Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:07:02 (769720): wrapper (7.7.26015): starting
05:07:02 (769720): wrapper: running run_atlas (--nthreads 8)
[2025-10-24 05:07:02] Arguments: --nthreads 8
[2025-10-24 05:07:02] Threads: 8
[2025-10-24 05:07:02] Checking for CVMFS
[2025-10-24 05:07:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 05:07:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 05:07:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 05:07:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 05:07:03] 2.13.2.0 7534 94415 116348 152069 2 232 39039747 40960000 27567 16776704 0 597607028 99.783 329437836 45150 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-24 05:07:03] CVMFS is ok
[2025-10-24 05:07:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 05:07:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 05:07:03] Further information can be found at the LHC@home message board.
[2025-10-24 05:07:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 05:07:03] Checking for apptainer binary...
[2025-10-24 05:07:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 05:07:03] Running /usr/bin/apptainer --version
[2025-10-24 05:07:04] apptainer version 1.4.3-1.el9
[2025-10-24 05:07:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 05:07:04] c-208-39.aglt2.org
[2025-10-24 05:07:04] apptainer works
[2025-10-24 05:07:04] Set ATHENA_PROC_NUMBER=8
[2025-10-24 05:07:04] Set ATHENA_CORE_NUMBER=8
[2025-10-24 05:07:04] Starting ATLAS job with PandaID=6855074936
[2025-10-24 05:07:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 06:42:46]  *** The last 200 lines of the pilot log: ***
[2025-10-24 06:42:47] 2025-10-24 10:41:56,447 | INFO     | time since job start (5672s) is within the limit (172800.0s)
[2025-10-24 06:42:47] 2025-10-24 10:41:56,785 | INFO     | number of running child processes to parent process 798316: 1
[2025-10-24 06:42:47] 2025-10-24 10:41:56,785 | INFO     | maximum number of monitored processes: 6
[2025-10-24 06:42:47] 2025-10-24 10:41:57,908 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-24 06:42:47] 2025-10-24 10:41:58,456 | INFO     | time since job start (5674s) is within the limit (172800.0s)
[2025-10-24 06:42:47] 2025-10-24 10:41:59,290 | INFO     | monitor loop #370: job 0:6855074936 is in state 'finished'
[2025-10-24 06:42:47] 2025-10-24 10:41:59,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 06:42:47] 2025-10-24 10:42:00,465 | INFO     | time since job start (5676s) is within the limit (172800.0s)
[2025-10-24 06:42:47] 2025-10-24 10:42:00,960 | INFO     | job 6855074936 has state=finished
[2025-10-24 06:42:47] 2025-10-24 10:42:00,960 | INFO     | preparing for final server update for job 6855074936 in state='finished'
[2025-10-24 06:42:47] 2025-10-24 10:42:00,961 | INFO     | this job has now completed (state=finished)
[2025-10-24 06:42:47] 2025-10-24 10:42:00,961 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-24 06:42:47] 2025-10-24 10:42:00,961 | INFO     | log transfer has been attempted: DONE
[2025-10-24 06:42:47] 2025-10-24 10:42:00,961 | INFO     | job 6855074936 has finished - writing final server update
[2025-10-24 06:42:47] 2025-10-24 10:42:00,961 | INFO     | total number of processed events: 400 (read)
[2025-10-24 06:42:47] 2025-10-24 10:42:00,962 | INFO     | executing command: lscpu
[2025-10-24 06:42:47] 2025-10-24 10:42:01,025 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-24 06:42:47] 2025-10-24 10:42:01,807 | INFO     | monitor loop #371: job 0:6855074936 is in state 'finished'
[2025-10-24 06:42:47] 2025-10-24 10:42:01,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 06:42:47] 2025-10-24 10:42:02,224 | INFO     | PID=775646 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 06:42:47] 2025-10-24 10:42:02,224 | INFO     | .. there are 30 such processes running
[2025-10-24 06:42:47] 2025-10-24 10:42:03,225 | INFO     | time since job start (5679s) is within the limit (172800.0s)
[2025-10-24 06:42:47] 2025-10-24 10:42:04,332 | INFO     | monitor loop #372: job 0:6855074936 is in state 'finished'
