Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:04:03 (2556543): wrapper (7.7.26015): starting
10:04:03 (2556543): wrapper: running run_atlas (--nthreads 8)
[2025-10-24 10:04:03] Arguments: --nthreads 8
[2025-10-24 10:04:03] Threads: 8
[2025-10-24 10:04:03] Checking for CVMFS
[2025-10-24 10:04:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 10:04:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 10:04:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 10:04:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 10:04:05] 2.13.2.0 1889558 146621 292072 152082 2 266 23243701 40960001 17189 16776704 0 262932393 99.730 213900482 30797 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-24 10:04:05] CVMFS is ok
[2025-10-24 10:04:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 10:04:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 10:04:05] Further information can be found at the LHC@home message board.
[2025-10-24 10:04:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 10:04:05] Checking for apptainer binary...
[2025-10-24 10:04:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 10:04:05] Running /usr/bin/apptainer --version
[2025-10-24 10:04:06] apptainer version 1.4.3-1.el9
[2025-10-24 10:04:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 10:04:26] c6-5-7-1.aglt2.org
[2025-10-24 10:04:26] apptainer works
[2025-10-24 10:04:26] Set ATHENA_PROC_NUMBER=8
[2025-10-24 10:04:26] Set ATHENA_CORE_NUMBER=8
[2025-10-24 10:04:26] Starting ATLAS job with PandaID=6855392209
[2025-10-24 10:04:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 16:55:53]  *** The last 200 lines of the pilot log: ***
[2025-10-24 16:55:53] 2025-10-24 19:50:46,916 | INFO     | sum of deviations: 18473111269.020878
[2025-10-24 16:55:53] 2025-10-24 19:50:46,916 | INFO     | mean x: 1761325124.4599407
[2025-10-24 16:55:53] 2025-10-24 19:50:46,916 | INFO     | mean y: 2140779.038575668
[2025-10-24 16:55:53] 2025-10-24 19:50:46,916 | INFO     | -- intersect: -2739450554.3482556
[2025-10-24 16:55:53] 2025-10-24 19:50:46,916 | INFO     | intersect: -2739450554.3482556
[2025-10-24 16:55:53] 2025-10-24 19:50:46,917 | INFO     | chi2: 4.073379444220462
[2025-10-24 16:55:53] 2025-10-24 19:50:46,917 | INFO     | sum of square deviations: 11347550400.49096
[2025-10-24 16:55:53] 2025-10-24 19:50:46,919 | INFO     | sum of deviations: 61671740258.26802
[2025-10-24 16:55:53] 2025-10-24 19:50:46,920 | INFO     | mean x: 1761324971.9608433
[2025-10-24 16:55:53] 2025-10-24 19:50:46,948 | INFO     | mean y: 2153357.328313253
[2025-10-24 16:55:53] 2025-10-24 19:50:46,948 | INFO     | -- intersect: -9570306984.109838
[2025-10-24 16:55:53] 2025-10-24 19:50:46,948 | INFO     | intersect: -9570306984.109838
[2025-10-24 16:55:53] 2025-10-24 19:50:46,949 | INFO     | chi2: 2.6902257710078343
[2025-10-24 16:55:53] 2025-10-24 19:50:46,949 | INFO     | current chi2=2.6902257710078343 (change=33.9559251023158 %)
[2025-10-24 16:55:53] 2025-10-24 19:50:46,950 | INFO     | sum of square deviations: 10842581297.345493
[2025-10-24 16:55:53] 2025-10-24 19:50:46,948 | INFO     | monitor loop #1274: job 0:6855392209 is in state 'finished'
[2025-10-24 16:55:53] 2025-10-24 19:50:46,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 16:55:53] 2025-10-24 19:50:46,977 | INFO     | sum of deviations: 66513288038.067276
[2025-10-24 16:55:53] 2025-10-24 19:50:46,977 | INFO     | mean x: 1761324819.4648318
[2025-10-24 16:55:53] 2025-10-24 19:50:46,977 | INFO     | mean y: 2154814.2232415904
[2025-10-24 16:55:53] 2025-10-24 19:50:46,977 | INFO     | -- intersect: -10802606693.476267
[2025-10-24 16:55:53] 2025-10-24 19:50:46,977 | INFO     | intersect: -10802606693.476267
