Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-24 19:09:31 (36956): vboxwrapper version 26210
2025-10-24 19:09:31 (36956): BOINC client version: 8.2.4
2025-10-24 19:09:32 (36956): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2025-10-24 19:09:32 (36956): Successfully copied 'init_data.xml' to the shared directory.
2025-10-24 19:09:33 (36956): Create VM. (boinc_d698cfbe1382fd0d, slot#2)
2025-10-24 19:09:33 (36956): Setting Memory Size for VM. (4400MB)
2025-10-24 19:09:33 (36956): Setting CPU Count for VM. (4)
2025-10-24 19:09:34 (36956): Setting Chipset Options for VM.
2025-10-24 19:09:34 (36956): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-24 19:09:34 (36956): Setting Boot Options for VM.
2025-10-24 19:09:35 (36956): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-24 19:09:35 (36956): Enabling VM Network Access.
2025-10-24 19:09:35 (36956): Disabling USB Support for VM.
2025-10-24 19:09:36 (36956): Disabling COM Port Support for VM.
2025-10-24 19:09:36 (36956): Disabling LPT Port Support for VM.
2025-10-24 19:09:36 (36956): Disabling Audio Support for VM.
2025-10-24 19:09:37 (36956): Disabling Clipboard Support for VM.
2025-10-24 19:09:37 (36956): Disabling Drag and Drop Support for VM.
2025-10-24 19:09:37 (36956): Adding storage controller(s) to VM.
2025-10-24 19:09:37 (36956): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-24 19:09:40 (36956): Adding VirtualBox Guest Additions to VM.
2025-10-24 19:09:41 (36956): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-24 19:09:41 (36956): forwarding host port 62726 to guest port 80
2025-10-24 19:09:41 (36956): Enabling remote desktop for VM.
2025-10-24 19:09:42 (36956): Required extension pack not installed, remote desktop not enabled.
2025-10-24 19:09:42 (36956): Enabling shared directory for VM.
2025-10-24 19:09:42 (36956): Starting VM using VBoxManage interface. (boinc_d698cfbe1382fd0d, slot#2)
2025-10-24 19:09:49 (36956): Successfully started VM. (PID = '39560')
2025-10-24 19:09:49 (36956): Reporting VM Process ID to BOINC.
2025-10-24 19:09:49 (36956): Guest Log: BIOS: VirtualBox 7.2.4
2025-10-24 19:09:49 (36956): Guest Log: CPUID EDX: 0x178bfbff
2025-10-24 19:09:49 (36956): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-24 19:09:49 (36956): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-24 19:09:49 (36956): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-24 19:09:49 (36956): Detected: Web Application Enabled (http://localhost:62726)
2025-10-24 19:09:49 (36956): Preference change detected
2025-10-24 19:09:49 (36956): Setting CPU throttle for VM. (100%)
2025-10-24 19:09:50 (36956): Setting network throttle for VM. (500KB)
2025-10-24 19:09:50 (36956): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-24 19:09:51 (36956): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-24 19:09:51 (36956): Guest Log: BIOS: Booting from Hard Disk...
2025-10-24 19:09:54 (36956): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-24 19:09:54 (36956): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-24 19:09:54 (36956): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-24 19:10:03 (36956): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-24 19:10:03 (36956): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-24 19:10:25 (36956): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-24 19:10:25 (36956): Guest Log: 00:00:00.000230 main     Log opened 2025-10-24T19:10:23.102222000Z
2025-10-24 19:10:25 (36956): Guest Log: 00:00:00.000395 main     OS Product: Linux
2025-10-24 19:10:25 (36956): Guest Log: 00:00:00.000464 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-24 19:10:25 (36956): Guest Log: 00:00:00.000506 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-24 19:10:25 (36956): Guest Log: 00:00:00.000548 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-24 19:10:25 (36956): Guest Log: 00:00:00.000549 main     Process ID: 1273
2025-10-24 19:10:25 (36956): Guest Log: 00:00:00.000550 main     Package type: LINUX_64BITS_GENERIC
2025-10-24 19:10:25 (36956): Guest Log: 00:00:00.001708 main     5.2.32 r132073 started. Verbose level = 0
2025-10-24 19:10:26 (36956): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-24 19:10:26 (36956): Guest Log: [INFO] Mounting shared directory
2025-10-24 19:10:26 (36956): Guest Log: [INFO] Checking for init_data.xml
2025-10-24 19:10:34 (36956): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-24 19:10:34 (36956): Guest Log: [INFO] Detected branch: prod
2025-10-24 19:10:34 (36956): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-24 19:10:34 (36956): Guest Log: Copying input files
2025-10-24 19:10:35 (36956): Guest Log: 00:00:10.005780 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 808 942 000ns (GuestNow=1 761 325 835 298 380 000 ns GuestLast=1 761 333 023 107 322 000 ns fSetTimeLastLoop=true )
2025-10-24 19:10:36 (36956): Guest Log: Copied input files into RunAtlas.
