Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:25:16 (15495): wrapper (7.7.26015): starting
02:25:16 (15495): wrapper: running run_atlas (--nthreads 8)
[2025-10-25 02:25:16] Arguments: --nthreads 8
[2025-10-25 02:25:16] Threads: 8
[2025-10-25 02:25:16] Checking for CVMFS
[2025-10-25 02:25:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-25 02:25:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-25 02:25:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-25 02:25:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-25 02:25:19] 2.11.2.0 20954 238547 143672 152100 2 60 17583649 25165825 4632 130560 0 113380969 99.887 66415957 3217 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-25 02:25:19] CVMFS is ok
[2025-10-25 02:25:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-25 02:25:19] Checking for apptainer binary...
[2025-10-25 02:25:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-25 02:25:19] Running /usr/bin/apptainer --version
[2025-10-25 02:25:19] apptainer version 1.3.2-1.el7
[2025-10-25 02:25:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-25 02:25:29] cg-vwn319.simple-grid.lan
[2025-10-25 02:25:29] apptainer works
[2025-10-25 02:25:29] Set ATHENA_PROC_NUMBER=8
[2025-10-25 02:25:29] Set ATHENA_CORE_NUMBER=8
[2025-10-25 02:25:30] Starting ATLAS job with PandaID=6857546850
[2025-10-25 02:25:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 07:40:45]  *** The last 200 lines of the pilot log: ***
[2025-10-25 07:40:45] 2025-10-25 05:39:40,526 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-25 07:40:45] 2025-10-25 05:39:40,532 | INFO     | fitting pss+swap vs Time
[2025-10-25 07:40:45] 2025-10-25 05:39:40,533 | INFO     | sum of square deviations: 8123493708.0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,541 | INFO     | sum of deviations: 97522370546.0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,541 | INFO     | mean x: 1761361654.0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,542 | INFO     | mean y: 2486199.047138047
[2025-10-25 07:40:45] 2025-10-25 05:39:40,542 | INFO     | -- intersect: -21142623289.711693
[2025-10-25 07:40:45] 2025-10-25 05:39:40,542 | INFO     | intersect: -21142623289.711693
[2025-10-25 07:40:45] 2025-10-25 05:39:40,542 | INFO     | chi2: 7.027358144356019
[2025-10-25 07:40:45] 2025-10-25 05:39:40,543 | INFO     | sum of square deviations: 7720081493.0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,546 | INFO     | sum of deviations: 115491682256.50005
[2025-10-25 07:40:45] 2025-10-25 05:39:40,546 | INFO     | mean x: 1761361501.5
[2025-10-25 07:40:45] 2025-10-25 05:39:40,546 | INFO     | mean y: 2492888.6883561644
[2025-10-25 07:40:45] 2025-10-25 05:39:40,546 | INFO     | -- intersect: -26347307052.480457
[2025-10-25 07:40:45] 2025-10-25 05:39:40,546 | INFO     | intersect: -26347307052.480457
[2025-10-25 07:40:45] 2025-10-25 05:39:40,547 | INFO     | chi2: 6.305736969656502
[2025-10-25 07:40:45] 2025-10-25 05:39:40,547 | INFO     | current chi2=6.305736969656502 (change=10.268740540555523 %)
[2025-10-25 07:40:45] 2025-10-25 05:39:40,547 | INFO     | right removable region: 291
[2025-10-25 07:40:45] 2025-10-25 05:39:40,547 | INFO     | sum of square deviations: 7720081493.0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,550 | INFO     | sum of deviations: -5993570677.0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,550 | INFO     | mean x: 1761361806.5
[2025-10-25 07:40:45] 2025-10-25 05:39:40,550 | INFO     | mean y: 2525304.191780822
[2025-10-25 07:40:45] 2025-10-25 05:39:40,551 | INFO     | -- intersect: 1369978029.2178466
