-25 21:21:34] 2025-10-25 19:20:41,825 | INFO     | sum of square deviations: 6378584712.5
[2025-10-25 21:21:34] 2025-10-25 19:20:41,828 | INFO     | sum of deviations: -37260231487.0
[2025-10-25 21:21:34] 2025-10-25 19:20:41,828 | INFO     | mean x: 1761411602.5
[2025-10-25 21:21:34] 2025-10-25 19:20:41,828 | INFO     | mean y: 2525363.2408759124
[2025-10-25 21:21:34] 2025-10-25 19:20:41,828 | INFO     | -- intersect: 10291736373.392153
[2025-10-25 21:21:34] 2025-10-25 19:20:41,828 | INFO     | intersect: 10291736373.392153
[2025-10-25 21:21:34] 2025-10-25 19:20:41,829 | INFO     | chi2: 1.3209627099744636
[2025-10-25 21:21:34] 2025-10-25 19:20:41,829 | INFO     | current chi2=1.3209627099744636 (change=77.09166567612208 %)
[2025-10-25 21:21:34] 2025-10-25 19:20:41,829 | INFO     | sum of square deviations: 6035722470.0
[2025-10-25 21:21:34] 2025-10-25 19:20:41,832 | INFO     | sum of deviations: -57503002248.0
[2025-10-25 21:21:34] 2025-10-25 19:20:41,832 | INFO     | mean x: 1761411755.0
[2025-10-25 21:21:34] 2025-10-25 19:20:41,832 | INFO     | mean y: 2534295.914498141
[2025-10-25 21:21:34] 2025-10-25 19:20:41,832 | INFO     | -- intersect: 16783700860.62214
[2025-10-25 21:21:34] 2025-10-25 19:20:41,832 | INFO     | intersect: 16783700860.62214
[2025-10-25 21:21:34] 2025-10-25 19:20:41,833 | INFO     | chi2: 0.9763293426843317
[2025-10-25 21:21:34] 2025-10-25 19:20:41,833 | INFO     | current chi2=0.9763293426843317 (change=26.089560642994552 %)
[2025-10-25 21:21:34] 2025-10-25 19:20:41,833 | INFO     | sum of square deviations: 5705372090.0
[2025-10-25 21:21:34] 2025-10-25 19:20:41,843 | INFO     | sum of deviations: -55021478846.5
[2025-10-25 21:21:34] 2025-10-25 19:20:41,843 | INFO     | mean x: 1761411907.5
[2025-10-25 21:21:34] 2025-10-25 19:20:41,843 | INFO     | mean y: 2533124.9053030303
[2025-10-25 21:21:34] 2025-10-25 19:20:41,843 | INFO     | -- intersect: 16989240824.189554
[2025-10-25 21:21:34] 2025-10-25 19:20:41,844 | INFO     | intersect: 16989240824.189554
[2025-10-25 21:21:34] 2025-10-25 19:20:41,844 | INFO     | chi2: 0.9613031574443713
[2025-10-25 21:21:34] 2025-10-25 19:20:41,844 | INFO     | current chi2=0.9613031574443713 (change=1.5390488212355864 %)
[2025-10-25 21:21:34] 2025-10-25 19:20:41,844 | INFO     | left removable region: 30
[2025-10-25 21:21:34] 2025-10-25 19:20:41,845 | INFO     | sum of square deviations: 4449281562.0
[2025-10-25 21:21:34] 2025-10-25 19:20:41,847 | INFO     | sum of deviations: -10569392834.999998
[2025-10-25 21:21:34] 2025-10-25 19:20:41,847 | INFO     | mean x: 1761412182.0
[2025-10-25 21:21:34] 2025-10-25 19:20:41,847 | INFO     | mean y: 2528743.279835391
[2025-10-25 21:21:34] 2025-10-25 19:20:41,847 | INFO     | -- intersect: 4186812663.388489
[2025-10-25 21:21:34] 2025-10-25 19:20:41,847 | INFO     | intersect: 4186812663.388489
[2025-10-25 21:21:34] 2025-10-25 19:20:41,848 | INFO     | chi2: 0.08581011091239527
[2025-10-25 21:21:34] 2025-10-25 19:20:41,848 | INFO     | -- intersect: 4186812663.388489
[2025-10-25 21:21:34] 2025-10-25 19:20:41,848 | INFO     | current memory leak: -2.38 B/s (using 243 data points, chi2=0.09)
[2025-10-25 21:21:34] 2025-10-25 19:20:41,849 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-25 21:21:34] 2025-10-25 19:20:41,849 | INFO     | ..............................
[2025-10-25 21:21:34] 2025-10-25 19:20:41,849 | INFO     | . Timing measurements:
[2025-10-25 21:21:34] 2025-10-25 19:20:41,849 | INFO     | . get job = 0 s
[2025-10-25 21:21:34] 2025-10-25 19:20:41,849 | INFO     | . initial setup = 3 s
[2025-10-25 21:21:34] 2025-10-25 19:20:41,849 | INFO     | . payload setup = 121 s
[2025-10-25 21:21:34] 2025-10-25 19:20:41,850 | INFO     | . stage-in = 0 s
[2025-10-25 21:21:34] 2025-10-25 19:20:41,850 | INFO     | . payload execution = 17143 s
[2025-10-25 21:21:34] 2025-10-25 19:20:41,850 | INFO     | . stage-out = 2 s
[2025-10-25 21:21:34] 2025-10-25 19:20:41,850 | INFO     | . log creation = 0 s
[2025-10-25 21:21:34] 2025-10-25 19:20:41,850 | INFO     | ..............................
[2025-10-25 21:21:34] 2025-10-25 19:20:42,000 | INFO     | 
[2025-10-25 21:21:34] 2025-10-25 19:20:42,000 | INFO     | job summary report
[2025-10-25 21:21:34] 2025-10-25 19:20:42,001 | INFO     | --------------------------------------------------
[2025-10-25 21:21:34] 2025-10-25 19:20:42,001 | INFO     | PanDA job id: 6855927545
[2025-10-25 21:21:34] 2025-10-25 19:20:42,001 | INFO     | task id: 46771637
[2025-10-25 21:21:34] 2025-10-25 19:20:42,001 | INFO     | errors: (none)
[2025-10-25 21:21:34] 2025-10-25 19:20:42,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 21:21:34] 2025-10-25 19:20:42,001 | INFO     | pilot state: finished 
[2025-10-25 21:21:34] 2025-10-25 19:20:42,001 | INFO     | transexitcode: 0
[2025-10-25 21:21:34] 2025-10-25 19:20:42,001 | INFO     | exeerrorcode: 0
[2025-10-25 21:21:34] 2025-10-25 19:20:42,001 | INFO     | exeerrordiag: 
[2025-10-25 21:21:34] 2025-10-25 19:20:42,002 | INFO     | exitcode: 0
[2025-10-25 21:21:34] 2025-10-25 19:20:42,002 | INFO     | exitmsg: OK
[2025-10-25 21:21:34] 2025-10-25 19:20:42,002 | INFO     | cpuconsumptiontime: 61857 s
[2025-10-25 21:21:34] 2025-10-25 19:20:42,002 | INFO     | nevents: 400
[2025-10-25 21:21:34] 2025-10-25 19:20:42,002 | INFO     | neventsw: 0
[2025-10-25 21:21:34] 2025-10-25 19:20:42,002 | INFO     | pid: 4439
[2025-10-25 21:21:34] 2025-10-25 19:20:42,002 | INFO     | pgrp: 4439
[2025-10-25 21:21:34] 2025-10-25 19:20:42,002 | INFO     | corecount: 8
[2025-10-25 21:21:34] 2025-10-25 19:20:42,002 | INFO     | event service: False
[2025-10-25 21:21:34] 2025-10-25 19:20:42,003 | INFO     | sizes: {0: 2348107, 1: 2348964, 2: 2348964, 12: 2349254, 13: 2349282, 17269: 2380724, 17273: 2389780, 17339: 2389918}
[2025-10-25 21:21:34] 2025-10-25 19:20:42,003 | INFO     | --------------------------------------------------
[2025-10-25 21:21:34] 2025-10-25 19:20:42,003 | INFO     | 
[2025-10-25 21:21:34] 2025-10-25 19:20:42,003 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-10-25 21:21:34] 2025-10-25 19:20:42,080 | INFO     | time since job start (17386s) is within the limit (172800.0s)
[2025-10-25 21:21:34] 2025-10-25 19:20:42,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,233 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 21:21:34] 2025-10-25 19:20:42,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,234 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 21:21:34] 2025-10-25 19:20:42,234 | INFO     | job 6855927545 has completed (purged errors)
[2025-10-25 21:21:34] 2025-10-25 19:20:42,235 | INFO     | overall cleanup function is called
[2025-10-25 21:21:34] 2025-10-25 19:20:43,248 | INFO     | --- collectZombieJob: --- 10, [4439]
[2025-10-25 21:21:34] 2025-10-25 19:20:43,248 | INFO     | zombie collector waiting for pid 4439
[2025-10-25 21:21:34] 2025-10-25 19:20:43,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 21:21:34] 2025-10-25 19:20:43,249 | INFO     | collected zombie processes
[2025-10-25 21:21:34] 2025-10-25 19:20:43,249 | INFO     | will attempt to kill all subprocesses of pid=4439
