Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-24 04:17:05 (17988): vboxwrapper version 26210
2025-10-24 04:17:05 (17988): BOINC client version: 8.0.2
2025-10-24 04:17:08 (17988): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-10-24 04:17:08 (17988): Successfully copied 'init_data.xml' to the shared directory.
2025-10-24 04:17:08 (17988): Create VM. (boinc_eb8c8b305720ca18, slot#0)
2025-10-24 04:17:09 (17988): Setting Memory Size for VM. (4100MB)
2025-10-24 04:17:10 (17988): Setting CPU Count for VM. (1)
2025-10-24 04:17:10 (17988): Setting Chipset Options for VM.
2025-10-24 04:17:10 (17988): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-24 04:17:11 (17988): Setting Boot Options for VM.
2025-10-24 04:17:12 (17988): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-24 04:17:12 (17988): Enabling VM Network Access.
2025-10-24 04:17:12 (17988): Disabling USB Support for VM.
2025-10-24 04:17:13 (17988): Disabling COM Port Support for VM.
2025-10-24 04:17:13 (17988): Disabling LPT Port Support for VM.
2025-10-24 04:17:14 (17988): Disabling Audio Support for VM.
2025-10-24 04:17:14 (17988): Disabling Clipboard Support for VM.
2025-10-24 04:17:14 (17988): Disabling Drag and Drop Support for VM.
2025-10-24 04:17:15 (17988): Adding storage controller(s) to VM.
2025-10-24 04:17:16 (17988): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-24 04:17:18 (17988): Adding VirtualBox Guest Additions to VM.
2025-10-24 04:17:19 (17988): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-24 04:17:20 (17988): forwarding host port 60975 to guest port 80
2025-10-24 04:17:20 (17988): Enabling remote desktop for VM.
2025-10-24 04:17:20 (17988): Required extension pack not installed, remote desktop not enabled.
2025-10-24 04:17:20 (17988): Enabling shared directory for VM.
2025-10-24 04:17:21 (17988): Starting VM using VBoxManage interface. (boinc_eb8c8b305720ca18, slot#0)
2025-10-24 04:17:28 (17988): Successfully started VM. (PID = '16044')
2025-10-24 04:17:28 (17988): Reporting VM Process ID to BOINC.
2025-10-24 04:17:28 (17988): Guest Log: BIOS: VirtualBox 6.1.12
2025-10-24 04:17:28 (17988): Guest Log: CPUID EDX: 0x178bfbff
2025-10-24 04:17:28 (17988): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-24 04:17:28 (17988): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-24 04:17:28 (17988): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-24 04:17:28 (17988): Detected: Web Application Enabled (http://localhost:60975)
2025-10-24 04:17:28 (17988): Preference change detected
2025-10-24 04:17:28 (17988): Setting CPU throttle for VM. (100%)
2025-10-24 04:17:29 (17988): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-24 04:17:30 (17988): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-24 04:17:30 (17988): Guest Log: BIOS: Booting from Hard Disk...
2025-10-24 04:17:59 (17988): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-24 04:17:59 (17988): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-24 04:17:59 (17988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-24 04:18:14 (17988): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-24 04:18:14 (17988): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-24 04:18:52 (17988): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-24 04:18:52 (17988): Guest Log: 00:00:00.002293 main     Log opened 2025-10-24T04:18:50.908865000Z
2025-10-24 04:18:52 (17988): Guest Log: 00:00:00.003049 main     OS Product: Linux
2025-10-24 04:18:52 (17988): Guest Log: 00:00:00.003227 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-24 04:18:52 (17988): Guest Log: 00:00:00.003334 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-24 04:18:52 (17988): Guest Log: 00:00:00.003457 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-24 04:18:52 (17988): Guest Log: 00:00:00.003459 main     Process ID: 1231
2025-10-24 04:18:52 (17988): Guest Log: 00:00:00.003460 main     Package type: LINUX_64BITS_GENERIC
2025-10-24 04:18:52 (17988): Guest Log: 00:00:00.005283 main     5.2.32 r132073 started. Verbose level = 0
2025-10-24 04:18:54 (17988): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-24 04:18:54 (17988): Guest Log: [INFO] Mounting shared directory
2025-10-24 04:18:55 (17988): Guest Log: [INFO] Checking for init_data.xml
2025-10-24 04:19:02 (17988): Guest Log: 00:00:10.079106 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 764 766 000ns (GuestNow=1 761 293 942 750 162 000 ns GuestLast=1 761 279 530 985 396 000 ns fSetTimeLastLoop=true )
2025-10-24 04:19:16 (17988): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-24 04:19:16 (17988): Guest Log: [INFO] Detected branch: prod
2025-10-24 04:19:17 (17988): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-24 04:19:17 (17988): Guest Log: Copying input files
2025-10-24 04:19:20 (17988): Guest Log: Copied input files into RunAtlas.