2025-10-24 19:10:36 (36956): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-24 19:10:36 (36956): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-24 19:10:36 (36956): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-24 19:10:36 (36956): Guest Log: Further information can be found at the LHC@home message board.
2025-10-24 19:10:47 (36956): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-24 19:10:47 (36956): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-24 19:10:47 (36956): Guest Log: 2.6.3.0 1549 0 32152 152089 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-24 19:10:51 (36956): Guest Log: copied the webapp to /var/www
2025-10-24 19:10:51 (36956): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-24 19:10:51 (36956): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-24 19:10:51 (36956): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-24 19:10:51 (36956): Guest Log:  *** Starting ATLAS job. (PandaID=6857554067 taskID=46964913) ***
2025-10-24 19:20:42 (36956): Guest Log:  *** Job finished ***
2025-10-24 19:20:42 (36956): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:25,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:25,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:33,545 | INFO     | [monitor] cgroup control has ended
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:34,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440288036672)>', '<ExcThread(monitor, started 140439717930752)>']
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:35,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:35,075 | INFO     | [monitor] control thread has ended
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:39,972 | INFO     | all workflow threads have been joined
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:39,972 | INFO     | end of generic workflow (traces error code: 0)
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:39,972 | INFO     | traces error code: 0
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:39,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:40,127 [wrapper] ==== pilot stdout END ====
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:40,135 [wrapper] ==== wrapper stdout RESUME ====
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:40,145 [wrapper] pilotpid: 5951
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:40,153 [wrapper] Pilot exit status: 0
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:40,381 [wrapper] pandaids: 6857554067
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:40,430 [wrapper] cleanup supervisor_pilot  5957 5952
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:40,439 [wrapper] Test setup, not cleaning
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:40,448 [wrapper] apfmon messages muted
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:40,457 [wrapper] ==== wrapper stdout END ====
2025-10-24 19:20:42 (36956): Guest Log: 2025-10-24 17:20:40,465 [wrapper] ==== wrapper stderr END ====
2025-10-24 19:20:42 (36956): Guest Log:  *** Error codes and diagnostics ***
2025-10-24 19:20:42 (36956): Guest Log:     "exeErrorCode": 65,
2025-10-24 19:20:42 (36956): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-24 19:20:42 (36956): Guest Log:     "pilotErrorCode": 1305,
2025-10-24 19:20:42 (36956): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-24 19:20:42 (36956): Guest Log:  *** Listing of results directory ***
2025-10-24 19:20:42 (36956): Guest Log: total 4144
2025-10-24 19:20:42 (36956): Guest Log: -rw-r--r--. 1 atlas atlas  557409 Oct 24 09:36 pilot3.tar.gz
2025-10-24 19:20:42 (36956): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct 24 09:45 queuedata.json
