Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:40:49 (4132701): wrapper (7.7.26015): starting
13:40:49 (4132701): wrapper: running run_atlas (--nthreads 12)
[2025-10-24 13:40:49] Arguments: --nthreads 12
[2025-10-24 13:40:49] Threads: 12
[2025-10-24 13:40:49] Checking for CVMFS
[2025-10-24 13:40:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 13:40:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 13:40:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 13:40:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 13:40:51] 2.11.5.0 2461 48900 219116 152094 0 393 26579387 45568001 25726 130560 0 520117070 99.879 196872147 11896 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-24 13:40:51] CVMFS is ok
[2025-10-24 13:40:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 13:40:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 13:40:51] Further information can be found at the LHC@home message board.
[2025-10-24 13:40:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 13:40:51] Checking for apptainer binary...
[2025-10-24 13:40:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 13:40:51] Running /usr/bin/apptainer --version
[2025-10-24 13:40:51] apptainer version 1.4.1-1.el9
[2025-10-24 13:40:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 13:40:51] wns0083.triumf.lcg
[2025-10-24 13:40:51] apptainer works
[2025-10-24 13:40:51] Set ATHENA_PROC_NUMBER=12
[2025-10-24 13:40:51] Set ATHENA_CORE_NUMBER=12
[2025-10-24 13:40:51] Starting ATLAS job with PandaID=6855851060
[2025-10-24 13:40:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 13:46:43]  *** The last 200 lines of the pilot log: ***
[2025-10-24 13:46:43] 2025-10-24 20:46:09,203 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | WARNING  | wrong length of table data, x=[1761338603.0], y=[1602.0] (must be same and length>=4)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | INFO     | could have reported an average CPU frequency of 2711 MHz (4 samples)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | INFO     | ..............................
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | INFO     | . Timing measurements:
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . get job = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . initial setup = 5 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . payload setup = 25 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . stage-in = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . payload execution = 41 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . stage-out = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . log creation = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | ..............................
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6855851060/pilotlog.txt
[2025-10-24 13:46:43] 2025-10-24 20:46:09,239 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-24 13:46:43] - Log from pilotlog.txt -
[2025-10-24 13:46:43] 2025-10-24 20:46:09,203 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6855851060/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,203 | INFO     | extracted standard info from prmon json
[2025-10-24 13:46:43] 2025-10-24 20:46:09,203 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 13:46:43] 2025-10-24 20:46:09,203 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | WARNING  | wrong length of table data, x=[1761338603.0], y=[1602.0] (must be same and length>=4)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | INFO     | could have reported an average CPU frequency of 2711 MHz (4 samples)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | INFO     | ..............................
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | INFO     | . Timing measurements:
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . get job = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . initial setup = 5 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . payload setup = 25 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . stage-in = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . payload execution = 41 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . stage-out = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . log creation = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | ..............................
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6855851060/pilotlog.txt
[2025-10-24 13:46:43] 2025-10-24 20:46:09,239 | WARNING  | 
[2025-10-24 13:46:43] [begin log extracts]
[2025-10-24 13:46:43] - Log from pilotlog.txt -
[2025-10-24 13:46:43] 2025-10-24 20:46:09,203 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6855851060/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,203 | INFO     | extracted standard info from prmon json
[2025-10-24 13:46:43] 2025-10-24 20:46:09,203 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 13:46:43] 2025-10-24 20:46:09,203 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | WARNING  | wrong length of table data, x=[1761338603.0], y=[1602.0] (must be same and length>=4)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | INFO     | could have reported an average CPU frequency of 2711 MHz (4 samples)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | INFO     | ..............................
[2025-10-24 13:46:43] 2025-10-24 20:46:09,204 | INFO     | . Timing measurements:
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . get job = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . initial setup = 5 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . payload setup = 25 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . stage-in = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . payload execution = 41 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . stage-out = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | . log creation = 0 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | ..............................
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-24 13:46:43] 2025-10-24 20:46:09,205 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6855851060/pilotlog.txt
[2025-10-24 13:46:43] [end log extracts]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,242 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,242 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-24 13:46:43] 2025-10-24 20:46:09,668 | INFO     | 
[2025-10-24 13:46:43] 2025-10-24 20:46:09,668 | INFO     | job summary report
[2025-10-24 13:46:43] 2025-10-24 20:46:09,668 | INFO     | --------------------------------------------------
[2025-10-24 13:46:43] 2025-10-24 20:46:09,668 | INFO     | PanDA job id: 6855851060
[2025-10-24 13:46:43] 2025-10-24 20:46:09,668 | INFO     | task id: 46771637
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-24 13:43:37,310 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | pilot state: failed 
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | transexitcode: 65
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | exeerrorcode: 65
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | exitcode: 65
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | cpuconsumptiontime: 17 s
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | nevents: 0
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | neventsw: 0
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | pid: 4143691
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | pgrp: 4143691
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | corecount: 12
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | event service: False
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | sizes: {0: 2348705, 1: 2348960, 2: 2348960, 13: 2348988, 24: 2349044, 33: 2349334, 35: 2349518, 71: 2372750, 72: 2377046, 73: 2377046, 215: 2377212}
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | --------------------------------------------------
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | 
[2025-10-24 13:46:43] 2025-10-24 20:46:09,669 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-24 13:46:43] 2025-10-24 20:46:09,736 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,738 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,738 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 13:46:43] 2025-10-24 20:46:09,738 | INFO     | job 6855851060 has completed (purged errors)
[2025-10-24 13:46:43] 2025-10-24 20:46:09,738 | INFO     | overall cleanup function is called
[2025-10-24 13:46:43] 2025-10-24 20:46:10,754 | INFO     | --- collectZombieJob: --- 10, [4143691]
[2025-10-24 13:46:43] 2025-10-24 20:46:10,754 | INFO     | zombie collector waiting for pid 4143691
[2025-10-24 13:46:43] 2025-10-24 20:46:10,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 13:46:43] 2025-10-24 20:46:10,754 | INFO     | collected zombie processes
[2025-10-24 13:46:43] 2025-10-24 20:46:10,754 | INFO     | will attempt to kill all subprocesses of pid=4143691
[2025-10-24 13:46:43] 2025-10-24 20:46:11,202 | INFO     | process IDs to be killed: [4143691] (in reverse order)
[2025-10-24 13:46:43] 2025-10-24 20:46:11,499 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 13:46:43] 2025-10-24 20:46:11,500 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 13:46:43] 2025-10-24 20:46:11,522 | INFO     | did not find any defunct processes belonging to 4143691
[2025-10-24 13:46:43] 2025-10-24 20:46:11,553 | INFO     | did not find any defunct processes belonging to 4143691
[2025-10-24 13:46:43] 2025-10-24 20:46:11,563 | INFO     | ready for new job
[2025-10-24 13:46:43] 2025-10-24 20:46:11,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 13:46:43] 2025-10-24 20:46:11,565 | INFO     | ***************************************
[2025-10-24 13:46:43] 2025-10-24 20:46:11,565 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 13:46:43] 2025-10-24 20:46:11,565 | INFO     | ***************************************
[2025-10-24 13:46:43] 2025-10-24 20:46:11,565 | INFO     | 
[2025-10-24 13:46:43] 2025-10-24 20:46:11,567 | INFO     | architecture information:
[2025-10-24 13:46:43] 2025-10-24 20:46:11,567 | INFO     | executing command: cat /etc/os-release
[2025-10-24 13:46:43] 2025-10-24 20:46:11,622 | INFO     | cat /etc/os-release:
[2025-10-24 13:46:43] NAME="CentOS Linux"
[2025-10-24 13:46:43] VERSION="7 (Core)"
[2025-10-24 13:46:43] ID="centos"
[2025-10-24 13:46:43] ID_LIKE="rhel fedora"
[2025-10-24 13:46:43] VERSION_ID="7"
[2025-10-24 13:46:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 13:46:43] ANSI_COLOR="0;31"
[2025-10-24 13:46:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 13:46:43] HOME_URL="https://www.centos.org/"
[2025-10-24 13:46:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 13:46:43] 
[2025-10-24 13:46:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 13:46:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 13:46:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 13:46:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 13:46:43] 
[2025-10-24 13:46:43] 2025-10-24 20:46:11,623 | INFO     | ***************************************
[2025-10-24 13:46:43] 2025-10-24 20:46:12,126 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-24 13:46:43] 2025-10-24 20:46:12,143 | INFO     | sufficient remaining disk space (1776625385472 B)
[2025-10-24 13:46:43] 2025-10-24 20:46:12,143 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 13:46:43] 2025-10-24 20:46:12,144 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 13:46:43] 2025-10-24 20:46:12,144 | INFO     | update_server=False
[2025-10-24 13:46:43] 2025-10-24 20:46:12,144 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 13:46:43] 2025-10-24 20:46:12,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 13:46:43] 2025-10-24 20:46:12,144 | INFO     | aborting loop
[2025-10-24 13:46:43] 2025-10-24 20:46:12,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 13:46:43] 2025-10-24 20:46:12,539 | INFO     | all payload control threads have been joined
[2025-10-24 13:46:43] 2025-10-24 20:46:12,896 | INFO     | all data control threads have been joined
[2025-10-24 13:46:43] 2025-10-24 20:46:13,118 | INFO     | all job control threads have been joined
[2025-10-24 13:46:43] 2025-10-24 20:46:13,159 | INFO     | [job] retrieve thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:13,159 | INFO     | [job] job monitor thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:13,204 | INFO     | [data] copytool_in thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:13,264 | INFO     | [payload] failed_post thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:13,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 13:46:43] 2025-10-24 20:46:13,493 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:13,545 | INFO     | [payload] control thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:13,721 | INFO     | [payload] validate_post thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:13,902 | INFO     | [data] control thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:13,923 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:13,959 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:14,016 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:14,082 | INFO     | [job] validate thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:14,124 | INFO     | [job] control thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:14,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 13:46:43] 2025-10-24 20:46:14,493 | INFO     | [data] copytool_out thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:15,477 | INFO     | [job] queue monitor thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:17,330 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 13:46:43] 2025-10-24 20:46:33,836 | INFO     | [monitor] cgroup control has ended
[2025-10-24 13:46:43] 2025-10-24 20:46:34,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140209623041856)>', '<ExcThread(monitor, started 140208267851520)>']
[2025-10-24 13:46:43] 2025-10-24 20:46:39,337 | INFO     | all workflow threads have been joined
[2025-10-24 13:46:43] 2025-10-24 20:46:39,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 13:46:43] 2025-10-24 20:46:39,338 | INFO     | traces error code: 0
[2025-10-24 13:46:43] 2025-10-24 20:46:39,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 13:46:43] 2025-10-24 20:46:42,098 | INFO     | PID=4136557 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 13:46:43] 2025-10-24 20:46:42,098 | INFO     | .. there are 49 such processes running
[2025-10-24 13:46:43] 2025-10-24 20:46:42,098 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 13:46:43] 2025-10-24 20:46:42,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 13:46:43] 2025-10-24 20:46:42,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 13:46:43] 2025-10-24 20:46:42,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 13:46:43] 2025-10-24 20:46:42,099 | INFO     | [monitor] control thread has ended
[2025-10-24 13:46:43] 2025-10-24 20:46:42,204 [wrapper] ==== pilot stdout END ====
[2025-10-24 13:46:43] 2025-10-24 20:46:42,206 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 13:46:43] 2025-10-24 20:46:42,207 [wrapper] pilotpid: 4136557
[2025-10-24 13:46:43] 2025-10-24 20:46:42,209 [wrapper] Pilot exit status: 0
[2025-10-24 13:46:43] 2025-10-24 20:46:42,357 [wrapper] pandaids: 6855851060
[2025-10-24 13:46:43] 2025-10-24 20:46:42,817 [wrapper] cleanup supervisor_pilot 4136563 4136558
[2025-10-24 13:46:43] 2025-10-24 20:46:42,969 [wrapper] Test setup, not cleaning
[2025-10-24 13:46:43] 2025-10-24 20:46:42,985 [wrapper] apfmon messages muted
[2025-10-24 13:46:43] 2025-10-24 20:46:43,061 [wrapper] ==== wrapper stdout END ====
[2025-10-24 13:46:43] 2025-10-24 20:46:43,067 [wrapper] ==== wrapper stderr END ====
[2025-10-24 13:46:43]  *** Error codes and diagnostics ***
[2025-10-24 13:46:43]     "exeErrorCode": 65,
[2025-10-24 13:46:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-24 13:46:43]     "pilotErrorCode": 1305,
[2025-10-24 13:46:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-24 13:46:43]  *** Listing of results directory ***
[2025-10-24 13:46:43] total 225404
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc    557409 Oct 24 10:39 pilot3.tar.gz
[2025-10-24 13:46:43] -rwx------. 1 boinc boinc     36292 Oct 24 11:23 runpilot2-wrapper.sh
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc      5112 Oct 24 11:23 queuedata.json
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc       100 Oct 24 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 13:46:43] -rwxr-xr-x. 1 boinc boinc      7986 Oct 24 13:40 run_atlas
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc       105 Oct 24 13:40 job.xml
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc      6594 Oct 24 13:40 init_data.xml
[2025-10-24 13:46:43] -rw-r--r--. 2 boinc boinc 226682782 Oct 24 13:40 EVNT.46771634._004900.pool.root.1
[2025-10-24 13:46:43] -rw-r--r--. 2 boinc boinc     15120 Oct 24 13:40 start_atlas.sh
[2025-10-24 13:46:43] drwxrwx--x. 2 boinc boinc      4096 Oct 24 13:40 shared
[2025-10-24 13:46:43] -rw-r--r--. 2 boinc boinc    569685 Oct 24 13:40 input.tar.gz
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc         0 Oct 24 13:40 boinc_lockfile
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc      2562 Oct 24 13:40 pandaJob.out
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc    978597 Oct 24 13:41 agis_schedconf.cvmfs.json
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc   1560772 Oct 24 13:41 agis_ddmendpoints.agis.ALL.json
[2025-10-24 13:46:43] drwx------. 5 boinc boinc      4096 Oct 24 13:41 pilot3
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc       953 Oct 24 13:43 memory_monitor_summary.json
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc     22594 Oct 24 13:43 log.46771637._122834.job.log.tgz.1
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc      8404 Oct 24 13:46 heartbeat.json
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc      8192 Oct 24 13:46 boinc_mmap_file
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc        22 Oct 24 13:46 wrapper_checkpoint.txt
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc       524 Oct 24 13:46 boinc_task_state.xml
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc       823 Oct 24 13:46 pilotlog.txt
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc        95 Oct 24 13:46 pilot_heartbeat.json
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc     93617 Oct 24 13:46 log.46771637._122834.job.log.1
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc       188 Oct 24 13:46 output.list
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc       620 Oct 24 13:46 runtime_log
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc    133120 Oct 24 13:46 result.tar.gz
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc       643 Oct 24 13:46 WHGODmVcbW8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3olMDmeDuiPo.diag
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc      8528 Oct 24 13:46 runtime_log.err
[2025-10-24 13:46:43] -rw-r--r--. 1 boinc boinc     21829 Oct 24 13:46 stderr.txt
[2025-10-24 13:46:43] No HITS result produced
[2025-10-24 13:46:43]  *** Contents of shared directory: ***
[2025-10-24 13:46:43] total 222084
[2025-10-24 13:46:43] -rw-r--r--. 2 boinc boinc 226682782 Oct 24 13:40 ATLAS.root_0
[2025-10-24 13:46:43] -rw-r--r--. 2 boinc boinc     15120 Oct 24 13:40 start_atlas.sh
[2025-10-24 13:46:43] -rw-r--r--. 2 boinc boinc    569685 Oct 24 13:40 input.tar.gz
[2025-10-24 13:46:43] -rw-------. 1 boinc boinc    133120 Oct 24 13:46 result.tar.gz
13:46:45 (4132701): run_atlas exited; CPU time 30.082196
13:46:45 (4132701): called boinc_finish(0)

</stderr_txt>
]]>

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