Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:47:02 (1155498): wrapper (7.7.26015): starting
06:47:02 (1155498): wrapper: running run_atlas (--nthreads 8)
[2025-10-24 06:47:03] Arguments: --nthreads 8
[2025-10-24 06:47:03] Threads: 8
[2025-10-24 06:47:03] Checking for CVMFS
[2025-10-24 06:47:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 06:47:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 06:47:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 06:47:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 06:47:04] 2.13.1.0 5004 22858 147528 152073 3 458 29502704 40960000 26367 16776704 0 96196125 99.786 54870562 35036 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-24 06:47:04] CVMFS is ok
[2025-10-24 06:47:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 06:47:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 06:47:04] Further information can be found at the LHC@home message board.
[2025-10-24 06:47:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 06:47:04] Checking for apptainer binary...
[2025-10-24 06:47:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 06:47:04] Running /usr/bin/apptainer --version
[2025-10-24 06:47:04] apptainer version 1.4.3-1.el9
[2025-10-24 06:47:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 06:47:04] c-212-12.aglt2.org
[2025-10-24 06:47:04] apptainer works
[2025-10-24 06:47:04] Set ATHENA_PROC_NUMBER=8
[2025-10-24 06:47:04] Set ATHENA_CORE_NUMBER=8
[2025-10-24 06:47:04] Starting ATLAS job with PandaID=6855392239
[2025-10-24 06:47:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 15:05:49]  *** The last 200 lines of the pilot log: ***
[2025-10-24 15:05:49] 2025-10-24 19:04:40,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 15:05:49] 2025-10-24 19:04:40,452 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 15:05:49] 2025-10-24 19:04:40,474 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2928.110635416666
[2025-10-24 15:05:49] 2025-10-24 19:04:40,555 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6855392239/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 15:05:49] 2025-10-24 19:04:40,560 | INFO     | extracted standard info from prmon json
[2025-10-24 15:05:49] 2025-10-24 19:04:40,560 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 15:05:49] 2025-10-24 19:04:40,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 15:05:49] 2025-10-24 19:04:40,561 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 15:05:49] 2025-10-24 19:04:40,561 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 15:05:49] 2025-10-24 19:04:40,616 | INFO     | fitting pss+swap vs Time
[2025-10-24 15:05:49] 2025-10-24 19:04:40,618 | INFO     | sum of square deviations: 35816203429.02253
[2025-10-24 15:05:49] 2025-10-24 19:04:40,624 | INFO     | sum of deviations: 158654900076.16006
[2025-10-24 15:05:49] 2025-10-24 19:04:40,624 | INFO     | mean x: 1761317786.3039014
[2025-10-24 15:05:49] 2025-10-24 19:04:40,624 | INFO     | mean y: 2472700.336755647
[2025-10-24 15:05:49] 2025-10-24 19:04:40,624 | INFO     | -- intersect: -7799629997.180654
[2025-10-24 15:05:49] 2025-10-24 19:04:40,624 | INFO     | intersect: -7799629997.180654
[2025-10-24 15:05:49] 2025-10-24 19:04:40,625 | INFO     | chi2: 2.9427312340141683
[2025-10-24 15:05:49] 2025-10-24 19:04:40,625 | INFO     | sum of square deviations: 34724375377.66783
[2025-10-24 15:05:49] 2025-10-24 19:04:40,652 | INFO     | sum of deviations: 187446220029.28577
[2025-10-24 15:05:49] 2025-10-24 19:04:40,652 | INFO     | mean x: 1761317633.8049793
[2025-10-24 15:05:49] 2025-10-24 19:04:40,652 | INFO     | mean y: 2476686.1307053943
[2025-10-24 15:05:49] 2025-10-24 19:04:40,652 | INFO     | -- intersect: -9505320909.560501
