Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
20:01:31 (65782): wrapper (7.7.26015): starting
20:01:31 (65782): wrapper: running run_atlas (--nthreads 4)
[2025-10-24 20:01:31] Arguments: --nthreads 4
[2025-10-24 20:01:31] Threads: 4
[2025-10-24 20:01:31] Checking for CVMFS
[2025-10-24 20:01:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 20:01:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 20:01:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 20:01:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 20:01:31] 2.13.2.0 5804 11 45824 152103 0 188 2110408 4096001 916 130560 0 152212 99.999 69 74 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-24 20:01:31] CVMFS is ok
[2025-10-24 20:01:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 20:01:31] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-24 20:01:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-24 20:01:31] Further information can be found at the LHC@home message board.
[2025-10-24 20:01:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 20:01:31] Checking for apptainer binary...
[2025-10-24 20:01:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 20:01:31] Running /usr/bin/apptainer --version
[2025-10-24 20:01:31] apptainer version 1.4.2
[2025-10-24 20:01:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 20:01:31] 3950x-linux
[2025-10-24 20:01:31] apptainer works
[2025-10-24 20:01:31] Set ATHENA_PROC_NUMBER=4
[2025-10-24 20:01:31] Set ATHENA_CORE_NUMBER=4
[2025-10-24 20:01:31] Starting ATLAS job with PandaID=6856128807
[2025-10-24 20:01:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc202/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 21:42:01]  *** The last 200 lines of the pilot log: ***
[2025-10-24 21:42:01]  workdir=None
[2025-10-24 21:42:01] ]
[2025-10-24 21:42:01] 2025-10-25 04:41:24,797 | INFO     | transferring file log.46771637._125640.job.log.tgz.1 from /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856128807/log.46771637._125640.job.log.tgz.1 to /var/li
[2025-10-24 21:42:01] 2025-10-25 04:41:24,797 | INFO     | executing command: /usr/bin/env mv /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856128807/log.46771637._125640.job.log.tgz.1 /var/lib/multiboinc/boinc202/slot
[2025-10-24 21:42:01] 2025-10-25 04:41:24,810 | INFO     | adding to output.list: log.46771637._125640.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/6c/log.46771637._125640.job.log.tg
[2025-10-24 21:42:01] 2025-10-25 04:41:24,810 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-24 21:42:01] 2025-10-25 04:41:24,810 | INFO     | summary of transferred files:
[2025-10-24 21:42:01] 2025-10-25 04:41:24,810 | INFO     |  -- lfn=log.46771637._125640.job.log.tgz.1, status_code=0, status=transferred
[2025-10-24 21:42:01] 2025-10-25 04:41:24,810 | INFO     | stage-out finished correctly
[2025-10-24 21:42:01] 2025-10-25 04:41:25,289 | INFO     | PID=69700 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-24 21:42:01] 2025-10-25 04:41:26,000 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-24 21:42:01] 2025-10-25 04:41:26,046 | INFO     | job 6856128807 has state=finished
[2025-10-24 21:42:01] 2025-10-25 04:41:26,047 | INFO     | preparing for final server update for job 6856128807 in state='finished'
[2025-10-24 21:42:01] 2025-10-25 04:41:26,047 | INFO     | this job has now completed (state=finished)
[2025-10-24 21:42:01] 2025-10-25 04:41:26,047 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-24 21:42:01] 2025-10-25 04:41:26,047 | INFO     | log transfer has been attempted: DONE
[2025-10-24 21:42:01] 2025-10-25 04:41:26,047 | INFO     | job 6856128807 has finished - writing final server update
[2025-10-24 21:42:01] 2025-10-25 04:41:26,047 | INFO     | total number of processed events: 400 (read)
[2025-10-24 21:42:01] 2025-10-25 04:41:26,048 | INFO     | executing command: lscpu
[2025-10-24 21:42:01] 2025-10-25 04:41:26,068 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-24 21:42:01] 2025-10-25 04:41:26,290 | INFO     | time since job start (5987s) is within the limit (172800.0s)
[2025-10-24 21:42:01] 2025-10-25 04:41:28,295 | INFO     | time since job start (5989s) is within the limit (172800.0s)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,113 | WARNING  | process 76343 can no longer be monitored (due to stat problems) - aborting
[2025-10-24 21:42:01] 2025-10-25 04:41:29,113 | INFO     | using path: /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856128807/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,114 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2717564 B
[2025-10-24 21:42:01] 2025-10-25 04:41:29,114 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15333 B
[2025-10-24 21:42:01] 2025-10-25 04:41:29,114 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc202/slots/1
[2025-10-24 21:42:01] 2025-10-25 04:41:29,304 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 21:42:01] 2025-10-25 04:41:29,311 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2533.4695
[2025-10-24 21:42:01] 2025-10-25 04:41:29,314 | INFO     | sufficient remaining disk space (195739779072 B)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,314 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,315 | INFO     | using path: /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856128807/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,315 | INFO     | extracted standard info from prmon json
[2025-10-24 21:42:01] 2025-10-25 04:41:29,315 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 21:42:01] 2025-10-25 04:41:29,315 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 21:42:01] 2025-10-25 04:41:29,316 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 21:42:01] 2025-10-25 04:41:29,316 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 21:42:01] 2025-10-25 04:41:29,317 | INFO     | fitting pss+swap vs Time
[2025-10-24 21:42:01] 2025-10-25 04:41:29,317 | INFO     | sum of square deviations: 233641590.0
[2025-10-24 21:42:01] 2025-10-25 04:41:29,317 | INFO     | sum of deviations: -3288922543.0
[2025-10-24 21:42:01] 2025-10-25 04:41:29,317 | INFO     | mean x: 1761364369.0
[2025-10-24 21:42:01] 2025-10-25 04:41:29,317 | INFO     | mean y: 2365777.076923077
[2025-10-24 21:42:01] 2025-10-25 04:41:29,317 | INFO     | -- intersect: 24796714161.88748
[2025-10-24 21:42:01] 2025-10-25 04:41:29,317 | INFO     | intersect: 24796714161.88748
[2025-10-24 21:42:01] 2025-10-25 04:41:29,317 | INFO     | chi2: 0.053910820777984016
[2025-10-24 21:42:01] 2025-10-25 04:41:29,317 | INFO     | -- intersect: 24796714161.88748
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | current memory leak: -14.08 B/s (using 91 data points, chi2=0.05)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | could have reported an average CPU frequency of 2887 MHz (7 samples)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | ..............................
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | . Timing measurements:
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | . get job = 0 s
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | . initial setup = 3 s
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | . payload setup = 3 s
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | . stage-in = 0 s
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | . payload execution = 5963 s
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | . stage-out = 0 s
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | . log creation = 0 s
[2025-10-24 21:42:01] 2025-10-25 04:41:29,318 | INFO     | ..............................
[2025-10-24 21:42:01] 2025-10-25 04:41:29,319 | INFO     | size of work directory /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856128807: 3024277 B (within 2537553920 B limit)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,319 | INFO     | pfn file=/var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856128807/HITS.46771637._125640.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,319 | INFO     | total size of present files: 0 B (workdir size: 3024277 B)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,319 | INFO     | output file size check: skipping output file /var/lib/multiboinc/boinc202/slots/1/PanDA_Pilot-6856128807/HITS.46771637._125640.pool.root.1 since it does not exist
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | 
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | job summary report
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | --------------------------------------------------
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | PanDA job id: 6856128807
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | task id: 46771637
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | errors: (none)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | pilot state: finished 
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | transexitcode: 0
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | exeerrorcode: 0
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | exeerrordiag: 
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | exitcode: 0
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | exitmsg: OK
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | cpuconsumptiontime: 23104 s
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | nevents: 400
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | neventsw: 0
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | pid: 76343
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | pgrp: 76343
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | corecount: 4
[2025-10-24 21:42:01] 2025-10-25 04:41:29,369 | INFO     | event service: False
[2025-10-24 21:42:01] 2025-10-25 04:41:29,370 | INFO     | sizes: {0: 2348948, 2: 2349210, 11: 2349238, 5970: 2376060, 5972: 2385086, 5973: 2385142, 5976: 2385492}
[2025-10-24 21:42:01] 2025-10-25 04:41:29,370 | INFO     | --------------------------------------------------
[2025-10-24 21:42:01] 2025-10-25 04:41:29,370 | INFO     | 
[2025-10-24 21:42:01] 2025-10-25 04:41:29,370 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc202/slots/1
[2025-10-24 21:42:01] 2025-10-25 04:41:29,383 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | job 6856128807 has completed (purged errors)
[2025-10-24 21:42:01] 2025-10-25 04:41:29,384 | INFO     | overall cleanup function is called
[2025-10-24 21:42:01] 2025-10-25 04:41:29,473 | INFO     | number of running child processes to parent process 76343: 1
[2025-10-24 21:42:01] 2025-10-25 04:41:29,473 | INFO     | maximum number of monitored processes: 6
[2025-10-24 21:42:01] 2025-10-25 04:41:29,473 | INFO     | aborting job monitoring since job object (job id=6856128807) has expired
[2025-10-24 21:42:01] 2025-10-25 04:41:30,392 | INFO     | --- collectZombieJob: --- 10, [76343]
[2025-10-24 21:42:01] 2025-10-25 04:41:30,392 | INFO     | zombie collector waiting for pid 76343
[2025-10-24 21:42:01] 2025-10-25 04:41:30,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 21:42:01] 2025-10-25 04:41:30,392 | INFO     | collected zombie processes
[2025-10-24 21:42:01] 2025-10-25 04:41:30,392 | INFO     | will attempt to kill all subprocesses of pid=76343
[2025-10-24 21:42:01] 2025-10-25 04:41:30,488 | INFO     | process IDs to be killed: [76343] (in reverse order)
[2025-10-24 21:42:01] 2025-10-25 04:41:30,528 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 21:42:01] 2025-10-25 04:41:30,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 21:42:01] 2025-10-25 04:41:30,531 | INFO     | did not find any defunct processes belonging to 76343
[2025-10-24 21:42:01] 2025-10-25 04:41:30,533 | INFO     | did not find any defunct processes belonging to 76343
[2025-10-24 21:42:01] 2025-10-25 04:41:30,534 | INFO     | ready for new job
[2025-10-24 21:42:01] 2025-10-25 04:41:30,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 21:42:01] 2025-10-25 04:41:30,535 | INFO     | ***************************************
[2025-10-24 21:42:01] 2025-10-25 04:41:30,535 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 21:42:01] 2025-10-25 04:41:30,535 | INFO     | ***************************************
[2025-10-24 21:42:01] 2025-10-25 04:41:30,535 | INFO     | 
[2025-10-24 21:42:01] 2025-10-25 04:41:30,536 | INFO     | architecture information:
[2025-10-24 21:42:01] 2025-10-25 04:41:30,536 | INFO     | executing command: cat /etc/os-release
[2025-10-24 21:42:01] 2025-10-25 04:41:30,546 | INFO     | cat /etc/os-release:
[2025-10-24 21:42:01] NAME="CentOS Linux"
[2025-10-24 21:42:01] VERSION="7 (Core)"
[2025-10-24 21:42:01] ID="centos"
[2025-10-24 21:42:01] ID_LIKE="rhel fedora"
[2025-10-24 21:42:01] VERSION_ID="7"
[2025-10-24 21:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 21:42:01] ANSI_COLOR="0;31"
[2025-10-24 21:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 21:42:01] HOME_URL="https://www.centos.org/"
[2025-10-24 21:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 21:42:01] 
[2025-10-24 21:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 21:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 21:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 21:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 21:42:01] 
[2025-10-24 21:42:01] 2025-10-25 04:41:30,546 | INFO     | ***************************************
[2025-10-24 21:42:01] 2025-10-25 04:41:31,049 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc202/slots/1
[2025-10-24 21:42:01] 2025-10-25 04:41:31,059 | INFO     | sufficient remaining disk space (195743973376 B)
[2025-10-24 21:42:01] 2025-10-25 04:41:31,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 21:42:01] 2025-10-25 04:41:31,060 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 21:42:01] 2025-10-25 04:41:31,060 | INFO     | update_server=False
[2025-10-24 21:42:01] 2025-10-25 04:41:31,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 21:42:01] 2025-10-25 04:41:31,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 21:42:01] 2025-10-25 04:41:31,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 21:42:01] 2025-10-25 04:41:31,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 21:42:01] 2025-10-25 04:41:31,060 | INFO     | aborting loop
[2025-10-24 21:42:01] 2025-10-25 04:41:31,903 | INFO     | all data control threads have been joined
[2025-10-24 21:42:01] 2025-10-25 04:41:32,052 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 21:42:01] 2025-10-25 04:41:32,063 | INFO     | [job] queue monitor thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:32,065 | INFO     | [job] retrieve thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:32,066 | INFO     | [job] job monitor thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:32,158 | INFO     | [payload] validate_post thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:32,276 | INFO     | all payload control threads have been joined
[2025-10-24 21:42:01] 2025-10-25 04:41:32,321 | INFO     | [payload] failed_post thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:32,465 | INFO     | all job control threads have been joined
[2025-10-24 21:42:01] 2025-10-25 04:41:32,567 | INFO     | [data] copytool_in thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:32,904 | INFO     | [job] validate thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:32,909 | INFO     | [data] control thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:32,942 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:33,062 | INFO     | [data] copytool_out thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:33,069 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:33,109 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:33,282 | INFO     | [payload] control thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:33,471 | INFO     | [job] control thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:36,059 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:41,702 | INFO     | job.realtimelogging is not enabled
[2025-10-24 21:42:01] 2025-10-25 04:41:42,708 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 21:42:01] 2025-10-25 04:41:47,224 | INFO     | [monitor] cgroup control has ended
[2025-10-24 21:42:01] 2025-10-25 04:41:47,354 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123666429413184)>', '<ExcThread(monitor, started 123665622476544)>']
[2025-10-24 21:42:01] 2025-10-25 04:41:52,362 | INFO     | all workflow threads have been joined
[2025-10-24 21:42:01] 2025-10-25 04:41:52,374 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 21:42:01] 2025-10-25 04:41:52,374 | INFO     | traces error code: 0
[2025-10-24 21:42:01] 2025-10-25 04:41:52,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 21:42:01] 2025-10-25 04:42:01,468 | INFO     | PID=69700 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-24 21:42:01] 2025-10-25 04:42:01,468 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 21:42:01] 2025-10-25 04:42:01,468 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 21:42:01] 2025-10-25 04:42:01,468 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 21:42:01] 2025-10-25 04:42:01,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 21:42:01] 2025-10-25 04:42:01,468 | INFO     | [monitor] control thread has ended
[2025-10-24 21:42:01] 2025-10-25 04:42:01,522 [wrapper] ==== pilot stdout END ====
[2025-10-24 21:42:01] 2025-10-25 04:42:01,524 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 21:42:01] 2025-10-25 04:42:01,526 [wrapper] pilotpid: 69700
[2025-10-24 21:42:01] 2025-10-25 04:42:01,528 [wrapper] Pilot exit status: 0
[2025-10-24 21:42:01] 2025-10-25 04:42:01,535 [wrapper] pandaids: 6856128807
[2025-10-24 21:42:01] 2025-10-25 04:42:01,560 [wrapper] cleanup supervisor_pilot  141210 69701
[2025-10-24 21:42:01] 2025-10-25 04:42:01,562 [wrapper] Test setup, not cleaning
[2025-10-24 21:42:01] 2025-10-25 04:42:01,564 [wrapper] apfmon messages muted
[2025-10-24 21:42:01] 2025-10-25 04:42:01,566 [wrapper] ==== wrapper stdout END ====
[2025-10-24 21:42:01] 2025-10-25 04:42:01,568 [wrapper] ==== wrapper stderr END ====
[2025-10-24 21:42:01]  *** Error codes and diagnostics ***
[2025-10-24 21:42:01]     "exeErrorCode": 0,
[2025-10-24 21:42:01]     "exeErrorDiag": "",
[2025-10-24 21:42:01]     "pilotErrorCode": 0,
[2025-10-24 21:42:01]     "pilotErrorDiag": "",
[2025-10-24 21:42:01]  *** Listing of results directory ***
[2025-10-24 21:42:01] total 434560
[2025-10-24 21:42:01] -rw-r--r-- 1 root root    557409 Oct 24 14:37 pilot3.tar.gz
[2025-10-24 21:42:01] -rwx------ 1 4871 1028     36292 Oct 24 15:13 runpilot2-wrapper.sh
[2025-10-24 21:42:01] -rw-r--r-- 1 root root      5112 Oct 24 15:13 queuedata.json
[2025-10-24 21:42:01] -rw-r--r-- 1 root root       100 Oct 24 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 21:42:01] -rwxr-xr-x 1 root root      7986 Oct 24 20:01 run_atlas
[2025-10-24 21:42:01] -rw-r--r-- 1 root root       105 Oct 24 20:01 job.xml
[2025-10-24 21:42:01] -rw-r--r-- 2 root root 226647633 Oct 24 20:01 EVNT.46771634._005005.pool.root.1
[2025-10-24 21:42:01] -rw-r--r-- 2 root root    569685 Oct 24 20:01 input.tar.gz
[2025-10-24 21:42:01] -rw-r--r-- 2 root root     15120 Oct 24 20:01 start_atlas.sh
[2025-10-24 21:42:01] drwxrwx--x 2 root root      4096 Oct 24 20:01 shared
[2025-10-24 21:42:01] -rw-r--r-- 1 root root         0 Oct 24 20:01 boinc_setup_complete
[2025-10-24 21:42:01] -rw-r--r-- 1 root root         0 Oct 24 20:01 boinc_lockfile
[2025-10-24 21:42:01] -rw-r--r-- 1 root root      2561 Oct 24 20:01 pandaJob.out
[2025-10-24 21:42:01] -rw------- 1 root root    978597 Oct 24 20:01 agis_schedconf.cvmfs.json
[2025-10-24 21:42:01] -rw------- 1 root root   1560772 Oct 24 20:01 agis_ddmendpoints.agis.ALL.json
[2025-10-24 21:42:01] drwxr-xr-x 5  320  320      4096 Oct 24 20:01 pilot3
[2025-10-24 21:42:01] -rw-r--r-- 1 root root      7444 Oct 24 20:19 init_data.xml
[2025-10-24 21:42:01] -rw-r--r-- 1 root root      2123 Oct 24 20:21 temp.txt
[2025-10-24 21:42:01] -rw------- 1 root root 212072082 Oct 24 21:40 HITS.46771637._125640.pool.root.1
[2025-10-24 21:42:01] -rw------- 1 root root      1018 Oct 24 21:41 memory_monitor_summary.json
[2025-10-24 21:42:01] -rw-r--r-- 1 root root       529 Oct 24 21:41 boinc_task_state.xml
[2025-10-24 21:42:01] -rw------- 1 root root        95 Oct 24 21:41 pilot_heartbeat.json
[2025-10-24 21:42:01] -rw------- 1 root root    294937 Oct 24 21:41 log.46771637._125640.job.log.tgz.1
[2025-10-24 21:42:01] -rw------- 1 root root      7744 Oct 24 21:41 heartbeat.json
[2025-10-24 21:42:01] -rw-r--r-- 1 root root        27 Oct 24 21:41 wrapper_checkpoint.txt
[2025-10-24 21:42:01] -rw-r--r-- 1 root root      8192 Oct 24 21:41 boinc_mmap_file
[2025-10-24 21:42:01] -rw------- 1 root root       745 Oct 24 21:42 pilotlog.txt
[2025-10-24 21:42:01] -rw------- 1 root root    887572 Oct 24 21:42 log.46771637._125640.job.log.1
[2025-10-24 21:42:01] -rw------- 1 root root       357 Oct 24 21:42 output.list
[2025-10-24 21:42:01] -rw-r--r-- 1 root root       620 Oct 24 21:42 runtime_log
[2025-10-24 21:42:01] -rw------- 1 root root   1198080 Oct 24 21:42 result.tar.gz
[2025-10-24 21:42:01] -rw-r--r-- 1 root root      8876 Oct 24 21:42 runtime_log.err
[2025-10-24 21:42:01] -rw------- 1 root root       648 Oct 24 21:42 aPDMDmBDfW8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3HmMDmVgNrXo.diag
[2025-10-24 21:42:01] -rw-r--r-- 1 root root     22735 Oct 24 21:42 stderr.txt
[2025-10-24 21:42:01] HITS file was successfully produced:
[2025-10-24 21:42:01] -rw------- 1 root root 212072082 Oct 24 21:40 shared/HITS.pool.root.1
[2025-10-24 21:42:01]  *** Contents of shared directory: ***
[2025-10-24 21:42:01] total 430196
[2025-10-24 21:42:01] -rw-r--r-- 2 root root 226647633 Oct 24 20:01 ATLAS.root_0
[2025-10-24 21:42:01] -rw-r--r-- 2 root root    569685 Oct 24 20:01 input.tar.gz
[2025-10-24 21:42:01] -rw-r--r-- 2 root root     15120 Oct 24 20:01 start_atlas.sh
[2025-10-24 21:42:01] -rw------- 1 root root 212072082 Oct 24 21:40 HITS.pool.root.1
[2025-10-24 21:42:01] -rw------- 1 root root   1198080 Oct 24 21:42 result.tar.gz
21:42:03 (65782): run_atlas exited; CPU time 23146.908925
21:42:03 (65782): called boinc_finish(0)

</stderr_txt>
]]>

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