Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
14:21:14 (14981): wrapper (7.7.26015): starting
14:21:14 (14981): wrapper: running run_atlas (--nthreads 8)
[2025-10-24 14:21:14] Arguments: --nthreads 8
[2025-10-24 14:21:14] Threads: 8
[2025-10-24 14:21:14] Checking for CVMFS
[2025-10-24 14:21:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 14:21:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 14:21:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 14:21:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 14:21:14] 2.11.0.0 5164 17804 81632 152077 0 1 3682887 4096000 0 130560 0 3897604 99.542 3134697 927 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-24 14:21:14] CVMFS is ok
[2025-10-24 14:21:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 14:21:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 14:21:14] Further information can be found at the LHC@home message board.
[2025-10-24 14:21:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 14:21:14] Checking for apptainer binary...
[2025-10-24 14:21:14] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-24 14:21:14] apptainer is not installed, using version from CVMFS
[2025-10-24 14:21:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 14:21:15] WARNING: Environment variable TMPDIR already has value [/tmp/job_10717950/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node161
[2025-10-24 14:21:15] apptainer works
[2025-10-24 14:21:15] Set ATHENA_PROC_NUMBER=8
[2025-10-24 14:21:15] Set ATHENA_CORE_NUMBER=8
[2025-10-24 14:21:15] Starting ATLAS job with PandaID=6853227333
[2025-10-24 14:21:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10717950/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 15:14:32]  *** The last 200 lines of the pilot log: ***
[2025-10-24 15:14:32]  protocol_id=None
[2025-10-24 15:14:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-24 15:14:32]  replicas=None
[2025-10-24 15:14:32]  scope=mc23_13p6TeV
[2025-10-24 15:14:32]  status=None
[2025-10-24 15:14:32]  status_code=0
[2025-10-24 15:14:32]  storage_token=
[2025-10-24 15:14:32]  surl=/tmp/job_10717950/atlas/pilot/slots/0/PanDA_Pilot-6853227333/log.46771637._077052.job.log.tgz.1
[2025-10-24 15:14:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/56/log.46771637._077052.job.log.tgz.1
[2025-10-24 15:14:32]  workdir=None
[2025-10-24 15:14:32] ]
[2025-10-24 15:14:32] 2025-10-24 13:13:30,981 | INFO     | transferring file log.46771637._077052.job.log.tgz.1 from /tmp/job_10717950/atlas/pilot/slots/0/PanDA_Pilot-6853227333/log.46771637._077052.job.log.tgz.1 to /tmp/j
[2025-10-24 15:14:32] 2025-10-24 13:13:30,981 | INFO     | executing command: /usr/bin/env mv /tmp/job_10717950/atlas/pilot/slots/0/PanDA_Pilot-6853227333/log.46771637._077052.job.log.tgz.1 /tmp/job_10717950/atlas/pilot/sl
[2025-10-24 15:14:32] 2025-10-24 13:13:30,989 | INFO     | adding to output.list: log.46771637._077052.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/56/log.46771637._077052.job.log.tg
[2025-10-24 15:14:32] 2025-10-24 13:13:30,990 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-24 15:14:32] 2025-10-24 13:13:30,990 | INFO     | summary of transferred files:
[2025-10-24 15:14:32] 2025-10-24 13:13:30,990 | INFO     |  -- lfn=log.46771637._077052.job.log.tgz.1, status_code=0, status=transferred
[2025-10-24 15:14:32] 2025-10-24 13:13:30,990 | INFO     | stage-out finished correctly
[2025-10-24 15:14:32] 2025-10-24 13:13:31,043 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-24 15:14:32] 2025-10-24 13:13:31,347 | INFO     | time since job start (3131s) is within the limit (172800.0s)
[2025-10-24 15:14:32] 2025-10-24 13:13:32,188 | INFO     | monitor loop #234: job 0:6853227333 is in state 'finished'
[2025-10-24 15:14:32] 2025-10-24 13:13:32,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 15:14:32] 2025-10-24 13:13:33,352 | INFO     | time since job start (3133s) is within the limit (172800.0s)