[2025-10-24 15:05:49] 2025-10-24 19:04:40,653 | INFO     | intersect: -9505320909.560501
[2025-10-24 15:05:49] 2025-10-24 19:04:40,660 | INFO     | chi2: 2.246724794164339
[2025-10-24 15:05:49] 2025-10-24 19:04:40,661 | INFO     | current chi2=2.246724794164339 (change=23.651716194972025 %)
[2025-10-24 15:05:49] 2025-10-24 19:04:40,661 | INFO     | right removable region: 481
[2025-10-24 15:05:49] 2025-10-24 19:04:40,661 | INFO     | sum of square deviations: 34724314561.056
[2025-10-24 15:05:49] 2025-10-24 19:04:40,690 | INFO     | sum of deviations: 55161422758.4523
[2025-10-24 15:05:49] 2025-10-24 19:04:40,714 | INFO     | mean x: 1761317938.807054
[2025-10-24 15:05:49] 2025-10-24 19:04:40,714 | INFO     | mean y: 2487109.2199170124
[2025-10-24 15:05:49] 2025-10-24 19:04:40,715 | INFO     | -- intersect: -2795460227.1846724
[2025-10-24 15:05:49] 2025-10-24 19:04:40,715 | INFO     | intersect: -2795460227.1846724
[2025-10-24 15:05:49] 2025-10-24 19:04:40,715 | INFO     | chi2: 0.8568322850793526
[2025-10-24 15:05:49] 2025-10-24 19:04:40,715 | INFO     | current chi2=0.8568322850793526 (change=70.88309407344173 %)
[2025-10-24 15:05:49] 2025-10-24 19:04:40,716 | INFO     | sum of square deviations: 33654844718.079628
[2025-10-24 15:05:49] 2025-10-24 19:04:40,744 | INFO     | sum of deviations: 33395626633.622646
[2025-10-24 15:05:49] 2025-10-24 19:04:40,745 | INFO     | mean x: 1761318091.3102725
[2025-10-24 15:05:49] 2025-10-24 19:04:40,745 | INFO     | mean y: 2490209.0566037735
[2025-10-24 15:05:49] 2025-10-24 19:04:40,768 | INFO     | -- intersect: -1745261767.0160725
[2025-10-24 15:05:49] 2025-10-24 19:04:40,768 | INFO     | intersect: -1745261767.0160725
[2025-10-24 15:05:49] 2025-10-24 19:04:40,769 | INFO     | chi2: 0.7916773391607201
[2025-10-24 15:05:49] 2025-10-24 19:04:40,769 | INFO     | current chi2=0.7916773391607201 (change=7.604165605477665 %)
[2025-10-24 15:05:49] 2025-10-24 19:04:40,769 | INFO     | left removable region: 20
[2025-10-24 15:05:49] 2025-10-24 19:04:40,770 | INFO     | sum of square deviations: 30380568212.125805
[2025-10-24 15:05:49] 2025-10-24 19:04:40,792 | INFO     | sum of deviations: 32518380101.728878
[2025-10-24 15:05:49] 2025-10-24 19:04:40,793 | INFO     | mean x: 1761318213.318872
[2025-10-24 15:05:49] 2025-10-24 19:04:40,805 | INFO     | mean y: 2498977.7093275487
[2025-10-24 15:05:49] 2025-10-24 19:04:40,805 | INFO     | -- intersect: -1882759215.6493073
[2025-10-24 15:05:49] 2025-10-24 19:04:40,805 | INFO     | intersect: -1882759215.6493073
[2025-10-24 15:05:49] 2025-10-24 19:04:40,806 | INFO     | chi2: 0.016087795630509792
[2025-10-24 15:05:49] 2025-10-24 19:04:40,806 | INFO     | -- intersect: -1882759215.6493073
[2025-10-24 15:05:49] 2025-10-24 19:04:40,806 | INFO     | current memory leak: 1.07 B/s (using 461 data points, chi2=0.02)
[2025-10-24 15:05:49] 2025-10-24 19:04:40,807 | INFO     | could have reported an average CPU frequency of 2962 MHz (20 samples)
[2025-10-24 15:05:49] 2025-10-24 19:04:40,807 | INFO     | ..............................
[2025-10-24 15:05:49] 2025-10-24 19:04:40,807 | INFO     | . Timing measurements:
[2025-10-24 15:05:49] 2025-10-24 19:04:40,808 | INFO     | . get job = 0 s
[2025-10-24 15:05:49] 2025-10-24 19:04:40,808 | INFO     | . initial setup = 4 s
[2025-10-24 15:05:49] 2025-10-24 19:04:40,808 | INFO     | . payload setup = 27 s
[2025-10-24 15:05:49] 2025-10-24 19:04:40,808 | INFO     | . stage-in = 0 s
[2025-10-24 15:05:49] 2025-10-24 19:04:40,808 | INFO     | . payload execution = 29682 s
[2025-10-24 15:05:49] 2025-10-24 19:04:40,808 | INFO     | . stage-out = 6 s
[2025-10-24 15:05:49] 2025-10-24 19:04:40,808 | INFO     | . log creation = 1 s
[2025-10-24 15:05:49] 2025-10-24 19:04:40,808 | INFO     | ..............................