[2025-10-25 21:21:34] 2025-10-25 19:20:43,403 | INFO     | process IDs to be killed: [4439] (in reverse order)
[2025-10-25 21:21:34] 2025-10-25 19:20:43,890 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 21:21:34] 2025-10-25 19:20:43,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 21:21:34] 2025-10-25 19:20:43,894 | INFO     | did not find any defunct processes belonging to 4439
[2025-10-25 21:21:34] 2025-10-25 19:20:43,902 | INFO     | did not find any defunct processes belonging to 4439
[2025-10-25 21:21:34] 2025-10-25 19:20:43,903 | INFO     | ready for new job
[2025-10-25 21:21:34] 2025-10-25 19:20:43,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 21:21:34] 2025-10-25 19:20:43,905 | INFO     | ***************************************
[2025-10-25 21:21:34] 2025-10-25 19:20:43,906 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 21:21:34] 2025-10-25 19:20:43,906 | INFO     | ***************************************
[2025-10-25 21:21:34] 2025-10-25 19:20:43,906 | INFO     | 
[2025-10-25 21:21:34] 2025-10-25 19:20:43,906 | INFO     | pilot is running in a VM
[2025-10-25 21:21:34] 2025-10-25 19:20:43,907 | INFO     | architecture information:
[2025-10-25 21:21:34] 2025-10-25 19:20:43,913 | INFO     | executing command: cat /etc/os-release
[2025-10-25 21:21:34] 2025-10-25 19:20:43,986 | INFO     | cat /etc/os-release:
[2025-10-25 21:21:34] NAME="CentOS Linux"
[2025-10-25 21:21:34] VERSION="7 (Core)"
[2025-10-25 21:21:34] ID="centos"
[2025-10-25 21:21:34] ID_LIKE="rhel fedora"
[2025-10-25 21:21:34] VERSION_ID="7"
[2025-10-25 21:21:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 21:21:34] ANSI_COLOR="0;31"
[2025-10-25 21:21:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 21:21:34] HOME_URL="https://www.centos.org/"
[2025-10-25 21:21:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 21:21:34] 
[2025-10-25 21:21:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 21:21:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 21:21:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 21:21:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 21:21:34] 
[2025-10-25 21:21:34] 2025-10-25 19:20:43,986 | INFO     | ***************************************
[2025-10-25 21:21:34] 2025-10-25 19:20:44,489 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-10-25 21:21:34] 2025-10-25 19:20:44,588 | INFO     | sufficient remaining disk space (497122541568 B)
[2025-10-25 21:21:34] 2025-10-25 19:20:44,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 21:21:34] 2025-10-25 19:20:44,589 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 21:21:34] 2025-10-25 19:20:44,589 | INFO     | update_server=False
[2025-10-25 21:21:34] 2025-10-25 19:20:44,589 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 21:21:34] 2025-10-25 19:20:44,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 21:21:34] 2025-10-25 19:20:45,018 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-25 21:21:34] 2025-10-25 19:20:45,018 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-25 21:21:34] 2025-10-25 19:20:45,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 21:21:34] 2025-10-25 19:20:45,019 | INFO     | will abort loop
[2025-10-25 21:21:34] 2025-10-25 19:20:45,424 | INFO     | all data control threads have been joined
[2025-10-25 21:21:34] 2025-10-25 19:20:45,471 | INFO     | all payload control threads have been joined
[2025-10-25 21:21:34] 2025-10-25 19:20:45,596 | INFO     | [job] retrieve thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:45,629 | INFO     | all job control threads have been joined