[2025-10-24 06:42:47] 2025-10-24 10:42:04,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 06:42:47] 2025-10-24 10:42:05,232 | INFO     | time since job start (5681s) is within the limit (172800.0s)
[2025-10-24 06:42:47] 2025-10-24 10:42:06,836 | INFO     | monitor loop #373: job 0:6855074936 is in state 'finished'
[2025-10-24 06:42:47] 2025-10-24 10:42:06,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 06:42:47] 2025-10-24 10:42:07,239 | INFO     | time since job start (5683s) is within the limit (172800.0s)
[2025-10-24 06:42:47] 2025-10-24 10:42:07,239 | INFO     | 5685s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-24 06:42:47] 2025-10-24 10:42:09,246 | INFO     | time since job start (5685s) is within the limit (172800.0s)
[2025-10-24 06:42:47] 2025-10-24 10:42:09,342 | INFO     | monitor loop #374: job 0:6855074936 is in state 'finished'
[2025-10-24 06:42:47] 2025-10-24 10:42:09,342 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 06:42:47] 2025-10-24 10:42:11,253 | INFO     | time since job start (5687s) is within the limit (172800.0s)
[2025-10-24 06:42:47] 2025-10-24 10:42:11,847 | INFO     | monitor loop #375: job 0:6855074936 is in state 'finished'
[2025-10-24 06:42:47] 2025-10-24 10:42:11,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 06:42:47] 2025-10-24 10:42:12,079 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-24 06:42:47] 2025-10-24 10:42:12,088 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3715.942773437499
[2025-10-24 06:42:47] 2025-10-24 10:42:12,113 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6855074936/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 06:42:47] 2025-10-24 10:42:12,113 | INFO     | extracted standard info from prmon json
[2025-10-24 06:42:47] 2025-10-24 10:42:12,113 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 06:42:47] 2025-10-24 10:42:12,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 06:42:47] 2025-10-24 10:42:12,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 06:42:47] 2025-10-24 10:42:12,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 06:42:47] 2025-10-24 10:42:12,115 | INFO     | fitting pss+swap vs Time
[2025-10-24 06:42:47] 2025-10-24 10:42:12,119 | INFO     | sum of square deviations: 197200405.45348847
[2025-10-24 06:42:47] 2025-10-24 10:42:12,119 | INFO     | sum of deviations: 566934671.3837209
[2025-10-24 06:42:47] 2025-10-24 10:42:12,119 | INFO     | mean x: 1761299778.5232558
[2025-10-24 06:42:47] 2025-10-24 10:42:12,119 | INFO     | mean y: 2497606.0581395347
[2025-10-24 06:42:47] 2025-10-24 10:42:12,119 | INFO     | -- intersect: -5061091938.035459
[2025-10-24 06:42:47] 2025-10-24 10:42:12,119 | INFO     | intersect: -5061091938.035459
[2025-10-24 06:42:47] 2025-10-24 10:42:12,119 | INFO     | chi2: 0.00510850323921802
[2025-10-24 06:42:47] 2025-10-24 10:42:12,119 | INFO     | -- intersect: -5061091938.035459
[2025-10-24 06:42:47] 2025-10-24 10:42:12,119 | INFO     | current memory leak: 2.87 B/s (using 86 data points, chi2=0.01)
[2025-10-24 06:42:47] 2025-10-24 10:42:12,120 | INFO     | could have reported an average CPU frequency of 3673 MHz (7 samples)
[2025-10-24 06:42:47] 2025-10-24 10:42:12,120 | INFO     | ..............................
[2025-10-24 06:42:47] 2025-10-24 10:42:12,120 | INFO     | . Timing measurements:
[2025-10-24 06:42:47] 2025-10-24 10:42:12,120 | INFO     | . get job = 0 s
[2025-10-24 06:42:47] 2025-10-24 10:42:12,120 | INFO     | . initial setup = 2 s
[2025-10-24 06:42:47] 2025-10-24 10:42:12,120 | INFO     | . payload setup = 11 s
[2025-10-24 06:42:47] 2025-10-24 10:42:12,120 | INFO     | . stage-in = 0 s
[2025-10-24 06:42:47] 2025-10-24 10:42:12,120 | INFO     | . payload execution = 5635 s
[2025-10-24 06:42:47] 2025-10-24 10:42:12,120 | INFO     | . stage-out = 1 s
[2025-10-24 06:42:47] 2025-10-24 10:42:12,120 | INFO     | . log creation = 0 s
[2025-10-24 06:42:47] 2025-10-24 10:42:12,120 | INFO     | ..............................