[2025-10-24 15:05:49] 2025-10-24 19:04:40,965 | INFO     | time since job start (29809s) is within the limit (172800.0s)
[2025-10-24 15:05:49] 2025-10-24 19:04:40,966 | INFO     | 29815s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-24 15:05:49] 2025-10-24 19:04:41,150 | INFO     | 
[2025-10-24 15:05:49] 2025-10-24 19:04:41,150 | INFO     | job summary report
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | --------------------------------------------------
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | PanDA job id: 6855392239
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | task id: 46771637
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | errors: (none)
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | pilot state: finished 
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | transexitcode: 0
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | exeerrorcode: 0
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | exeerrordiag: 
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | exitcode: 0
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | exitmsg: OK
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | cpuconsumptiontime: 44124 s
[2025-10-24 15:05:49] 2025-10-24 19:04:41,151 | INFO     | nevents: 400
[2025-10-24 15:05:49] 2025-10-24 19:04:41,152 | INFO     | neventsw: 0
[2025-10-24 15:05:49] 2025-10-24 19:04:41,152 | INFO     | pid: 1167720
[2025-10-24 15:05:49] 2025-10-24 19:04:41,152 | INFO     | pgrp: 1167720
[2025-10-24 15:05:49] 2025-10-24 19:04:41,152 | INFO     | corecount: 8
[2025-10-24 15:05:49] 2025-10-24 19:04:41,152 | INFO     | event service: False
[2025-10-24 15:05:49] 2025-10-24 19:04:41,152 | INFO     | sizes: {0: 2348708, 1: 2348963, 12: 2348963, 23: 2348991, 24: 2349281, 34: 2349309, 29713: 2387580, 29714: 2387579, 29720: 2396633, 29724: 2396689, 29758: 2396883}
[2025-10-24 15:05:49] 2025-10-24 19:04:41,152 | INFO     | --------------------------------------------------
[2025-10-24 15:05:49] 2025-10-24 19:04:41,152 | INFO     | 
[2025-10-24 15:05:49] 2025-10-24 19:04:41,152 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-24 15:05:49] 2025-10-24 19:04:41,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,356 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,356 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,356 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,357 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,357 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,357 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 15:05:49] 2025-10-24 19:04:41,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 15:05:49] 2025-10-24 19:04:41,357 | INFO     | job 6855392239 has completed (purged errors)
[2025-10-24 15:05:49] 2025-10-24 19:04:41,358 | INFO     | overall cleanup function is called
[2025-10-24 15:05:49] 2025-10-24 19:04:42,377 | INFO     | --- collectZombieJob: --- 10, [1167720]
[2025-10-24 15:05:49] 2025-10-24 19:04:42,377 | INFO     | zombie collector waiting for pid 1167720
[2025-10-24 15:05:49] 2025-10-24 19:04:42,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 15:05:49] 2025-10-24 19:04:42,378 | INFO     | collected zombie processes
[2025-10-24 15:05:49] 2025-10-24 19:04:42,378 | INFO     | will attempt to kill all subprocesses of pid=1167720
[2025-10-24 15:05:49] 2025-10-24 19:04:44,169 | INFO     | process IDs to be killed: [1167720] (in reverse order)
[2025-10-24 15:05:49] 2025-10-24 19:04:45,373 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 15:05:49] 2025-10-24 19:04:45,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 15:05:49] 2025-10-24 19:04:45,461 | INFO     | did not find any defunct processes belonging to 1167720
[2025-10-24 15:05:49] 2025-10-24 19:04:45,530 | INFO     | did not find any defunct processes belonging to 1167720
[2025-10-24 15:05:49] 2025-10-24 19:04:45,531 | INFO     | ready for new job
[2025-10-24 15:05:49] 2025-10-24 19:04:45,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 15:05:49] 2025-10-24 19:04:45,558 | INFO     | ***************************************
[2025-10-24 15:05:49] 2025-10-24 19:04:45,559 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 15:05:49] 2025-10-24 19:04:45,559 | INFO     | ***************************************
[2025-10-24 15:05:49] 2025-10-24 19:04:45,559 | INFO     | 
[2025-10-24 15:05:49] 2025-10-24 19:04:45,594 | INFO     | architecture information:
[2025-10-24 15:05:49] 2025-10-24 19:04:45,605 | INFO     | executing command: cat /etc/os-release
[2025-10-24 15:05:49] 2025-10-24 19:04:45,705 | INFO     | cat /etc/os-release:
[2025-10-24 15:05:49] NAME="CentOS Linux"
[2025-10-24 15:05:49] VERSION="7 (Core)"
[2025-10-24 15:05:49] ID="centos"
[2025-10-24 15:05:49] ID_LIKE="rhel fedora"
[2025-10-24 15:05:49] VERSION_ID="7"
[2025-10-24 15:05:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 15:05:49] ANSI_COLOR="0;31"
[2025-10-24 15:05:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 15:05:49] HOME_URL="https://www.centos.org/"
[2025-10-24 15:05:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 15:05:49] 
[2025-10-24 15:05:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 15:05:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 15:05:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 15:05:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 15:05:49] 
[2025-10-24 15:05:49] 2025-10-24 19:04:45,706 | INFO     | ***************************************
[2025-10-24 15:05:49] 2025-10-24 19:04:46,209 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-24 15:05:49] 2025-10-24 19:04:46,346 | INFO     | sufficient remaining disk space (127226871808 B)
[2025-10-24 15:05:49] 2025-10-24 19:04:46,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 15:05:49] 2025-10-24 19:04:46,346 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 15:05:49] 2025-10-24 19:04:46,346 | INFO     | update_server=False
[2025-10-24 15:05:49] 2025-10-24 19:04:46,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 15:05:49] 2025-10-24 19:04:46,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 15:05:49] 2025-10-24 19:04:46,416 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 15:05:49] 2025-10-24 19:04:46,416 | INFO     | aborting loop
[2025-10-24 15:05:49] 2025-10-24 19:04:46,552 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 15:05:49] 2025-10-24 19:04:46,711 | INFO     | all data control threads have been joined
[2025-10-24 15:05:49] 2025-10-24 19:04:47,178 | INFO     | all payload control threads have been joined
[2025-10-24 15:05:49] 2025-10-24 19:04:47,352 | INFO     | [job] retrieve thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:47,353 | INFO     | [job] queue monitor thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:47,356 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:47,422 | INFO     | [job] job monitor thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:47,656 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:47,717 | INFO     | [data] control thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:47,721 | INFO     | [data] copytool_in thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:47,887 | INFO     | all job control threads have been joined
[2025-10-24 15:05:49] 2025-10-24 19:04:47,925 | INFO     | [job] validate thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:48,122 | INFO     | [payload] validate_post thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:48,184 | INFO     | [payload] control thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:48,278 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:48,559 | INFO     | [data] copytool_out thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:48,678 | INFO     | [payload] failed_post thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:48,757 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:48,897 | INFO     | [job] control thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:04:49,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 15:05:49] 2025-10-24 19:04:53,017 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 15:05:49] 2025-10-24 19:05:14,928 | INFO     | PID=1159257 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 15:05:49] 2025-10-24 19:05:14,928 | INFO     | .. there are 23 such processes running
[2025-10-24 15:05:49] 2025-10-24 19:05:14,928 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 15:05:49] 2025-10-24 19:05:14,928 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 15:05:49] 2025-10-24 19:05:14,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 15:05:49] 2025-10-24 19:05:41,568 | INFO     | [monitor] cgroup control has ended
[2025-10-24 15:05:49] 2025-10-24 19:05:42,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692971198272)>', '<ExcThread(monitor, started 140692626061056)>']
[2025-10-24 15:05:49] 2025-10-24 19:05:43,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 15:05:49] 2025-10-24 19:05:43,118 | INFO     | [monitor] control thread has ended
[2025-10-24 15:05:49] 2025-10-24 19:05:47,804 | INFO     | all workflow threads have been joined
[2025-10-24 15:05:49] 2025-10-24 19:05:47,804 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 15:05:49] 2025-10-24 19:05:47,805 | INFO     | traces error code: 0
[2025-10-24 15:05:49] 2025-10-24 19:05:47,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 15:05:49] 2025-10-24 19:05:48,647 [wrapper] ==== pilot stdout END ====
[2025-10-24 15:05:49] 2025-10-24 19:05:48,680 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 15:05:49] 2025-10-24 19:05:48,696 [wrapper] pilotpid: 1159257
[2025-10-24 15:05:49] 2025-10-24 19:05:48,716 [wrapper] Pilot exit status: 0
[2025-10-24 15:05:49] 2025-10-24 19:05:48,854 [wrapper] pandaids: 6855392239
