Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:55:06 (791763): wrapper (7.7.26015): starting
21:55:06 (791763): wrapper: running run_atlas (--nthreads 4)
[2025-10-24 21:55:06] Arguments: --nthreads 4
[2025-10-24 21:55:06] Threads: 4
[2025-10-24 21:55:06] Checking for CVMFS
[2025-10-24 21:55:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 21:55:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 21:55:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 21:55:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 21:55:06] 2.9.2.0 3124 2451 93668 152093 0 57 30679071 36864001 0 130560 0 2034109 99.990 99756 1014 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-24 21:55:06] CVMFS is ok
[2025-10-24 21:55:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 21:55:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 21:55:06] Further information can be found at the LHC@home message board.
[2025-10-24 21:55:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 21:55:06] Checking for apptainer binary...
[2025-10-24 21:55:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 21:55:06] Running /usr/bin/apptainer --version
[2025-10-24 21:55:06] apptainer version 1.4.1-1.1
[2025-10-24 21:55:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 21:55:06] belleA267b
[2025-10-24 21:55:06] apptainer works
[2025-10-24 21:55:06] Set ATHENA_PROC_NUMBER=4
[2025-10-24 21:55:06] Set ATHENA_CORE_NUMBER=4
[2025-10-24 21:55:06] Starting ATLAS job with PandaID=6857389663
[2025-10-24 21:55:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 23:14:26]  *** The last 200 lines of the pilot log: ***
[2025-10-24 23:14:26]  mtime=0
[2025-10-24 23:14:26]  protocol_id=None
[2025-10-24 23:14:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-24 23:14:26]  replicas=None
[2025-10-24 23:14:26]  scope=mc23_13p6TeV
[2025-10-24 23:14:26]  status=None
[2025-10-24 23:14:26]  status_code=0
[2025-10-24 23:14:26]  storage_token=
[2025-10-24 23:14:26]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6857389663/log.46964913._000390.job.log.tgz.1
[2025-10-24 23:14:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/d0/log.46964913._000390.job.log.tgz.1
[2025-10-24 23:14:26]  workdir=None
[2025-10-24 23:14:26] ]
[2025-10-24 23:14:26] 2025-10-24 21:13:16,156 | INFO     | transferring file log.46964913._000390.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6857389663/log.46964913._000390.job.log.tgz.1 to /local/data/boinc/
[2025-10-24 23:14:26] 2025-10-24 21:13:16,156 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6857389663/log.46964913._000390.job.log.tgz.1 /local/data/boinc/slots/0/log.46964913._0003
[2025-10-24 23:14:26] 2025-10-24 21:13:16,176 | INFO     | adding to output.list: log.46964913._000390.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/d0/log.46964913._000390.job.log.tg
[2025-10-24 23:14:26] 2025-10-24 21:13:16,177 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-24 23:14:26] 2025-10-24 21:13:16,177 | INFO     | summary of transferred files:
[2025-10-24 23:14:26] 2025-10-24 21:13:16,177 | INFO     |  -- lfn=log.46964913._000390.job.log.tgz.1, status_code=0, status=transferred
[2025-10-24 23:14:26] 2025-10-24 21:13:16,177 | INFO     | stage-out finished correctly
[2025-10-24 23:14:26] 2025-10-24 21:13:16,216 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-24 23:14:26] 2025-10-24 21:13:16,254 | INFO     | job 6857389663 has state=finished
[2025-10-24 23:14:26] 2025-10-24 21:13:16,254 | INFO     | preparing for final server update for job 6857389663 in state='finished'
[2025-10-24 23:14:26] 2025-10-24 21:13:16,255 | INFO     | this job has now completed (state=finished)
[2025-10-24 23:14:26] 2025-10-24 21:13:16,255 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-24 23:14:26] 2025-10-24 21:13:16,255 | INFO     | log transfer has been attempted: DONE
