Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
11:47:00 (715632): wrapper (7.7.26015): starting
11:47:00 (715632): wrapper: running run_atlas (--nthreads 12)
[2025-10-24 11:47:00] Arguments: --nthreads 12
[2025-10-24 11:47:00] Threads: 12
[2025-10-24 11:47:00] Checking for CVMFS
[2025-10-24 11:47:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 11:47:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 11:47:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 11:47:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 11:47:00] 2.11.0.0 76391 278 59908 152077 2 178 4462780 6144001 11052 130560 0 1023125 99.995 18557 479 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-24 11:47:00] CVMFS is ok
[2025-10-24 11:47:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 11:47:01] Checking for apptainer binary...
[2025-10-24 11:47:01] apptainer is not installed, using version from CVMFS
[2025-10-24 11:47:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 11:47:01] radiat0r
[2025-10-24 11:47:01] apptainer works
[2025-10-24 11:47:01] Set ATHENA_PROC_NUMBER=12
[2025-10-24 11:47:01] Set ATHENA_CORE_NUMBER=12
[2025-10-24 11:47:01] Starting ATLAS job with PandaID=6855074747
[2025-10-24 11:47:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 12:44:26]  *** The last 200 lines of the pilot log: ***
[2025-10-24 12:44:26]  storage_token=
[2025-10-24 12:44:26]  surl=/var/lib/boinc/slots/13/PanDA_Pilot-6855074747/log.46771637._111844.job.log.tgz.1
[2025-10-24 12:44:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/0f/log.46771637._111844.job.log.tgz.1
[2025-10-24 12:44:26]  workdir=None
[2025-10-24 12:44:26] ]
[2025-10-24 12:44:26] 2025-10-24 12:43:42,542 | INFO     | transferring file log.46771637._111844.job.log.tgz.1 from /var/lib/boinc/slots/13/PanDA_Pilot-6855074747/log.46771637._111844.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-24 12:44:26] 2025-10-24 12:43:42,542 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/13/PanDA_Pilot-6855074747/log.46771637._111844.job.log.tgz.1 /var/lib/boinc/slots/13/log.46771637._111844.j
[2025-10-24 12:44:26] 2025-10-24 12:43:42,570 | INFO     | adding to output.list: log.46771637._111844.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/0f/log.46771637._111844.job.log.tg
[2025-10-24 12:44:26] 2025-10-24 12:43:42,571 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-24 12:44:26] 2025-10-24 12:43:42,571 | INFO     | summary of transferred files:
[2025-10-24 12:44:26] 2025-10-24 12:43:42,572 | INFO     |  -- lfn=log.46771637._111844.job.log.tgz.1, status_code=0, status=transferred
[2025-10-24 12:44:26] 2025-10-24 12:43:42,572 | INFO     | stage-out finished correctly
[2025-10-24 12:44:26] 2025-10-24 12:43:42,991 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-24 12:44:26] 2025-10-24 12:43:44,022 | INFO     | time since job start (3390s) is within the limit (172800.0s)
[2025-10-24 12:44:26] 2025-10-24 12:43:45,381 | INFO     | job 6855074747 has state=finished
[2025-10-24 12:44:26] 2025-10-24 12:43:45,382 | INFO     | preparing for final server update for job 6855074747 in state='finished'
[2025-10-24 12:44:26] 2025-10-24 12:43:45,382 | INFO     | this job has now completed (state=finished)
[2025-10-24 12:44:26] 2025-10-24 12:43:45,382 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-24 12:44:26] 2025-10-24 12:43:45,382 | INFO     | log transfer has been attempted: DONE
[2025-10-24 12:44:26] 2025-10-24 12:43:45,383 | INFO     | job 6855074747 has finished - writing final server update
[2025-10-24 12:44:26] 2025-10-24 12:43:45,383 | INFO     | total number of processed events: 400 (read)
[2025-10-24 12:44:26] 2025-10-24 12:43:45,384 | INFO     | executing command: lscpu
[2025-10-24 12:44:26] 2025-10-24 12:43:45,578 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-24 12:44:26] 2025-10-24 12:43:46,028 | INFO     | time since job start (3392s) is within the limit (172800.0s)