[2025-10-25 07:40:45] 2025-10-25 05:39:40,551 | INFO     | intersect: 1369978029.2178466
[2025-10-25 07:40:45] 2025-10-25 05:39:40,551 | INFO     | chi2: 2.378979832763311
[2025-10-25 07:40:45] 2025-10-25 05:39:40,551 | INFO     | current chi2=2.378979832763311 (change=66.14688217258467 %)
[2025-10-25 07:40:45] 2025-10-25 05:39:40,552 | INFO     | sum of square deviations: 7330250928.0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,555 | INFO     | sum of deviations: -57492060189.99999
[2025-10-25 07:40:45] 2025-10-25 05:39:40,555 | INFO     | mean x: 1761361959.0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,555 | INFO     | mean y: 2545354.205574913
[2025-10-25 07:40:45] 2025-10-25 05:39:40,555 | INFO     | -- intersect: 13817123976.118242
[2025-10-25 07:40:45] 2025-10-25 05:39:40,555 | INFO     | intersect: 13817123976.118242
[2025-10-25 07:40:45] 2025-10-25 05:39:40,556 | INFO     | chi2: 1.0000566596964064
[2025-10-25 07:40:45] 2025-10-25 05:39:40,556 | INFO     | current chi2=1.0000566596964064 (change=57.96279371839871 %)
[2025-10-25 07:40:45] 2025-10-25 05:39:40,556 | INFO     | sum of square deviations: 6953769450.5
[2025-10-25 07:40:45] 2025-10-25 05:39:40,565 | INFO     | sum of deviations: -55692641564.0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,565 | INFO     | mean x: 1761362111.5
[2025-10-25 07:40:45] 2025-10-25 05:39:40,565 | INFO     | mean y: 2544598.290780142
[2025-10-25 07:40:45] 2025-10-25 05:39:40,566 | INFO     | -- intersect: 14109268935.136078
[2025-10-25 07:40:45] 2025-10-25 05:39:40,566 | INFO     | intersect: 14109268935.136078
[2025-10-25 07:40:45] 2025-10-25 05:39:40,566 | INFO     | chi2: 0.9785951428428455
[2025-10-25 07:40:45] 2025-10-25 05:39:40,566 | INFO     | current chi2=0.9785951428428455 (change=2.1460300919426016 %)
[2025-10-25 07:40:45] 2025-10-25 05:39:40,566 | INFO     | left removable region: 30
[2025-10-25 07:40:45] 2025-10-25 05:39:40,567 | INFO     | sum of square deviations: 5513070810.0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,569 | INFO     | sum of deviations: -7397771156.999972
[2025-10-25 07:40:45] 2025-10-25 05:39:40,569 | INFO     | mean x: 1761362386.0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,569 | INFO     | mean y: 2539665.574712644
[2025-10-25 07:40:45] 2025-10-25 05:39:40,569 | INFO     | -- intersect: 2366042023.0159464
[2025-10-25 07:40:45] 2025-10-25 05:39:40,570 | INFO     | intersect: 2366042023.0159464
[2025-10-25 07:40:45] 2025-10-25 05:39:40,570 | INFO     | chi2: 0.09881045843101227
[2025-10-25 07:40:45] 2025-10-25 05:39:40,570 | INFO     | -- intersect: 2366042023.0159464
[2025-10-25 07:40:45] 2025-10-25 05:39:40,570 | INFO     | current memory leak: -1.34 B/s (using 261 data points, chi2=0.10)
[2025-10-25 07:40:45] 2025-10-25 05:39:40,571 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2025-10-25 07:40:45] 2025-10-25 05:39:40,571 | INFO     | ..............................
[2025-10-25 07:40:45] 2025-10-25 05:39:40,571 | INFO     | . Timing measurements:
[2025-10-25 07:40:45] 2025-10-25 05:39:40,571 | INFO     | . get job = 0 s
[2025-10-25 07:40:45] 2025-10-25 05:39:40,572 | INFO     | . initial setup = 10 s
[2025-10-25 07:40:45] 2025-10-25 05:39:40,572 | INFO     | . payload setup = 135 s
[2025-10-25 07:40:45] 2025-10-25 05:39:40,572 | INFO     | . stage-in = 0 s
[2025-10-25 07:40:45] 2025-10-25 05:39:40,572 | INFO     | . payload execution = 18212 s
[2025-10-25 07:40:45] 2025-10-25 05:39:40,572 | INFO     | . stage-out = 2 s
[2025-10-25 07:40:45] 2025-10-25 05:39:40,572 | INFO     | . log creation = 0 s
[2025-10-25 07:40:45] 2025-10-25 05:39:40,572 | INFO     | ..............................