[2025-10-24 23:14:26] 2025-10-24 21:13:16,255 | INFO     | job 6857389663 has finished - writing final server update
[2025-10-24 23:14:26] 2025-10-24 21:13:16,255 | INFO     | total number of processed events: 400 (read)
[2025-10-24 23:14:26] 2025-10-24 21:13:16,255 | INFO     | executing command: lscpu
[2025-10-24 23:14:26] 2025-10-24 21:13:16,274 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-24 23:14:26] 2025-10-24 21:13:16,887 | INFO     | time since job start (4682s) is within the limit (172800.0s)
[2025-10-24 23:14:26] 2025-10-24 21:13:17,736 | INFO     | monitor loop #361: job 0:6857389663 is in state 'finished'
[2025-10-24 23:14:26] 2025-10-24 21:13:17,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 23:14:26] 2025-10-24 21:13:18,893 | INFO     | time since job start (4684s) is within the limit (172800.0s)
[2025-10-24 23:14:26] 2025-10-24 21:13:20,240 | INFO     | monitor loop #362: job 0:6857389663 is in state 'finished'
[2025-10-24 23:14:26] 2025-10-24 21:13:20,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 23:14:26] 2025-10-24 21:13:20,899 | INFO     | time since job start (4686s) is within the limit (172800.0s)
[2025-10-24 23:14:26] 2025-10-24 21:13:21,986 | INFO     | PID=795558 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-24 23:14:26] 2025-10-24 21:13:22,198 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 23:14:26] 2025-10-24 21:13:22,199 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3295.438624999999
[2025-10-24 23:14:26] 2025-10-24 21:13:22,201 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6857389663/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 23:14:26] 2025-10-24 21:13:22,201 | INFO     | extracted standard info from prmon json
[2025-10-24 23:14:26] 2025-10-24 21:13:22,201 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 23:14:26] 2025-10-24 21:13:22,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 23:14:26] 2025-10-24 21:13:22,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 23:14:26] 2025-10-24 21:13:22,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 23:14:26] 2025-10-24 21:13:22,202 | INFO     | fitting pss+swap vs Time
[2025-10-24 23:14:26] 2025-10-24 21:13:22,202 | INFO     | sum of square deviations: 106336877.5
[2025-10-24 23:14:26] 2025-10-24 21:13:22,202 | INFO     | sum of deviations: -7241255649.0
[2025-10-24 23:14:26] 2025-10-24 21:13:22,202 | INFO     | mean x: 1761338147.5
[2025-10-24 23:14:26] 2025-10-24 21:13:22,202 | INFO     | mean y: 2478183.342857143
[2025-10-24 23:14:26] 2025-10-24 21:13:22,202 | INFO     | -- intersect: 119944873617.92358
[2025-10-24 23:14:26] 2025-10-24 21:13:22,202 | INFO     | intersect: 119944873617.92358
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | chi2: 0.09985300083040506
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | -- intersect: 119944873617.92358
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | current memory leak: -68.10 B/s (using 70 data points, chi2=0.10)
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | could have reported an average CPU frequency of 3614 MHz (6 samples)
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | ..............................
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | . Timing measurements:
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | . get job = 0 s
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | . initial setup = 1 s
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | . payload setup = 4 s
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | . stage-in = 0 s
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | . payload execution = 4658 s
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | . stage-out = 0 s
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | . log creation = 0 s
[2025-10-24 23:14:26] 2025-10-24 21:13:22,203 | INFO     | ..............................