[2025-10-24 06:42:47] 2025-10-24 10:42:12,499 | INFO     | 
[2025-10-24 06:42:47] 2025-10-24 10:42:12,499 | INFO     | job summary report
[2025-10-24 06:42:47] 2025-10-24 10:42:12,499 | INFO     | --------------------------------------------------
[2025-10-24 06:42:47] 2025-10-24 10:42:12,499 | INFO     | PanDA job id: 6855074936
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | task id: 46771637
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | errors: (none)
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | pilot state: finished 
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | transexitcode: 0
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | exeerrorcode: 0
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | exeerrordiag: 
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | exitcode: 0
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | exitmsg: OK
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | cpuconsumptiontime: 27398 s
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | nevents: 400
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | neventsw: 0
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | pid: 798316
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | pgrp: 798316
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | corecount: 8
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | event service: False
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | sizes: {0: 2348708, 1: 2348963, 8: 2349225, 11: 2349253, 5650: 2375986, 5651: 2375985, 5652: 2385167, 5655: 2385223, 5669: 2385417}
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | --------------------------------------------------
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | 
[2025-10-24 06:42:47] 2025-10-24 10:42:12,500 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-24 06:42:47] 2025-10-24 10:42:12,524 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,524 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,524 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,524 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | job 6855074936 has completed (purged errors)
[2025-10-24 06:42:47] 2025-10-24 10:42:12,525 | INFO     | overall cleanup function is called
[2025-10-24 06:42:47] 2025-10-24 10:42:13,533 | INFO     | --- collectZombieJob: --- 10, [798316]
[2025-10-24 06:42:47] 2025-10-24 10:42:13,534 | INFO     | zombie collector waiting for pid 798316
[2025-10-24 06:42:47] 2025-10-24 10:42:13,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 06:42:47] 2025-10-24 10:42:13,534 | INFO     | collected zombie processes
[2025-10-24 06:42:47] 2025-10-24 10:42:13,534 | INFO     | will attempt to kill all subprocesses of pid=798316
[2025-10-24 06:42:47] 2025-10-24 10:42:13,956 | INFO     | process IDs to be killed: [798316] (in reverse order)
[2025-10-24 06:42:47] 2025-10-24 10:42:14,117 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 06:42:47] 2025-10-24 10:42:14,117 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 06:42:47] 2025-10-24 10:42:14,139 | INFO     | did not find any defunct processes belonging to 798316
[2025-10-24 06:42:47] 2025-10-24 10:42:14,159 | INFO     | did not find any defunct processes belonging to 798316
[2025-10-24 06:42:47] 2025-10-24 10:42:14,159 | INFO     | ready for new job
[2025-10-24 06:42:47] 2025-10-24 10:42:14,160 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 06:42:47] 2025-10-24 10:42:14,161 | INFO     | ***************************************
[2025-10-24 06:42:47] 2025-10-24 10:42:14,161 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 06:42:47] 2025-10-24 10:42:14,161 | INFO     | ***************************************
[2025-10-24 06:42:47] 2025-10-24 10:42:14,161 | INFO     | 
[2025-10-24 06:42:47] 2025-10-24 10:42:14,166 | INFO     | architecture information:
[2025-10-24 06:42:47] 2025-10-24 10:42:14,166 | INFO     | executing command: cat /etc/os-release
[2025-10-24 06:42:47] 2025-10-24 10:42:14,202 | INFO     | cat /etc/os-release:
[2025-10-24 06:42:47] NAME="CentOS Linux"
[2025-10-24 06:42:47] VERSION="7 (Core)"
[2025-10-24 06:42:47] ID="centos"
[2025-10-24 06:42:47] ID_LIKE="rhel fedora"
[2025-10-24 06:42:47] VERSION_ID="7"
[2025-10-24 06:42:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 06:42:47] ANSI_COLOR="0;31"
[2025-10-24 06:42:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 06:42:47] HOME_URL="https://www.centos.org/"
[2025-10-24 06:42:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 06:42:47] 
[2025-10-24 06:42:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 06:42:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 06:42:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 06:42:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 06:42:47] 
[2025-10-24 06:42:47] 2025-10-24 10:42:14,203 | INFO     | ***************************************
[2025-10-24 06:42:47] 2025-10-24 10:42:14,705 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-24 06:42:47] 2025-10-24 10:42:14,745 | INFO     | sufficient remaining disk space (168363556864 B)
[2025-10-24 06:42:47] 2025-10-24 10:42:14,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 06:42:47] 2025-10-24 10:42:14,745 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 06:42:47] 2025-10-24 10:42:14,745 | INFO     | update_server=False
[2025-10-24 06:42:47] 2025-10-24 10:42:14,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 06:42:47] 2025-10-24 10:42:15,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 06:42:47] 2025-10-24 10:42:15,362 | INFO     | aborting loop
[2025-10-24 06:42:47] 2025-10-24 10:42:15,547 | INFO     | all data control threads have been joined
[2025-10-24 06:42:47] 2025-10-24 10:42:15,674 | INFO     | all payload control threads have been joined
[2025-10-24 06:42:47] 2025-10-24 10:42:15,751 | INFO     | [job] retrieve thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:15,772 | INFO     | [data] copytool_in thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:15,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 06:42:47] 2025-10-24 10:42:16,054 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:16,243 | INFO     | all job control threads have been joined
[2025-10-24 06:42:47] 2025-10-24 10:42:16,246 | INFO     | [job] validate thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:16,368 | INFO     | [job] job monitor thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:16,552 | INFO     | [data] control thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:16,680 | INFO     | [payload] control thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:16,968 | INFO     | [payload] validate_post thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:17,003 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:17,006 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:17,212 | INFO     | [payload] failed_post thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:17,248 | INFO     | [job] control thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:17,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 06:42:47] 2025-10-24 10:42:17,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 06:42:47] 2025-10-24 10:42:17,947 | INFO     | [data] copytool_out thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:18,258 | INFO     | [job] queue monitor thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:21,536 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:25,444 | INFO     | job.realtimelogging is not enabled
[2025-10-24 06:42:47] 2025-10-24 10:42:26,450 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 06:42:47] 2025-10-24 10:42:33,357 | INFO     | [monitor] cgroup control has ended
[2025-10-24 06:42:47] 2025-10-24 10:42:35,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555203737408)>', '<ExcThread(monitor, started 140554834777856)>']
[2025-10-24 06:42:47] 2025-10-24 10:42:40,279 | INFO     | all workflow threads have been joined
[2025-10-24 06:42:47] 2025-10-24 10:42:40,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 06:42:47] 2025-10-24 10:42:40,279 | INFO     | traces error code: 0
[2025-10-24 06:42:47] 2025-10-24 10:42:40,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 06:42:47] 2025-10-24 10:42:45,259 | INFO     | PID=775646 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-24 06:42:47] 2025-10-24 10:42:45,259 | INFO     | .. there are 30 such processes running
[2025-10-24 06:42:47] 2025-10-24 10:42:45,259 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 06:42:47] 2025-10-24 10:42:45,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 06:42:47] 2025-10-24 10:42:45,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 06:42:47] 2025-10-24 10:42:45,259 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 06:42:47] 2025-10-24 10:42:45,259 | INFO     | [monitor] control thread has ended
[2025-10-24 06:42:47] 2025-10-24 10:42:45,821 [wrapper] ==== pilot stdout END ====
[2025-10-24 06:42:47] 2025-10-24 10:42:45,828 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 06:42:47] 2025-10-24 10:42:45,843 [wrapper] pilotpid: 775646
[2025-10-24 06:42:47] 2025-10-24 10:42:45,874 [wrapper] Pilot exit status: 0
[2025-10-24 06:42:47] 2025-10-24 10:42:46,193 [wrapper] pandaids: 6855074936
[2025-10-24 06:42:47] 2025-10-24 10:42:46,446 [wrapper] cleanup supervisor_pilot 1160651 775647