2025-10-24 04:19:20 (17988): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-24 04:19:20 (17988): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-24 04:19:20 (17988): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-24 04:19:20 (17988): Guest Log: Further information can be found at the LHC@home message board.
2025-10-24 04:19:42 (17988): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-24 04:19:44 (17988): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-24 04:19:44 (17988): Guest Log: 2.6.3.0 1527 0 32088 152067 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-24 04:19:52 (17988): Guest Log: copied the webapp to /var/www
2025-10-24 04:19:52 (17988): Guest Log: core_number=1
2025-10-24 04:19:53 (17988): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-24 04:19:53 (17988): Guest Log:  *** Starting ATLAS job. (PandaID=6855324482 taskID=46771637) ***
2025-10-24 04:35:20 (17988): Guest Log:  *** Job finished ***
2025-10-24 04:35:20 (17988): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:08,636 | INFO     | all workflow threads have been joined
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:08,637 | INFO     | end of generic workflow (traces error code: 0)
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:08,641 | INFO     | traces error code: 0
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:08,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:18,353 | INFO     | PID=5891 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:18,356 | INFO     | found 0 job(s) in 20 queues
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:18,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:18,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:18,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:18,357 | INFO     | [monitor] control thread has ended
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:18,761 [wrapper] ==== pilot stdout END ====
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:18,791 [wrapper] ==== wrapper stdout RESUME ====
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:18,820 [wrapper] pilotpid: 5891
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:18,847 [wrapper] Pilot exit status: 0
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:19,015 [wrapper] pandaids: 6855324482
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:19,142 [wrapper] cleanup supervisor_pilot  5897 5892
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:19,177 [wrapper] Test setup, not cleaning
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:19,205 [wrapper] apfmon messages muted
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:19,233 [wrapper] ==== wrapper stdout END ====
2025-10-24 04:35:21 (17988): Guest Log: 2025-10-24 08:35:19,264 [wrapper] ==== wrapper stderr END ====
2025-10-24 04:35:21 (17988): Guest Log:  *** Error codes and diagnostics ***
2025-10-24 04:35:21 (17988): Guest Log:     "exeErrorCode": 65,
2025-10-24 04:35:21 (17988): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-24 04:35:21 (17988): Guest Log:     "pilotErrorCode": 1305,
2025-10-24 04:35:21 (17988): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-10-24 04:35:21 (17988): Guest Log:  *** Listing of results directory ***
2025-10-24 04:35:21 (17988): Guest Log: total 4164
2025-10-24 04:35:21 (17988): Guest Log: -rw-r--r--. 1 atlas atlas  557409 Oct 24 01:29 pilot3.tar.gz
2025-10-24 04:35:21 (17988): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct 24 01:43 queuedata.json
2025-10-24 04:35:21 (17988): Guest Log: -rwx------. 1 atlas atlas   36292 Oct 24 01:43 runpilot2-wrapper.sh