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | 
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | job summary report
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | --------------------------------------------------
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | PanDA job id: 6857389663
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | task id: 46964913
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | errors: (none)
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | pilot state: finished 
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | transexitcode: 0
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | exeerrorcode: 0
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | exeerrordiag: 
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | exitcode: 0
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | exitmsg: OK
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | cpuconsumptiontime: 17744 s
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | nevents: 400
[2025-10-24 23:14:26] 2025-10-24 21:13:22,243 | INFO     | neventsw: 0
[2025-10-24 23:14:26] 2025-10-24 21:13:22,244 | INFO     | pid: 802138
[2025-10-24 23:14:26] 2025-10-24 21:13:22,244 | INFO     | pgrp: 802138
[2025-10-24 23:14:26] 2025-10-24 21:13:22,244 | INFO     | corecount: 4
[2025-10-24 23:14:26] 2025-10-24 21:13:22,244 | INFO     | event service: False
[2025-10-24 23:14:26] 2025-10-24 21:13:22,244 | INFO     | sizes: {0: 2348100, 1: 2348959, 4: 2349221, 11: 2349249, 4666: 2375577, 4667: 2384765, 4673: 2384903}
[2025-10-24 23:14:26] 2025-10-24 21:13:22,244 | INFO     | --------------------------------------------------
[2025-10-24 23:14:26] 2025-10-24 21:13:22,244 | INFO     | 
[2025-10-24 23:14:26] 2025-10-24 21:13:22,244 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,262 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 23:14:26] 2025-10-24 21:13:22,263 | INFO     | job 6857389663 has completed (purged errors)
[2025-10-24 23:14:26] 2025-10-24 21:13:22,263 | INFO     | overall cleanup function is called
[2025-10-24 23:14:26] 2025-10-24 21:13:23,269 | INFO     | --- collectZombieJob: --- 10, [802138]
[2025-10-24 23:14:26] 2025-10-24 21:13:23,269 | INFO     | zombie collector waiting for pid 802138
[2025-10-24 23:14:26] 2025-10-24 21:13:23,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 23:14:26] 2025-10-24 21:13:23,270 | INFO     | collected zombie processes
[2025-10-24 23:14:26] 2025-10-24 21:13:23,270 | INFO     | will attempt to kill all subprocesses of pid=802138
[2025-10-24 23:14:26] 2025-10-24 21:13:23,312 | INFO     | process IDs to be killed: [802138] (in reverse order)
[2025-10-24 23:14:26] 2025-10-24 21:13:23,344 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 23:14:26] 2025-10-24 21:13:23,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 23:14:26] 2025-10-24 21:13:23,346 | INFO     | did not find any defunct processes belonging to 802138
[2025-10-24 23:14:26] 2025-10-24 21:13:23,348 | INFO     | did not find any defunct processes belonging to 802138
[2025-10-24 23:14:26] 2025-10-24 21:13:23,348 | INFO     | ready for new job
[2025-10-24 23:14:26] 2025-10-24 21:13:23,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 23:14:26] 2025-10-24 21:13:23,349 | INFO     | ***************************************
[2025-10-24 23:14:26] 2025-10-24 21:13:23,349 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 23:14:26] 2025-10-24 21:13:23,349 | INFO     | ***************************************
[2025-10-24 23:14:26] 2025-10-24 21:13:23,349 | INFO     | 
[2025-10-24 23:14:26] 2025-10-24 21:13:23,349 | INFO     | architecture information:
[2025-10-24 23:14:26] 2025-10-24 21:13:23,349 | INFO     | executing command: cat /etc/os-release
[2025-10-24 23:14:26] 2025-10-24 21:13:23,363 | INFO     | cat /etc/os-release:
[2025-10-24 23:14:26] NAME="CentOS Linux"
[2025-10-24 23:14:26] VERSION="7 (Core)"
[2025-10-24 23:14:26] ID="centos"
[2025-10-24 23:14:26] ID_LIKE="rhel fedora"
[2025-10-24 23:14:26] VERSION_ID="7"
[2025-10-24 23:14:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 23:14:26] ANSI_COLOR="0;31"
[2025-10-24 23:14:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 23:14:26] HOME_URL="https://www.centos.org/"
[2025-10-24 23:14:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 23:14:26] 
[2025-10-24 23:14:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 23:14:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 23:14:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 23:14:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 23:14:26] 