2025-10-24 19:20:42 (36956): Guest Log: -rwx------. 1 atlas atlas   36292 Oct 24 09:46 runpilot2-wrapper.sh
2025-10-24 19:20:42 (36956): Guest Log: -rwxr-xr-x. 1 atlas atlas   10954 Oct 24 17:10 init_data.xml
2025-10-24 19:20:42 (36956): Guest Log: -rwxr-xr-x. 1 atlas atlas  569671 Oct 24 17:10 input.tar.gz
2025-10-24 19:20:42 (36956): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Oct 24 17:10 start_atlas.sh
2025-10-24 19:20:42 (36956): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 24 17:10 EVNT.46964904._000153.pool.root.1 -> /data/./ATLAS.root_0
2025-10-24 19:20:42 (36956): Guest Log: -rw-r--r--. 1 atlas atlas    2557 Oct 24 17:10 pandaJob.out
2025-10-24 19:20:42 (36956): Guest Log: -rw-------. 1 atlas atlas  978605 Oct 24 17:12 agis_schedconf.cvmfs.json
2025-10-24 19:20:42 (36956): Guest Log: -rw-------. 1 atlas atlas 1560772 Oct 24 17:12 agis_ddmendpoints.agis.ALL.json
2025-10-24 19:20:42 (36956): Guest Log: drwx------. 5 atlas atlas    4096 Oct 24 17:12 pilot3
2025-10-24 19:20:42 (36956): Guest Log: -rw-------. 1 atlas atlas   48978 Oct 24 17:17 log.46964913._003801.job.log.tgz.1
2025-10-24 19:20:42 (36956): Guest Log: -rw-------. 1 atlas atlas    8055 Oct 24 17:19 heartbeat.json
2025-10-24 19:20:42 (36956): Guest Log: -rw-------. 1 atlas atlas      95 Oct 24 17:20 pilot_heartbeat.json
2025-10-24 19:20:42 (36956): Guest Log: -rw-------. 1 atlas atlas    4805 Oct 24 17:20 pilotlog.txt
2025-10-24 19:20:42 (36956): Guest Log: -rw-------. 1 atlas atlas  160398 Oct 24 17:20 log.46964913._003801.job.log.1
2025-10-24 19:20:42 (36956): Guest Log: -rw-------. 1 atlas atlas     188 Oct 24 17:20 output.list
2025-10-24 19:20:42 (36956): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct 24 17:20 runtime_log
2025-10-24 19:20:42 (36956): Guest Log: -rw-------. 1 atlas atlas  225280 Oct 24 17:20 result.tar.gz
2025-10-24 19:20:42 (36956): Guest Log: -rw-------. 1 atlas atlas     670 Oct 24 17:20 x0EODmCYTW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFNBODmw1O1Uo.diag
2025-10-24 19:20:42 (36956): Guest Log: -rw-r--r--. 1 atlas atlas    8573 Oct 24 17:20 runtime_log.err
2025-10-24 19:20:42 (36956): Guest Log: Looking for outputfile HITS.46964913._003801.pool.root.1
2025-10-24 19:20:42 (36956): Guest Log: No HITS file was produced
2025-10-24 19:20:42 (36956): Guest Log: Successfully finished the ATLAS job!
2025-10-24 19:20:42 (36956): Guest Log: Copying the results back to the shared directory!
2025-10-24 19:20:42 (36956): Guest Log:  *** Contents of shared directory: ***
2025-10-24 19:20:42 (36956): Guest Log: total 230028
2025-10-24 19:20:42 (36956): Guest Log: -rwxrwxrwx. 1 root root 234720677 Oct 24 17:09 ATLAS.root_0
2025-10-24 19:20:42 (36956): Guest Log: -rwxrwxrwx. 1 root root     10954 Oct 24 17:09 init_data.xml
2025-10-24 19:20:42 (36956): Guest Log: -rwxrwxrwx. 1 root root    569671 Oct 24 14:49 input.tar.gz
2025-10-24 19:20:42 (36956): Guest Log: -rwxrwxrwx. 1 root root    225280 Oct 24 17:20 result.tar.gz
2025-10-24 19:20:42 (36956): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 24 14:49 start_atlas.sh
2025-10-24 19:20:42 (36956): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-24 19:20:42 (36956): VM Completion File Detected.
2025-10-24 19:20:42 (36956): Powering off VM.
2025-10-24 19:20:43 (36956): Successfully stopped VM.
2025-10-24 19:20:43 (36956): Deregistering VM. (boinc_d698cfbe1382fd0d, slot#2)
2025-10-24 19:20:43 (36956): Removing network bandwidth throttle group from VM.
2025-10-24 19:20:44 (36956): Removing VM from VirtualBox.
2025-10-24 19:20:49 (36956): called boinc_finish(0)

</stderr_txt>
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