Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:58:35 (1631976): wrapper (7.7.26015): starting
02:58:35 (1631976): wrapper: running run_atlas (--nthreads 4)
[2025-10-25 02:58:35] Arguments: --nthreads 4
[2025-10-25 02:58:35] Threads: 4
[2025-10-25 02:58:35] Checking for CVMFS
[2025-10-25 02:58:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 02:58:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 02:58:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 02:58:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 02:58:35] 2.9.2.0 3052 4958 99036 152100 0 57 31959109 36864000 0 130560 0 4230397 99.990 191676 872 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-25 02:58:35] CVMFS is ok
[2025-10-25 02:58:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-25 02:58:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-25 02:58:35] Further information can be found at the LHC@home message board.
[2025-10-25 02:58:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 02:58:35] Checking for apptainer binary...
[2025-10-25 02:58:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 02:58:35] Running /usr/bin/apptainer --version
[2025-10-25 02:58:35] apptainer version 1.4.1-1.1
[2025-10-25 02:58:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 02:58:35] thA334
[2025-10-25 02:58:35] apptainer works
[2025-10-25 02:58:35] Set ATHENA_PROC_NUMBER=4
[2025-10-25 02:58:35] Set ATHENA_CORE_NUMBER=4
[2025-10-25 02:58:35] Starting ATLAS job with PandaID=6857392982
[2025-10-25 02:58:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 04:17:54]  *** The last 200 lines of the pilot log: ***
[2025-10-25 04:17:54] 2025-10-25 02:16:55,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 04:17:54] 2025-10-25 02:16:55,291 | INFO     | all data control threads have been joined
[2025-10-25 04:17:54] 2025-10-25 02:16:55,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 04:17:54] 2025-10-25 02:16:55,718 | INFO     | [job] retrieve thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:55,718 | INFO     | [job] queue monitor thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:55,719 | INFO     | [job] job monitor thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:55,737 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:55,753 | INFO     | all payload control threads have been joined
[2025-10-25 04:17:54] 2025-10-25 02:16:55,774 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:55,827 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:56,061 | INFO     | all job control threads have been joined
[2025-10-25 04:17:54] 2025-10-25 02:16:56,106 | INFO     | [data] copytool_in thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:56,277 | INFO     | [payload] failed_post thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:56,297 | INFO     | [data] control thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:56,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:56,758 | INFO     | [payload] control thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:56,857 | INFO     | [payload] validate_post thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:57,067 | INFO     | [job] control thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:57,149 | INFO     | [job] validate thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:57,277 | INFO     | [data] copytool_out thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:16:59,311 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 04:17:54] 2025-10-25 02:17:25,255 | INFO     | PID=1635768 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-25 04:17:54] 2025-10-25 02:17:25,255 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 04:17:54] 2025-10-25 02:17:25,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 04:17:54] 2025-10-25 02:17:25,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 04:17:54] 2025-10-25 02:17:49,205 | INFO     | [monitor] cgroup control has ended
[2025-10-25 04:17:54] 2025-10-25 02:17:49,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139626419468096)>', '<ExcThread(monitor, started 139625402189568)>']
[2025-10-25 04:17:54] 2025-10-25 02:17:50,385 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 04:17:54] 2025-10-25 02:17:50,385 | INFO     | [monitor] control thread has ended
[2025-10-25 04:17:54] 2025-10-25 02:17:54,803 | INFO     | all workflow threads have been joined
[2025-10-25 04:17:54] 2025-10-25 02:17:54,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 04:17:54] 2025-10-25 02:17:54,803 | INFO     | traces error code: 0
[2025-10-25 04:17:54] 2025-10-25 02:17:54,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 04:17:54] 2025-10-25 02:17:54,870 [wrapper] ==== pilot stdout END ====
[2025-10-25 04:17:54] 2025-10-25 02:17:54,874 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 04:17:54] 2025-10-25 02:17:54,878 [wrapper] pilotpid: 1635768