[2025-10-24 23:14:26] 2025-10-24 21:13:23,363 | INFO     | ***************************************
[2025-10-24 23:14:26] 2025-10-24 21:13:23,866 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-24 23:14:26] 2025-10-24 21:13:23,884 | INFO     | sufficient remaining disk space (328695021568 B)
[2025-10-24 23:14:26] 2025-10-24 21:13:23,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 23:14:26] 2025-10-24 21:13:23,885 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 23:14:26] 2025-10-24 21:13:23,885 | INFO     | update_server=False
[2025-10-24 23:14:26] 2025-10-24 21:13:23,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 23:14:26] 2025-10-24 21:13:23,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 23:14:26] 2025-10-24 21:13:23,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 23:14:26] 2025-10-24 21:13:23,885 | INFO     | aborting loop
[2025-10-24 23:14:26] 2025-10-24 21:13:23,914 | INFO     | all payload control threads have been joined
[2025-10-24 23:14:26] 2025-10-24 21:13:24,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 23:14:26] 2025-10-24 21:13:24,536 | INFO     | all job control threads have been joined
[2025-10-24 23:14:26] 2025-10-24 21:13:24,616 | INFO     | all data control threads have been joined
[2025-10-24 23:14:26] 2025-10-24 21:13:24,890 | INFO     | [job] retrieve thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:24,891 | INFO     | [job] queue monitor thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:24,891 | INFO     | [job] job monitor thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:24,920 | INFO     | [payload] control thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:25,506 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:25,541 | INFO     | [job] control thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:25,614 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:25,622 | INFO     | [data] control thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:25,768 | INFO     | [job] validate thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:25,872 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:25,955 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:26,097 | INFO     | [payload] failed_post thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:26,144 | INFO     | [payload] validate_post thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:26,235 | INFO     | [data] copytool_out thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:26,341 | INFO     | [data] copytool_in thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:26,764 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 23:14:26] 2025-10-24 21:13:30,771 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 23:14:26] 2025-10-24 21:13:54,107 | INFO     | PID=795558 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-24 23:14:26] 2025-10-24 21:13:54,107 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 23:14:26] 2025-10-24 21:13:54,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 23:14:26] 2025-10-24 21:13:54,107 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 23:14:26] 2025-10-24 21:14:19,713 | INFO     | [monitor] cgroup control has ended
[2025-10-24 23:14:26] 2025-10-24 21:14:21,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140390036555584)>', '<ExcThread(monitor, started 140388648085248)>']
[2025-10-24 23:14:26] 2025-10-24 21:14:22,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 23:14:26] 2025-10-24 21:14:22,256 | INFO     | [monitor] control thread has ended
[2025-10-24 23:14:26] 2025-10-24 21:14:26,364 | INFO     | all workflow threads have been joined
[2025-10-24 23:14:26] 2025-10-24 21:14:26,364 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 23:14:26] 2025-10-24 21:14:26,364 | INFO     | traces error code: 0
[2025-10-24 23:14:26] 2025-10-24 21:14:26,364 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 23:14:26] 2025-10-24 21:14:26,442 [wrapper] ==== pilot stdout END ====
[2025-10-24 23:14:26] 2025-10-24 21:14:26,447 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 23:14:26] 2025-10-24 21:14:26,450 [wrapper] pilotpid: 795558
[2025-10-24 23:14:26] 2025-10-24 21:14:26,454 [wrapper] Pilot exit status: 0
[2025-10-24 23:14:26] 2025-10-24 21:14:26,466 [wrapper] pandaids: 6857389663
[2025-10-24 23:14:26] 2025-10-24 21:14:26,489 [wrapper] cleanup supervisor_pilot  814256 795559
[2025-10-24 23:14:26] 2025-10-24 21:14:26,492 [wrapper] Test setup, not cleaning
