Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
11:11:32 (3268071): wrapper (7.7.26015): starting
11:11:32 (3268071): wrapper: running run_atlas (--nthreads 4)
[2025-10-24 11:11:32] Arguments: --nthreads 4
[2025-10-24 11:11:32] Threads: 4
[2025-10-24 11:11:32] Checking for CVMFS
[2025-10-24 11:11:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 11:11:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 11:11:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 11:11:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 11:11:32] 2.13.2.0 7938 1189 60428 152073 3 9 3347522 4096000 13702 130560 0 8432866 99.998 52321 3181 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-10-24 11:11:32] CVMFS is ok
[2025-10-24 11:11:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 11:11:32] Checking for apptainer binary...
[2025-10-24 11:11:32] apptainer is not installed, using version from CVMFS
[2025-10-24 11:11:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 11:11:33] senture-c621e-l
[2025-10-24 11:11:33] apptainer works
[2025-10-24 11:11:33] Set ATHENA_PROC_NUMBER=4
[2025-10-24 11:11:33] Set ATHENA_CORE_NUMBER=4
[2025-10-24 11:11:33] Starting ATLAS job with PandaID=6855323795
[2025-10-24 11:11:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 14:21:09]  *** The last 200 lines of the pilot log: ***
[2025-10-24 14:21:09] 2025-10-24 13:20:25,601 | INFO     | found 32 cores (32 cores per socket, 1 socket) HT, CPU MHz: 2599.998000000001
[2025-10-24 14:21:09] 2025-10-24 13:20:25,611 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6855323795/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 14:21:09] 2025-10-24 13:20:25,612 | INFO     | extracted standard info from prmon json
[2025-10-24 14:21:09] 2025-10-24 13:20:25,612 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 14:21:09] 2025-10-24 13:20:25,612 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 14:21:09] 2025-10-24 13:20:25,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 14:21:09] 2025-10-24 13:20:25,612 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 14:21:09] 2025-10-24 13:20:25,616 | INFO     | fitting pss+swap vs Time
[2025-10-24 14:21:09] 2025-10-24 13:20:25,616 | INFO     | sum of square deviations: 1963274020.0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,617 | INFO     | sum of deviations: 5106070331.0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,617 | INFO     | mean x: 1761306345.0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,617 | INFO     | mean y: 2318772.3243243243
[2025-10-24 14:21:09] 2025-10-24 13:20:25,617 | INFO     | -- intersect: -4578475340.158532
[2025-10-24 14:21:09] 2025-10-24 13:20:25,617 | INFO     | intersect: -4578475340.158532
[2025-10-24 14:21:09] 2025-10-24 13:20:25,618 | INFO     | chi2: 1.2445603849277558
[2025-10-24 14:21:09] 2025-10-24 13:20:25,618 | INFO     | sum of square deviations: 1808350185.0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,619 | INFO     | sum of deviations: 5055666366.500001
[2025-10-24 14:21:09] 2025-10-24 13:20:25,619 | INFO     | mean x: 1761306192.5
[2025-10-24 14:21:09] 2025-10-24 13:20:25,619 | INFO     | mean y: 2318722.538888889
[2025-10-24 14:21:09] 2025-10-24 13:20:25,619 | INFO     | -- intersect: -4921825147.598977
[2025-10-24 14:21:09] 2025-10-24 13:20:25,619 | INFO     | intersect: -4921825147.598977
[2025-10-24 14:21:09] 2025-10-24 13:20:25,619 | INFO     | chi2: 1.2451531943376615
[2025-10-24 14:21:09] 2025-10-24 13:20:25,620 | INFO     | current chi2=1.2451531943376615 (change=-0.047632032730987484 %)