[2025-10-24 16:55:53] 2025-10-24 19:50:46,977 | INFO     | chi2: 2.6689514000669217
[2025-10-24 16:55:53] 2025-10-24 19:50:46,977 | INFO     | current chi2=2.6689514000669217 (change=0.7908024363673645 %)
[2025-10-24 16:55:53] 2025-10-24 19:50:46,977 | INFO     | right removable region: 326
[2025-10-24 16:55:53] 2025-10-24 19:50:46,978 | INFO     | sum of square deviations: 11347516791.566233
[2025-10-24 16:55:53] 2025-10-24 19:50:47,039 | INFO     | sum of deviations: -44479432360.32532
[2025-10-24 16:55:53] 2025-10-24 19:50:47,039 | INFO     | mean x: 1761325276.9638555
[2025-10-24 16:55:53] 2025-10-24 19:50:47,039 | INFO     | mean y: 2159159.4728915663
[2025-10-24 16:55:53] 2025-10-24 19:50:47,039 | INFO     | -- intersect: 6906114444.163144
[2025-10-24 16:55:53] 2025-10-24 19:50:47,039 | INFO     | intersect: 6906114444.163144
[2025-10-24 16:55:53] 2025-10-24 19:50:47,039 | INFO     | chi2: 2.0546862587827
[2025-10-24 16:55:53] 2025-10-24 19:50:47,040 | INFO     | current chi2=2.0546862587827 (change=49.55819149875656 %)
[2025-10-24 16:55:53] 2025-10-24 19:50:47,040 | INFO     | sum of square deviations: 10842535183.272118
[2025-10-24 16:55:53] 2025-10-24 19:50:47,149 | INFO     | sum of deviations: -67004123689.76762
[2025-10-24 16:55:53] 2025-10-24 19:50:47,149 | INFO     | mean x: 1761325429.4617736
[2025-10-24 16:55:53] 2025-10-24 19:50:47,149 | INFO     | mean y: 2165951.978593272
[2025-10-24 16:55:53] 2025-10-24 19:50:47,149 | INFO     | -- intersect: 10886711396.264091
[2025-10-24 16:55:53] 2025-10-24 19:50:47,149 | INFO     | intersect: 10886711396.264091
[2025-10-24 16:55:53] 2025-10-24 19:50:47,150 | INFO     | chi2: 1.8024442960762574
[2025-10-24 16:55:53] 2025-10-24 19:50:47,150 | INFO     | current chi2=1.8024442960762574 (change=12.276422331061063 %)
[2025-10-24 16:55:53] 2025-10-24 19:50:47,150 | INFO     | left removable region: 20
[2025-10-24 16:55:53] 2025-10-24 19:50:47,150 | INFO     | sum of square deviations: 8884982315.529438
[2025-10-24 16:55:53] 2025-10-24 19:50:47,159 | INFO     | sum of deviations: -1394484113.8235352
[2025-10-24 16:55:53] 2025-10-24 19:50:47,159 | INFO     | mean x: 1761325398.9607842
[2025-10-24 16:55:53] 2025-10-24 19:50:47,159 | INFO     | mean y: 2176108.598039216
[2025-10-24 16:55:53] 2025-10-24 19:50:47,159 | INFO     | -- intersect: 278613382.2920789
[2025-10-24 16:55:53] 2025-10-24 19:50:47,159 | INFO     | intersect: 278613382.2920789
[2025-10-24 16:55:53] 2025-10-24 19:50:47,159 | INFO     | chi2: 0.23129301678847294
[2025-10-24 16:55:53] 2025-10-24 19:50:47,160 | INFO     | -- intersect: 278613382.2920789
[2025-10-24 16:55:53] 2025-10-24 19:50:47,160 | INFO     | current memory leak: -0.16 B/s (using 306 data points, chi2=0.23)
[2025-10-24 16:55:53] 2025-10-24 19:50:47,160 | INFO     | could have reported an average CPU frequency of 2760 MHz (15 samples)
[2025-10-24 16:55:53] 2025-10-24 19:50:47,161 | INFO     | ..............................
[2025-10-24 16:55:53] 2025-10-24 19:50:47,161 | INFO     | . Timing measurements:
[2025-10-24 16:55:53] 2025-10-24 19:50:47,161 | INFO     | . get job = 0 s
[2025-10-24 16:55:53] 2025-10-24 19:50:47,161 | INFO     | . initial setup = 4 s
[2025-10-24 16:55:53] 2025-10-24 19:50:47,161 | INFO     | . payload setup = 52 s
[2025-10-24 16:55:53] 2025-10-24 19:50:47,161 | INFO     | . stage-in = 0 s
[2025-10-24 16:55:53] 2025-10-24 19:50:47,161 | INFO     | . payload execution = 20557 s
[2025-10-24 16:55:53] 2025-10-24 19:50:47,161 | INFO     | . stage-out = 4 s
[2025-10-24 16:55:53] 2025-10-24 19:50:47,161 | INFO     | . log creation = 0 s
[2025-10-24 16:55:53] 2025-10-24 19:50:47,161 | INFO     | ..............................