[2025-10-24 12:44:26] 2025-10-24 12:43:46,141 | WARNING  | process 746524 can no longer be monitored (due to stat problems) - aborting
[2025-10-24 12:44:26] 2025-10-24 12:43:46,141 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6855074747/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 12:44:26] 2025-10-24 12:43:46,959 | INFO     | number of running child processes to parent process 746524: 1
[2025-10-24 12:44:26] 2025-10-24 12:43:46,959 | INFO     | maximum number of monitored processes: 6
[2025-10-24 12:44:26] 2025-10-24 12:43:48,031 | INFO     | time since job start (3394s) is within the limit (172800.0s)
[2025-10-24 12:44:26] 2025-10-24 12:43:49,462 | INFO     | monitor loop #235: job 0:6855074747 is in state 'finished'
[2025-10-24 12:44:26] 2025-10-24 12:43:49,463 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 12:44:26] 2025-10-24 12:43:50,037 | INFO     | time since job start (3396s) is within the limit (172800.0s)
[2025-10-24 12:44:26] 2025-10-24 12:43:51,966 | INFO     | monitor loop #236: job 0:6855074747 is in state 'finished'
[2025-10-24 12:44:26] 2025-10-24 12:43:51,966 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 12:44:26] 2025-10-24 12:43:52,042 | INFO     | time since job start (3398s) is within the limit (172800.0s)
[2025-10-24 12:44:26] 2025-10-24 12:43:52,080 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 12:44:26] 2025-10-24 12:43:52,142 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2354.7451210937493
[2025-10-24 12:44:26] 2025-10-24 12:43:52,231 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6855074747/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 12:44:26] 2025-10-24 12:43:52,232 | INFO     | extracted standard info from prmon json
[2025-10-24 12:44:26] 2025-10-24 12:43:52,232 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 12:44:26] 2025-10-24 12:43:52,232 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 12:44:26] 2025-10-24 12:43:52,233 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 12:44:26] 2025-10-24 12:43:52,233 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 12:44:26] 2025-10-24 12:43:52,234 | INFO     | fitting pss+swap vs Time
[2025-10-24 12:44:26] 2025-10-24 12:43:52,235 | INFO     | sum of square deviations: 34277852.0
[2025-10-24 12:44:26] 2025-10-24 12:43:52,235 | INFO     | sum of deviations: -403286738.0000001
[2025-10-24 12:44:26] 2025-10-24 12:43:52,235 | INFO     | mean x: 1761308204.5
[2025-10-24 12:44:26] 2025-10-24 12:43:52,235 | INFO     | mean y: 2702589.4583333335
[2025-10-24 12:44:26] 2025-10-24 12:43:52,235 | INFO     | -- intersect: 20724894878.678852
[2025-10-24 12:44:26] 2025-10-24 12:43:52,235 | INFO     | intersect: 20724894878.678852
[2025-10-24 12:44:26] 2025-10-24 12:43:52,235 | INFO     | chi2: 0.002281769777793198
[2025-10-24 12:44:26] 2025-10-24 12:43:52,236 | INFO     | -- intersect: 20724894878.678852
[2025-10-24 12:44:26] 2025-10-24 12:43:52,236 | INFO     | current memory leak: -11.77 B/s (using 48 data points, chi2=0.00)
[2025-10-24 12:44:26] 2025-10-24 12:43:52,236 | INFO     | could have reported an average CPU frequency of 2330 MHz (5 samples)
[2025-10-24 12:44:26] 2025-10-24 12:43:52,236 | INFO     | ..............................
[2025-10-24 12:44:26] 2025-10-24 12:43:52,236 | INFO     | . Timing measurements:
[2025-10-24 12:44:26] 2025-10-24 12:43:52,236 | INFO     | . get job = 0 s
[2025-10-24 12:44:26] 2025-10-24 12:43:52,236 | INFO     | . initial setup = 1 s
[2025-10-24 12:44:26] 2025-10-24 12:43:52,236 | INFO     | . payload setup = 7 s
[2025-10-24 12:44:26] 2025-10-24 12:43:52,236 | INFO     | . stage-in = 0 s
[2025-10-24 12:44:26] 2025-10-24 12:43:52,237 | INFO     | . payload execution = 3360 s
[2025-10-24 12:44:26] 2025-10-24 12:43:52,237 | INFO     | . stage-out = 0 s
[2025-10-24 12:44:26] 2025-10-24 12:43:52,237 | INFO     | . log creation = 0 s
[2025-10-24 12:44:26] 2025-10-24 12:43:52,237 | INFO     | ..............................