[2025-10-24 15:14:32] 2025-10-24 13:13:33,925 | INFO     | job 6853227333 has state=finished
[2025-10-24 15:14:32] 2025-10-24 13:13:33,925 | INFO     | preparing for final server update for job 6853227333 in state='finished'
[2025-10-24 15:14:32] 2025-10-24 13:13:33,925 | INFO     | this job has now completed (state=finished)
[2025-10-24 15:14:32] 2025-10-24 13:13:33,925 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-24 15:14:32] 2025-10-24 13:13:33,925 | INFO     | log transfer has been attempted: DONE
[2025-10-24 15:14:32] 2025-10-24 13:13:33,925 | INFO     | job 6853227333 has finished - writing final server update
[2025-10-24 15:14:32] 2025-10-24 13:13:33,926 | INFO     | total number of processed events: 400 (read)
[2025-10-24 15:14:32] 2025-10-24 13:13:33,926 | INFO     | executing command: lscpu
[2025-10-24 15:14:32] 2025-10-24 13:13:33,956 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-24 15:14:32] 2025-10-24 13:13:34,691 | INFO     | monitor loop #235: job 0:6853227333 is in state 'finished'
[2025-10-24 15:14:32] 2025-10-24 13:13:34,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 15:14:32] 2025-10-24 13:13:35,357 | INFO     | time since job start (3135s) is within the limit (172800.0s)
[2025-10-24 15:14:32] 2025-10-24 13:13:35,727 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 15:14:32] 2025-10-24 13:13:35,732 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2952.6239531249994
[2025-10-24 15:14:32] 2025-10-24 13:13:35,737 | INFO     | using path: /tmp/job_10717950/atlas/pilot/slots/0/PanDA_Pilot-6853227333/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 15:14:32] 2025-10-24 13:13:35,737 | INFO     | extracted standard info from prmon json
[2025-10-24 15:14:32] 2025-10-24 13:13:35,737 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 15:14:32] 2025-10-24 13:13:35,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 15:14:32] 2025-10-24 13:13:35,738 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 15:14:32] 2025-10-24 13:13:35,738 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 15:14:32] 2025-10-24 13:13:35,738 | INFO     | fitting pss+swap vs Time
[2025-10-24 15:14:32] 2025-10-24 13:13:35,738 | INFO     | sum of square deviations: 26400495.0
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | sum of deviations: 16907491.999999993
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | mean x: 1761310113.5
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | mean y: 2513583.1363636362
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | -- intersect: -1125470443.4328475
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | intersect: -1125470443.4328475
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | chi2: 0.0005731912638260376
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | -- intersect: -1125470443.4328475
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | current memory leak: 0.64 B/s (using 44 data points, chi2=0.00)
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | could have reported an average CPU frequency of 2642 MHz (5 samples)
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | ..............................
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | . Timing measurements:
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | . get job = 0 s
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | . initial setup = 1 s
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | . payload setup = 2 s
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | . stage-in = 0 s
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | . payload execution = 3110 s
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | . stage-out = 0 s
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | . log creation = 0 s
[2025-10-24 15:14:32] 2025-10-24 13:13:35,739 | INFO     | ..............................