[2025-10-24 16:55:53] 2025-10-24 19:50:48,374 | INFO     | time since job start (20727s) is within the limit (172800.0s)
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | 
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | job summary report
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | --------------------------------------------------
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | PanDA job id: 6855392209
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | task id: 46771637
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | errors: (none)
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | pilot state: finished 
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | transexitcode: 0
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | exeerrorcode: 0
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | exeerrordiag: 
[2025-10-24 16:55:53] 2025-10-24 19:50:48,456 | INFO     | exitcode: 0
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | exitmsg: OK
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | cpuconsumptiontime: 47508 s
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | nevents: 400
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | neventsw: 0
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | pid: 2573489
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | pgrp: 2573489
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | corecount: 8
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | event service: False
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | sizes: {0: 2348708, 1: 2348792, 2: 2348991, 13: 2348991, 24: 2349047, 30: 2349337, 34: 2349493, 20613: 2382858, 20614: 2382857, 20620: 2391911, 20621: 2391967, 206
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | --------------------------------------------------
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | 
[2025-10-24 16:55:53] 2025-10-24 19:50:48,457 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-24 16:55:53] 2025-10-24 19:50:48,616 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,617 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,617 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,617 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,617 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,617 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,617 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,618 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,618 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,619 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 16:55:53] 2025-10-24 19:50:48,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,619 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 16:55:53] 2025-10-24 19:50:48,619 | INFO     | job 6855392209 has completed (purged errors)
[2025-10-24 16:55:53] 2025-10-24 19:50:48,619 | INFO     | overall cleanup function is called
[2025-10-24 16:55:53] 2025-10-24 19:50:49,632 | INFO     | --- collectZombieJob: --- 10, [2573489]
[2025-10-24 16:55:53] 2025-10-24 19:50:49,632 | INFO     | zombie collector waiting for pid 2573489
[2025-10-24 16:55:53] 2025-10-24 19:50:49,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 16:55:53] 2025-10-24 19:50:49,632 | INFO     | collected zombie processes
[2025-10-24 16:55:53] 2025-10-24 19:50:49,632 | INFO     | will attempt to kill all subprocesses of pid=2573489
[2025-10-24 16:55:53] 2025-10-24 19:50:51,334 | INFO     | PID=2562075 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 16:55:53] 2025-10-24 19:50:51,334 | INFO     | .. there are 18 such processes running
[2025-10-24 16:55:53] 2025-10-24 19:50:51,439 | INFO     | process IDs to be killed: [2573489] (in reverse order)
[2025-10-24 16:55:53] 2025-10-24 19:50:51,592 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 16:55:53] 2025-10-24 19:50:51,592 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 16:55:53] 2025-10-24 19:50:51,639 | INFO     | did not find any defunct processes belonging to 2573489
[2025-10-24 16:55:53] 2025-10-24 19:50:51,674 | INFO     | did not find any defunct processes belonging to 2573489
[2025-10-24 16:55:53] 2025-10-24 19:50:51,675 | INFO     | ready for new job
[2025-10-24 16:55:53] 2025-10-24 19:50:51,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 16:55:53] 2025-10-24 19:50:51,689 | INFO     | ***************************************
[2025-10-24 16:55:53] 2025-10-24 19:50:51,689 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 16:55:53] 2025-10-24 19:50:51,689 | INFO     | ***************************************
[2025-10-24 16:55:53] 2025-10-24 19:50:51,689 | INFO     | 
[2025-10-24 16:55:53] 2025-10-24 19:50:51,705 | INFO     | architecture information:
[2025-10-24 16:55:53] 2025-10-24 19:50:51,717 | INFO     | executing command: cat /etc/os-release
[2025-10-24 16:55:53] 2025-10-24 19:50:51,883 | INFO     | cat /etc/os-release:
[2025-10-24 16:55:53] NAME="CentOS Linux"