[2025-10-25 04:17:54] 2025-10-25 02:17:54,881 [wrapper] Pilot exit status: 0
[2025-10-25 04:17:54] 2025-10-25 02:17:54,892 [wrapper] pandaids: 6857392982
[2025-10-25 04:17:54] 2025-10-25 02:17:54,913 [wrapper] cleanup supervisor_pilot 1654665 1635769
[2025-10-25 04:17:54] 2025-10-25 02:17:54,916 [wrapper] Test setup, not cleaning
[2025-10-25 04:17:54] 2025-10-25 02:17:54,920 [wrapper] apfmon messages muted
[2025-10-25 04:17:54] 2025-10-25 02:17:54,923 [wrapper] ==== wrapper stdout END ====
[2025-10-25 04:17:54] 2025-10-25 02:17:54,926 [wrapper] ==== wrapper stderr END ====
[2025-10-25 04:17:54]  *** Error codes and diagnostics ***
[2025-10-25 04:17:54]     "exeErrorCode": 0,
[2025-10-25 04:17:54]     "exeErrorDiag": "",
[2025-10-25 04:17:54]     "pilotErrorCode": 0,
[2025-10-25 04:17:54]     "pilotErrorDiag": "",
[2025-10-25 04:17:54]  *** Listing of results directory ***
[2025-10-25 04:17:54] total 403340
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc    557409 Oct 24 06:24 pilot3.tar.gz
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc      5112 Oct 24 07:08 queuedata.json
[2025-10-25 04:17:54] -rwx------ 1 boinc boinc     36292 Oct 24 07:08 runpilot2-wrapper.sh
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc       100 Oct 25 02:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 04:17:54] -rwxr-xr-x 1 boinc boinc      7986 Oct 25 02:58 run_atlas
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc       105 Oct 25 02:58 job.xml
[2025-10-25 04:17:54] -rw-r--r-- 2 boinc boinc 237878915 Oct 25 02:58 EVNT.46964904._000062.pool.root.1
[2025-10-25 04:17:54] -rw-r--r-- 2 boinc boinc    569671 Oct 25 02:58 input.tar.gz
[2025-10-25 04:17:54] -rw-r--r-- 2 boinc boinc     15120 Oct 25 02:58 start_atlas.sh
[2025-10-25 04:17:54] drwxrwx--x 2 boinc boinc      4096 Oct 25 02:58 shared
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc         0 Oct 25 02:58 boinc_setup_complete
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc      6368 Oct 25 02:58 init_data.xml
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc         0 Oct 25 02:58 boinc_lockfile
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc      2559 Oct 25 02:58 pandaJob.out
[2025-10-25 04:17:54] -rw------- 1 boinc boinc    978589 Oct 25 02:58 agis_schedconf.cvmfs.json
[2025-10-25 04:17:54] -rw------- 1 boinc boinc   1560772 Oct 25 02:58 agis_ddmendpoints.agis.ALL.json
[2025-10-25 04:17:54] drwx------ 5 boinc boinc      4096 Oct 25 02:58 pilot3
[2025-10-25 04:17:54] -rw------- 1 boinc boinc 169325341 Oct 25 04:16 HITS.46964913._001545.pool.root.1
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc       529 Oct 25 04:16 boinc_task_state.xml
[2025-10-25 04:17:54] -rw------- 1 boinc boinc      1032 Oct 25 04:16 memory_monitor_summary.json
[2025-10-25 04:17:54] -rw------- 1 boinc boinc    273486 Oct 25 04:16 log.46964913._001545.job.log.tgz.1
[2025-10-25 04:17:54] -rw------- 1 boinc boinc      7757 Oct 25 04:16 heartbeat.json
[2025-10-25 04:17:54] -rw------- 1 boinc boinc        95 Oct 25 04:17 pilot_heartbeat.json
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc      8192 Oct 25 04:17 boinc_mmap_file
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc        27 Oct 25 04:17 wrapper_checkpoint.txt
[2025-10-25 04:17:54] -rw------- 1 boinc boinc      4752 Oct 25 04:17 pilotlog.txt
[2025-10-25 04:17:54] -rw------- 1 boinc boinc    691989 Oct 25 04:17 log.46964913._001545.job.log.1
[2025-10-25 04:17:54] -rw------- 1 boinc boinc       357 Oct 25 04:17 output.list
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc       620 Oct 25 04:17 runtime_log
[2025-10-25 04:17:54] -rw------- 1 boinc boinc    983040 Oct 25 04:17 result.tar.gz
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc      8777 Oct 25 04:17 runtime_log.err
[2025-10-25 04:17:54] -rw------- 1 boinc boinc       658 Oct 25 04:17 XubKDmbDPW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIlkMDm3u8BQn.diag
[2025-10-25 04:17:54] -rw-r--r-- 1 boinc boinc      6862 Oct 25 04:17 stderr.txt
[2025-10-25 04:17:54] HITS file was successfully produced:
[2025-10-25 04:17:54] -rw------- 1 boinc boinc 169325341 Oct 25 04:16 shared/HITS.pool.root.1
[2025-10-25 04:17:54]  *** Contents of shared directory: ***
[2025-10-25 04:17:54] total 399208
[2025-10-25 04:17:54] -rw-r--r-- 2 boinc boinc 237878915 Oct 25 02:58 ATLAS.root_0
[2025-10-25 04:17:54] -rw-r--r-- 2 boinc boinc    569671 Oct 25 02:58 input.tar.gz
[2025-10-25 04:17:54] -rw-r--r-- 2 boinc boinc     15120 Oct 25 02:58 start_atlas.sh
[2025-10-25 04:17:54] -rw------- 1 boinc boinc 169325341 Oct 25 04:16 HITS.pool.root.1
[2025-10-25 04:17:54] -rw------- 1 boinc boinc    983040 Oct 25 04:17 result.tar.gz
04:17:56 (1631976): run_atlas exited; CPU time 17684.808057
04:17:56 (1631976): called boinc_finish(0)

</stderr_txt>
]]>

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