[2025-10-24 15:14:32] 2025-10-24 13:13:35,790 | INFO     | 
[2025-10-24 15:14:32] 2025-10-24 13:13:35,790 | INFO     | job summary report
[2025-10-24 15:14:32] 2025-10-24 13:13:35,790 | INFO     | --------------------------------------------------
[2025-10-24 15:14:32] 2025-10-24 13:13:35,790 | INFO     | PanDA job id: 6853227333
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | task id: 46771637
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | errors: (none)
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | pilot state: finished 
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | transexitcode: 0
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | exeerrorcode: 0
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | exeerrordiag: 
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | exitcode: 0
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | exitmsg: OK
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | cpuconsumptiontime: 22658 s
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | nevents: 400
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | neventsw: 0
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | pid: 27821
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | pgrp: 27821
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | corecount: 8
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | event service: False
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | sizes: {0: 2349057, 2: 2349319, 11: 2349347, 3116: 2374928, 3118: 2384012, 3123: 2384182}
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | --------------------------------------------------
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | 
[2025-10-24 15:14:32] 2025-10-24 13:13:35,791 | INFO     | executing command: ls -lF /tmp/job_10717950/atlas/pilot/slots/0
[2025-10-24 15:14:32] 2025-10-24 13:13:35,799 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,799 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,799 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,799 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | job 6853227333 has completed (purged errors)
[2025-10-24 15:14:32] 2025-10-24 13:13:35,800 | INFO     | overall cleanup function is called
[2025-10-24 15:14:32] 2025-10-24 13:13:36,806 | INFO     | --- collectZombieJob: --- 10, [27821]
[2025-10-24 15:14:32] 2025-10-24 13:13:36,806 | INFO     | zombie collector waiting for pid 27821
[2025-10-24 15:14:32] 2025-10-24 13:13:36,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 15:14:32] 2025-10-24 13:13:36,806 | INFO     | collected zombie processes
[2025-10-24 15:14:32] 2025-10-24 13:13:36,806 | INFO     | will attempt to kill all subprocesses of pid=27821
[2025-10-24 15:14:32] 2025-10-24 13:13:36,921 | INFO     | process IDs to be killed: [27821] (in reverse order)
[2025-10-24 15:14:32] 2025-10-24 13:13:36,959 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 15:14:32] 2025-10-24 13:13:36,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 15:14:32] 2025-10-24 13:13:36,963 | INFO     | did not find any defunct processes belonging to 27821
[2025-10-24 15:14:32] 2025-10-24 13:13:36,967 | INFO     | did not find any defunct processes belonging to 27821
[2025-10-24 15:14:32] 2025-10-24 13:13:36,967 | INFO     | ready for new job
[2025-10-24 15:14:32] 2025-10-24 13:13:36,967 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 15:14:32] 2025-10-24 13:13:36,967 | INFO     | ***************************************
[2025-10-24 15:14:32] 2025-10-24 13:13:36,967 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 15:14:32] 2025-10-24 13:13:36,967 | INFO     | ***************************************
[2025-10-24 15:14:32] 2025-10-24 13:13:36,967 | INFO     | 
[2025-10-24 15:14:32] 2025-10-24 13:13:36,981 | INFO     | architecture information:
[2025-10-24 15:14:32] 2025-10-24 13:13:36,981 | INFO     | executing command: cat /etc/os-release
[2025-10-24 15:14:32] 2025-10-24 13:13:36,987 | INFO     | cat /etc/os-release:
[2025-10-24 15:14:32] NAME="CentOS Linux"
[2025-10-24 15:14:32] VERSION="7 (Core)"
[2025-10-24 15:14:32] ID="centos"
[2025-10-24 15:14:32] ID_LIKE="rhel fedora"
[2025-10-24 15:14:32] VERSION_ID="7"
[2025-10-24 15:14:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 15:14:32] ANSI_COLOR="0;31"
[2025-10-24 15:14:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 15:14:32] HOME_URL="https://www.centos.org/"
[2025-10-24 15:14:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 15:14:32] 
[2025-10-24 15:14:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 15:14:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 15:14:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 15:14:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 15:14:32] 