[2025-10-25 07:40:45] 2025-10-25 05:39:40,706 | INFO     | 
[2025-10-25 07:40:45] 2025-10-25 05:39:40,706 | INFO     | job summary report
[2025-10-25 07:40:45] 2025-10-25 05:39:40,706 | INFO     | --------------------------------------------------
[2025-10-25 07:40:45] 2025-10-25 05:39:40,706 | INFO     | PanDA job id: 6857546850
[2025-10-25 07:40:45] 2025-10-25 05:39:40,706 | INFO     | task id: 46964970
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | errors: (none)
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | pilot state: finished 
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | transexitcode: 0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | exeerrorcode: 0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | exeerrordiag: 
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | exitcode: 0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | exitmsg: OK
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | cpuconsumptiontime: 68038 s
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | nevents: 400
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | neventsw: 0
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | pid: 25844
[2025-10-25 07:40:45] 2025-10-25 05:39:40,707 | INFO     | pgrp: 25844
[2025-10-25 07:40:45] 2025-10-25 05:39:40,708 | INFO     | corecount: 8
[2025-10-25 07:40:45] 2025-10-25 05:39:40,708 | INFO     | event service: False
[2025-10-25 07:40:45] 2025-10-25 05:39:40,717 | INFO     | sizes: {0: 2348140, 1: 2348997, 2: 2348997, 13: 2349025, 24: 2349081, 34: 2349109, 45: 2349265, 56: 2349293, 66: 2349321, 77: 2349349, 88: 2349405, 89: 2349975, 99
[2025-10-25 07:40:45] 2025-10-25 05:39:40,717 | INFO     | --------------------------------------------------
[2025-10-25 07:40:45] 2025-10-25 05:39:40,717 | INFO     | 
[2025-10-25 07:40:45] 2025-10-25 05:39:40,717 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-10-25 07:40:45] 2025-10-25 05:39:41,124 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,124 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,124 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,124 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,126 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 07:40:45] 2025-10-25 05:39:41,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,126 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 07:40:45] 2025-10-25 05:39:41,126 | INFO     | job 6857546850 has completed (purged errors)
[2025-10-25 07:40:45] 2025-10-25 05:39:41,127 | INFO     | overall cleanup function is called
[2025-10-25 07:40:45] 2025-10-25 05:39:42,143 | INFO     | --- collectZombieJob: --- 10, [25844]
[2025-10-25 07:40:45] 2025-10-25 05:39:42,143 | INFO     | zombie collector waiting for pid 25844
[2025-10-25 07:40:45] 2025-10-25 05:39:42,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 07:40:45] 2025-10-25 05:39:42,143 | INFO     | collected zombie processes
[2025-10-25 07:40:45] 2025-10-25 05:39:42,144 | INFO     | will attempt to kill all subprocesses of pid=25844
[2025-10-25 07:40:45] 2025-10-25 05:39:42,266 | INFO     | process IDs to be killed: [25844] (in reverse order)
[2025-10-25 07:40:45] 2025-10-25 05:39:43,096 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 07:40:45] 2025-10-25 05:39:43,097 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 07:40:45] 2025-10-25 05:39:43,100 | INFO     | did not find any defunct processes belonging to 25844
[2025-10-25 07:40:45] 2025-10-25 05:39:43,103 | INFO     | did not find any defunct processes belonging to 25844
[2025-10-25 07:40:45] 2025-10-25 05:39:43,104 | INFO     | ready for new job
[2025-10-25 07:40:45] 2025-10-25 05:39:43,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 07:40:45] 2025-10-25 05:39:43,106 | INFO     | ***************************************
[2025-10-25 07:40:45] 2025-10-25 05:39:43,106 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 07:40:45] 2025-10-25 05:39:43,106 | INFO     | ***************************************
[2025-10-25 07:40:45] 2025-10-25 05:39:43,106 | INFO     | 
[2025-10-25 07:40:45] 2025-10-25 05:39:43,107 | INFO     | pilot is running in a VM
[2025-10-25 07:40:45] 2025-10-25 05:39:43,107 | INFO     | architecture information:
[2025-10-25 07:40:45] 2025-10-25 05:39:43,119 | INFO     | executing command: cat /etc/os-release
[2025-10-25 07:40:45] 2025-10-25 05:39:43,347 | INFO     | cat /etc/os-release:
[2025-10-25 07:40:45] NAME="CentOS Linux"
[2025-10-25 07:40:45] VERSION="7 (Core)"
[2025-10-25 07:40:45] ID="centos"
[2025-10-25 07:40:45] ID_LIKE="rhel fedora"
[2025-10-25 07:40:45] VERSION_ID="7"
[2025-10-25 07:40:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 07:40:45] ANSI_COLOR="0;31"
[2025-10-25 07:40:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 07:40:45] HOME_URL="https://www.centos.org/"
[2025-10-25 07:40:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 07:40:45] 
[2025-10-25 07:40:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 07:40:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 07:40:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 07:40:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 07:40:45] 
[2025-10-25 07:40:45] 2025-10-25 05:39:43,348 | INFO     | ***************************************
[2025-10-25 07:40:45] 2025-10-25 05:39:43,851 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-10-25 07:40:45] 2025-10-25 05:39:44,112 | INFO     | sufficient remaining disk space (496490250240 B)
[2025-10-25 07:40:45] 2025-10-25 05:39:44,112 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 07:40:45] 2025-10-25 05:39:44,112 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 07:40:45] 2025-10-25 05:39:44,113 | INFO     | update_server=False
[2025-10-25 07:40:45] 2025-10-25 05:39:44,113 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 07:40:45] 2025-10-25 05:39:44,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 07:40:45] 2025-10-25 05:39:44,118 | INFO     | aborting loop
[2025-10-25 07:40:45] 2025-10-25 05:39:44,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 07:40:45] 2025-10-25 05:39:45,119 | INFO     | [job] retrieve thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:45,125 | INFO     | [job] job monitor thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:45,168 | INFO     | all data control threads have been joined
[2025-10-25 07:40:45] 2025-10-25 05:39:45,175 | INFO     | all job control threads have been joined
[2025-10-25 07:40:45] 2025-10-25 05:39:45,183 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:45,325 | INFO     | [payload] failed_post thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:45,383 | INFO     | all payload control threads have been joined
[2025-10-25 07:40:45] 2025-10-25 05:39:45,440 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:45,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 07:40:45] 2025-10-25 05:39:45,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 07:40:45] 2025-10-25 05:39:45,815 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:45,837 | INFO     | [payload] validate_post thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:45,875 | INFO     | [job] validate thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:46,130 | INFO     | [data] copytool_in thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:46,174 | INFO     | [data] control thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:46,181 | INFO     | [job] control thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:46,389 | INFO     | [payload] control thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:46,723 | INFO     | [job] queue monitor thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:47,487 | INFO     | [data] copytool_out thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:48,287 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:39:54,847 | INFO     | job.realtimelogging is not enabled
[2025-10-25 07:40:45] 2025-10-25 05:39:55,853 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 07:40:45] 2025-10-25 05:40:13,342 | INFO     | PID=19262 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-25 07:40:45] 2025-10-25 05:40:13,342 | INFO     | .. there are 9 such processes running
[2025-10-25 07:40:45] 2025-10-25 05:40:13,343 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 07:40:45] 2025-10-25 05:40:13,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 07:40:45] 2025-10-25 05:40:13,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 07:40:45] 2025-10-25 05:40:36,460 | INFO     | [monitor] cgroup control has ended
[2025-10-25 07:40:45] 2025-10-25 05:40:37,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140362154116928)>', '<ExcThread(monitor, started 140361720645376)>']
[2025-10-25 07:40:45] 2025-10-25 05:40:37,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 07:40:45] 2025-10-25 05:40:37,484 | INFO     | [monitor] control thread has ended
[2025-10-25 07:40:45] 2025-10-25 05:40:42,281 | INFO     | all workflow threads have been joined
[2025-10-25 07:40:45] 2025-10-25 05:40:42,281 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 07:40:45] 2025-10-25 05:40:42,281 | INFO     | traces error code: 0
[2025-10-25 07:40:45] 2025-10-25 05:40:42,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 07:40:45] 2025-10-25 05:40:42,531 [wrapper] ==== pilot stdout END ====
[2025-10-25 07:40:45] 2025-10-25 05:40:42,553 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 07:40:45] 2025-10-25 05:40:42,565 [wrapper] pilotpid: 19262
[2025-10-25 07:40:45] 2025-10-25 05:40:42,580 [wrapper] Pilot exit status: 0
[2025-10-25 07:40:45] 2025-10-25 05:40:43,088 [wrapper] pandaids: 6857546850
[2025-10-25 07:40:45] 2025-10-25 05:40:43,984 [wrapper] cleanup supervisor_pilot  5346 19263
[2025-10-25 07:40:45] 2025-10-25 05:40:44,071 [wrapper] Test setup, not cleaning
[2025-10-25 07:40:45] 2025-10-25 05:40:44,171 [wrapper] apfmon messages muted
[2025-10-25 07:40:45] 2025-10-25 05:40:44,276 [wrapper] ==== wrapper stdout END ====
[2025-10-25 07:40:45] 2025-10-25 05:40:44,392 [wrapper] ==== wrapper stderr END ====
[2025-10-25 07:40:45]  *** Error codes and diagnostics ***
[2025-10-25 07:40:45]     "exeErrorCode": 0,
[2025-10-25 07:40:45]     "exeErrorDiag": "",
[2025-10-25 07:40:45]     "pilotErrorCode": 0,
[2025-10-25 07:40:45]     "pilotErrorDiag": "",
[2025-10-25 07:40:45]  *** Listing of results directory ***
[2025-10-25 07:40:45] total 463844
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc    557409 Oct 24 10:08 pilot3.tar.gz
[2025-10-25 07:40:45] -rwx------. 1 boinc boinc     36292 Oct 24 10:23 runpilot2-wrapper.sh
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc      5112 Oct 24 10:23 queuedata.json
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc       100 Oct 25 02:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 07:40:45] -rwxr-xr-x. 1 boinc boinc      7986 Oct 25 02:25 run_atlas
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc       105 Oct 25 02:25 job.xml
[2025-10-25 07:40:45] -rw-r--r--. 2 boinc boinc 268547811 Oct 25 02:25 EVNT.46964963._000021.pool.root.1
[2025-10-25 07:40:45] -rw-r--r--. 2 boinc boinc     15120 Oct 25 02:25 start_atlas.sh
[2025-10-25 07:40:45] drwxrwx--x. 2 boinc boinc        68 Oct 25 02:25 shared
[2025-10-25 07:40:45] -rw-r--r--. 2 boinc boinc    569682 Oct 25 02:25 input.tar.gz
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc      6390 Oct 25 02:25 init_data.xml
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc         0 Oct 25 02:25 boinc_lockfile
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc      2586 Oct 25 02:25 pandaJob.out
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc    978589 Oct 25 02:28 agis_schedconf.cvmfs.json
[2025-10-25 07:40:45] drwx------. 5 boinc boinc      4096 Oct 25 02:29 pilot3
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc 196557545 Oct 25 07:37 HITS.46964970._000206.pool.root.1
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc       531 Oct 25 07:37 boinc_task_state.xml
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc      1020 Oct 25 07:38 memory_monitor_summary.json
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc   1560772 Oct 25 07:38 agis_ddmendpoints.agis.ALL.json
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc    503472 Oct 25 07:38 log.46964970._000206.job.log.tgz.1
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc        95 Oct 25 07:39 pilot_heartbeat.json
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc      7776 Oct 25 07:39 heartbeat.json
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc      8192 Oct 25 07:40 boinc_mmap_file
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc        28 Oct 25 07:40 wrapper_checkpoint.txt
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc      4957 Oct 25 07:40 pilotlog.txt
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc   2486910 Oct 25 07:40 log.46964970._000206.job.log.1
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc       357 Oct 25 07:40 output.list
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc       620 Oct 25 07:40 runtime_log
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc   3010560 Oct 25 07:40 result.tar.gz
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc      8717 Oct 25 07:40 runtime_log.err
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc       656 Oct 25 07:40 Ek4NDmFGSW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlykMDm6Vf3Bn.diag
[2025-10-25 07:40:45] -rw-r--r--. 1 boinc boinc     20607 Oct 25 07:40 stderr.txt
[2025-10-25 07:40:45] HITS file was successfully produced:
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc 196557545 Oct 25 07:37 shared/HITS.pool.root.1
[2025-10-25 07:40:45]  *** Contents of shared directory: ***
[2025-10-25 07:40:45] total 457724
[2025-10-25 07:40:45] -rw-r--r--. 2 boinc boinc 268547811 Oct 25 02:25 ATLAS.root_0
[2025-10-25 07:40:45] -rw-r--r--. 2 boinc boinc     15120 Oct 25 02:25 start_atlas.sh
[2025-10-25 07:40:45] -rw-r--r--. 2 boinc boinc    569682 Oct 25 02:25 input.tar.gz
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc 196557545 Oct 25 07:37 HITS.pool.root.1
[2025-10-25 07:40:45] -rw-------. 1 boinc boinc   3010560 Oct 25 07:40 result.tar.gz
07:40:47 (15495): run_atlas exited; CPU time 68302.244819
07:40:47 (15495): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN