Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:08:44 (3653919): wrapper (7.7.26015): starting
15:08:44 (3653919): wrapper: running run_atlas (--nthreads 4)
[2025-10-25 15:08:44] Arguments: --nthreads 4
[2025-10-25 15:08:44] Threads: 4
[2025-10-25 15:08:44] Checking for CVMFS
[2025-10-25 15:08:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 15:08:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 15:08:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 15:08:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 15:08:45] 2.9.2.0 1545554 6587 97208 152118 2 57 31321560 36864001 0 130560 0 5430219 99.990 246804 1051 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-25 15:08:45] CVMFS is ok
[2025-10-25 15:08:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 15:08:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 15:08:45] Further information can be found at the LHC@home message board.
[2025-10-25 15:08:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 15:08:45] Checking for apptainer binary...
[2025-10-25 15:08:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 15:08:45] Running /usr/bin/apptainer --version
[2025-10-25 15:08:45] apptainer version 1.4.1-1.1
[2025-10-25 15:08:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 15:08:45] thA309
[2025-10-25 15:08:45] apptainer works
[2025-10-25 15:08:45] Set ATHENA_PROC_NUMBER=4
[2025-10-25 15:08:45] Set ATHENA_CORE_NUMBER=4
[2025-10-25 15:08:45] Starting ATLAS job with PandaID=6856222866
[2025-10-25 15:08:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 16:29:05]  *** The last 200 lines of the pilot log: ***
[2025-10-25 16:29:05] 2025-10-25 14:28:04,419 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 16:29:05] 2025-10-25 14:28:04,420 | INFO     | aborting loop
[2025-10-25 16:29:05] 2025-10-25 14:28:04,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 16:29:05] 2025-10-25 14:28:04,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 16:29:05] 2025-10-25 14:28:04,512 | INFO     | all job control threads have been joined
[2025-10-25 16:29:05] 2025-10-25 14:28:04,909 | INFO     | all payload control threads have been joined
[2025-10-25 16:29:05] 2025-10-25 14:28:05,306 | INFO     | all data control threads have been joined
[2025-10-25 16:29:05] 2025-10-25 14:28:05,425 | INFO     | [job] retrieve thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:05,425 | INFO     | [job] job monitor thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:05,426 | INFO     | [job] queue monitor thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:05,512 | INFO     | [job] control thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:05,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 16:29:05] 2025-10-25 14:28:05,746 | INFO     | [payload] failed_post thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:05,915 | INFO     | [payload] control thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:05,915 | INFO     | [job] validate thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:06,036 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:06,036 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:06,109 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:06,312 | INFO     | [data] control thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:06,667 | INFO     | [data] copytool_in thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:06,752 | INFO     | [payload] validate_post thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:07,534 | INFO     | [data] copytool_out thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:08,427 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:14,719 | INFO     | job.realtimelogging is not enabled
[2025-10-25 16:29:05] 2025-10-25 14:28:15,725 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 16:29:05] 2025-10-25 14:28:34,130 | INFO     | PID=3657711 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-25 16:29:05] 2025-10-25 14:28:34,130 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 16:29:05] 2025-10-25 14:28:34,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 16:29:05] 2025-10-25 14:28:34,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 16:29:05] 2025-10-25 14:28:58,880 | INFO     | [monitor] cgroup control has ended
[2025-10-25 16:29:05] 2025-10-25 14:29:00,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698327586624)>', '<ExcThread(monitor, started 139697158350592)>']
[2025-10-25 16:29:05] 2025-10-25 14:29:00,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 16:29:05] 2025-10-25 14:29:00,269 | INFO     | [monitor] control thread has ended
[2025-10-25 16:29:05] 2025-10-25 14:29:05,280 | INFO     | all workflow threads have been joined
[2025-10-25 16:29:05] 2025-10-25 14:29:05,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 16:29:05] 2025-10-25 14:29:05,281 | INFO     | traces error code: 0
[2025-10-25 16:29:05] 2025-10-25 14:29:05,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 16:29:05] 2025-10-25 14:29:05,365 [wrapper] ==== pilot stdout END ====
