Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:24:32 (1834213): wrapper (7.7.26015): starting
13:24:32 (1834213): wrapper: running run_atlas (--nthreads 4)
[2025-10-25 13:24:32] Arguments: --nthreads 4
[2025-10-25 13:24:32] Threads: 4
[2025-10-25 13:24:32] Checking for CVMFS
[2025-10-25 13:24:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 13:24:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 13:24:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 13:24:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 13:24:32] 2.9.2.0 3052 5584 99128 152117 0 56 32120597 36864000 0 130560 0 4755203 99.990 214489 907 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-25 13:24:32] CVMFS is ok
[2025-10-25 13:24:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 13:24:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 13:24:32] Further information can be found at the LHC@home message board.
[2025-10-25 13:24:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 13:24:32] Checking for apptainer binary...
[2025-10-25 13:24:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 13:24:32] Running /usr/bin/apptainer --version
[2025-10-25 13:24:32] apptainer version 1.4.1-1.1
[2025-10-25 13:24:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 13:24:32] thA334
[2025-10-25 13:24:32] apptainer works
[2025-10-25 13:24:32] Set ATHENA_PROC_NUMBER=4
[2025-10-25 13:24:32] Set ATHENA_CORE_NUMBER=4
[2025-10-25 13:24:32] Starting ATLAS job with PandaID=6858144636
[2025-10-25 13:24:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 14:52:51]  *** The last 200 lines of the pilot log: ***
[2025-10-25 14:52:51] 2025-10-25 12:52:04,901 | INFO     | [job] retrieve thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:04,901 | INFO     | [job] queue monitor thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:05,100 | INFO     | [payload] failed_post thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:05,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:05,268 | INFO     | [payload] control thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:05,619 | INFO     | [payload] validate_post thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:05,719 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 14:52:51] 2025-10-25 12:52:05,804 | INFO     | [job] control thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:05,840 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:05,901 | INFO     | [data] copytool_out thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:05,905 | INFO     | [data] control thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:05,924 | INFO     | [job] validate thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:06,008 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:06,094 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:06,367 | INFO     | [data] copytool_in thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:09,726 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 14:52:51] 2025-10-25 12:52:33,490 | INFO     | PID=1837999 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-25 14:52:51] 2025-10-25 12:52:33,490 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 14:52:51] 2025-10-25 12:52:33,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 14:52:51] 2025-10-25 12:52:33,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 14:52:51] 2025-10-25 12:52:45,636 | INFO     | [monitor] cgroup control has ended
[2025-10-25 14:52:51] 2025-10-25 12:52:46,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359053657920)>', '<ExcThread(monitor, started 140358541350656)>']
[2025-10-25 14:52:51] 2025-10-25 12:52:46,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 14:52:51] 2025-10-25 12:52:46,560 | INFO     | [monitor] control thread has ended
[2025-10-25 14:52:51] 2025-10-25 12:52:51,261 | INFO     | all workflow threads have been joined
[2025-10-25 14:52:51] 2025-10-25 12:52:51,262 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 14:52:51] 2025-10-25 12:52:51,262 | INFO     | traces error code: 0
[2025-10-25 14:52:51] 2025-10-25 12:52:51,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 14:52:51] 2025-10-25 12:52:51,332 [wrapper] ==== pilot stdout END ====
[2025-10-25 14:52:51] 2025-10-25 12:52:51,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 14:52:51] 2025-10-25 12:52:51,339 [wrapper] pilotpid: 1837999
[2025-10-25 14:52:51] 2025-10-25 12:52:51,343 [wrapper] Pilot exit status: 0
[2025-10-25 14:52:51] 2025-10-25 12:52:51,354 [wrapper] pandaids: 6858144636
[2025-10-25 14:52:51] 2025-10-25 12:52:51,376 [wrapper] cleanup supervisor_pilot 1856753 1838000
[2025-10-25 14:52:51] 2025-10-25 12:52:51,379 [wrapper] Test setup, not cleaning
[2025-10-25 14:52:51] 2025-10-25 12:52:51,383 [wrapper] apfmon messages muted
[2025-10-25 14:52:51] 2025-10-25 12:52:51,386 [wrapper] ==== wrapper stdout END ====
[2025-10-25 14:52:51] 2025-10-25 12:52:51,389 [wrapper] ==== wrapper stderr END ====
[2025-10-25 14:52:51]  *** Error codes and diagnostics ***
[2025-10-25 14:52:51]     "exeErrorCode": 0,
[2025-10-25 14:52:51]     "exeErrorDiag": "",
[2025-10-25 14:52:51]     "pilotErrorCode": 0,
[2025-10-25 14:52:51]     "pilotErrorDiag": "",
[2025-10-25 14:52:51]  *** Listing of results directory ***
[2025-10-25 14:52:51] total 463888
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc    557409 Oct 24 21:36 pilot3.tar.gz
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc      5112 Oct 24 22:08 queuedata.json
[2025-10-25 14:52:51] -rwx------ 1 boinc boinc     36292 Oct 24 22:11 runpilot2-wrapper.sh
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc       100 Oct 25 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 14:52:51] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 13:24 run_atlas
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc       105 Oct 25 13:24 job.xml
[2025-10-25 14:52:51] -rw-r--r-- 2 boinc boinc 275213876 Oct 25 13:24 EVNT.46965009._000013.pool.root.1
[2025-10-25 14:52:51] -rw-r--r-- 2 boinc boinc    569706 Oct 25 13:24 input.tar.gz
[2025-10-25 14:52:51] -rw-r--r-- 2 boinc boinc     15120 Oct 25 13:24 start_atlas.sh
[2025-10-25 14:52:51] drwxrwx--x 2 boinc boinc      4096 Oct 25 13:24 shared
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc         0 Oct 25 13:24 boinc_setup_complete
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc      6368 Oct 25 13:24 init_data.xml
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc         0 Oct 25 13:24 boinc_lockfile
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc      2649 Oct 25 13:24 pandaJob.out
[2025-10-25 14:52:51] -rw------- 1 boinc boinc    978288 Oct 25 13:24 agis_schedconf.cvmfs.json
[2025-10-25 14:52:51] -rw------- 1 boinc boinc   1560772 Oct 25 13:24 agis_ddmendpoints.agis.ALL.json
[2025-10-25 14:52:51] drwx------ 5 boinc boinc      4096 Oct 25 13:24 pilot3
[2025-10-25 14:52:51] -rw------- 1 boinc boinc 193863213 Oct 25 14:51 HITS.46965017._000306.pool.root.1
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc       529 Oct 25 14:51 boinc_task_state.xml
[2025-10-25 14:52:51] -rw------- 1 boinc boinc      1019 Oct 25 14:51 memory_monitor_summary.json
[2025-10-25 14:52:51] -rw------- 1 boinc boinc    263457 Oct 25 14:51 log.46965017._000306.job.log.tgz.1
[2025-10-25 14:52:51] -rw------- 1 boinc boinc      7756 Oct 25 14:52 heartbeat.json
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc        27 Oct 25 14:52 wrapper_checkpoint.txt
[2025-10-25 14:52:51] -rw------- 1 boinc boinc        95 Oct 25 14:52 pilot_heartbeat.json
[2025-10-25 14:52:51] -rw------- 1 boinc boinc      4752 Oct 25 14:52 pilotlog.txt
[2025-10-25 14:52:51] -rw------- 1 boinc boinc    766159 Oct 25 14:52 log.46965017._000306.job.log.1
[2025-10-25 14:52:51] -rw------- 1 boinc boinc       357 Oct 25 14:52 output.list
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc      8192 Oct 25 14:52 boinc_mmap_file
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc       620 Oct 25 14:52 runtime_log
[2025-10-25 14:52:51] -rw------- 1 boinc boinc   1044480 Oct 25 14:52 result.tar.gz
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc      8777 Oct 25 14:52 runtime_log.err
[2025-10-25 14:52:51] -rw------- 1 boinc boinc       658 Oct 25 14:52 dfZLDmLJdW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYuCODmukitum.diag
[2025-10-25 14:52:51] -rw-r--r-- 1 boinc boinc      6331 Oct 25 14:52 stderr.txt
[2025-10-25 14:52:51] HITS file was successfully produced:
[2025-10-25 14:52:51] -rw------- 1 boinc boinc 193863213 Oct 25 14:51 shared/HITS.pool.root.1
[2025-10-25 14:52:51]  *** Contents of shared directory: ***
[2025-10-25 14:52:51] total 459688
[2025-10-25 14:52:51] -rw-r--r-- 2 boinc boinc 275213876 Oct 25 13:24 ATLAS.root_0
[2025-10-25 14:52:51] -rw-r--r-- 2 boinc boinc    569706 Oct 25 13:24 input.tar.gz
[2025-10-25 14:52:51] -rw-r--r-- 2 boinc boinc     15120 Oct 25 13:24 start_atlas.sh
[2025-10-25 14:52:51] -rw------- 1 boinc boinc 193863213 Oct 25 14:51 HITS.pool.root.1
[2025-10-25 14:52:51] -rw------- 1 boinc boinc   1044480 Oct 25 14:52 result.tar.gz
14:53:12 (1834213): run_atlas exited; CPU time 19708.720389
14:53:12 (1834213): called boinc_finish(0)

</stderr_txt>
]]>

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