[2025-10-24 14:21:09] 2025-10-24 13:20:25,620 | INFO     | right removable region: 179
[2025-10-24 14:21:09] 2025-10-24 13:20:25,620 | INFO     | sum of square deviations: 1808350185.0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,621 | INFO     | sum of deviations: -14136413676.5
[2025-10-24 14:21:09] 2025-10-24 13:20:25,621 | INFO     | mean x: 1761306497.5
[2025-10-24 14:21:09] 2025-10-24 13:20:25,621 | INFO     | mean y: 2337378.716666667
[2025-10-24 14:21:09] 2025-10-24 13:20:25,621 | INFO     | -- intersect: 13770996494.797834
[2025-10-24 14:21:09] 2025-10-24 13:20:25,621 | INFO     | intersect: 13770996494.797834
[2025-10-24 14:21:09] 2025-10-24 13:20:25,621 | INFO     | chi2: 0.026941389054577627
[2025-10-24 14:21:09] 2025-10-24 13:20:25,621 | INFO     | current chi2=0.026941389054577627 (change=97.8352686313295 %)
[2025-10-24 14:21:09] 2025-10-24 13:20:25,622 | INFO     | sum of square deviations: 1661798600.0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,623 | INFO     | sum of deviations: -11325680167.999998
[2025-10-24 14:21:09] 2025-10-24 13:20:25,623 | INFO     | mean x: 1761306650.0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,623 | INFO     | mean y: 2334447.8857142855
[2025-10-24 14:21:09] 2025-10-24 13:20:25,623 | INFO     | -- intersect: 12006193276.309032
[2025-10-24 14:21:09] 2025-10-24 13:20:25,623 | INFO     | intersect: 12006193276.309032
[2025-10-24 14:21:09] 2025-10-24 13:20:25,623 | INFO     | chi2: 0.02315310267771942
[2025-10-24 14:21:09] 2025-10-24 13:20:25,623 | INFO     | current chi2=0.02315310267771942 (change=14.061214027175545 %)
[2025-10-24 14:21:09] 2025-10-24 13:20:25,623 | INFO     | left removable region: 20
[2025-10-24 14:21:09] 2025-10-24 13:20:25,624 | INFO     | sum of square deviations: 1246386160.0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,624 | INFO     | sum of deviations: -4551073116.0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,624 | INFO     | mean x: 1761306772.0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,624 | INFO     | mean y: 2327244.5786163523
[2025-10-24 14:21:09] 2025-10-24 13:20:25,625 | INFO     | -- intersect: 6433589205.220045
[2025-10-24 14:21:09] 2025-10-24 13:20:25,625 | INFO     | intersect: 6433589205.220045
[2025-10-24 14:21:09] 2025-10-24 13:20:25,625 | INFO     | chi2: 0.004668472447891608
[2025-10-24 14:21:09] 2025-10-24 13:20:25,625 | INFO     | -- intersect: 6433589205.220045
[2025-10-24 14:21:09] 2025-10-24 13:20:25,625 | INFO     | current memory leak: -3.65 B/s (using 159 data points, chi2=0.00)
[2025-10-24 14:21:09] 2025-10-24 13:20:25,626 | INFO     | could have reported an average CPU frequency of 2599 MHz (10 samples)
[2025-10-24 14:21:09] 2025-10-24 13:20:25,626 | INFO     | ..............................
[2025-10-24 14:21:09] 2025-10-24 13:20:25,626 | INFO     | . Timing measurements:
[2025-10-24 14:21:09] 2025-10-24 13:20:25,626 | INFO     | . get job = 0 s
[2025-10-24 14:21:09] 2025-10-24 13:20:25,626 | INFO     | . initial setup = 1 s
[2025-10-24 14:21:09] 2025-10-24 13:20:25,626 | INFO     | . payload setup = 6 s
[2025-10-24 14:21:09] 2025-10-24 13:20:25,626 | INFO     | . stage-in = 0 s
[2025-10-24 14:21:09] 2025-10-24 13:20:25,626 | INFO     | . payload execution = 11285 s
[2025-10-24 14:21:09] 2025-10-24 13:20:25,626 | INFO     | . stage-out = 1 s
[2025-10-24 14:21:09] 2025-10-24 13:20:25,626 | INFO     | . log creation = 0 s
[2025-10-24 14:21:09] 2025-10-24 13:20:25,626 | INFO     | ..............................
