Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:34:42 (17996): wrapper (7.7.26015): starting
20:34:42 (17996): wrapper: running run_atlas (--nthreads 8)
[2025-10-24 20:34:42] Arguments: --nthreads 8
[2025-10-24 20:34:42] Threads: 8
[2025-10-24 20:34:42] Checking for CVMFS
[2025-10-24 20:34:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 20:34:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 20:34:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 20:34:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 20:34:45] 2.11.2.0 18345 238150 139712 152092 0 210 21931782 25165825 4538 130560 0 112407430 99.898 66281733 3010 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-24 20:34:45] CVMFS is ok
[2025-10-24 20:34:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 20:34:45] Checking for apptainer binary...
[2025-10-24 20:34:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 20:34:45] Running /usr/bin/apptainer --version
[2025-10-24 20:34:45] apptainer version 1.3.2-1.el7
[2025-10-24 20:34:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 20:34:52] cg-vwn239.simple-grid.lan
[2025-10-24 20:34:52] apptainer works
[2025-10-24 20:34:52] Set ATHENA_PROC_NUMBER=8
[2025-10-24 20:34:52] Set ATHENA_CORE_NUMBER=8
[2025-10-24 20:34:52] Starting ATLAS job with PandaID=6855324445
[2025-10-24 20:34:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-25 01:25:21]  *** The last 200 lines of the pilot log: ***
[2025-10-25 01:25:21] 2025-10-24 23:24:16,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-25 01:25:21] 2025-10-24 23:24:16,330 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-25 01:25:21] 2025-10-24 23:24:16,331 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-25 01:25:21] 2025-10-24 23:24:16,333 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6855324445/memory_monitor_summary.json (trf name=prmon)
[2025-10-25 01:25:21] 2025-10-24 23:24:16,333 | INFO     | extracted standard info from prmon json
[2025-10-25 01:25:21] 2025-10-24 23:24:16,334 | INFO     | extracted standard memory fields from prmon json
[2025-10-25 01:25:21] 2025-10-24 23:24:16,334 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-25 01:25:21] 2025-10-24 23:24:16,334 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-25 01:25:21] 2025-10-24 23:24:16,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-25 01:25:21] 2025-10-24 23:24:16,340 | INFO     | fitting pss+swap vs Time
[2025-10-25 01:25:21] 2025-10-24 23:24:16,340 | INFO     | sum of square deviations: 6239923508.0
[2025-10-25 01:25:21] 2025-10-24 23:24:16,343 | INFO     | sum of deviations: 52640482773.999985
[2025-10-25 01:25:21] 2025-10-24 23:24:16,343 | INFO     | mean x: 1761339869.5
[2025-10-25 01:25:21] 2025-10-24 23:24:16,343 | INFO     | mean y: 2471447.2279411764
[2025-10-25 01:25:21] 2025-10-24 23:24:16,343 | INFO     | -- intersect: -14856329456.453606
[2025-10-25 01:25:21] 2025-10-24 23:24:16,343 | INFO     | intersect: -14856329456.453606
[2025-10-25 01:25:21] 2025-10-24 23:24:16,344 | INFO     | chi2: 4.370035680459374
[2025-10-25 01:25:21] 2025-10-24 23:24:16,344 | INFO     | sum of square deviations: 5902093918.0
[2025-10-25 01:25:21] 2025-10-24 23:24:16,347 | INFO     | sum of deviations: 69450857406.0
[2025-10-25 01:25:21] 2025-10-24 23:24:16,347 | INFO     | mean x: 1761339717.0
[2025-10-25 01:25:21] 2025-10-24 23:24:16,347 | INFO     | mean y: 2478915.205992509
[2025-10-25 01:25:21] 2025-10-24 23:24:16,347 | INFO     | -- intersect: -20723479571.463314
[2025-10-25 01:25:21] 2025-10-24 23:24:16,347 | INFO     | intersect: -20723479571.463314
