Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:16:34 (2236611): wrapper (7.7.26015): starting
00:16:34 (2236611): wrapper: running run_atlas (--nthreads 12)
[2025-10-24 00:16:34] Arguments: --nthreads 12
[2025-10-24 00:16:34] Threads: 12
[2025-10-24 00:16:34] Checking for CVMFS
[2025-10-24 00:16:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 00:16:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 00:16:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 00:16:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 00:16:35] 2.13.2.0 2754702 146033 330516 152062 2 158 28035616 32935936 33693 16776704 0 1126123942 99.720 831887084 33254 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-24 00:16:35] CVMFS is ok
[2025-10-24 00:16:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 00:16:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 00:16:35] Further information can be found at the LHC@home message board.
[2025-10-24 00:16:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 00:16:35] Checking for apptainer binary...
[2025-10-24 00:16:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 00:16:35] Running /usr/bin/apptainer --version
[2025-10-24 00:16:35] apptainer version 1.4.3-1.el9
[2025-10-24 00:16:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 00:16:35] c7-9-14.aglt2.org
[2025-10-24 00:16:35] apptainer works
[2025-10-24 00:16:35] Set ATHENA_PROC_NUMBER=12
[2025-10-24 00:16:35] Set ATHENA_CORE_NUMBER=12
[2025-10-24 00:16:35] Starting ATLAS job with PandaID=6855073864
[2025-10-24 00:16:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:07 (2236611): BOINC client no longer exists - exiting
00:20:07 (2236611): timer handler: client dead, exiting
00:27:51 (2357184): wrapper (7.7.26015): starting
00:27:51 (2357184): wrapper: running run_atlas (--nthreads 12)
[2025-10-24 00:27:51] Arguments: --nthreads 12
[2025-10-24 00:27:51] Threads: 12
[2025-10-24 00:27:51] This job has been restarted, cleaning up previous attempt
[2025-10-24 00:27:51] Checking for CVMFS
[2025-10-24 00:27:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 00:27:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 00:27:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 00:27:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 00:27:52] 2.13.2.0 2754702 146044 329244 152062 3 458 28514443 32935936 30214 16776704 0 1126403184 99.720 832022516 33250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-24 00:27:52] CVMFS is ok
[2025-10-24 00:27:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-24 00:27:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-24 00:27:52] Further information can be found at the LHC@home message board.
[2025-10-24 00:27:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 00:27:52] Checking for apptainer binary...
[2025-10-24 00:27:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 00:27:52] Running /usr/bin/apptainer --version
[2025-10-24 00:27:52] apptainer version 1.4.3-1.el9
[2025-10-24 00:27:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 00:27:52] c7-9-14.aglt2.org
[2025-10-24 00:27:52] apptainer works
[2025-10-24 00:27:52] Set ATHENA_PROC_NUMBER=12
[2025-10-24 00:27:52] Set ATHENA_CORE_NUMBER=12
[2025-10-24 00:27:52] Starting ATLAS job with PandaID=6855073864
[2025-10-24 00:27:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 04:19:50]  *** The last 200 lines of the pilot log: ***
[2025-10-24 04:19:50] 2025-10-24 08:18:41,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 04:19:50] 2025-10-24 08:18:41,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 04:19:50] 2025-10-24 08:18:41,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 04:19:50] 2025-10-24 08:18:41,189 | INFO     | fitting pss+swap vs Time
[2025-10-24 04:19:50] 2025-10-24 08:18:41,189 | INFO     | sum of square deviations: 3579276412.5
[2025-10-24 04:19:50] 2025-10-24 08:18:41,190 | INFO     | sum of deviations: 28574448075.0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,190 | INFO     | mean x: 1761287035.5
[2025-10-24 04:19:50] 2025-10-24 08:18:41,190 | INFO     | mean y: 2306225.0088495575
[2025-10-24 04:19:50] 2025-10-24 08:18:41,190 | INFO     | -- intersect: -14058581826.35939
[2025-10-24 04:19:50] 2025-10-24 08:18:41,190 | INFO     | intersect: -14058581826.35939
[2025-10-24 04:19:50] 2025-10-24 08:18:41,190 | INFO     | chi2: 2.4274027198564787
[2025-10-24 04:19:50] 2025-10-24 08:18:41,191 | INFO     | sum of square deviations: 3346927870.0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,192 | INFO     | sum of deviations: 40601982531.00001
[2025-10-24 04:19:50] 2025-10-24 08:18:41,192 | INFO     | mean x: 1761286883.0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,192 | INFO     | mean y: 2313961.5520361993
[2025-10-24 04:19:50] 2025-10-24 08:18:41,192 | INFO     | -- intersect: -21364067996.25378
[2025-10-24 04:19:50] 2025-10-24 08:18:41,192 | INFO     | intersect: -21364067996.25378
[2025-10-24 04:19:50] 2025-10-24 08:18:41,192 | INFO     | chi2: 1.743728298172283
[2025-10-24 04:19:50] 2025-10-24 08:18:41,192 | INFO     | current chi2=1.743728298172283 (change=28.164853573395444 %)