2025-10-24 04:35:21 (17988): Guest Log: -rwxr-xr-x. 1 atlas atlas    6063 Oct 24 08:19 init_data.xml
2025-10-24 04:35:21 (17988): Guest Log: -rwxr-xr-x. 1 atlas atlas  569690 Oct 24 08:19 input.tar.gz
2025-10-24 04:35:21 (17988): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Oct 24 08:19 start_atlas.sh
2025-10-24 04:35:21 (17988): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 24 08:19 EVNT.46771634._004608.pool.root.1 -> /data/./ATLAS.root_0
2025-10-24 04:35:21 (17988): Guest Log: -rw-r--r--. 1 atlas atlas    2562 Oct 24 08:19 pandaJob.out
2025-10-24 04:35:21 (17988): Guest Log: -rw-------. 1 atlas atlas  978570 Oct 24 08:21 agis_schedconf.cvmfs.json
2025-10-24 04:35:21 (17988): Guest Log: -rw-------. 1 atlas atlas 1560740 Oct 24 08:21 agis_ddmendpoints.agis.ALL.json
2025-10-24 04:35:21 (17988): Guest Log: drwx------. 5 atlas atlas    4096 Oct 24 08:22 pilot3
2025-10-24 04:35:21 (17988): Guest Log: -rw-------. 1 atlas atlas   50472 Oct 24 08:32 log.46771637._115523.job.log.tgz.1
2025-10-24 04:35:21 (17988): Guest Log: -rw-------. 1 atlas atlas    8213 Oct 24 08:34 heartbeat.json
2025-10-24 04:35:21 (17988): Guest Log: -rw-------. 1 atlas atlas      95 Oct 24 08:35 pilot_heartbeat.json
2025-10-24 04:35:21 (17988): Guest Log: -rw-------. 1 atlas atlas     744 Oct 24 08:35 pilotlog.txt
2025-10-24 04:35:21 (17988): Guest Log: -rw-------. 1 atlas atlas  168109 Oct 24 08:35 log.46771637._115523.job.log.1
2025-10-24 04:35:21 (17988): Guest Log: -rw-------. 1 atlas atlas     188 Oct 24 08:35 output.list
2025-10-24 04:35:21 (17988): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct 24 08:35 runtime_log
2025-10-24 04:35:21 (17988): Guest Log: -rw-------. 1 atlas atlas  235520 Oct 24 08:35 result.tar.gz
2025-10-24 04:35:21 (17988): Guest Log: -rw-r--r--. 1 atlas atlas    8380 Oct 24 08:35 runtime_log.err
2025-10-24 04:35:21 (17988): Guest Log: -rw-------. 1 atlas atlas     650 Oct 24 08:35 mfqNDmO1LW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmaRkMDmECJXmn.diag
2025-10-24 04:35:21 (17988): Guest Log: Looking for outputfile HITS.46771637._115523.pool.root.1
2025-10-24 04:35:21 (17988): Guest Log: No HITS file was produced
2025-10-24 04:35:21 (17988): Guest Log: Successfully finished the ATLAS job!
2025-10-24 04:35:21 (17988): Guest Log: Copying the results back to the shared directory!
2025-10-24 04:35:21 (17988): Guest Log:  *** Contents of shared directory: ***
2025-10-24 04:35:22 (17988): Guest Log: total 224148
2025-10-24 04:35:22 (17988): Guest Log: -rwxrwxrwx. 1 root root 228690692 Oct 24 08:17 ATLAS.root_0
2025-10-24 04:35:22 (17988): Guest Log: -rwxrwxrwx. 1 root root      6063 Oct 24 08:17 init_data.xml
2025-10-24 04:35:22 (17988): Guest Log: -rwxrwxrwx. 1 root root    569690 Oct 24 07:20 input.tar.gz
2025-10-24 04:35:22 (17988): Guest Log: -rwxrwxrwx. 1 root root    235520 Oct 24 08:35 result.tar.gz
2025-10-24 04:35:22 (17988): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 24 07:20 start_atlas.sh
2025-10-24 04:35:22 (17988): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-24 04:35:22 (17988): VM Completion File Detected.
2025-10-24 04:35:22 (17988): Powering off VM.
2025-10-24 04:35:24 (17988): Successfully stopped VM.
2025-10-24 04:35:24 (17988): Deregistering VM. (boinc_eb8c8b305720ca18, slot#0)
2025-10-24 04:35:24 (17988): Removing network bandwidth throttle group from VM.
2025-10-24 04:35:24 (17988): Removing VM from VirtualBox.
2025-10-24 04:35:29 (17988): called boinc_finish(0)

</stderr_txt>
]]>

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