[2025-10-25 01:25:21] 2025-10-24 23:24:16,348 | INFO     | chi2: 3.6261281309130116
[2025-10-25 01:25:21] 2025-10-24 23:24:16,348 | INFO     | current chi2=3.6261281309130116 (change=17.0229170638754 %)
[2025-10-25 01:25:21] 2025-10-24 23:24:16,348 | INFO     | right removable region: 266
[2025-10-25 01:25:21] 2025-10-24 23:24:16,348 | INFO     | sum of square deviations: 5902093918.0
[2025-10-25 01:25:21] 2025-10-24 23:24:16,351 | INFO     | sum of deviations: -27727542253.0
[2025-10-25 01:25:21] 2025-10-24 23:24:16,351 | INFO     | mean x: 1761340022.0
[2025-10-25 01:25:21] 2025-10-24 23:24:16,351 | INFO     | mean y: 2507648.801498127
[2025-10-25 01:25:21] 2025-10-24 23:24:16,351 | INFO     | -- intersect: 8277135358.970877
[2025-10-25 01:25:21] 2025-10-24 23:24:16,351 | INFO     | intersect: 8277135358.970877
[2025-10-25 01:25:21] 2025-10-24 23:24:16,352 | INFO     | chi2: 0.9985892951382502
[2025-10-25 01:25:21] 2025-10-24 23:24:16,352 | INFO     | current chi2=0.9985892951382502 (change=77.14917295519015 %)
[2025-10-25 01:25:21] 2025-10-24 23:24:16,353 | INFO     | sum of square deviations: 5576683165.5
[2025-10-25 01:25:21] 2025-10-24 23:24:16,355 | INFO     | sum of deviations: -39101325343.5
[2025-10-25 01:25:21] 2025-10-24 23:24:16,355 | INFO     | mean x: 1761340174.5
[2025-10-25 01:25:21] 2025-10-24 23:24:16,355 | INFO     | mean y: 2512945.1259541987
[2025-10-25 01:25:21] 2025-10-24 23:24:16,355 | INFO     | -- intersect: 12352279492.698265
[2025-10-25 01:25:21] 2025-10-24 23:24:16,356 | INFO     | intersect: 12352279492.698265
[2025-10-25 01:25:21] 2025-10-24 23:24:16,356 | INFO     | chi2: 0.8981909194217746
[2025-10-25 01:25:21] 2025-10-24 23:24:16,356 | INFO     | current chi2=0.8981909194217746 (change=10.05402082770934 %)
[2025-10-25 01:25:21] 2025-10-24 23:24:16,356 | INFO     | left removable region: 20
[2025-10-25 01:25:21] 2025-10-24 23:24:16,357 | INFO     | sum of square deviations: 4616114457.5
[2025-10-25 01:25:21] 2025-10-24 23:24:16,359 | INFO     | sum of deviations: -10298907915.999998
[2025-10-25 01:25:21] 2025-10-24 23:24:16,359 | INFO     | mean x: 1761340296.5
[2025-10-25 01:25:21] 2025-10-24 23:24:16,359 | INFO     | mean y: 2515812.2926829266
[2025-10-25 01:25:21] 2025-10-24 23:24:16,359 | INFO     | -- intersect: 3932202064.5304255
[2025-10-25 01:25:21] 2025-10-24 23:24:16,359 | INFO     | intersect: 3932202064.5304255
[2025-10-25 01:25:21] 2025-10-24 23:24:16,360 | INFO     | chi2: 0.07150092885998847
[2025-10-25 01:25:21] 2025-10-24 23:24:16,360 | INFO     | -- intersect: 3932202064.5304255
[2025-10-25 01:25:21] 2025-10-24 23:24:16,360 | INFO     | current memory leak: -2.23 B/s (using 246 data points, chi2=0.07)
[2025-10-25 01:25:21] 2025-10-24 23:24:16,361 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-25 01:25:21] 2025-10-24 23:24:16,361 | INFO     | ..............................
[2025-10-25 01:25:21] 2025-10-24 23:24:16,361 | INFO     | . Timing measurements:
[2025-10-25 01:25:21] 2025-10-24 23:24:16,361 | INFO     | . get job = 0 s
[2025-10-25 01:25:21] 2025-10-24 23:24:16,361 | INFO     | . initial setup = 9 s
[2025-10-25 01:25:21] 2025-10-24 23:24:16,361 | INFO     | . payload setup = 132 s
[2025-10-25 01:25:21] 2025-10-24 23:24:16,362 | INFO     | . stage-in = 0 s
[2025-10-25 01:25:21] 2025-10-24 23:24:16,362 | INFO     | . payload execution = 16690 s
[2025-10-25 01:25:21] 2025-10-24 23:24:16,362 | INFO     | . stage-out = 5 s
[2025-10-25 01:25:21] 2025-10-24 23:24:16,362 | INFO     | . log creation = 1 s
[2025-10-25 01:25:21] 2025-10-24 23:24:16,362 | INFO     | ..............................
[2025-10-25 01:25:21] 2025-10-24 23:24:16,533 | INFO     | 
[2025-10-25 01:25:21] 2025-10-24 23:24:16,533 | INFO     | job summary report
[2025-10-25 01:25:21] 2025-10-24 23:24:16,533 | INFO     | --------------------------------------------------
[2025-10-25 01:25:21] 2025-10-24 23:24:16,533 | INFO     | PanDA job id: 6855324445
[2025-10-25 01:25:21] 2025-10-24 23:24:16,533 | INFO     | task id: 46771637
[2025-10-25 01:25:21] 2025-10-24 23:24:16,533 | INFO     | errors: (none)
[2025-10-25 01:25:21] 2025-10-24 23:24:16,533 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | pilot state: finished 
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | transexitcode: 0
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | exeerrorcode: 0
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | exeerrordiag: 
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | exitcode: 0
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | exitmsg: OK
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | cpuconsumptiontime: 62977 s
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | nevents: 400
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | neventsw: 0
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | pid: 28381
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | pgrp: 28381
[2025-10-25 01:25:21] 2025-10-24 23:24:16,534 | INFO     | corecount: 8
[2025-10-25 01:25:21] 2025-10-24 23:24:16,535 | INFO     | event service: False
[2025-10-25 01:25:21] 2025-10-24 23:24:16,535 | INFO     | sizes: {0: 2348764, 1: 2348963, 12: 2348963, 23: 2348991, 33: 2349019, 44: 2349075, 55: 2349231, 66: 2349259, 76: 2349287, 87: 2349343, 98: 2349371, 99: 2349941, 1
[2025-10-25 01:25:21] 2025-10-24 23:24:16,535 | INFO     | --------------------------------------------------
[2025-10-25 01:25:21] 2025-10-24 23:24:16,535 | INFO     | 
[2025-10-25 01:25:21] 2025-10-24 23:24:16,535 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-25 01:25:21] 2025-10-24 23:24:17,162 | INFO     | time since job start (17135s) is within the limit (172800.0s)
[2025-10-25 01:25:21] 2025-10-24 23:24:17,184 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-25 01:25:21] 2025-10-24 23:24:17,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-25 01:25:21] 2025-10-24 23:24:17,186 | INFO     | job 6855324445 has completed (purged errors)
[2025-10-25 01:25:21] 2025-10-24 23:24:17,186 | INFO     | overall cleanup function is called
[2025-10-25 01:25:21] 2025-10-24 23:24:18,196 | INFO     | --- collectZombieJob: --- 10, [28381]
[2025-10-25 01:25:21] 2025-10-24 23:24:18,196 | INFO     | zombie collector waiting for pid 28381
[2025-10-25 01:25:21] 2025-10-24 23:24:18,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-25 01:25:21] 2025-10-24 23:24:18,196 | INFO     | collected zombie processes
[2025-10-25 01:25:21] 2025-10-24 23:24:18,196 | INFO     | will attempt to kill all subprocesses of pid=28381
[2025-10-25 01:25:21] 2025-10-24 23:24:18,325 | INFO     | process IDs to be killed: [28381] (in reverse order)
[2025-10-25 01:25:21] 2025-10-24 23:24:19,035 | WARNING  | found no corresponding commands to process id(s)
[2025-10-25 01:25:21] 2025-10-24 23:24:19,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-25 01:25:21] 2025-10-24 23:24:19,038 | INFO     | did not find any defunct processes belonging to 28381
[2025-10-25 01:25:21] 2025-10-24 23:24:19,042 | INFO     | did not find any defunct processes belonging to 28381
[2025-10-25 01:25:21] 2025-10-24 23:24:19,042 | INFO     | ready for new job
[2025-10-25 01:25:21] 2025-10-24 23:24:19,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-25 01:25:21] 2025-10-24 23:24:19,050 | INFO     | ***************************************
[2025-10-25 01:25:21] 2025-10-24 23:24:19,050 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-25 01:25:21] 2025-10-24 23:24:19,050 | INFO     | ***************************************
[2025-10-25 01:25:21] 2025-10-24 23:24:19,050 | INFO     | 
[2025-10-25 01:25:21] 2025-10-24 23:24:19,051 | INFO     | pilot is running in a VM
[2025-10-25 01:25:21] 2025-10-24 23:24:19,051 | INFO     | architecture information:
[2025-10-25 01:25:21] 2025-10-24 23:24:19,057 | INFO     | executing command: cat /etc/os-release
[2025-10-25 01:25:21] 2025-10-24 23:24:19,313 | INFO     | cat /etc/os-release:
[2025-10-25 01:25:21] NAME="CentOS Linux"
[2025-10-25 01:25:21] VERSION="7 (Core)"
[2025-10-25 01:25:21] ID="centos"
[2025-10-25 01:25:21] ID_LIKE="rhel fedora"
[2025-10-25 01:25:21] VERSION_ID="7"
[2025-10-25 01:25:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-25 01:25:21] ANSI_COLOR="0;31"
[2025-10-25 01:25:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-25 01:25:21] HOME_URL="https://www.centos.org/"
[2025-10-25 01:25:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-25 01:25:21] 
[2025-10-25 01:25:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-25 01:25:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-25 01:25:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-25 01:25:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-25 01:25:21] 
[2025-10-25 01:25:21] 2025-10-24 23:24:19,313 | INFO     | ***************************************
[2025-10-25 01:25:21] 2025-10-24 23:24:19,817 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-25 01:25:21] 2025-10-24 23:24:20,074 | INFO     | sufficient remaining disk space (496623419392 B)
[2025-10-25 01:25:21] 2025-10-24 23:24:20,074 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-25 01:25:21] 2025-10-24 23:24:20,074 | INFO     | current server update state: UPDATING_FINAL
[2025-10-25 01:25:21] 2025-10-24 23:24:20,074 | INFO     | update_server=False
[2025-10-25 01:25:21] 2025-10-24 23:24:20,074 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-25 01:25:21] 2025-10-24 23:24:20,085 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-25 01:25:21] 2025-10-24 23:24:20,085 | INFO     | aborting loop
[2025-10-25 01:25:21] 2025-10-24 23:24:20,247 | INFO     | all data control threads have been joined
[2025-10-25 01:25:21] 2025-10-24 23:24:20,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-25 01:25:21] 2025-10-24 23:24:20,531 | INFO     | all job control threads have been joined
[2025-10-25 01:25:21] 2025-10-24 23:24:20,595 | INFO     | all payload control threads have been joined
[2025-10-25 01:25:21] 2025-10-24 23:24:20,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-25 01:25:21] 2025-10-24 23:24:21,084 | INFO     | [job] retrieve thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:21,091 | INFO     | [job] job monitor thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:21,253 | INFO     | [data] control thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:21,449 | INFO     | [payload] validate_pre thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:21,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-25 01:25:21] 2025-10-24 23:24:21,537 | INFO     | [job] control thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:21,601 | INFO     | [payload] control thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:21,652 | INFO     | [payload] execute_payloads thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:21,717 | INFO     | [payload] validate_post thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:22,289 | INFO     | [job] create_data_payload thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:22,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:22,450 | INFO     | [data] copytool_out thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:22,508 | INFO     | [job] validate thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:22,516 | INFO     | [job] queue monitor thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:22,534 | INFO     | [payload] failed_post thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:22,585 | INFO     | [data] copytool_in thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:25,002 | INFO     | [data] queue_monitor thread has finished
[2025-10-25 01:25:21] 2025-10-24 23:24:50,357 | INFO     | PID=21802 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-25 01:25:21] 2025-10-24 23:24:50,357 | INFO     | .. there are 9 such processes running
[2025-10-25 01:25:21] 2025-10-24 23:24:50,359 | INFO     | found 0 job(s) in 20 queues
[2025-10-25 01:25:21] 2025-10-24 23:24:50,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-25 01:25:21] 2025-10-24 23:24:50,359 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-25 01:25:21] 2025-10-24 23:25:10,877 | INFO     | [monitor] cgroup control has ended
[2025-10-25 01:25:21] 2025-10-24 23:25:12,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140237847680832)>', '<ExcThread(monitor, started 140237544068864)>']
[2025-10-25 01:25:21] 2025-10-24 23:25:12,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-25 01:25:21] 2025-10-24 23:25:12,488 | INFO     | [monitor] control thread has ended
[2025-10-25 01:25:21] 2025-10-24 23:25:17,035 | INFO     | all workflow threads have been joined
[2025-10-25 01:25:21] 2025-10-24 23:25:17,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-25 01:25:21] 2025-10-24 23:25:17,035 | INFO     | traces error code: 0
[2025-10-25 01:25:21] 2025-10-24 23:25:17,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-25 01:25:21] 2025-10-24 23:25:17,351 [wrapper] ==== pilot stdout END ====
[2025-10-25 01:25:21] 2025-10-24 23:25:17,389 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-25 01:25:21] 2025-10-24 23:25:17,426 [wrapper] pilotpid: 21802
[2025-10-25 01:25:21] 2025-10-24 23:25:17,468 [wrapper] Pilot exit status: 0
[2025-10-25 01:25:21] 2025-10-24 23:25:17,924 [wrapper] pandaids: 6855324445
[2025-10-25 01:25:21] 2025-10-24 23:25:18,909 [wrapper] cleanup supervisor_pilot 10227 21803
[2025-10-25 01:25:21] 2025-10-24 23:25:18,996 [wrapper] Test setup, not cleaning
[2025-10-25 01:25:21] 2025-10-24 23:25:19,077 [wrapper] apfmon messages muted
[2025-10-25 01:25:21] 2025-10-24 23:25:19,136 [wrapper] ==== wrapper stdout END ====
[2025-10-25 01:25:21] 2025-10-24 23:25:19,196 [wrapper] ==== wrapper stderr END ====
[2025-10-25 01:25:21]  *** Error codes and diagnostics ***
[2025-10-25 01:25:21]     "exeErrorCode": 0,
[2025-10-25 01:25:21]     "exeErrorDiag": "",
[2025-10-25 01:25:21]     "pilotErrorCode": 0,
[2025-10-25 01:25:21]     "pilotErrorDiag": "",
[2025-10-25 01:25:21]  *** Listing of results directory ***
[2025-10-25 01:25:21] total 437108
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc    557409 Oct 24 03:29 pilot3.tar.gz
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc      5112 Oct 24 03:36 queuedata.json
[2025-10-25 01:25:21] -rwx------. 1 boinc boinc     36292 Oct 24 03:38 runpilot2-wrapper.sh
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc       100 Oct 24 20:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-25 01:25:21] -rwxr-xr-x. 1 boinc boinc      7986 Oct 24 20:34 run_atlas
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc       105 Oct 24 20:34 job.xml
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc      6391 Oct 24 20:34 init_data.xml
[2025-10-25 01:25:21] -rw-r--r--. 2 boinc boinc 226866478 Oct 24 20:34 EVNT.46771634._004607.pool.root.1
[2025-10-25 01:25:21] -rw-r--r--. 2 boinc boinc     15120 Oct 24 20:34 start_atlas.sh
[2025-10-25 01:25:21] drwxrwx--x. 2 boinc boinc        68 Oct 24 20:34 shared
[2025-10-25 01:25:21] -rw-r--r--. 2 boinc boinc    569684 Oct 24 20:34 input.tar.gz
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc         0 Oct 24 20:34 boinc_lockfile
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc      2562 Oct 24 20:34 pandaJob.out
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc    978605 Oct 24 20:38 agis_schedconf.cvmfs.json
[2025-10-25 01:25:21] drwx------. 5 boinc boinc      4096 Oct 24 20:38 pilot3
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc 211288573 Oct 25 01:21 HITS.46771637._115486.pool.root.1
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc       531 Oct 25 01:21 boinc_task_state.xml
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc      1018 Oct 25 01:22 memory_monitor_summary.json
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc   1560772 Oct 25 01:22 agis_ddmendpoints.agis.ALL.json
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc    490011 Oct 25 01:22 log.46771637._115486.job.log.tgz.1
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc      7780 Oct 25 01:24 heartbeat.json
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc        95 Oct 25 01:24 pilot_heartbeat.json
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc      8192 Oct 25 01:25 boinc_mmap_file
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc        28 Oct 25 01:25 wrapper_checkpoint.txt
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc      4884 Oct 25 01:25 pilotlog.txt
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc   2284973 Oct 25 01:25 log.46771637._115486.job.log.1
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc       357 Oct 25 01:25 output.list
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc       620 Oct 25 01:25 runtime_log
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc   2795520 Oct 25 01:25 result.tar.gz
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc       656 Oct 25 01:25 zYDLDmPwLW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhSAODm8ARj9m.diag
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc      8703 Oct 25 01:25 runtime_log.err
[2025-10-25 01:25:21] -rw-r--r--. 1 boinc boinc     20816 Oct 25 01:25 stderr.txt
[2025-10-25 01:25:21] HITS file was successfully produced:
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc 211288573 Oct 25 01:21 shared/HITS.pool.root.1
[2025-10-25 01:25:21]  *** Contents of shared directory: ***
[2025-10-25 01:25:21] total 431200
[2025-10-25 01:25:21] -rw-r--r--. 2 boinc boinc 226866478 Oct 24 20:34 ATLAS.root_0
[2025-10-25 01:25:21] -rw-r--r--. 2 boinc boinc     15120 Oct 24 20:34 start_atlas.sh
[2025-10-25 01:25:21] -rw-r--r--. 2 boinc boinc    569684 Oct 24 20:34 input.tar.gz
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc 211288573 Oct 25 01:21 HITS.pool.root.1
[2025-10-25 01:25:21] -rw-------. 1 boinc boinc   2795520 Oct 25 01:25 result.tar.gz
01:25:22 (17996): run_atlas exited; CPU time 63220.521742
01:25:22 (17996): called boinc_finish(0)

</stderr_txt>
]]>

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