Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:58:30 (4079600): wrapper (7.7.26015): starting
20:58:30 (4079600): wrapper: running run_atlas (--nthreads 11)
[2025-10-24 20:58:30] Arguments: --nthreads 11
[2025-10-24 20:58:30] Threads: 11
[2025-10-24 20:58:30] Checking for CVMFS
[2025-10-24 20:58:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 20:58:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 20:58:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 20:58:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 20:58:32] 2.13.2.0 128802 135319 149036 152100 3 348 20395483 39288833 11969 16776704 0 104023802 99.666 89629632 32551 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-24 20:58:32] CVMFS is ok
[2025-10-24 20:58:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 20:58:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 20:58:32] Further information can be found at the LHC@home message board.
[2025-10-24 20:58:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 20:58:32] Checking for apptainer binary...
[2025-10-24 20:58:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 20:58:32] Running /usr/bin/apptainer --version
[2025-10-24 20:58:32] apptainer version 1.4.3-1.el9
[2025-10-24 20:58:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 20:58:32] c-210-7.aglt2.org
[2025-10-24 20:58:32] apptainer works
[2025-10-24 20:58:32] Set ATHENA_PROC_NUMBER=11
[2025-10-24 20:58:32] Set ATHENA_CORE_NUMBER=11
[2025-10-24 20:58:32] Starting ATLAS job with PandaID=6855925271
[2025-10-24 20:58:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:47:06 (213743): wrapper (7.7.26015): starting
23:47:06 (213743): wrapper: running run_atlas (--nthreads 10)
[2025-10-24 23:47:06] Arguments: --nthreads 10
[2025-10-24 23:47:06] Threads: 10
[2025-10-24 23:47:06] This job has been restarted, cleaning up previous attempt
[2025-10-24 23:47:06] Checking for CVMFS
[2025-10-24 23:47:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 23:47:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 23:47:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 23:47:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 23:47:06] 2.13.2.0 128802 135488 147032 152105 2 342 21086639 39288833 11919 16776704 0 104319387 99.666 89875266 32550 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-24 23:47:06] CVMFS is ok
[2025-10-24 23:47:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 23:47:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 23:47:06] Further information can be found at the LHC@home message board.
[2025-10-24 23:47:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 23:47:06] Checking for apptainer binary...
[2025-10-24 23:47:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 23:47:06] Running /usr/bin/apptainer --version
[2025-10-24 23:47:07] apptainer version 1.4.3-1.el9
[2025-10-24 23:47:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 23:47:07] c-210-7.aglt2.org
[2025-10-24 23:47:07] apptainer works
[2025-10-24 23:47:07] Set ATHENA_PROC_NUMBER=10
[2025-10-24 23:47:07] Set ATHENA_CORE_NUMBER=10
[2025-10-24 23:47:07] Starting ATLAS job with PandaID=6855925271
[2025-10-24 23:47:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 10:44:45]  *** The last 200 lines of the pilot log: ***
[2025-10-25 10:44:45] 2025-10-25 14:43:40,540 | INFO     | current chi2=0.04723216579896731 (change=30.999003998048064 %)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,541 | INFO     | sum of square deviations: 77532902971.87466
[2025-10-25 10:44:45] 2025-10-25 14:43:40,569 | INFO     | sum of deviations: 10880786218.719055
[2025-10-25 10:44:45] 2025-10-25 14:43:40,570 | INFO     | mean x: 1761384166.8936508
[2025-10-25 10:44:45] 2025-10-25 14:43:40,570 | INFO     | mean y: 2593702.2047619047
[2025-10-25 10:44:45] 2025-10-25 14:43:40,570 | INFO     | -- intersect: -244594831.10681346
[2025-10-25 10:44:45] 2025-10-25 14:43:40,570 | INFO     | intersect: -244594831.10681346
[2025-10-25 10:44:45] 2025-10-25 14:43:40,576 | INFO     | chi2: 0.034623007306861145
[2025-10-25 10:44:45] 2025-10-25 14:43:40,577 | INFO     | current chi2=0.034623007306861145 (change=26.696125995522003 %)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,578 | INFO     | sum of square deviations: 75701437415.17447
[2025-10-25 10:44:45] 2025-10-25 14:43:40,602 | INFO     | sum of deviations: 21734062892.9296
[2025-10-25 10:44:45] 2025-10-25 14:43:40,602 | INFO     | mean x: 1761384319.3936
[2025-10-25 10:44:45] 2025-10-25 14:43:40,603 | INFO     | mean y: 2592799.3824
[2025-10-25 10:44:45] 2025-10-25 14:43:40,603 | INFO     | -- intersect: -503104831.7783897
[2025-10-25 10:44:45] 2025-10-25 14:43:40,603 | INFO     | intersect: -503104831.7783897
[2025-10-25 10:44:45] 2025-10-25 14:43:40,608 | INFO     | chi2: 0.023811244020299823
[2025-10-25 10:44:45] 2025-10-25 14:43:40,608 | INFO     | current chi2=0.023811244020299823 (change=31.2271062728245 %)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,609 | INFO     | sum of square deviations: 73899156543.32106
[2025-10-25 10:44:45] 2025-10-25 14:43:40,637 | INFO     | sum of deviations: 31342190682.25161
[2025-10-25 10:44:45] 2025-10-25 14:43:40,638 | INFO     | mean x: 1761384471.8887098
[2025-10-25 10:44:45] 2025-10-25 14:43:40,638 | INFO     | mean y: 2591986.264516129
[2025-10-25 10:44:45] 2025-10-25 14:43:40,638 | INFO     | -- intersect: -744448312.5016872
[2025-10-25 10:44:45] 2025-10-25 14:43:40,638 | INFO     | intersect: -744448312.5016872
[2025-10-25 10:44:45] 2025-10-25 14:43:40,639 | INFO     | chi2: 0.015121718001159822
[2025-10-25 10:44:45] 2025-10-25 14:43:40,639 | INFO     | current chi2=0.015121718001159822 (change=36.49337267608493 %)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,640 | INFO     | sum of square deviations: 72125599596.12056
[2025-10-25 10:44:45] 2025-10-25 14:43:40,665 | INFO     | sum of deviations: 41620167752.011375
[2025-10-25 10:44:45] 2025-10-25 14:43:40,665 | INFO     | mean x: 1761384624.388618
[2025-10-25 10:44:45] 2025-10-25 14:43:40,665 | INFO     | mean y: 2591102.4016260165
[2025-10-25 10:44:45] 2025-10-25 14:43:40,665 | INFO     | -- intersect: -1013818105.3328623
[2025-10-25 10:44:45] 2025-10-25 14:43:40,665 | INFO     | intersect: -1013818105.3328623
[2025-10-25 10:44:45] 2025-10-25 14:43:40,666 | INFO     | chi2: 0.0045910184512720185
[2025-10-25 10:44:45] 2025-10-25 14:43:40,667 | INFO     | current chi2=0.0045910184512720185 (change=69.63957104001085 %)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,668 | INFO     | sum of square deviations: 70380760380.73601
[2025-10-25 10:44:45] 2025-10-25 14:43:40,687 | INFO     | sum of deviations: 39085784748.788536
[2025-10-25 10:44:45] 2025-10-25 14:43:40,687 | INFO     | mean x: 1761384776.8836067
[2025-10-25 10:44:45] 2025-10-25 14:43:40,688 | INFO     | mean y: 2591323.968852459
[2025-10-25 10:44:45] 2025-10-25 14:43:40,688 | INFO     | -- intersect: -975589444.1364783
[2025-10-25 10:44:45] 2025-10-25 14:43:40,688 | INFO     | intersect: -975589444.1364783
[2025-10-25 10:44:45] 2025-10-25 14:43:40,689 | INFO     | chi2: 0.004382135280917759
[2025-10-25 10:44:45] 2025-10-25 14:43:40,689 | INFO     | current chi2=0.004382135280917759 (change=4.54982206173414 %)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,689 | INFO     | left removable region: 70
[2025-10-25 10:44:45] 2025-10-25 14:43:40,696 | INFO     | sum of square deviations: 57121952084.755714
[2025-10-25 10:44:45] 2025-10-25 14:43:40,715 | INFO     | sum of deviations: 28038728549.080864
[2025-10-25 10:44:45] 2025-10-25 14:43:40,716 | INFO     | mean x: 1761385661.370826
[2025-10-25 10:44:45] 2025-10-25 14:43:40,716 | INFO     | mean y: 2591482.402460457
[2025-10-25 10:44:45] 2025-10-25 14:43:40,716 | INFO     | -- intersect: -861997570.0889704
[2025-10-25 10:44:45] 2025-10-25 14:43:40,716 | INFO     | intersect: -861997570.0889704
[2025-10-25 10:44:45] 2025-10-25 14:43:40,717 | INFO     | chi2: 0.003211794985530699
[2025-10-25 10:44:45] 2025-10-25 14:43:40,726 | INFO     | -- intersect: -861997570.0889704
[2025-10-25 10:44:45] 2025-10-25 14:43:40,726 | INFO     | current memory leak: 0.49 B/s (using 569 data points, chi2=0.00)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,727 | INFO     | could have reported an average CPU frequency of 2599 MHz (25 samples)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,727 | INFO     | ..............................