[2025-10-24 14:21:09] 2025-10-24 13:20:25,739 | INFO     | 
[2025-10-24 14:21:09] 2025-10-24 13:20:25,739 | INFO     | job summary report
[2025-10-24 14:21:09] 2025-10-24 13:20:25,739 | INFO     | --------------------------------------------------
[2025-10-24 14:21:09] 2025-10-24 13:20:25,739 | INFO     | PanDA job id: 6855323795
[2025-10-24 14:21:09] 2025-10-24 13:20:25,739 | INFO     | task id: 46771637
[2025-10-24 14:21:09] 2025-10-24 13:20:25,739 | INFO     | errors: (none)
[2025-10-24 14:21:09] 2025-10-24 13:20:25,739 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 14:21:09] 2025-10-24 13:20:25,739 | INFO     | pilot state: finished 
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | transexitcode: 0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | exeerrorcode: 0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | exeerrordiag: 
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | exitcode: 0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | exitmsg: OK
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | cpuconsumptiontime: 43544 s
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | nevents: 400
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | neventsw: 0
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | pid: 3279236
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | pgrp: 3279236
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | corecount: 4
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | event service: False
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | sizes: {0: 2348891, 5: 2349153, 11: 2349209, 11296: 2378378, 11298: 2387390, 11300: 2387446, 11305: 2387768}
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | --------------------------------------------------
[2025-10-24 14:21:09] 2025-10-24 13:20:25,740 | INFO     | 
[2025-10-24 14:21:09] 2025-10-24 13:20:25,741 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-24 14:21:09] 2025-10-24 13:20:25,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,772 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,772 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,772 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,773 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 14:21:09] 2025-10-24 13:20:25,774 | INFO     | job 6855323795 has completed (purged errors)
[2025-10-24 14:21:09] 2025-10-24 13:20:25,774 | INFO     | overall cleanup function is called
[2025-10-24 14:21:09] 2025-10-24 13:20:26,782 | INFO     | --- collectZombieJob: --- 10, [3279236]
[2025-10-24 14:21:09] 2025-10-24 13:20:26,782 | INFO     | zombie collector waiting for pid 3279236
[2025-10-24 14:21:09] 2025-10-24 13:20:26,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 14:21:09] 2025-10-24 13:20:26,782 | INFO     | collected zombie processes
[2025-10-24 14:21:09] 2025-10-24 13:20:26,782 | INFO     | will attempt to kill all subprocesses of pid=3279236
[2025-10-24 14:21:09] 2025-10-24 13:20:27,119 | INFO     | process IDs to be killed: [3279236] (in reverse order)
[2025-10-24 14:21:09] 2025-10-24 13:20:27,245 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 14:21:09] 2025-10-24 13:20:27,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 14:21:09] 2025-10-24 13:20:27,254 | INFO     | did not find any defunct processes belonging to 3279236
[2025-10-24 14:21:09] 2025-10-24 13:20:27,262 | INFO     | did not find any defunct processes belonging to 3279236
[2025-10-24 14:21:09] 2025-10-24 13:20:27,262 | INFO     | ready for new job
[2025-10-24 14:21:09] 2025-10-24 13:20:27,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 14:21:09] 2025-10-24 13:20:27,265 | INFO     | ***************************************
[2025-10-24 14:21:09] 2025-10-24 13:20:27,265 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 14:21:09] 2025-10-24 13:20:27,265 | INFO     | ***************************************
[2025-10-24 14:21:09] 2025-10-24 13:20:27,265 | INFO     | 
[2025-10-24 14:21:09] 2025-10-24 13:20:27,268 | INFO     | pilot is running in a VM
[2025-10-24 14:21:09] 2025-10-24 13:20:27,268 | INFO     | architecture information:
[2025-10-24 14:21:09] 2025-10-24 13:20:27,269 | INFO     | executing command: cat /etc/os-release
[2025-10-24 14:21:09] 2025-10-24 13:20:27,286 | INFO     | cat /etc/os-release:
[2025-10-24 14:21:09] NAME="CentOS Linux"
[2025-10-24 14:21:09] VERSION="7 (Core)"
[2025-10-24 14:21:09] ID="centos"
[2025-10-24 14:21:09] ID_LIKE="rhel fedora"
[2025-10-24 14:21:09] VERSION_ID="7"
[2025-10-24 14:21:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 14:21:09] ANSI_COLOR="0;31"
[2025-10-24 14:21:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 14:21:09] HOME_URL="https://www.centos.org/"
[2025-10-24 14:21:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 14:21:09] 