[2025-10-24 12:44:26] 2025-10-24 12:43:52,336 | INFO     | 
[2025-10-24 12:44:26] 2025-10-24 12:43:52,336 | INFO     | job summary report
[2025-10-24 12:44:26] 2025-10-24 12:43:52,336 | INFO     | --------------------------------------------------
[2025-10-24 12:44:26] 2025-10-24 12:43:52,336 | INFO     | PanDA job id: 6855074747
[2025-10-24 12:44:26] 2025-10-24 12:43:52,336 | INFO     | task id: 46771637
[2025-10-24 12:44:26] 2025-10-24 12:43:52,336 | INFO     | errors: (none)
[2025-10-24 12:44:26] 2025-10-24 12:43:52,336 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | pilot state: finished 
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | transexitcode: 0
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | exeerrorcode: 0
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | exeerrordiag: 
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | exitcode: 0
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | exitmsg: OK
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | cpuconsumptiontime: 36633 s
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | nevents: 400
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | neventsw: 0
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | pid: 746524
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | pgrp: 746524
[2025-10-24 12:44:26] 2025-10-24 12:43:52,337 | INFO     | corecount: 12
[2025-10-24 12:44:26] 2025-10-24 12:43:52,338 | INFO     | event service: False
[2025-10-24 12:44:26] 2025-10-24 12:43:52,338 | INFO     | sizes: {0: 2348765, 1: 2348964, 7: 2349226, 11: 2349254, 3369: 2375054, 3371: 2384238, 3381: 2384408}
[2025-10-24 12:44:26] 2025-10-24 12:43:52,338 | INFO     | --------------------------------------------------
[2025-10-24 12:44:26] 2025-10-24 12:43:52,338 | INFO     | 
[2025-10-24 12:44:26] 2025-10-24 12:43:52,338 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-10-24 12:44:26] 2025-10-24 12:43:52,366 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,366 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,366 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,366 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,367 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 12:44:26] 2025-10-24 12:43:52,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,368 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 12:44:26] 2025-10-24 12:43:52,368 | INFO     | job 6855074747 has completed (purged errors)
[2025-10-24 12:44:26] 2025-10-24 12:43:52,368 | INFO     | overall cleanup function is called
[2025-10-24 12:44:26] 2025-10-24 12:43:53,378 | INFO     | --- collectZombieJob: --- 10, [746524]
[2025-10-24 12:44:26] 2025-10-24 12:43:53,378 | INFO     | zombie collector waiting for pid 746524
[2025-10-24 12:44:26] 2025-10-24 12:43:53,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 12:44:26] 2025-10-24 12:43:53,378 | INFO     | collected zombie processes
[2025-10-24 12:44:26] 2025-10-24 12:43:53,378 | INFO     | will attempt to kill all subprocesses of pid=746524
[2025-10-24 12:44:26] 2025-10-24 12:43:54,170 | INFO     | process IDs to be killed: [746524] (in reverse order)
[2025-10-24 12:44:26] 2025-10-24 12:43:54,441 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 12:44:26] 2025-10-24 12:43:54,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 12:44:26] 2025-10-24 12:43:54,469 | INFO     | did not find any defunct processes belonging to 746524
[2025-10-24 12:44:26] 2025-10-24 12:43:54,496 | INFO     | did not find any defunct processes belonging to 746524
[2025-10-24 12:44:26] 2025-10-24 12:43:54,496 | INFO     | ready for new job
[2025-10-24 12:44:26] 2025-10-24 12:43:54,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 12:44:26] 2025-10-24 12:43:54,499 | INFO     | ***************************************
[2025-10-24 12:44:26] 2025-10-24 12:43:54,499 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 12:44:26] 2025-10-24 12:43:54,499 | INFO     | ***************************************
[2025-10-24 12:44:26] 2025-10-24 12:43:54,499 | INFO     | 
[2025-10-24 12:44:26] 2025-10-24 12:43:54,536 | INFO     | architecture information:
[2025-10-24 12:44:26] 2025-10-24 12:43:54,537 | INFO     | executing command: cat /etc/os-release
[2025-10-24 12:44:26] 2025-10-24 12:43:54,559 | INFO     | cat /etc/os-release:
[2025-10-24 12:44:26] NAME="CentOS Linux"
[2025-10-24 12:44:26] VERSION="7 (Core)"
[2025-10-24 12:44:26] ID="centos"
[2025-10-24 12:44:26] ID_LIKE="rhel fedora"
[2025-10-24 12:44:26] VERSION_ID="7"
[2025-10-24 12:44:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 12:44:26] ANSI_COLOR="0;31"
[2025-10-24 12:44:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 12:44:26] HOME_URL="https://www.centos.org/"
[2025-10-24 12:44:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 12:44:26] 
[2025-10-24 12:44:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 12:44:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 12:44:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 12:44:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 12:44:26] 
[2025-10-24 12:44:26] 2025-10-24 12:43:54,559 | INFO     | ***************************************
[2025-10-24 12:44:26] 2025-10-24 12:43:55,063 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-10-24 12:44:26] 2025-10-24 12:43:55,090 | INFO     | sufficient remaining disk space (1725606920192 B)
[2025-10-24 12:44:26] 2025-10-24 12:43:55,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 12:44:26] 2025-10-24 12:43:55,090 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 12:44:26] 2025-10-24 12:43:55,091 | INFO     | update_server=False
[2025-10-24 12:44:26] 2025-10-24 12:43:55,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 12:44:26] 2025-10-24 12:43:55,182 | INFO     | all job control threads have been joined
[2025-10-24 12:44:26] 2025-10-24 12:43:55,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 12:44:26] 2025-10-24 12:43:55,475 | INFO     | aborting loop
[2025-10-24 12:44:26] 2025-10-24 12:43:55,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 12:44:26] 2025-10-24 12:43:55,873 | INFO     | all payload control threads have been joined
[2025-10-24 12:44:26] 2025-10-24 12:43:56,096 | INFO     | [job] retrieve thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:56,160 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:56,177 | INFO     | all data control threads have been joined
[2025-10-24 12:44:26] 2025-10-24 12:43:56,186 | INFO     | [job] control thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:56,248 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:56,322 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:56,478 | INFO     | [job] job monitor thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:56,532 | INFO     | [data] copytool_in thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:56,762 | INFO     | [payload] failed_post thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:56,878 | INFO     | [payload] control thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:57,183 | INFO     | [data] control thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:57,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 12:44:26] 2025-10-24 12:43:57,394 | INFO     | [job] validate thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:57,531 | INFO     | [payload] validate_post thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:57,692 | INFO     | [data] copytool_out thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:43:58,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 12:44:26] 2025-10-24 12:43:58,352 | INFO     | [job] queue monitor thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:44:02,099 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:44:06,026 | INFO     | job.realtimelogging is not enabled
[2025-10-24 12:44:26] 2025-10-24 12:44:07,032 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 12:44:26] 2025-10-24 12:44:19,114 | INFO     | [monitor] cgroup control has ended
[2025-10-24 12:44:26] 2025-10-24 12:44:20,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140465756260160)>', '<ExcThread(monitor, started 140465093474048)>']
[2025-10-24 12:44:26] 2025-10-24 12:44:25,401 | INFO     | all workflow threads have been joined
[2025-10-24 12:44:26] 2025-10-24 12:44:25,401 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 12:44:26] 2025-10-24 12:44:25,402 | INFO     | traces error code: 0
[2025-10-24 12:44:26] 2025-10-24 12:44:25,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 12:44:26] 2025-10-24 12:44:26,098 | INFO     | PID=723795 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 12:44:26] 2025-10-24 12:44:26,098 | INFO     | .. there are 17 such processes running
[2025-10-24 12:44:26] 2025-10-24 12:44:26,099 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 12:44:26] 2025-10-24 12:44:26,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 12:44:26] 2025-10-24 12:44:26,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 12:44:26] 2025-10-24 12:44:26,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 12:44:26] 2025-10-24 12:44:26,100 | INFO     | [monitor] control thread has ended
[2025-10-24 12:44:26] 2025-10-24 12:44:26,263 [wrapper] ==== pilot stdout END ====
[2025-10-24 12:44:26] 2025-10-24 12:44:26,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 12:44:26] 2025-10-24 12:44:26,271 [wrapper] pilotpid: 723795
[2025-10-24 12:44:26] 2025-10-24 12:44:26,274 [wrapper] Pilot exit status: 0
[2025-10-24 12:44:26] 2025-10-24 12:44:26,289 [wrapper] pandaids: 6855074747
[2025-10-24 12:44:26] 2025-10-24 12:44:26,470 [wrapper] cleanup supervisor_pilot 1050089 723796
[2025-10-24 12:44:26] 2025-10-24 12:44:26,474 [wrapper] Test setup, not cleaning
[2025-10-24 12:44:26] 2025-10-24 12:44:26,478 [wrapper] apfmon messages muted
[2025-10-24 12:44:26] 2025-10-24 12:44:26,480 [wrapper] ==== wrapper stdout END ====
[2025-10-24 12:44:26] 2025-10-24 12:44:26,483 [wrapper] ==== wrapper stderr END ====
[2025-10-24 12:44:26]  *** Error codes and diagnostics ***
[2025-10-24 12:44:26]     "exeErrorCode": 0,
[2025-10-24 12:44:26]     "exeErrorDiag": "",
[2025-10-24 12:44:26]     "pilotErrorCode": 0,
[2025-10-24 12:44:26]     "pilotErrorDiag": "",
[2025-10-24 12:44:26]  *** Listing of results directory ***
[2025-10-24 12:44:26] total 437704
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc    557409 Oct 23 20:24 pilot3.tar.gz
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc      5112 Oct 23 21:06 queuedata.json
[2025-10-24 12:44:26] -rwx------ 1 boinc boinc     36292 Oct 23 21:06 runpilot2-wrapper.sh
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc       100 Oct 24 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 12:44:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 24 11:46 run_atlas
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc       105 Oct 24 11:46 job.xml
[2025-10-24 12:44:26] -rw-r--r-- 2 boinc boinc     15120 Oct 24 11:47 start_atlas.sh
[2025-10-24 12:44:26] drwxrwx--x 2 boinc boinc      4096 Oct 24 11:47 shared
[2025-10-24 12:44:26] -rw-r--r-- 2 boinc boinc    569688 Oct 24 11:47 input.tar.gz
[2025-10-24 12:44:26] -rw-r--r-- 2 boinc boinc 231896611 Oct 24 11:47 EVNT.46771634._004464.pool.root.1
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc         0 Oct 24 11:47 boinc_setup_complete
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc      9398 Oct 24 11:47 init_data.xml
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc         0 Oct 24 11:47 boinc_lockfile
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc      2562 Oct 24 11:47 pandaJob.out
[2025-10-24 12:44:26] -rw------- 1 boinc boinc    978572 Oct 24 11:47 agis_schedconf.cvmfs.json
[2025-10-24 12:44:26] -rw------- 1 boinc boinc   1560740 Oct 24 11:47 agis_ddmendpoints.agis.ALL.json
[2025-10-24 12:44:26] drwx------ 5 boinc boinc      4096 Oct 24 11:47 pilot3
[2025-10-24 12:44:26] -rw------- 1 boinc boinc 210688352 Oct 24 12:43 HITS.46771637._111844.pool.root.1
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc       530 Oct 24 12:43 boinc_task_state.xml
[2025-10-24 12:44:26] -rw------- 1 boinc boinc      1022 Oct 24 12:43 memory_monitor_summary.json
[2025-10-24 12:44:26] -rw------- 1 boinc boinc    359428 Oct 24 12:43 log.46771637._111844.job.log.tgz.1
[2025-10-24 12:44:26] -rw------- 1 boinc boinc      7739 Oct 24 12:43 heartbeat.json
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc      8192 Oct 24 12:44 boinc_mmap_file
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc        27 Oct 24 12:44 wrapper_checkpoint.txt
[2025-10-24 12:44:26] -rw------- 1 boinc boinc       823 Oct 24 12:44 pilotlog.txt
[2025-10-24 12:44:26] -rw------- 1 boinc boinc        95 Oct 24 12:44 pilot_heartbeat.json
[2025-10-24 12:44:26] -rw------- 1 boinc boinc    499079 Oct 24 12:44 log.46771637._111844.job.log.1
[2025-10-24 12:44:26] -rw------- 1 boinc boinc       357 Oct 24 12:44 output.list
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc       620 Oct 24 12:44 runtime_log
[2025-10-24 12:44:26] -rw------- 1 boinc boinc    880640 Oct 24 12:44 result.tar.gz
[2025-10-24 12:44:26] -rw------- 1 boinc boinc       643 Oct 24 12:44 z4mKDmMhHW8n9Rq4apOajLDm4fhM0noT9bVof3QYDmP8jMDm7TvrWn.diag
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc      8672 Oct 24 12:44 runtime_log.err
[2025-10-24 12:44:26] -rw-r--r-- 1 boinc boinc     21875 Oct 24 12:44 stderr.txt
[2025-10-24 12:44:26] HITS file was successfully produced:
[2025-10-24 12:44:26] -rw------- 1 boinc boinc 210688352 Oct 24 12:43 shared/HITS.pool.root.1
[2025-10-24 12:44:26]  *** Contents of shared directory: ***
[2025-10-24 12:44:26] total 433660
[2025-10-24 12:44:26] -rw-r--r-- 2 boinc boinc     15120 Oct 24 11:47 start_atlas.sh
[2025-10-24 12:44:26] -rw-r--r-- 2 boinc boinc    569688 Oct 24 11:47 input.tar.gz
[2025-10-24 12:44:26] -rw-r--r-- 2 boinc boinc 231896611 Oct 24 11:47 ATLAS.root_0
[2025-10-24 12:44:26] -rw------- 1 boinc boinc 210688352 Oct 24 12:43 HITS.pool.root.1
[2025-10-24 12:44:26] -rw------- 1 boinc boinc    880640 Oct 24 12:44 result.tar.gz
12:44:27 (715632): run_atlas exited; CPU time 36857.036322
12:44:27 (715632): called boinc_finish(0)

</stderr_txt>
]]>

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