[2025-10-24 06:42:47] 2025-10-24 10:42:46,456 [wrapper] Test setup, not cleaning
[2025-10-24 06:42:47] 2025-10-24 10:42:46,466 [wrapper] apfmon messages muted
[2025-10-24 06:42:47] 2025-10-24 10:42:46,469 [wrapper] ==== wrapper stdout END ====
[2025-10-24 06:42:47] 2025-10-24 10:42:46,471 [wrapper] ==== wrapper stderr END ====
[2025-10-24 06:42:47]  *** Error codes and diagnostics ***
[2025-10-24 06:42:47]     "exeErrorCode": 0,
[2025-10-24 06:42:47]     "exeErrorDiag": "",
[2025-10-24 06:42:47]     "pilotErrorCode": 0,
[2025-10-24 06:42:47]     "pilotErrorDiag": "",
[2025-10-24 06:42:47]  *** Listing of results directory ***
[2025-10-24 06:42:47] total 437756
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas    557409 Oct 23 16:24 pilot3.tar.gz
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas      5112 Oct 23 17:16 queuedata.json
[2025-10-24 06:42:47] -rwx------. 1 boincer umatlas     36292 Oct 23 17:19 runpilot2-wrapper.sh
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas       100 Oct 24 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 06:42:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 24 05:06 run_atlas
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas       105 Oct 24 05:06 job.xml
[2025-10-24 06:42:47] -rw-r--r--. 2 boincer umatlas 230957672 Oct 24 05:07 EVNT.46771634._004472.pool.root.1
[2025-10-24 06:42:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 24 05:07 start_atlas.sh
[2025-10-24 06:42:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 24 05:07 shared
[2025-10-24 06:42:47] -rw-r--r--. 2 boincer umatlas    569689 Oct 24 05:07 input.tar.gz
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas         0 Oct 24 05:07 boinc_lockfile
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas      2562 Oct 24 05:07 pandaJob.out
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas    978570 Oct 24 05:07 agis_schedconf.cvmfs.json
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas   1560740 Oct 24 05:07 agis_ddmendpoints.agis.ALL.json
[2025-10-24 06:42:47] drwx------. 5 boincer umatlas      4096 Oct 24 05:07 pilot3
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas      7174 Oct 24 06:39 init_data.xml
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas 211146865 Oct 24 06:41 HITS.46771637._112033.pool.root.1
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas       529 Oct 24 06:41 boinc_task_state.xml
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas      1062 Oct 24 06:41 memory_monitor_summary.json
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas    351754 Oct 24 06:41 log.46771637._112033.job.log.tgz.1
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas        95 Oct 24 06:42 pilot_heartbeat.json
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas      7803 Oct 24 06:42 heartbeat.json
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 24 06:42 boinc_mmap_file
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas        27 Oct 24 06:42 wrapper_checkpoint.txt
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas       822 Oct 24 06:42 pilotlog.txt
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas    778867 Oct 24 06:42 log.46771637._112033.job.log.1
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas       357 Oct 24 06:42 output.list
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas       620 Oct 24 06:42 runtime_log
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas   1146880 Oct 24 06:42 result.tar.gz
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas      8703 Oct 24 06:42 runtime_log.err
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas       657 Oct 24 06:42 fEtLDmWtHW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgn9NDm92VyRo.diag
[2025-10-24 06:42:47] -rw-r--r--. 1 boincer umatlas     22249 Oct 24 06:42 stderr.txt
[2025-10-24 06:42:47] HITS file was successfully produced:
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas 211146865 Oct 24 06:41 shared/HITS.pool.root.1
[2025-10-24 06:42:47]  *** Contents of shared directory: ***
[2025-10-24 06:42:47] total 433448
[2025-10-24 06:42:47] -rw-r--r--. 2 boincer umatlas 230957672 Oct 24 05:07 ATLAS.root_0
[2025-10-24 06:42:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 24 05:07 start_atlas.sh
[2025-10-24 06:42:47] -rw-r--r--. 2 boincer umatlas    569689 Oct 24 05:07 input.tar.gz
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas 211146865 Oct 24 06:41 HITS.pool.root.1
[2025-10-24 06:42:47] -rw-------. 1 boincer umatlas   1146880 Oct 24 06:42 result.tar.gz
06:42:48 (769720): run_atlas exited; CPU time 27556.370816
06:42:48 (769720): called boinc_finish(0)

</stderr_txt>
]]>

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