Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:01:13 (716583): wrapper (7.7.26015): starting
18:01:13 (716583): wrapper: running run_atlas (--nthreads 4)
[2025-10-24 18:01:13] Arguments: --nthreads 4
[2025-10-24 18:01:13] Threads: 4
[2025-10-24 18:01:13] Checking for CVMFS
[2025-10-24 18:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 18:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 18:01:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 18:01:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 18:01:14] 2.9.2.0 3124 2217 91260 152087 1 57 30644185 36864001 0 130560 0 1837300 99.989 91888 1025 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-24 18:01:14] CVMFS is ok
[2025-10-24 18:01:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 18:01:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 18:01:14] Further information can be found at the LHC@home message board.
[2025-10-24 18:01:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 18:01:14] Checking for apptainer binary...
[2025-10-24 18:01:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 18:01:14] Running /usr/bin/apptainer --version
[2025-10-24 18:01:14] apptainer version 1.4.1-1.1
[2025-10-24 18:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 18:01:14] belleA267b
[2025-10-24 18:01:14] apptainer works
[2025-10-24 18:01:14] Set ATHENA_PROC_NUMBER=4
[2025-10-24 18:01:14] Set ATHENA_CORE_NUMBER=4
[2025-10-24 18:01:14] Starting ATLAS job with PandaID=6855283938
[2025-10-24 18:01:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 19:17:34]  *** The last 200 lines of the pilot log: ***
[2025-10-24 19:17:34]  replicas=None
[2025-10-24 19:17:34]  scope=mc23_13p6TeV
[2025-10-24 19:17:34]  status=None
[2025-10-24 19:17:34]  status_code=0
[2025-10-24 19:17:34]  storage_token=
[2025-10-24 19:17:34]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6855283938/log.46771637._114802.job.log.tgz.1
[2025-10-24 19:17:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/1c/log.46771637._114802.job.log.tgz.1
[2025-10-24 19:17:34]  workdir=None
[2025-10-24 19:17:34] ]
[2025-10-24 19:17:34] 2025-10-24 17:16:52,313 | INFO     | transferring file log.46771637._114802.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6855283938/log.46771637._114802.job.log.tgz.1 to /local/data/boinc/
[2025-10-24 19:17:34] 2025-10-24 17:16:52,313 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6855283938/log.46771637._114802.job.log.tgz.1 /local/data/boinc/slots/0/log.46771637._1148
[2025-10-24 19:17:34] 2025-10-24 17:16:52,331 | INFO     | adding to output.list: log.46771637._114802.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/1c/log.46771637._114802.job.log.tg
[2025-10-24 19:17:34] 2025-10-24 17:16:52,332 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-24 19:17:34] 2025-10-24 17:16:52,332 | INFO     | summary of transferred files:
[2025-10-24 19:17:34] 2025-10-24 17:16:52,332 | INFO     |  -- lfn=log.46771637._114802.job.log.tgz.1, status_code=0, status=transferred
[2025-10-24 19:17:34] 2025-10-24 17:16:52,332 | INFO     | stage-out finished correctly
[2025-10-24 19:17:34] 2025-10-24 17:16:54,206 | INFO     | time since job start (4532s) is within the limit (172800.0s)
[2025-10-24 19:17:34] 2025-10-24 17:16:54,259 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-24 19:17:34] 2025-10-24 17:16:54,466 | INFO     | job 6855283938 has state=finished
[2025-10-24 19:17:34] 2025-10-24 17:16:54,466 | INFO     | preparing for final server update for job 6855283938 in state='finished'
[2025-10-24 19:17:34] 2025-10-24 17:16:54,466 | INFO     | this job has now completed (state=finished)
[2025-10-24 19:17:34] 2025-10-24 17:16:54,466 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-24 19:17:34] 2025-10-24 17:16:54,466 | INFO     | log transfer has been attempted: DONE
[2025-10-24 19:17:34] 2025-10-24 17:16:54,467 | INFO     | job 6855283938 has finished - writing final server update