[2025-10-24 15:05:49] 2025-10-24 19:05:49,051 [wrapper] cleanup supervisor_pilot 2389129 1159258
[2025-10-24 15:05:49] 2025-10-24 19:05:49,053 [wrapper] Test setup, not cleaning
[2025-10-24 15:05:49] 2025-10-24 19:05:49,056 [wrapper] apfmon messages muted
[2025-10-24 15:05:49] 2025-10-24 19:05:49,058 [wrapper] ==== wrapper stdout END ====
[2025-10-24 15:05:49] 2025-10-24 19:05:49,060 [wrapper] ==== wrapper stderr END ====
[2025-10-24 15:05:49]  *** Error codes and diagnostics ***
[2025-10-24 15:05:49]     "exeErrorCode": 0,
[2025-10-24 15:05:49]     "exeErrorDiag": "",
[2025-10-24 15:05:49]     "pilotErrorCode": 0,
[2025-10-24 15:05:49]     "pilotErrorDiag": "",
[2025-10-24 15:05:49]  *** Listing of results directory ***
[2025-10-24 15:05:49] total 437060
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas      5112 Oct 23 22:26 queuedata.json
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas    557409 Oct 23 22:28 pilot3.tar.gz
[2025-10-24 15:05:49] -rwx------. 1 boincer umatlas     36292 Oct 23 22:29 runpilot2-wrapper.sh
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas       100 Oct 24 06:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 15:05:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 24 06:47 run_atlas
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas       105 Oct 24 06:47 job.xml
[2025-10-24 15:05:49] -rw-r--r--. 2 boincer umatlas 227445233 Oct 24 06:47 EVNT.46771634._004630.pool.root.1
[2025-10-24 15:05:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 24 06:47 start_atlas.sh
[2025-10-24 15:05:49] drwxrwx--x. 2 boincer umatlas      4096 Oct 24 06:47 shared
[2025-10-24 15:05:49] -rw-r--r--. 2 boincer umatlas    569689 Oct 24 06:47 input.tar.gz
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas         0 Oct 24 06:47 boinc_lockfile
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas      2562 Oct 24 06:47 pandaJob.out
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas    978578 Oct 24 06:47 agis_schedconf.cvmfs.json
[2025-10-24 15:05:49] drwx------. 5 boincer umatlas      4096 Oct 24 06:47 pilot3
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas 206990080 Oct 24 15:03 HITS.46771637._116097.pool.root.1
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas       531 Oct 24 15:03 boinc_task_state.xml
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas      6947 Oct 24 15:03 init_data.xml
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas      1060 Oct 24 15:03 memory_monitor_summary.json
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas   1560772 Oct 24 15:03 agis_ddmendpoints.agis.ALL.json
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas    671642 Oct 24 15:04 log.46771637._116097.job.log.tgz.1
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas        95 Oct 24 15:04 pilot_heartbeat.json
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas      7805 Oct 24 15:04 heartbeat.json
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas      8192 Oct 24 15:05 boinc_mmap_file
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas        28 Oct 24 15:05 wrapper_checkpoint.txt
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas      4825 Oct 24 15:05 pilotlog.txt
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas   3933913 Oct 24 15:05 log.46771637._116097.job.log.1
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas       357 Oct 24 15:05 output.list
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas       620 Oct 24 15:05 runtime_log
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas   4628480 Oct 24 15:05 result.tar.gz
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas      8704 Oct 24 15:05 runtime_log.err
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas       662 Oct 24 15:05 pzzMDmZjMW8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1VkMDmhK88Fo.diag
[2025-10-24 15:05:49] -rw-r--r--. 1 boincer umatlas     21276 Oct 24 15:05 stderr.txt
[2025-10-24 15:05:49] HITS file was successfully produced:
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas 206990080 Oct 24 15:03 shared/HITS.pool.root.1
[2025-10-24 15:05:49]  *** Contents of shared directory: ***
[2025-10-24 15:05:49] total 429356
[2025-10-24 15:05:49] -rw-r--r--. 2 boincer umatlas 227445233 Oct 24 06:47 ATLAS.root_0
[2025-10-24 15:05:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 24 06:47 start_atlas.sh
[2025-10-24 15:05:49] -rw-r--r--. 2 boincer umatlas    569689 Oct 24 06:47 input.tar.gz
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas 206990080 Oct 24 15:03 HITS.pool.root.1
[2025-10-24 15:05:49] -rw-------. 1 boincer umatlas   4628480 Oct 24 15:05 result.tar.gz
15:06:12 (1155498): run_atlas exited; CPU time 45076.258581
15:06:12 (1155498): called boinc_finish(0)

</stderr_txt>
]]>

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