[2025-10-25 21:21:34] 2025-10-25 19:20:45,776 | INFO     | [job] validate thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:45,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 21:21:34] 2025-10-25 19:20:45,886 | INFO     | [payload] validate_post thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:46,026 | INFO     | [job] job monitor thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:46,104 | INFO     | [data] copytool_in thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:46,169 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:46,334 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:46,430 | INFO     | [data] control thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:46,474 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:46,476 | INFO     | [payload] control thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:46,603 | INFO     | [data] copytool_out thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:46,634 | INFO     | [job] control thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:46,949 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:46,979 | INFO     | [payload] failed_post thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:47,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 21:21:34] 2025-10-25 19:20:48,036 | INFO     | [job] queue monitor thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:20:49,830 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 21:21:34] 2025-10-25 19:21:15,383 | INFO     | PID=26287 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-25 21:21:34] 2025-10-25 19:21:15,384 | INFO     | .. there are 9 such processes running
[2025-10-25 21:21:34] 2025-10-25 19:21:15,385 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 21:21:34] 2025-10-25 19:21:15,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 21:21:34] 2025-10-25 19:21:15,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 21:21:34] 2025-10-25 19:21:26,461 | INFO     | [monitor] cgroup control has ended
[2025-10-25 21:21:34] 2025-10-25 19:21:27,466 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139654491907904)>', '<ExcThread(monitor, started 139654049281792)>']
[2025-10-25 21:21:34] 2025-10-25 19:21:28,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 21:21:34] 2025-10-25 19:21:28,469 | INFO     | [monitor] control thread has ended
[2025-10-25 21:21:34] 2025-10-25 19:21:32,491 | INFO     | all workflow threads have been joined
[2025-10-25 21:21:34] 2025-10-25 19:21:32,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 21:21:34] 2025-10-25 19:21:32,492 | INFO     | traces error code: 0
[2025-10-25 21:21:34] 2025-10-25 19:21:32,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 21:21:34] 2025-10-25 19:21:32,820 [wrapper] ==== pilot stdout END ====
[2025-10-25 21:21:34] 2025-10-25 19:21:32,852 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 21:21:34] 2025-10-25 19:21:32,926 [wrapper] pilotpid: 26287
[2025-10-25 21:21:34] 2025-10-25 19:21:32,996 [wrapper] Pilot exit status: 0
[2025-10-25 21:21:34] 2025-10-25 19:21:33,142 [wrapper] pandaids: 6855927545
[2025-10-25 21:21:34] 2025-10-25 19:21:33,431 [wrapper] cleanup supervisor_pilot 19623 26288
[2025-10-25 21:21:34] 2025-10-25 19:21:33,456 [wrapper] Test setup, not cleaning
[2025-10-25 21:21:34] 2025-10-25 19:21:33,482 [wrapper] apfmon messages muted
[2025-10-25 21:21:34] 2025-10-25 19:21:33,512 [wrapper] ==== wrapper stdout END ====
[2025-10-25 21:21:34] 2025-10-25 19:21:33,550 [wrapper] ==== wrapper stderr END ====
[2025-10-25 21:21:34]  *** Error codes and diagnostics ***
[2025-10-25 21:21:34]     "exeErrorCode": 0,
[2025-10-25 21:21:34]     "exeErrorDiag": "",
[2025-10-25 21:21:34]     "pilotErrorCode": 0,
[2025-10-25 21:21:34]     "pilotErrorDiag": "",
[2025-10-25 21:21:34]  *** Listing of results directory ***
[2025-10-25 21:21:34] total 439264
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc    557409 Oct 24 22:36 pilot3.tar.gz
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc      5112 Oct 24 23:28 queuedata.json