[2025-10-25 10:44:45] 2025-10-25 14:43:40,727 | INFO     | . Timing measurements:
[2025-10-25 10:44:45] 2025-10-25 14:43:40,728 | INFO     | . get job = 0 s
[2025-10-25 10:44:45] 2025-10-25 14:43:40,728 | INFO     | . initial setup = 1 s
[2025-10-25 10:44:45] 2025-10-25 14:43:40,728 | INFO     | . payload setup = 6 s
[2025-10-25 10:44:45] 2025-10-25 14:43:40,728 | INFO     | . stage-in = 0 s
[2025-10-25 10:44:45] 2025-10-25 14:43:40,728 | INFO     | . payload execution = 39336 s
[2025-10-25 10:44:45] 2025-10-25 14:43:40,728 | INFO     | . stage-out = 3 s
[2025-10-25 10:44:45] 2025-10-25 14:43:40,728 | INFO     | . log creation = 0 s
[2025-10-25 10:44:45] 2025-10-25 14:43:40,728 | INFO     | ..............................
[2025-10-25 10:44:45] 2025-10-25 14:43:40,919 | INFO     | time since job start (39383s) is within the limit (172800.0s)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,932 | INFO     | 39385s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-25 10:44:45] 2025-10-25 14:43:40,968 | INFO     | 
[2025-10-25 10:44:45] 2025-10-25 14:43:40,969 | INFO     | job summary report
[2025-10-25 10:44:45] 2025-10-25 14:43:40,969 | INFO     | --------------------------------------------------
[2025-10-25 10:44:45] 2025-10-25 14:43:40,969 | INFO     | PanDA job id: 6855925271
[2025-10-25 10:44:45] 2025-10-25 14:43:40,969 | INFO     | task id: 46771637
[2025-10-25 10:44:45] 2025-10-25 14:43:40,969 | INFO     | errors: (none)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,969 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 10:44:45] 2025-10-25 14:43:40,969 | INFO     | pilot state: finished 
[2025-10-25 10:44:45] 2025-10-25 14:43:40,969 | INFO     | transexitcode: 0
[2025-10-25 10:44:45] 2025-10-25 14:43:40,970 | INFO     | exeerrorcode: 0
[2025-10-25 10:44:45] 2025-10-25 14:43:40,970 | INFO     | exeerrordiag: 
[2025-10-25 10:44:45] 2025-10-25 14:43:40,970 | INFO     | exitcode: 0
[2025-10-25 10:44:45] 2025-10-25 14:43:40,970 | INFO     | exitmsg: OK
[2025-10-25 10:44:45] 2025-10-25 14:43:40,970 | INFO     | cpuconsumptiontime: 56230 s
[2025-10-25 10:44:45] 2025-10-25 14:43:40,970 | INFO     | nevents: 400
[2025-10-25 10:44:45] 2025-10-25 14:43:40,970 | INFO     | neventsw: 0
[2025-10-25 10:44:45] 2025-10-25 14:43:40,970 | INFO     | pid: 235038
[2025-10-25 10:44:45] 2025-10-25 14:43:40,971 | INFO     | pgrp: 235038
[2025-10-25 10:44:45] 2025-10-25 14:43:40,971 | INFO     | corecount: 10
[2025-10-25 10:44:45] 2025-10-25 14:43:40,971 | INFO     | event service: False
[2025-10-25 10:44:45] 2025-10-25 14:43:40,971 | INFO     | sizes: {0: 2348764, 1: 2348963, 5: 2349225, 11: 2349281, 39347: 2391379, 39351: 2400561, 39368: 2400763}
[2025-10-25 10:44:45] 2025-10-25 14:43:40,971 | INFO     | --------------------------------------------------
[2025-10-25 10:44:45] 2025-10-25 14:43:40,971 | INFO     | 
[2025-10-25 10:44:45] 2025-10-25 14:43:40,971 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-25 10:44:45] 2025-10-25 14:43:40,994 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,995 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,995 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,995 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,995 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,997 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,998 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 10:44:45] 2025-10-25 14:43:40,998 | INFO     | job 6855925271 has completed (purged errors)
[2025-10-25 10:44:45] 2025-10-25 14:43:40,998 | INFO     | overall cleanup function is called
[2025-10-25 10:44:45] 2025-10-25 14:43:42,015 | INFO     | --- collectZombieJob: --- 10, [235038]
[2025-10-25 10:44:45] 2025-10-25 14:43:42,016 | INFO     | zombie collector waiting for pid 235038