[2025-10-25 16:29:05] 2025-10-25 14:29:05,369 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 16:29:05] 2025-10-25 14:29:05,373 [wrapper] pilotpid: 3657711
[2025-10-25 16:29:05] 2025-10-25 14:29:05,377 [wrapper] Pilot exit status: 0
[2025-10-25 16:29:05] 2025-10-25 14:29:05,389 [wrapper] pandaids: 6856222866
[2025-10-25 16:29:05] 2025-10-25 14:29:05,414 [wrapper] cleanup supervisor_pilot 3676914 3657712
[2025-10-25 16:29:05] 2025-10-25 14:29:05,418 [wrapper] Test setup, not cleaning
[2025-10-25 16:29:05] 2025-10-25 14:29:05,422 [wrapper] apfmon messages muted
[2025-10-25 16:29:05] 2025-10-25 14:29:05,426 [wrapper] ==== wrapper stdout END ====
[2025-10-25 16:29:05] 2025-10-25 14:29:05,430 [wrapper] ==== wrapper stderr END ====
[2025-10-25 16:29:05]  *** Error codes and diagnostics ***
[2025-10-25 16:29:05]     "exeErrorCode": 0,
[2025-10-25 16:29:05]     "exeErrorDiag": "",
[2025-10-25 16:29:05]     "pilotErrorCode": 0,
[2025-10-25 16:29:05]     "pilotErrorDiag": "",
[2025-10-25 16:29:05]  *** Listing of results directory ***
[2025-10-25 16:29:05] total 431728
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc    557409 Oct 25 01:40 pilot3.tar.gz
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc      5112 Oct 25 02:12 queuedata.json
[2025-10-25 16:29:05] -rwx------ 1 boinc boinc     36292 Oct 25 02:14 runpilot2-wrapper.sh
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc       100 Oct 25 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 16:29:05] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 15:08 run_atlas
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc       105 Oct 25 15:08 job.xml
[2025-10-25 16:29:05] -rw-r--r-- 2 boinc boinc 227795413 Oct 25 15:08 EVNT.46771634._005089.pool.root.1
[2025-10-25 16:29:05] -rw-r--r-- 2 boinc boinc    569691 Oct 25 15:08 input.tar.gz
[2025-10-25 16:29:05] drwxrwx--x 2 boinc boinc      4096 Oct 25 15:08 shared
[2025-10-25 16:29:05] -rw-r--r-- 2 boinc boinc     15120 Oct 25 15:08 start_atlas.sh
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc         0 Oct 25 15:08 boinc_setup_complete
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc      6377 Oct 25 15:08 init_data.xml
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc         0 Oct 25 15:08 boinc_lockfile
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc      2562 Oct 25 15:08 pandaJob.out
[2025-10-25 16:29:05] -rw------- 1 boinc boinc    978288 Oct 25 15:08 agis_schedconf.cvmfs.json
[2025-10-25 16:29:05] -rw------- 1 boinc boinc   1560772 Oct 25 15:08 agis_ddmendpoints.agis.ALL.json
[2025-10-25 16:29:05] drwx------ 5 boinc boinc      4096 Oct 25 15:08 pilot3
[2025-10-25 16:29:05] -rw------- 1 boinc boinc 208481181 Oct 25 16:27 HITS.46771637._127674.pool.root.1
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc       529 Oct 25 16:27 boinc_task_state.xml
[2025-10-25 16:29:05] -rw------- 1 boinc boinc      1032 Oct 25 16:27 memory_monitor_summary.json
[2025-10-25 16:29:05] -rw------- 1 boinc boinc    260620 Oct 25 16:27 log.46771637._127674.job.log.tgz.1
[2025-10-25 16:29:05] -rw------- 1 boinc boinc      7759 Oct 25 16:28 heartbeat.json
[2025-10-25 16:29:05] -rw------- 1 boinc boinc        95 Oct 25 16:28 pilot_heartbeat.json
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc      8192 Oct 25 16:28 boinc_mmap_file
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc        27 Oct 25 16:28 wrapper_checkpoint.txt
[2025-10-25 16:29:05] -rw------- 1 boinc boinc      4824 Oct 25 16:29 pilotlog.txt
[2025-10-25 16:29:05] -rw------- 1 boinc boinc    699700 Oct 25 16:29 log.46771637._127674.job.log.1
[2025-10-25 16:29:05] -rw------- 1 boinc boinc       357 Oct 25 16:29 output.list
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc       620 Oct 25 16:29 runtime_log
[2025-10-25 16:29:05] -rw------- 1 boinc boinc    983040 Oct 25 16:29 result.tar.gz
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc      8777 Oct 25 16:29 runtime_log.err
[2025-10-25 16:29:05] -rw------- 1 boinc boinc       658 Oct 25 16:29 fJtKDms6gW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGZmMDmwIC22n.diag
[2025-10-25 16:29:05] -rw-r--r-- 1 boinc boinc      7289 Oct 25 16:29 stderr.txt
[2025-10-25 16:29:05] HITS file was successfully produced:
[2025-10-25 16:29:05] -rw------- 1 boinc boinc 208481181 Oct 25 16:27 shared/HITS.pool.root.1
[2025-10-25 16:29:05]  *** Contents of shared directory: ***
[2025-10-25 16:29:05] total 427600
[2025-10-25 16:29:05] -rw-r--r-- 2 boinc boinc 227795413 Oct 25 15:08 ATLAS.root_0
[2025-10-25 16:29:05] -rw-r--r-- 2 boinc boinc    569691 Oct 25 15:08 input.tar.gz
[2025-10-25 16:29:05] -rw-r--r-- 2 boinc boinc     15120 Oct 25 15:08 start_atlas.sh
[2025-10-25 16:29:05] -rw------- 1 boinc boinc 208481181 Oct 25 16:27 HITS.pool.root.1
[2025-10-25 16:29:05] -rw------- 1 boinc boinc    983040 Oct 25 16:29 result.tar.gz
16:29:07 (3653919): run_atlas exited; CPU time 17897.101839
16:29:07 (3653919): called boinc_finish(0)

</stderr_txt>
]]>

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