[2025-10-24 14:21:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 14:21:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 14:21:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 14:21:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 14:21:09] 
[2025-10-24 14:21:09] 2025-10-24 13:20:27,286 | INFO     | ***************************************
[2025-10-24 14:21:09] 2025-10-24 13:20:27,790 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-24 14:21:09] 2025-10-24 13:20:27,817 | INFO     | sufficient remaining disk space (110174928896 B)
[2025-10-24 14:21:09] 2025-10-24 13:20:27,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 14:21:09] 2025-10-24 13:20:27,818 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 14:21:09] 2025-10-24 13:20:27,818 | INFO     | update_server=False
[2025-10-24 14:21:09] 2025-10-24 13:20:27,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 14:21:09] 2025-10-24 13:20:27,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 14:21:09] 2025-10-24 13:20:27,942 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-24 14:21:09] 2025-10-24 13:20:27,942 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-24 14:21:09] 2025-10-24 13:20:27,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 14:21:09] 2025-10-24 13:20:27,942 | INFO     | will abort loop
[2025-10-24 14:21:09] 2025-10-24 13:20:28,512 | INFO     | all data control threads have been joined
[2025-10-24 14:21:09] 2025-10-24 13:20:28,824 | INFO     | [job] retrieve thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:28,884 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:28,948 | INFO     | [job] job monitor thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:29,032 | INFO     | all payload control threads have been joined
[2025-10-24 14:21:09] 2025-10-24 13:20:29,224 | INFO     | all job control threads have been joined
[2025-10-24 14:21:09] 2025-10-24 13:20:29,256 | INFO     | [payload] validate_post thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:29,364 | INFO     | [data] copytool_in thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:29,517 | INFO     | [data] control thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:29,824 | INFO     | [data] copytool_out thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:29,952 | INFO     | [job] validate thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:29,984 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:30,038 | INFO     | [payload] control thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:30,082 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:30,124 | INFO     | [payload] failed_post thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:30,229 | INFO     | [job] control thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:30,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 14:21:09] 2025-10-24 13:20:30,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 14:21:09] 2025-10-24 13:20:31,729 | INFO     | [job] queue monitor thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:34,945 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:38,287 | INFO     | job.realtimelogging is not enabled
[2025-10-24 14:21:09] 2025-10-24 13:20:39,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 14:21:09] 2025-10-24 13:20:58,756 | INFO     | PID=3272037 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 14:21:09] 2025-10-24 13:20:58,757 | INFO     | .. there are 16 such processes running
[2025-10-24 14:21:09] 2025-10-24 13:20:58,757 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 14:21:09] 2025-10-24 13:20:58,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 14:21:09] 2025-10-24 13:20:58,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 14:21:09] 2025-10-24 13:21:03,286 | INFO     | [monitor] cgroup control has ended
[2025-10-24 14:21:09] 2025-10-24 13:21:04,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136866445973312)>', '<ExcThread(monitor, started 136865617266432)>']
[2025-10-24 14:21:09] 2025-10-24 13:21:04,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 14:21:09] 2025-10-24 13:21:04,789 | INFO     | [monitor] control thread has ended
[2025-10-24 14:21:09] 2025-10-24 13:21:09,412 | INFO     | all workflow threads have been joined
[2025-10-24 14:21:09] 2025-10-24 13:21:09,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 14:21:09] 2025-10-24 13:21:09,412 | INFO     | traces error code: 0
[2025-10-24 14:21:09] 2025-10-24 13:21:09,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 14:21:09] 2025-10-24 13:21:09,580 [wrapper] ==== pilot stdout END ====
[2025-10-24 14:21:09] 2025-10-24 13:21:09,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 14:21:09] 2025-10-24 13:21:09,586 [wrapper] pilotpid: 3272037
[2025-10-24 14:21:09] 2025-10-24 13:21:09,590 [wrapper] Pilot exit status: 0
[2025-10-24 14:21:09] 2025-10-24 13:21:09,601 [wrapper] pandaids: 6855323795
[2025-10-24 14:21:09] 2025-10-24 13:21:09,665 [wrapper] cleanup supervisor_pilot 3792260 3272038
[2025-10-24 14:21:09] 2025-10-24 13:21:09,669 [wrapper] Test setup, not cleaning
[2025-10-24 14:21:09] 2025-10-24 13:21:09,673 [wrapper] apfmon messages muted
[2025-10-24 14:21:09] 2025-10-24 13:21:09,676 [wrapper] ==== wrapper stdout END ====
[2025-10-24 14:21:09] 2025-10-24 13:21:09,679 [wrapper] ==== wrapper stderr END ====
[2025-10-24 14:21:09]  *** Error codes and diagnostics ***
[2025-10-24 14:21:09]     "exeErrorCode": 0,
[2025-10-24 14:21:09]     "exeErrorDiag": "",
[2025-10-24 14:21:09]     "pilotErrorCode": 0,
[2025-10-24 14:21:09]     "pilotErrorDiag": "",
[2025-10-24 14:21:09]  *** Listing of results directory ***
[2025-10-24 14:21:09] total 430576
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc    557409 Oct 24 01:25 pilot3.tar.gz
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc      5112 Oct 24 02:11 queuedata.json
[2025-10-24 14:21:09] -rwx------ 1 boinc boinc     36292 Oct 24 02:14 runpilot2-wrapper.sh
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc       100 Oct 24 11:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 14:21:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 24 11:11 run_atlas
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc       105 Oct 24 11:11 job.xml
[2025-10-24 14:21:09] -rw-r--r-- 2 boinc boinc 227448391 Oct 24 11:11 EVNT.46771634._004601.pool.root.1
[2025-10-24 14:21:09] -rw-r--r-- 2 boinc boinc    569691 Oct 24 11:11 input.tar.gz
[2025-10-24 14:21:09] -rw-r--r-- 2 boinc boinc     15120 Oct 24 11:11 start_atlas.sh
[2025-10-24 14:21:09] drwxrwx--x 2 boinc boinc      4096 Oct 24 11:11 shared
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc         0 Oct 24 11:11 boinc_setup_complete
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc      6664 Oct 24 11:11 init_data.xml
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc         0 Oct 24 11:11 boinc_lockfile
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc      2561 Oct 24 11:11 pandaJob.out
[2025-10-24 14:21:09] -rw------- 1 boinc boinc    978578 Oct 24 11:11 agis_schedconf.cvmfs.json
[2025-10-24 14:21:09] drwx------ 5 boinc boinc      4096 Oct 24 11:11 pilot3
[2025-10-24 14:21:09] -rw------- 1 boinc boinc 205633732 Oct 24 14:19 HITS.46771637._115339.pool.root.1
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc       531 Oct 24 14:19 boinc_task_state.xml
[2025-10-24 14:21:09] -rw------- 1 boinc boinc        95 Oct 24 14:20 pilot_heartbeat.json
[2025-10-24 14:21:09] -rw------- 1 boinc boinc      1033 Oct 24 14:20 memory_monitor_summary.json
[2025-10-24 14:21:09] -rw------- 1 boinc boinc   1560772 Oct 24 14:20 agis_ddmendpoints.agis.ALL.json
[2025-10-24 14:21:09] -rw------- 1 boinc boinc    366771 Oct 24 14:20 log.46771637._115339.job.log.tgz.1
[2025-10-24 14:21:09] -rw------- 1 boinc boinc      7793 Oct 24 14:20 heartbeat.json
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc      8192 Oct 24 14:20 boinc_mmap_file
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc        28 Oct 24 14:20 wrapper_checkpoint.txt
[2025-10-24 14:21:09] -rw------- 1 boinc boinc      5152 Oct 24 14:21 pilotlog.txt
[2025-10-24 14:21:09] -rw------- 1 boinc boinc   1593918 Oct 24 14:21 log.46771637._115339.job.log.1
[2025-10-24 14:21:09] -rw------- 1 boinc boinc       357 Oct 24 14:21 output.list
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc       620 Oct 24 14:21 runtime_log
[2025-10-24 14:21:09] -rw------- 1 boinc boinc   1976320 Oct 24 14:21 result.tar.gz
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc      8793 Oct 24 14:21 runtime_log.err
[2025-10-24 14:21:09] -rw------- 1 boinc boinc       653 Oct 24 14:21 n87NDmdYLW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmKQkMDmdkfQ0m.diag
[2025-10-24 14:21:09] -rw-r--r-- 1 boinc boinc     20795 Oct 24 14:21 stderr.txt
[2025-10-24 14:21:09] HITS file was successfully produced:
[2025-10-24 14:21:09] -rw------- 1 boinc boinc 205633732 Oct 24 14:19 shared/HITS.pool.root.1
[2025-10-24 14:21:09]  *** Contents of shared directory: ***
[2025-10-24 14:21:09] total 425452
[2025-10-24 14:21:09] -rw-r--r-- 2 boinc boinc 227448391 Oct 24 11:11 ATLAS.root_0
[2025-10-24 14:21:09] -rw-r--r-- 2 boinc boinc    569691 Oct 24 11:11 input.tar.gz
[2025-10-24 14:21:09] -rw-r--r-- 2 boinc boinc     15120 Oct 24 11:11 start_atlas.sh
[2025-10-24 14:21:09] -rw------- 1 boinc boinc 205633732 Oct 24 14:19 HITS.pool.root.1
[2025-10-24 14:21:09] -rw------- 1 boinc boinc   1976320 Oct 24 14:21 result.tar.gz
14:21:11 (3268071): run_atlas exited; CPU time 43941.602022
14:21:11 (3268071): called boinc_finish(0)

</stderr_txt>
]]>

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