[2025-10-24 15:14:32] 2025-10-24 13:13:36,987 | INFO     | ***************************************
[2025-10-24 15:14:32] 2025-10-24 13:13:37,490 | INFO     | executing command: df -mP /tmp/job_10717950/atlas/pilot/slots/0
[2025-10-24 15:14:32] 2025-10-24 13:13:37,496 | INFO     | sufficient remaining disk space (223554306048 B)
[2025-10-24 15:14:32] 2025-10-24 13:13:37,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 15:14:32] 2025-10-24 13:13:37,496 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 15:14:32] 2025-10-24 13:13:37,496 | INFO     | update_server=False
[2025-10-24 15:14:32] 2025-10-24 13:13:37,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 15:14:32] 2025-10-24 13:13:37,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 15:14:32] 2025-10-24 13:13:37,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 15:14:32] 2025-10-24 13:13:37,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 15:14:32] 2025-10-24 13:13:37,830 | INFO     | all data control threads have been joined
[2025-10-24 15:14:32] 2025-10-24 13:13:37,981 | INFO     | all payload control threads have been joined
[2025-10-24 15:14:32] 2025-10-24 13:13:37,989 | INFO     | all job control threads have been joined
[2025-10-24 15:14:32] 2025-10-24 13:13:38,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 15:14:32] 2025-10-24 13:13:38,200 | INFO     | aborting loop
[2025-10-24 15:14:32] 2025-10-24 13:13:38,501 | INFO     | [job] retrieve thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:38,502 | INFO     | [job] queue monitor thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:38,568 | INFO     | [payload] validate_post thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:38,835 | INFO     | [data] control thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:38,987 | INFO     | [payload] control thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:38,994 | INFO     | [job] control thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:39,018 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:39,205 | INFO     | [job] job monitor thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:39,364 | INFO     | [job] validate thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:39,501 | INFO     | [data] copytool_out thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:39,559 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:39,629 | INFO     | [payload] failed_post thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:39,666 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:39,971 | INFO     | [data] copytool_in thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:41,502 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:13:48,331 | INFO     | job.realtimelogging is not enabled
[2025-10-24 15:14:32] 2025-10-24 13:13:49,337 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 15:14:32] 2025-10-24 13:14:08,559 | INFO     | PID=19714 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-24 15:14:32] 2025-10-24 13:14:08,559 | INFO     | .. there are 6 such processes running
[2025-10-24 15:14:32] 2025-10-24 13:14:08,560 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 15:14:32] 2025-10-24 13:14:08,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 15:14:32] 2025-10-24 13:14:08,560 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 15:14:32] 2025-10-24 13:14:24,841 | INFO     | [monitor] cgroup control has ended
[2025-10-24 15:14:32] 2025-10-24 13:14:26,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456064669440)>']
[2025-10-24 15:14:32] 2025-10-24 13:14:27,655 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 15:14:32] 2025-10-24 13:14:27,656 | INFO     | [monitor] control thread has ended
[2025-10-24 15:14:32] 2025-10-24 13:14:31,976 | INFO     | all workflow threads have been joined
[2025-10-24 15:14:32] 2025-10-24 13:14:31,976 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 15:14:32] 2025-10-24 13:14:31,976 | INFO     | traces error code: 0
[2025-10-24 15:14:32] 2025-10-24 13:14:31,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 15:14:32] 2025-10-24 13:14:32,034 [wrapper] ==== pilot stdout END ====
[2025-10-24 15:14:32] 2025-10-24 13:14:32,035 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 15:14:32] 2025-10-24 13:14:32,036 [wrapper] pilotpid: 19714
[2025-10-24 15:14:32] 2025-10-24 13:14:32,038 [wrapper] Pilot exit status: 0
[2025-10-24 15:14:32] 2025-10-24 13:14:32,042 [wrapper] pandaids: 6853227333
[2025-10-24 15:14:32] 2025-10-24 13:14:32,068 [wrapper] cleanup supervisor_pilot 27541 19715