[2025-10-24 23:14:26] 2025-10-24 21:14:26,496 [wrapper] apfmon messages muted
[2025-10-24 23:14:26] 2025-10-24 21:14:26,500 [wrapper] ==== wrapper stdout END ====
[2025-10-24 23:14:26] 2025-10-24 21:14:26,503 [wrapper] ==== wrapper stderr END ====
[2025-10-24 23:14:26]  *** Error codes and diagnostics ***
[2025-10-24 23:14:26]     "exeErrorCode": 0,
[2025-10-24 23:14:26]     "exeErrorDiag": "",
[2025-10-24 23:14:26]     "pilotErrorCode": 0,
[2025-10-24 23:14:26]     "pilotErrorDiag": "",
[2025-10-24 23:14:26]  *** Listing of results directory ***
[2025-10-24 23:14:26] total 402016
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc    557409 Oct 24 05:30 pilot3.tar.gz
[2025-10-24 23:14:26] -rwx------ 1 boinc boinc     36292 Oct 24 05:53 runpilot2-wrapper.sh
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc      5112 Oct 24 05:53 queuedata.json
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc       100 Oct 24 21:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 23:14:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 24 21:55 run_atlas
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc       105 Oct 24 21:55 job.xml
[2025-10-24 23:14:26] -rw-r--r-- 2 boinc boinc 233906246 Oct 24 21:55 EVNT.46964904._000016.pool.root.1
[2025-10-24 23:14:26] -rw-r--r-- 2 boinc boinc    569667 Oct 24 21:55 input.tar.gz
[2025-10-24 23:14:26] -rw-r--r-- 2 boinc boinc     15120 Oct 24 21:55 start_atlas.sh
[2025-10-24 23:14:26] drwxrwx--x 2 boinc boinc      4096 Oct 24 21:55 shared
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc         0 Oct 24 21:55 boinc_setup_complete
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc      6378 Oct 24 21:55 init_data.xml
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc         0 Oct 24 21:55 boinc_lockfile
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc      2557 Oct 24 21:55 pandaJob.out
[2025-10-24 23:14:26] -rw------- 1 boinc boinc    978597 Oct 24 21:55 agis_schedconf.cvmfs.json
[2025-10-24 23:14:26] -rw------- 1 boinc boinc   1560772 Oct 24 21:55 agis_ddmendpoints.agis.ALL.json
[2025-10-24 23:14:26] drwx------ 5 boinc boinc      4096 Oct 24 21:55 pilot3
[2025-10-24 23:14:26] -rw------- 1 boinc boinc 171934667 Oct 24 23:12 HITS.46964913._000390.pool.root.1
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc       529 Oct 24 23:13 boinc_task_state.xml
[2025-10-24 23:14:26] -rw------- 1 boinc boinc      1025 Oct 24 23:13 memory_monitor_summary.json
[2025-10-24 23:14:26] -rw------- 1 boinc boinc    266859 Oct 24 23:13 log.46964913._000390.job.log.tgz.1
[2025-10-24 23:14:26] -rw------- 1 boinc boinc      7770 Oct 24 23:13 heartbeat.json
[2025-10-24 23:14:26] -rw------- 1 boinc boinc        95 Oct 24 23:13 pilot_heartbeat.json
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc        27 Oct 24 23:14 wrapper_checkpoint.txt
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc      8192 Oct 24 23:14 boinc_mmap_file
[2025-10-24 23:14:26] -rw------- 1 boinc boinc      4751 Oct 24 23:14 pilotlog.txt
[2025-10-24 23:14:26] -rw------- 1 boinc boinc    690826 Oct 24 23:14 log.46964913._000390.job.log.1
[2025-10-24 23:14:26] -rw------- 1 boinc boinc       357 Oct 24 23:14 output.list
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc       620 Oct 24 23:14 runtime_log
[2025-10-24 23:14:26] -rw------- 1 boinc boinc    972800 Oct 24 23:14 result.tar.gz
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc      8797 Oct 24 23:14 runtime_log.err
[2025-10-24 23:14:26] -rw------- 1 boinc boinc       662 Oct 24 23:14 FebMDmt2NW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoiAODm2GV4wn.diag
[2025-10-24 23:14:26] -rw-r--r-- 1 boinc boinc     21784 Oct 24 23:14 stderr.txt
[2025-10-24 23:14:26] HITS file was successfully produced:
[2025-10-24 23:14:26] -rw------- 1 boinc boinc 171934667 Oct 24 23:12 shared/HITS.pool.root.1
[2025-10-24 23:14:26]  *** Contents of shared directory: ***
[2025-10-24 23:14:26] total 397872
[2025-10-24 23:14:26] -rw-r--r-- 2 boinc boinc 233906246 Oct 24 21:55 ATLAS.root_0
[2025-10-24 23:14:26] -rw-r--r-- 2 boinc boinc    569667 Oct 24 21:55 input.tar.gz
[2025-10-24 23:14:26] -rw-r--r-- 2 boinc boinc     15120 Oct 24 21:55 start_atlas.sh
[2025-10-24 23:14:26] -rw------- 1 boinc boinc 171934667 Oct 24 23:12 HITS.pool.root.1
[2025-10-24 23:14:26] -rw------- 1 boinc boinc    972800 Oct 24 23:14 result.tar.gz
23:14:27 (791763): run_atlas exited; CPU time 17754.687887
23:14:27 (791763): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN