Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:35:46 (1682573): wrapper (7.7.26015): starting
05:35:46 (1682573): wrapper: running run_atlas (--nthreads 4)
[2025-10-25 05:35:46] Arguments: --nthreads 4
[2025-10-25 05:35:46] Threads: 4
[2025-10-25 05:35:46] Checking for CVMFS
[2025-10-25 05:35:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 05:35:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 05:35:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 05:35:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 05:35:46] 2.9.2.0 3052 5115 98940 152105 0 57 31996571 36864001 0 130560 0 4361619 99.990 198433 880 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-25 05:35:46] CVMFS is ok
[2025-10-25 05:35:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 05:35:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 05:35:46] Further information can be found at the LHC@home message board.
[2025-10-25 05:35:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 05:35:46] Checking for apptainer binary...
[2025-10-25 05:35:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 05:35:46] Running /usr/bin/apptainer --version
[2025-10-25 05:35:46] apptainer version 1.4.1-1.1
[2025-10-25 05:35:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 05:35:46] thA334
[2025-10-25 05:35:46] apptainer works
[2025-10-25 05:35:46] Set ATHENA_PROC_NUMBER=4
[2025-10-25 05:35:46] Set ATHENA_CORE_NUMBER=4
[2025-10-25 05:35:46] Starting ATLAS job with PandaID=6855520839
[2025-10-25 05:35:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 06:54:06]  *** The last 200 lines of the pilot log: ***
[2025-10-25 06:54:06] 2025-10-25 04:53:10,781 | INFO     | [job] queue monitor thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:10,854 | INFO     | all job control threads have been joined
[2025-10-25 06:54:06] 2025-10-25 04:53:11,161 | INFO     | [job] job monitor thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:11,189 | INFO     | [payload] validate_post thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:11,191 | INFO     | all payload control threads have been joined
[2025-10-25 06:54:06] 2025-10-25 04:53:11,206 | INFO     | [data] control thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:11,242 | INFO     | [job] validate thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:11,350 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:11,532 | INFO     | [payload] failed_post thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:11,563 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:11,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 06:54:06] 2025-10-25 04:53:11,782 | INFO     | [data] copytool_out thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:11,809 | INFO     | [data] copytool_in thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:11,852 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:11,860 | INFO     | [job] control thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:12,196 | INFO     | [payload] control thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:15,678 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:20,675 | INFO     | job.realtimelogging is not enabled
[2025-10-25 06:54:06] 2025-10-25 04:53:21,680 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 06:54:06] 2025-10-25 04:53:40,389 | INFO     | PID=1686365 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-25 06:54:06] 2025-10-25 04:53:40,389 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 06:54:06] 2025-10-25 04:53:40,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 06:54:06] 2025-10-25 04:53:40,389 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 06:54:06] 2025-10-25 04:53:59,613 | INFO     | [monitor] cgroup control has ended
[2025-10-25 06:54:06] 2025-10-25 04:54:00,963 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744043784000)>', '<ExcThread(monitor, started 139743287285504)>']
[2025-10-25 06:54:06] 2025-10-25 04:54:01,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 06:54:06] 2025-10-25 04:54:01,502 | INFO     | [monitor] control thread has ended
[2025-10-25 06:54:06] 2025-10-25 04:54:05,989 | INFO     | all workflow threads have been joined
[2025-10-25 06:54:06] 2025-10-25 04:54:05,989 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 06:54:06] 2025-10-25 04:54:05,990 | INFO     | traces error code: 0
[2025-10-25 06:54:06] 2025-10-25 04:54:05,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 06:54:06] 2025-10-25 04:54:06,057 [wrapper] ==== pilot stdout END ====
[2025-10-25 06:54:06] 2025-10-25 04:54:06,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 06:54:06] 2025-10-25 04:54:06,064 [wrapper] pilotpid: 1686365
[2025-10-25 06:54:06] 2025-10-25 04:54:06,068 [wrapper] Pilot exit status: 0
[2025-10-25 06:54:06] 2025-10-25 04:54:06,080 [wrapper] pandaids: 6855520839
[2025-10-25 06:54:06] 2025-10-25 04:54:06,102 [wrapper] cleanup supervisor_pilot 1705929 1686366
[2025-10-25 06:54:06] 2025-10-25 04:54:06,105 [wrapper] Test setup, not cleaning
[2025-10-25 06:54:06] 2025-10-25 04:54:06,109 [wrapper] apfmon messages muted
[2025-10-25 06:54:06] 2025-10-25 04:54:06,112 [wrapper] ==== wrapper stdout END ====
[2025-10-25 06:54:06] 2025-10-25 04:54:06,115 [wrapper] ==== wrapper stderr END ====
[2025-10-25 06:54:06]  *** Error codes and diagnostics ***
[2025-10-25 06:54:06]     "exeErrorCode": 0,
[2025-10-25 06:54:06]     "exeErrorDiag": "",
[2025-10-25 06:54:06]     "pilotErrorCode": 0,
[2025-10-25 06:54:06]     "pilotErrorDiag": "",
[2025-10-25 06:54:06]  *** Listing of results directory ***
[2025-10-25 06:54:06] total 426052
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc    557409 Oct 24 14:11 pilot3.tar.gz
[2025-10-25 06:54:06] -rwx------ 1 boinc boinc     36292 Oct 24 14:13 runpilot2-wrapper.sh
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc      5112 Oct 24 14:13 queuedata.json
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc       100 Oct 25 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 06:54:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 05:35 run_atlas
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc       105 Oct 25 05:35 job.xml
[2025-10-25 06:54:06] -rw-r--r-- 2 boinc boinc 225477483 Oct 25 05:35 EVNT.46771634._004722.pool.root.1
[2025-10-25 06:54:06] -rw-r--r-- 2 boinc boinc    569683 Oct 25 05:35 input.tar.gz
[2025-10-25 06:54:06] -rw-r--r-- 2 boinc boinc     15120 Oct 25 05:35 start_atlas.sh
[2025-10-25 06:54:06] drwxrwx--x 2 boinc boinc      4096 Oct 25 05:35 shared
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc         0 Oct 25 05:35 boinc_setup_complete
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc      6368 Oct 25 05:35 init_data.xml
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc         0 Oct 25 05:35 boinc_lockfile
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc      2562 Oct 25 05:35 pandaJob.out
[2025-10-25 06:54:06] -rw------- 1 boinc boinc    978597 Oct 25 05:35 agis_schedconf.cvmfs.json
[2025-10-25 06:54:06] -rw------- 1 boinc boinc   1560772 Oct 25 05:35 agis_ddmendpoints.agis.ALL.json
[2025-10-25 06:54:06] drwx------ 5 boinc boinc      4096 Oct 25 05:35 pilot3
[2025-10-25 06:54:06] -rw------- 1 boinc boinc 204996828 Oct 25 06:52 HITS.46771637._118422.pool.root.1
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc       530 Oct 25 06:52 boinc_task_state.xml
[2025-10-25 06:54:06] -rw------- 1 boinc boinc      1019 Oct 25 06:52 memory_monitor_summary.json
[2025-10-25 06:54:06] -rw------- 1 boinc boinc    273905 Oct 25 06:52 log.46771637._118422.job.log.tgz.1
[2025-10-25 06:54:06] -rw------- 1 boinc boinc      7768 Oct 25 06:53 heartbeat.json
[2025-10-25 06:54:06] -rw------- 1 boinc boinc        95 Oct 25 06:53 pilot_heartbeat.json
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc      8192 Oct 25 06:53 boinc_mmap_file
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc        27 Oct 25 06:53 wrapper_checkpoint.txt
[2025-10-25 06:54:06] -rw------- 1 boinc boinc      4824 Oct 25 06:54 pilotlog.txt
[2025-10-25 06:54:06] -rw------- 1 boinc boinc    683813 Oct 25 06:54 log.46771637._118422.job.log.1
[2025-10-25 06:54:06] -rw------- 1 boinc boinc       357 Oct 25 06:54 output.list
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc       620 Oct 25 06:54 runtime_log
[2025-10-25 06:54:06] -rw------- 1 boinc boinc    972800 Oct 25 06:54 result.tar.gz
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc      8777 Oct 25 06:54 runtime_log.err
[2025-10-25 06:54:06] -rw------- 1 boinc boinc       658 Oct 25 06:54 NPULDm2qVW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmHIlMDmo3BoJo.diag
[2025-10-25 06:54:06] -rw-r--r-- 1 boinc boinc      6632 Oct 25 06:54 stderr.txt
[2025-10-25 06:54:06] HITS file was successfully produced:
[2025-10-25 06:54:06] -rw------- 1 boinc boinc 204996828 Oct 25 06:52 shared/HITS.pool.root.1
[2025-10-25 06:54:06]  *** Contents of shared directory: ***
[2025-10-25 06:54:06] total 421928
[2025-10-25 06:54:06] -rw-r--r-- 2 boinc boinc 225477483 Oct 25 05:35 ATLAS.root_0
[2025-10-25 06:54:06] -rw-r--r-- 2 boinc boinc    569683 Oct 25 05:35 input.tar.gz
[2025-10-25 06:54:06] -rw-r--r-- 2 boinc boinc     15120 Oct 25 05:35 start_atlas.sh
[2025-10-25 06:54:06] -rw------- 1 boinc boinc 204996828 Oct 25 06:52 HITS.pool.root.1
[2025-10-25 06:54:06] -rw------- 1 boinc boinc    972800 Oct 25 06:54 result.tar.gz
06:54:07 (1682573): run_atlas exited; CPU time 17567.400667
06:54:07 (1682573): called boinc_finish(0)

</stderr_txt>
]]>

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