[2025-10-24 19:17:34] 2025-10-24 17:16:54,467 | INFO     | total number of processed events: 400 (read)
[2025-10-24 19:17:34] 2025-10-24 17:16:54,468 | INFO     | executing command: lscpu
[2025-10-24 19:17:34] 2025-10-24 17:16:54,488 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-24 19:17:34] 2025-10-24 17:16:55,931 | WARNING  | process 726946 can no longer be monitored (due to stat problems) - aborting
[2025-10-24 19:17:34] 2025-10-24 17:16:55,931 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6855283938/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 19:17:34] 2025-10-24 17:16:55,988 | INFO     | number of running child processes to parent process 726946: 1
[2025-10-24 19:17:34] 2025-10-24 17:16:55,988 | INFO     | maximum number of monitored processes: 6
[2025-10-24 19:17:34] 2025-10-24 17:16:56,211 | INFO     | time since job start (4534s) is within the limit (172800.0s)
[2025-10-24 19:17:34] 2025-10-24 17:16:57,291 | INFO     | PID=720375 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-24 19:17:34] 2025-10-24 17:16:58,291 | INFO     | time since job start (4536s) is within the limit (172800.0s)
[2025-10-24 19:17:34] 2025-10-24 17:16:58,491 | INFO     | monitor loop #349: job 0:6855283938 is in state 'finished'
[2025-10-24 19:17:34] 2025-10-24 17:16:58,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 19:17:34] 2025-10-24 17:16:59,946 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 19:17:34] 2025-10-24 17:16:59,948 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3606.5436250000002
[2025-10-24 19:17:34] 2025-10-24 17:16:59,949 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6855283938/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 19:17:34] 2025-10-24 17:16:59,949 | INFO     | extracted standard info from prmon json
[2025-10-24 19:17:34] 2025-10-24 17:16:59,949 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 19:17:34] 2025-10-24 17:16:59,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 19:17:34] 2025-10-24 17:16:59,950 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 19:17:34] 2025-10-24 17:16:59,950 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 19:17:34] 2025-10-24 17:16:59,950 | INFO     | fitting pss+swap vs Time
[2025-10-24 19:17:34] 2025-10-24 17:16:59,950 | INFO     | sum of square deviations: 93240818.0
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | sum of deviations: 1031874291.9999999
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | mean x: 1761324023.0
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | mean y: 2415945.7462686566
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | -- intersect: -19489744442.80498
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | intersect: -19489744442.80498
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | chi2: 0.024137563528404946
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | -- intersect: -19489744442.80498
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | current memory leak: 11.07 B/s (using 67 data points, chi2=0.02)
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | could have reported an average CPU frequency of 3857 MHz (6 samples)
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | ..............................
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | . Timing measurements:
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | . get job = 0 s
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | . initial setup = 1 s
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | . payload setup = 4 s
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | . stage-in = 0 s
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | . payload execution = 4507 s
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | . stage-out = 0 s
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | . log creation = 0 s
[2025-10-24 19:17:34] 2025-10-24 17:16:59,951 | INFO     | ..............................
[2025-10-24 19:17:34] 2025-10-24 17:16:59,991 | INFO     | 
[2025-10-24 19:17:34] 2025-10-24 17:16:59,991 | INFO     | job summary report
[2025-10-24 19:17:34] 2025-10-24 17:16:59,991 | INFO     | --------------------------------------------------
[2025-10-24 19:17:34] 2025-10-24 17:16:59,991 | INFO     | PanDA job id: 6855283938
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | task id: 46771637
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | errors: (none)
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | pilot state: finished 
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | transexitcode: 0
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | exeerrorcode: 0
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | exeerrordiag: 
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | exitcode: 0
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | exitmsg: OK
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | cpuconsumptiontime: 16984 s
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | nevents: 400
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | neventsw: 0
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | pid: 726946
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | pgrp: 726946
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | corecount: 4
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | event service: False
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | sizes: {0: 2348938, 4: 2349200, 11: 2349228, 4516: 2384509, 4518: 2384509, 4524: 2384703}
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | --------------------------------------------------
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | 
[2025-10-24 19:17:34] 2025-10-24 17:16:59,992 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 19:17:34] 2025-10-24 17:17:00,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 19:17:34] 2025-10-24 17:17:00,012 | INFO     | job 6855283938 has completed (purged errors)
[2025-10-24 19:17:34] 2025-10-24 17:17:00,012 | INFO     | overall cleanup function is called
[2025-10-24 19:17:34] 2025-10-24 17:17:01,019 | INFO     | --- collectZombieJob: --- 10, [726946]
[2025-10-24 19:17:34] 2025-10-24 17:17:01,019 | INFO     | zombie collector waiting for pid 726946
[2025-10-24 19:17:34] 2025-10-24 17:17:01,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 19:17:34] 2025-10-24 17:17:01,019 | INFO     | collected zombie processes
[2025-10-24 19:17:34] 2025-10-24 17:17:01,019 | INFO     | will attempt to kill all subprocesses of pid=726946
[2025-10-24 19:17:34] 2025-10-24 17:17:01,063 | INFO     | process IDs to be killed: [726946] (in reverse order)
[2025-10-24 19:17:34] 2025-10-24 17:17:01,095 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 19:17:34] 2025-10-24 17:17:01,096 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 19:17:34] 2025-10-24 17:17:01,097 | INFO     | did not find any defunct processes belonging to 726946
[2025-10-24 19:17:34] 2025-10-24 17:17:01,099 | INFO     | did not find any defunct processes belonging to 726946
[2025-10-24 19:17:34] 2025-10-24 17:17:01,099 | INFO     | ready for new job
[2025-10-24 19:17:34] 2025-10-24 17:17:01,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 19:17:34] 2025-10-24 17:17:01,099 | INFO     | ***************************************
[2025-10-24 19:17:34] 2025-10-24 17:17:01,100 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 19:17:34] 2025-10-24 17:17:01,100 | INFO     | ***************************************
[2025-10-24 19:17:34] 2025-10-24 17:17:01,100 | INFO     | 
[2025-10-24 19:17:34] 2025-10-24 17:17:01,100 | INFO     | architecture information:
[2025-10-24 19:17:34] 2025-10-24 17:17:01,100 | INFO     | executing command: cat /etc/os-release
[2025-10-24 19:17:34] 2025-10-24 17:17:01,114 | INFO     | cat /etc/os-release:
[2025-10-24 19:17:34] NAME="CentOS Linux"
[2025-10-24 19:17:34] VERSION="7 (Core)"
[2025-10-24 19:17:34] ID="centos"
[2025-10-24 19:17:34] ID_LIKE="rhel fedora"
[2025-10-24 19:17:34] VERSION_ID="7"
[2025-10-24 19:17:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 19:17:34] ANSI_COLOR="0;31"
[2025-10-24 19:17:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 19:17:34] HOME_URL="https://www.centos.org/"
[2025-10-24 19:17:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 19:17:34] 
[2025-10-24 19:17:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 19:17:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 19:17:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 19:17:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 19:17:34] 
[2025-10-24 19:17:34] 2025-10-24 17:17:01,114 | INFO     | ***************************************
[2025-10-24 19:17:34] 2025-10-24 17:17:01,617 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-24 19:17:34] 2025-10-24 17:17:01,634 | INFO     | sufficient remaining disk space (328748498944 B)
[2025-10-24 19:17:34] 2025-10-24 17:17:01,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 19:17:34] 2025-10-24 17:17:01,634 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 19:17:34] 2025-10-24 17:17:01,634 | INFO     | update_server=False
[2025-10-24 19:17:34] 2025-10-24 17:17:01,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 19:17:34] 2025-10-24 17:17:01,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 19:17:34] 2025-10-24 17:17:02,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 19:17:34] 2025-10-24 17:17:02,001 | INFO     | aborting loop
[2025-10-24 19:17:34] 2025-10-24 17:17:02,032 | INFO     | all job control threads have been joined
[2025-10-24 19:17:34] 2025-10-24 17:17:02,640 | INFO     | [job] queue monitor thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:02,640 | INFO     | [job] retrieve thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:02,732 | INFO     | all data control threads have been joined
[2025-10-24 19:17:34] 2025-10-24 17:17:02,740 | INFO     | all payload control threads have been joined
[2025-10-24 19:17:34] 2025-10-24 17:17:02,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 19:17:34] 2025-10-24 17:17:02,958 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:03,006 | INFO     | [job] job monitor thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:03,038 | INFO     | [job] control thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:03,106 | INFO     | [job] validate thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:03,183 | INFO     | [payload] failed_post thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:03,454 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:03,466 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:03,738 | INFO     | [data] control thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:03,745 | INFO     | [payload] control thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:03,961 | INFO     | [data] copytool_in thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:04,200 | INFO     | [payload] validate_post thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:04,811 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 19:17:34] 2025-10-24 17:17:04,894 | INFO     | [data] copytool_out thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:08,818 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:11,860 | INFO     | job.realtimelogging is not enabled
[2025-10-24 19:17:34] 2025-10-24 17:17:12,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 19:17:34] 2025-10-24 17:17:28,339 | INFO     | [monitor] cgroup control has ended
[2025-10-24 19:17:34] 2025-10-24 17:17:29,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945946306368)>', '<ExcThread(monitor, started 139944706164480)>']
[2025-10-24 19:17:34] 2025-10-24 17:17:31,418 | INFO     | PID=720375 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-24 19:17:34] 2025-10-24 17:17:31,418 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 19:17:34] 2025-10-24 17:17:31,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 19:17:34] 2025-10-24 17:17:31,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 19:17:34] 2025-10-24 17:17:31,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 19:17:34] 2025-10-24 17:17:31,418 | INFO     | [monitor] control thread has ended
[2025-10-24 19:17:34] 2025-10-24 17:17:34,392 | INFO     | all workflow threads have been joined
[2025-10-24 19:17:34] 2025-10-24 17:17:34,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 19:17:34] 2025-10-24 17:17:34,392 | INFO     | traces error code: 0
[2025-10-24 19:17:34] 2025-10-24 17:17:34,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 19:17:34] 2025-10-24 17:17:34,471 [wrapper] ==== pilot stdout END ====
[2025-10-24 19:17:34] 2025-10-24 17:17:34,475 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 19:17:34] 2025-10-24 17:17:34,479 [wrapper] pilotpid: 720375
[2025-10-24 19:17:34] 2025-10-24 17:17:34,483 [wrapper] Pilot exit status: 0
[2025-10-24 19:17:34] 2025-10-24 17:17:34,495 [wrapper] pandaids: 6855283938
[2025-10-24 19:17:34] 2025-10-24 17:17:34,517 [wrapper] cleanup supervisor_pilot  739191 720376
[2025-10-24 19:17:34] 2025-10-24 17:17:34,521 [wrapper] Test setup, not cleaning
[2025-10-24 19:17:34] 2025-10-24 17:17:34,525 [wrapper] apfmon messages muted
[2025-10-24 19:17:34] 2025-10-24 17:17:34,530 [wrapper] ==== wrapper stdout END ====
[2025-10-24 19:17:34] 2025-10-24 17:17:34,534 [wrapper] ==== wrapper stderr END ====
[2025-10-24 19:17:34]  *** Error codes and diagnostics ***
[2025-10-24 19:17:34]     "exeErrorCode": 0,
[2025-10-24 19:17:34]     "exeErrorDiag": "",
[2025-10-24 19:17:34]     "pilotErrorCode": 0,
[2025-10-24 19:17:34]     "pilotErrorDiag": "",
[2025-10-24 19:17:34]  *** Listing of results directory ***
[2025-10-24 19:17:34] total 430908
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc    557409 Oct 24 02:25 pilot3.tar.gz
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc      5112 Oct 24 02:46 queuedata.json
[2025-10-24 19:17:34] -rwx------ 1 boinc boinc     36292 Oct 24 02:49 runpilot2-wrapper.sh
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc       100 Oct 24 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 19:17:34] -rwxr-xr-x 1 boinc boinc      7986 Oct 24 18:01 run_atlas
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc       105 Oct 24 18:01 job.xml
[2025-10-24 19:17:34] -rw-r--r-- 2 boinc boinc 228124094 Oct 24 18:01 EVNT.46771634._004582.pool.root.1
[2025-10-24 19:17:34] -rw-r--r-- 2 boinc boinc    569691 Oct 24 18:01 input.tar.gz
[2025-10-24 19:17:34] -rw-r--r-- 2 boinc boinc     15120 Oct 24 18:01 start_atlas.sh
[2025-10-24 19:17:34] drwxrwx--x 2 boinc boinc      4096 Oct 24 18:01 shared
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc         0 Oct 24 18:01 boinc_setup_complete
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc      6378 Oct 24 18:01 init_data.xml
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc         0 Oct 24 18:01 boinc_lockfile
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc      2562 Oct 24 18:01 pandaJob.out
[2025-10-24 19:17:34] -rw------- 1 boinc boinc    978655 Oct 24 18:01 agis_schedconf.cvmfs.json
[2025-10-24 19:17:34] -rw------- 1 boinc boinc   1560772 Oct 24 18:01 agis_ddmendpoints.agis.ALL.json
[2025-10-24 19:17:34] drwx------ 5 boinc boinc      4096 Oct 24 18:01 pilot3
[2025-10-24 19:17:34] -rw------- 1 boinc boinc 207376017 Oct 24 19:16 HITS.46771637._114802.pool.root.1
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc       529 Oct 24 19:16 boinc_task_state.xml
[2025-10-24 19:17:34] -rw------- 1 boinc boinc        95 Oct 24 19:16 pilot_heartbeat.json
[2025-10-24 19:17:34] -rw------- 1 boinc boinc      1025 Oct 24 19:16 memory_monitor_summary.json
[2025-10-24 19:17:34] -rw------- 1 boinc boinc    253206 Oct 24 19:16 log.46771637._114802.job.log.tgz.1
[2025-10-24 19:17:34] -rw------- 1 boinc boinc      7771 Oct 24 19:16 heartbeat.json
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc        27 Oct 24 19:17 wrapper_checkpoint.txt
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc      8192 Oct 24 19:17 boinc_mmap_file
[2025-10-24 19:17:34] -rw------- 1 boinc boinc      4823 Oct 24 19:17 pilotlog.txt
[2025-10-24 19:17:34] -rw------- 1 boinc boinc    669742 Oct 24 19:17 log.46771637._114802.job.log.1
[2025-10-24 19:17:34] -rw------- 1 boinc boinc       357 Oct 24 19:17 output.list
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc       620 Oct 24 19:17 runtime_log
[2025-10-24 19:17:34] -rw------- 1 boinc boinc    942080 Oct 24 19:17 result.tar.gz
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc      8797 Oct 24 19:17 runtime_log.err
[2025-10-24 19:17:34] -rw------- 1 boinc boinc       662 Oct 24 19:17 AdLLDmZALW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPKAODmh0uXOo.diag
[2025-10-24 19:17:34] -rw-r--r-- 1 boinc boinc     21914 Oct 24 19:17 stderr.txt
[2025-10-24 19:17:34] HITS file was successfully produced:
[2025-10-24 19:17:34] -rw------- 1 boinc boinc 207376017 Oct 24 19:16 shared/HITS.pool.root.1
[2025-10-24 19:17:34]  *** Contents of shared directory: ***
[2025-10-24 19:17:34] total 426800
[2025-10-24 19:17:34] -rw-r--r-- 2 boinc boinc 228124094 Oct 24 18:01 ATLAS.root_0
[2025-10-24 19:17:34] -rw-r--r-- 2 boinc boinc    569691 Oct 24 18:01 input.tar.gz
[2025-10-24 19:17:34] -rw-r--r-- 2 boinc boinc     15120 Oct 24 18:01 start_atlas.sh
[2025-10-24 19:17:34] -rw------- 1 boinc boinc 207376017 Oct 24 19:16 HITS.pool.root.1
[2025-10-24 19:17:34] -rw------- 1 boinc boinc    942080 Oct 24 19:17 result.tar.gz
19:17:36 (716583): run_atlas exited; CPU time 16996.125424
19:17:36 (716583): called boinc_finish(0)

</stderr_txt>
]]>

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