[2025-10-24 15:14:32] 2025-10-24 13:14:32,070 [wrapper] Test setup, not cleaning
[2025-10-24 15:14:32] 2025-10-24 13:14:32,071 [wrapper] apfmon messages muted
[2025-10-24 15:14:32] 2025-10-24 13:14:32,072 [wrapper] ==== wrapper stdout END ====
[2025-10-24 15:14:32] 2025-10-24 13:14:32,073 [wrapper] ==== wrapper stderr END ====
[2025-10-24 15:14:32]  *** Error codes and diagnostics ***
[2025-10-24 15:14:32]     "exeErrorCode": 0,
[2025-10-24 15:14:32]     "exeErrorDiag": "",
[2025-10-24 15:14:32]     "pilotErrorCode": 0,
[2025-10-24 15:14:32]     "pilotErrorDiag": "",
[2025-10-24 15:14:32]  *** Listing of results directory ***
[2025-10-24 15:14:32] total 424476
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user    557409 Oct 22 01:28 pilot3.tar.gz
[2025-10-24 15:14:32] -rwx------ 1 mf493845 unix-user     36292 Oct 22 01:33 runpilot2-wrapper.sh
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user      5112 Oct 22 01:33 queuedata.json
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user       100 Oct 24 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 15:14:32] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 24 13:23 run_atlas
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user       105 Oct 24 13:23 job.xml
[2025-10-24 15:14:32] -rw-r--r-- 2 mf493845 unix-user 226270186 Oct 24 14:21 EVNT.46771634._003067.pool.root.1
[2025-10-24 15:14:32] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 24 14:21 start_atlas.sh
[2025-10-24 15:14:32] drwxrwx--x 2 mf493845 unix-user       100 Oct 24 14:21 shared
[2025-10-24 15:14:32] -rw-r--r-- 2 mf493845 unix-user    569674 Oct 24 14:21 input.tar.gz
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user      6394 Oct 24 14:21 init_data.xml
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user         0 Oct 24 14:21 boinc_setup_complete
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user      8192 Oct 24 14:21 boinc_mmap_file
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user         0 Oct 24 14:21 boinc_lockfile
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user      2560 Oct 24 14:21 pandaJob.out
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user    978572 Oct 24 14:21 agis_schedconf.cvmfs.json
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user   1560740 Oct 24 14:21 agis_ddmendpoints.agis.ALL.json
[2025-10-24 15:14:32] drwx------ 5 mf493845 unix-user       440 Oct 24 14:21 pilot3
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user 202928449 Oct 24 15:13 HITS.46771637._077052.pool.root.1
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user      1013 Oct 24 15:13 memory_monitor_summary.json
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user    301250 Oct 24 15:13 log.46771637._077052.job.log.tgz.1
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user      7766 Oct 24 15:13 heartbeat.json
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user        95 Oct 24 15:14 pilot_heartbeat.json
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user      4907 Oct 24 15:14 pilotlog.txt
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user    492415 Oct 24 15:14 log.46771637._077052.job.log.1
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user       357 Oct 24 15:14 output.list
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user       620 Oct 24 15:14 runtime_log
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user    808960 Oct 24 15:14 result.tar.gz
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user      9076 Oct 24 15:14 runtime_log.err
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user       644 Oct 24 15:14 FDAODmE2aV8n9Rq4apOajLDm4fhM0noT9bVof3QYDmuYgMDm9YPd9n.diag
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user     22217 Oct 24 15:14 stderr.txt
[2025-10-24 15:14:32] HITS file was successfully produced:
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user 202928449 Oct 24 15:13 shared/HITS.pool.root.1
[2025-10-24 15:14:32]  *** Contents of shared directory: ***
[2025-10-24 15:14:32] total 420512
[2025-10-24 15:14:32] -rw-r--r-- 2 mf493845 unix-user 226270186 Oct 24 14:21 ATLAS.root_0
[2025-10-24 15:14:32] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 24 14:21 start_atlas.sh
[2025-10-24 15:14:32] -rw-r--r-- 2 mf493845 unix-user    569674 Oct 24 14:21 input.tar.gz
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user 202928449 Oct 24 15:13 HITS.pool.root.1
[2025-10-24 15:14:32] -rw------- 1 mf493845 unix-user    808960 Oct 24 15:14 result.tar.gz
15:14:33 (14981): run_atlas exited; CPU time 22710.379051
15:14:33 (14981): called boinc_finish(0)

</stderr_txt>
]]>

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