[2025-10-25 10:44:45] 2025-10-25 14:43:42,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 10:44:45] 2025-10-25 14:43:42,016 | INFO     | collected zombie processes
[2025-10-25 10:44:45] 2025-10-25 14:43:42,016 | INFO     | will attempt to kill all subprocesses of pid=235038
[2025-10-25 10:44:45] 2025-10-25 14:43:42,322 | INFO     | process IDs to be killed: [235038] (in reverse order)
[2025-10-25 10:44:45] 2025-10-25 14:43:42,398 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 10:44:45] 2025-10-25 14:43:42,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 10:44:45] 2025-10-25 14:43:42,408 | INFO     | did not find any defunct processes belonging to 235038
[2025-10-25 10:44:45] 2025-10-25 14:43:42,417 | INFO     | did not find any defunct processes belonging to 235038
[2025-10-25 10:44:45] 2025-10-25 14:43:42,418 | INFO     | ready for new job
[2025-10-25 10:44:45] 2025-10-25 14:43:42,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 10:44:45] 2025-10-25 14:43:42,423 | INFO     | ***************************************
[2025-10-25 10:44:45] 2025-10-25 14:43:42,434 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 10:44:45] 2025-10-25 14:43:42,435 | INFO     | ***************************************
[2025-10-25 10:44:45] 2025-10-25 14:43:42,435 | INFO     | 
[2025-10-25 10:44:45] 2025-10-25 14:43:42,437 | INFO     | architecture information:
[2025-10-25 10:44:45] 2025-10-25 14:43:42,442 | INFO     | executing command: cat /etc/os-release
[2025-10-25 10:44:45] 2025-10-25 14:43:42,509 | INFO     | cat /etc/os-release:
[2025-10-25 10:44:45] NAME="CentOS Linux"
[2025-10-25 10:44:45] VERSION="7 (Core)"
[2025-10-25 10:44:45] ID="centos"
[2025-10-25 10:44:45] ID_LIKE="rhel fedora"
[2025-10-25 10:44:45] VERSION_ID="7"
[2025-10-25 10:44:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 10:44:45] ANSI_COLOR="0;31"
[2025-10-25 10:44:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 10:44:45] HOME_URL="https://www.centos.org/"
[2025-10-25 10:44:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 10:44:45] 
[2025-10-25 10:44:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 10:44:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 10:44:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 10:44:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 10:44:45] 
[2025-10-25 10:44:45] 2025-10-25 14:43:42,509 | INFO     | ***************************************
[2025-10-25 10:44:45] 2025-10-25 14:43:43,013 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-25 10:44:45] 2025-10-25 14:43:43,192 | INFO     | sufficient remaining disk space (52466548736 B)
[2025-10-25 10:44:45] 2025-10-25 14:43:43,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 10:44:45] 2025-10-25 14:43:43,193 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 10:44:45] 2025-10-25 14:43:43,193 | INFO     | update_server=False
[2025-10-25 10:44:45] 2025-10-25 14:43:43,193 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 10:44:45] 2025-10-25 14:43:43,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 10:44:45] 2025-10-25 14:43:43,194 | INFO     | aborting loop
[2025-10-25 10:44:45] 2025-10-25 14:43:43,412 | INFO     | all data control threads have been joined
[2025-10-25 10:44:45] 2025-10-25 14:43:43,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 10:44:45] 2025-10-25 14:43:44,199 | INFO     | [job] retrieve thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:44,200 | INFO     | [job] job monitor thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:44,418 | INFO     | [data] control thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:44,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 10:44:45] 2025-10-25 14:43:44,566 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:44,575 | INFO     | all job control threads have been joined
[2025-10-25 10:44:45] 2025-10-25 14:43:44,585 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:44,693 | INFO     | all payload control threads have been joined