[2025-10-25 21:21:34] -rwx------. 1 boinc boinc     36292 Oct 24 23:31 runpilot2-wrapper.sh
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc       100 Oct 25 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 21:21:34] -rwxr-xr-x. 1 boinc boinc      7986 Oct 25 16:30 run_atlas
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc       105 Oct 25 16:30 job.xml
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc      6391 Oct 25 16:30 init_data.xml
[2025-10-25 21:21:34] -rw-r--r--. 2 boinc boinc 227794023 Oct 25 16:30 EVNT.46771634._004993.pool.root.1
[2025-10-25 21:21:34] -rw-r--r--. 2 boinc boinc     15120 Oct 25 16:30 start_atlas.sh
[2025-10-25 21:21:34] drwxrwx--x. 2 boinc boinc        68 Oct 25 16:30 shared
[2025-10-25 21:21:34] -rw-r--r--. 2 boinc boinc    569690 Oct 25 16:30 input.tar.gz
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc         0 Oct 25 16:30 boinc_lockfile
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc      2562 Oct 25 16:30 pandaJob.out
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc    978288 Oct 25 16:30 agis_schedconf.cvmfs.json
[2025-10-25 21:21:34] drwx------. 5 boinc boinc      4096 Oct 25 16:30 pilot3
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc 212443390 Oct 25 21:18 HITS.46771637._125143.pool.root.1
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc       531 Oct 25 21:18 boinc_task_state.xml
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc      1021 Oct 25 21:19 memory_monitor_summary.json
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc   1560772 Oct 25 21:19 agis_ddmendpoints.agis.ALL.json
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc    513189 Oct 25 21:19 log.46771637._125143.job.log.tgz.1
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc      7787 Oct 25 21:20 heartbeat.json
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc        95 Oct 25 21:21 pilot_heartbeat.json
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc      8192 Oct 25 21:21 boinc_mmap_file
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc        28 Oct 25 21:21 wrapper_checkpoint.txt
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc      5071 Oct 25 21:21 pilotlog.txt
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc   2324836 Oct 25 21:21 log.46771637._125143.job.log.1
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc       357 Oct 25 21:21 output.list
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc       620 Oct 25 21:21 runtime_log
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc   2856960 Oct 25 21:21 result.tar.gz
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc      8717 Oct 25 21:21 runtime_log.err
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc       656 Oct 25 21:21 HujLDmBZeW8n9Rq4apOajLDm4fhM0noT9bVof3QYDm7CmMDmozzZPo.diag
[2025-10-25 21:21:34] -rw-r--r--. 1 boinc boinc     20622 Oct 25 21:21 stderr.txt
[2025-10-25 21:21:34] HITS file was successfully produced:
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc 212443390 Oct 25 21:18 shared/HITS.pool.root.1
[2025-10-25 21:21:34]  *** Contents of shared directory: ***
[2025-10-25 21:21:34] total 433292
[2025-10-25 21:21:34] -rw-r--r--. 2 boinc boinc 227794023 Oct 25 16:30 ATLAS.root_0
[2025-10-25 21:21:34] -rw-r--r--. 2 boinc boinc     15120 Oct 25 16:30 start_atlas.sh
[2025-10-25 21:21:34] -rw-r--r--. 2 boinc boinc    569690 Oct 25 16:30 input.tar.gz
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc 212443390 Oct 25 21:18 HITS.pool.root.1
[2025-10-25 21:21:34] -rw-------. 1 boinc boinc   2856960 Oct 25 21:21 result.tar.gz
21:21:35 (20606): run_atlas exited; CPU time 62097.382784
21:21:35 (20606): called boinc_finish(0)

</stderr_txt>
]]>

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