[2025-10-24 16:55:53] VERSION="7 (Core)"
[2025-10-24 16:55:53] ID="centos"
[2025-10-24 16:55:53] ID_LIKE="rhel fedora"
[2025-10-24 16:55:53] VERSION_ID="7"
[2025-10-24 16:55:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 16:55:53] ANSI_COLOR="0;31"
[2025-10-24 16:55:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 16:55:53] HOME_URL="https://www.centos.org/"
[2025-10-24 16:55:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 16:55:53] 
[2025-10-24 16:55:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 16:55:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 16:55:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 16:55:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 16:55:53] 
[2025-10-24 16:55:53] 2025-10-24 19:50:51,891 | INFO     | ***************************************
[2025-10-24 16:55:53] 2025-10-24 19:50:52,431 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-24 16:55:53] 2025-10-24 19:50:52,549 | INFO     | sufficient remaining disk space (73814507520 B)
[2025-10-24 16:55:53] 2025-10-24 19:50:52,550 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 16:55:53] 2025-10-24 19:50:52,550 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 16:55:53] 2025-10-24 19:50:52,550 | INFO     | update_server=False
[2025-10-24 16:55:53] 2025-10-24 19:50:52,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 16:55:53] 2025-10-24 19:50:52,551 | INFO     | all payload control threads have been joined
[2025-10-24 16:55:53] 2025-10-24 19:50:52,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 16:55:53] 2025-10-24 19:50:52,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 16:55:53] 2025-10-24 19:50:52,745 | INFO     | all data control threads have been joined
[2025-10-24 16:55:53] 2025-10-24 19:50:53,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 16:55:53] 2025-10-24 19:50:53,035 | INFO     | aborting loop
[2025-10-24 16:55:53] 2025-10-24 19:50:53,219 | INFO     | all job control threads have been joined
[2025-10-24 16:55:53] 2025-10-24 19:50:53,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 16:55:53] 2025-10-24 19:50:53,556 | INFO     | [job] retrieve thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:53,559 | INFO     | [payload] control thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:53,756 | INFO     | [data] control thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:53,889 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:54,041 | INFO     | [job] job monitor thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:54,081 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:54,230 | INFO     | [job] control thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:54,322 | INFO     | [job] validate thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:54,375 | INFO     | [payload] validate_post thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:54,525 | INFO     | [job] queue monitor thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:54,729 | INFO     | [data] copytool_out thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:54,844 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:55,030 | INFO     | [data] copytool_in thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:55,058 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:55,058 | INFO     | [payload] failed_post thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:56,634 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 16:55:53] 2025-10-24 19:50:58,079 | INFO     | [monitor] cgroup control has ended
[2025-10-24 16:55:53] 2025-10-24 19:50:59,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245359781696)>', '<ExcThread(monitor, started 140245009938176)>']
[2025-10-24 16:55:53] 2025-10-24 19:51:04,378 | INFO     | all workflow threads have been joined
[2025-10-24 16:55:53] 2025-10-24 19:51:04,378 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 16:55:53] 2025-10-24 19:51:04,378 | INFO     | traces error code: 0
[2025-10-24 16:55:53] 2025-10-24 19:51:04,379 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 16:55:53] 2025-10-24 19:51:27,021 | INFO     | PID=2562075 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 16:55:53] 2025-10-24 19:51:27,022 | INFO     | .. there are 18 such processes running
[2025-10-24 16:55:53] 2025-10-24 19:51:27,031 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 16:55:53] 2025-10-24 19:51:27,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 16:55:53] 2025-10-24 19:51:27,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 16:55:53] 2025-10-24 19:51:27,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 16:55:53] 2025-10-24 19:51:27,032 | INFO     | [monitor] control thread has ended
[2025-10-24 16:55:53] 2025-10-24 19:51:27,287 [wrapper] ==== pilot stdout END ====
[2025-10-24 16:55:53] 2025-10-24 19:51:27,290 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 16:55:53] 2025-10-24 19:51:27,322 [wrapper] pilotpid: 2562075
[2025-10-24 16:55:53] 2025-10-24 19:51:27,355 [wrapper] Pilot exit status: 0
[2025-10-24 16:55:53] 2025-10-24 19:51:27,472 [wrapper] pandaids: 6855392209
[2025-10-24 16:55:53] 2025-10-24 19:51:27,538 [wrapper] cleanup supervisor_pilot 3474042 2562076
[2025-10-24 16:55:53] 2025-10-24 19:51:27,540 [wrapper] Test setup, not cleaning
[2025-10-24 16:55:53] 2025-10-24 19:51:27,543 [wrapper] apfmon messages muted
[2025-10-24 16:55:53] 2025-10-24 19:51:27,546 [wrapper] ==== wrapper stdout END ====
[2025-10-24 16:55:53] 2025-10-24 19:51:27,549 [wrapper] ==== wrapper stderr END ====
[2025-10-24 16:55:53]  *** Error codes and diagnostics ***
[2025-10-24 16:55:53]     "exeErrorCode": 0,
[2025-10-24 16:55:53]     "exeErrorDiag": "",
[2025-10-24 16:55:53]     "pilotErrorCode": 0,
[2025-10-24 16:55:53]     "pilotErrorDiag": "",
[2025-10-24 16:55:53]  *** Listing of results directory ***
[2025-10-24 16:55:53] total 438252
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas    557409 Oct 23 21:29 pilot3.tar.gz
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas      5112 Oct 23 22:21 queuedata.json
[2025-10-24 16:55:53] -rwx------. 1 boincer umatlas     36292 Oct 23 22:24 runpilot2-wrapper.sh
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas       100 Oct 24 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 16:55:53] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 24 10:04 run_atlas
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas       105 Oct 24 10:04 job.xml
[2025-10-24 16:55:53] -rw-r--r--. 2 boincer umatlas 226885713 Oct 24 10:04 EVNT.46771634._004629.pool.root.1
[2025-10-24 16:55:53] -rw-r--r--. 2 boincer umatlas    569688 Oct 24 10:04 input.tar.gz
[2025-10-24 16:55:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 24 10:04 start_atlas.sh
[2025-10-24 16:55:53] drwxrwx--x. 2 boincer umatlas      4096 Oct 24 10:04 shared
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas         0 Oct 24 10:04 boinc_lockfile
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas      2562 Oct 24 10:04 pandaJob.out
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas    978596 Oct 24 10:05 agis_schedconf.cvmfs.json
[2025-10-24 16:55:53] drwx------. 5 boincer umatlas      4096 Oct 24 10:05 pilot3
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas 211736812 Oct 24 15:47 HITS.46771637._116067.pool.root.1
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas       530 Oct 24 15:48 boinc_task_state.xml
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas      1042 Oct 24 15:49 memory_monitor_summary.json
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas   1560772 Oct 24 15:50 agis_ddmendpoints.agis.ALL.json
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas    530684 Oct 24 15:50 log.46771637._116067.job.log.tgz.1
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas      7831 Oct 24 15:50 heartbeat.json
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas        95 Oct 24 15:51 pilot_heartbeat.json
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas       823 Oct 24 15:51 pilotlog.txt
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas   2592020 Oct 24 15:51 log.46771637._116067.job.log.1
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas       357 Oct 24 15:51 output.list
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas       620 Oct 24 15:51 runtime_log
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas   3143680 Oct 24 15:51 result.tar.gz
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas      8704 Oct 24 15:51 runtime_log.err
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas       656 Oct 24 15:51 NQJMDmdeMW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpXAODmwPlWwm.diag
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas      6842 Oct 24 16:54 init_data.xml
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas        28 Oct 24 16:55 wrapper_checkpoint.txt
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas      8192 Oct 24 16:55 boinc_mmap_file
[2025-10-24 16:55:53] -rw-r--r--. 1 boincer umatlas     21241 Oct 24 16:55 stderr.txt
[2025-10-24 16:55:53] HITS file was successfully produced:
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas 211736812 Oct 24 15:47 shared/HITS.pool.root.1
[2025-10-24 16:55:53]  *** Contents of shared directory: ***
[2025-10-24 16:55:53] total 432000
[2025-10-24 16:55:53] -rw-r--r--. 2 boincer umatlas 226885713 Oct 24 10:04 ATLAS.root_0
[2025-10-24 16:55:53] -rw-r--r--. 2 boincer umatlas    569688 Oct 24 10:04 input.tar.gz
[2025-10-24 16:55:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 24 10:04 start_atlas.sh
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas 211736812 Oct 24 15:47 HITS.pool.root.1
[2025-10-24 16:55:53] -rw-------. 1 boincer umatlas   3143680 Oct 24 15:51 result.tar.gz
16:55:55 (2556543): run_atlas exited; CPU time 48094.579619
16:55:55 (2556543): called boinc_finish(0)

</stderr_txt>
]]>

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