[2025-10-25 10:44:45] 2025-10-25 14:43:45,174 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:45,236 | INFO     | [payload] failed_post thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:45,283 | INFO     | [payload] validate_post thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:45,351 | INFO     | [data] copytool_in thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:45,423 | INFO     | [job] validate thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:45,581 | INFO     | [job] control thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:45,699 | INFO     | [payload] control thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:45,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 10:44:45] 2025-10-25 14:43:46,436 | INFO     | [data] copytool_out thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:46,997 | INFO     | [job] queue monitor thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:47,503 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:43:53,577 | INFO     | job.realtimelogging is not enabled
[2025-10-25 10:44:45] 2025-10-25 14:43:54,583 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 10:44:45] 2025-10-25 14:44:14,393 | INFO     | PID=221082 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-25 10:44:45] 2025-10-25 14:44:14,394 | INFO     | .. there are 12 such processes running
[2025-10-25 10:44:45] 2025-10-25 14:44:14,394 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 10:44:45] 2025-10-25 14:44:14,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 10:44:45] 2025-10-25 14:44:14,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 10:44:45] 2025-10-25 14:44:35,207 | INFO     | [monitor] cgroup control has ended
[2025-10-25 10:44:45] 2025-10-25 14:44:37,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727407433536)>', '<ExcThread(monitor, started 139726552033024)>']
[2025-10-25 10:44:45] 2025-10-25 14:44:37,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 10:44:45] 2025-10-25 14:44:37,534 | INFO     | [monitor] control thread has ended
[2025-10-25 10:44:45] 2025-10-25 14:44:42,266 | INFO     | all workflow threads have been joined
[2025-10-25 10:44:45] 2025-10-25 14:44:42,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 10:44:45] 2025-10-25 14:44:42,271 | INFO     | traces error code: 0
[2025-10-25 10:44:45] 2025-10-25 14:44:42,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 10:44:45] 2025-10-25 14:44:43,326 [wrapper] ==== pilot stdout END ====
[2025-10-25 10:44:45] 2025-10-25 14:44:43,365 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 10:44:45] 2025-10-25 14:44:43,410 [wrapper] pilotpid: 221082
[2025-10-25 10:44:45] 2025-10-25 14:44:43,460 [wrapper] Pilot exit status: 0
[2025-10-25 10:44:45] 2025-10-25 14:44:43,577 [wrapper] pandaids: 6855925271 6855925271
[2025-10-25 10:44:45] 2025-10-25 14:44:44,244 [wrapper] cleanup supervisor_pilot 1373312 221083
[2025-10-25 10:44:45] 2025-10-25 14:44:44,280 [wrapper] Test setup, not cleaning
[2025-10-25 10:44:45] 2025-10-25 14:44:44,322 [wrapper] apfmon messages muted
[2025-10-25 10:44:45] 2025-10-25 14:44:44,375 [wrapper] ==== wrapper stdout END ====
[2025-10-25 10:44:45] 2025-10-25 14:44:44,418 [wrapper] ==== wrapper stderr END ====
[2025-10-25 10:44:45]  *** Error codes and diagnostics ***
[2025-10-25 10:44:45]     "exeErrorCode": 0,
[2025-10-25 10:44:45]     "exeErrorDiag": "",
[2025-10-25 10:44:45]     "pilotErrorCode": 0,
[2025-10-25 10:44:45]     "pilotErrorDiag": "",
[2025-10-25 10:44:45]  *** Listing of results directory ***
[2025-10-25 10:44:45] total 667372
[2025-10-25 10:44:45] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas    557409 Oct 24 14:40 pilot3.tar.gz
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas      5112 Oct 24 15:33 queuedata.json
[2025-10-25 10:44:45] -rwx------. 1 boincer umatlas     36292 Oct 24 15:34 runpilot2-wrapper.sh
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas       100 Oct 24 20:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 10:44:45] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 24 20:58 run_atlas
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas       105 Oct 24 20:58 job.xml
[2025-10-25 10:44:45] -rw-r--r--. 3 boincer umatlas 229456694 Oct 24 20:58 EVNT.46771634._004924.pool.root.1
[2025-10-25 10:44:45] -rw-r--r--. 3 boincer umatlas 229456694 Oct 24 20:58 ATLAS.root_0
[2025-10-25 10:44:45] -rw-r--r--. 2 boincer umatlas    569690 Oct 24 20:58 input.tar.gz
[2025-10-25 10:44:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 24 20:58 start_atlas.sh
[2025-10-25 10:44:45] drwxrwx--x. 2 boincer umatlas      4096 Oct 24 20:58 shared
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas         0 Oct 24 20:58 boinc_lockfile
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas      2562 Oct 24 23:47 pandaJob.out
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas    978597 Oct 24 23:47 agis_schedconf.cvmfs.json
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas      6658 Oct 25 10:36 init_data.xml
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas 209605073 Oct 25 10:42 HITS.46771637._123558.pool.root.1
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas       531 Oct 25 10:42 boinc_task_state.xml
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas      1053 Oct 25 10:43 memory_monitor_summary.json
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas   1560772 Oct 25 10:43 agis_ddmendpoints.agis.ALL.json
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas    796886 Oct 25 10:43 log.46771637._123558.job.log.tgz.1
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas        96 Oct 25 10:43 pilot_heartbeat.json
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas      7846 Oct 25 10:43 heartbeat.json
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas      4895 Oct 25 10:44 pilotlog.txt
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas      8192 Oct 25 10:44 boinc_mmap_file
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas        28 Oct 25 10:44 wrapper_checkpoint.txt
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas   4686366 Oct 25 10:44 log.46771637._123558.job.log.1
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas       357 Oct 25 10:44 output.list
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas       620 Oct 25 10:44 runtime_log
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas   5498880 Oct 25 10:44 result.tar.gz
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas       787 Oct 25 10:44 rYbMDmujcW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcylMDmN0z9No.diag
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas      8786 Oct 25 10:44 runtime_log.err
[2025-10-25 10:44:45] -rw-r--r--. 1 boincer umatlas     23272 Oct 25 10:44 stderr.txt
[2025-10-25 10:44:45] HITS file was successfully produced:
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas 209605073 Oct 25 10:42 shared/HITS.pool.root.1
[2025-10-25 10:44:45]  *** Contents of shared directory: ***
[2025-10-25 10:44:45] total 434728
[2025-10-25 10:44:45] -rw-r--r--. 3 boincer umatlas 229456694 Oct 24 20:58 ATLAS.root_0
[2025-10-25 10:44:45] -rw-r--r--. 2 boincer umatlas    569690 Oct 24 20:58 input.tar.gz
[2025-10-25 10:44:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 24 20:58 start_atlas.sh
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas 209605073 Oct 25 10:42 HITS.pool.root.1
[2025-10-25 10:44:45] -rw-------. 1 boincer umatlas   5498880 Oct 25 10:44 result.tar.gz
10:44:46 (213743): run_atlas exited; CPU time 57032.000263
10:44:46 (213743): called boinc_finish(0)

</stderr_txt>
]]>

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