[2025-10-24 04:19:50] 2025-10-24 08:18:41,192 | INFO     | sum of square deviations: 3124858590.0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,193 | INFO     | sum of deviations: 38776096340.5
[2025-10-24 04:19:50] 2025-10-24 08:18:41,193 | INFO     | mean x: 1761286730.5
[2025-10-24 04:19:50] 2025-10-24 08:18:41,193 | INFO     | mean y: 2312707.8935185187
[2025-10-24 04:19:50] 2025-10-24 08:18:41,193 | INFO     | -- intersect: -21853339949.05191
[2025-10-24 04:19:50] 2025-10-24 08:18:41,193 | INFO     | intersect: -21853339949.05191
[2025-10-24 04:19:50] 2025-10-24 08:18:41,193 | INFO     | chi2: 1.7442448211347292
[2025-10-24 04:19:50] 2025-10-24 08:18:41,193 | INFO     | current chi2=1.7442448211347292 (change=-0.029621757184740274 %)
[2025-10-24 04:19:50] 2025-10-24 08:18:41,193 | INFO     | right removable region: 215
[2025-10-24 04:19:50] 2025-10-24 08:18:41,194 | INFO     | sum of square deviations: 3346927870.0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,194 | INFO     | sum of deviations: -10484297713.0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,194 | INFO     | mean x: 1761287188.0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,195 | INFO     | mean y: 2331681.2081447965
[2025-10-24 04:19:50] 2025-10-24 08:18:41,195 | INFO     | -- intersect: 5519588088.973097
[2025-10-24 04:19:50] 2025-10-24 08:18:41,195 | INFO     | intersect: 5519588088.973097
[2025-10-24 04:19:50] 2025-10-24 08:18:41,195 | INFO     | chi2: 0.7621213559603371
[2025-10-24 04:19:50] 2025-10-24 08:18:41,195 | INFO     | current chi2=0.7621213559603371 (change=68.60342333284532 %)
[2025-10-24 04:19:50] 2025-10-24 08:18:41,195 | INFO     | sum of square deviations: 3124858590.0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,196 | INFO     | sum of deviations: -14562976916.500002
[2025-10-24 04:19:50] 2025-10-24 08:18:41,196 | INFO     | mean x: 1761287340.5
[2025-10-24 04:19:50] 2025-10-24 08:18:41,196 | INFO     | mean y: 2334470.6805555555
[2025-10-24 04:19:50] 2025-10-24 08:18:41,196 | INFO     | -- intersect: 8210573705.923894
[2025-10-24 04:19:50] 2025-10-24 08:18:41,196 | INFO     | intersect: 8210573705.923894
[2025-10-24 04:19:50] 2025-10-24 08:18:41,196 | INFO     | chi2: 0.7430323685080118
[2025-10-24 04:19:50] 2025-10-24 08:18:41,196 | INFO     | current chi2=0.7430323685080118 (change=2.5047175627655274 %)
[2025-10-24 04:19:50] 2025-10-24 08:18:41,196 | INFO     | left removable region: 20
[2025-10-24 04:19:50] 2025-10-24 08:18:41,196 | INFO     | sum of square deviations: 2299168690.0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,197 | INFO     | sum of deviations: -4588973758.0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,197 | INFO     | mean x: 1761287310.0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,197 | INFO     | mean y: 2343505.1333333333
[2025-10-24 04:19:50] 2025-10-24 08:18:41,197 | INFO     | -- intersect: 3517745085.2968187
[2025-10-24 04:19:50] 2025-10-24 08:18:41,197 | INFO     | intersect: 3517745085.2968187
[2025-10-24 04:19:50] 2025-10-24 08:18:41,197 | INFO     | chi2: 0.035560587065793896
[2025-10-24 04:19:50] 2025-10-24 08:18:41,197 | INFO     | -- intersect: 3517745085.2968187
[2025-10-24 04:19:50] 2025-10-24 08:18:41,197 | INFO     | current memory leak: -2.00 B/s (using 195 data points, chi2=0.04)
[2025-10-24 04:19:50] 2025-10-24 08:18:41,198 | INFO     | could have reported an average CPU frequency of 3702 MHz (11 samples)
[2025-10-24 04:19:50] 2025-10-24 08:18:41,198 | INFO     | ..............................
[2025-10-24 04:19:50] 2025-10-24 08:18:41,198 | INFO     | . Timing measurements:
[2025-10-24 04:19:50] 2025-10-24 08:18:41,198 | INFO     | . get job = 0 s
[2025-10-24 04:19:50] 2025-10-24 08:18:41,198 | INFO     | . initial setup = 1 s
[2025-10-24 04:19:50] 2025-10-24 08:18:41,198 | INFO     | . payload setup = 14 s
[2025-10-24 04:19:50] 2025-10-24 08:18:41,198 | INFO     | . stage-in = 0 s
[2025-10-24 04:19:50] 2025-10-24 08:18:41,198 | INFO     | . payload execution = 13754 s
[2025-10-24 04:19:50] 2025-10-24 08:18:41,198 | INFO     | . stage-out = 2 s
[2025-10-24 04:19:50] 2025-10-24 08:18:41,198 | INFO     | . log creation = 0 s
[2025-10-24 04:19:50] 2025-10-24 08:18:41,198 | INFO     | ..............................
[2025-10-24 04:19:50] 2025-10-24 08:18:41,713 | INFO     | 
[2025-10-24 04:19:50] 2025-10-24 08:18:41,715 | INFO     | job summary report
[2025-10-24 04:19:50] 2025-10-24 08:18:41,715 | INFO     | --------------------------------------------------
[2025-10-24 04:19:50] 2025-10-24 08:18:41,715 | INFO     | PanDA job id: 6855073864
[2025-10-24 04:19:50] 2025-10-24 08:18:41,715 | INFO     | task id: 46771637
[2025-10-24 04:19:50] 2025-10-24 08:18:41,715 | INFO     | errors: (none)
[2025-10-24 04:19:50] 2025-10-24 08:18:41,715 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 04:19:50] 2025-10-24 08:18:41,715 | INFO     | pilot state: finished 
[2025-10-24 04:19:50] 2025-10-24 08:18:41,715 | INFO     | transexitcode: 0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,715 | INFO     | exeerrorcode: 0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,715 | INFO     | exeerrordiag: 
[2025-10-24 04:19:50] 2025-10-24 08:18:41,715 | INFO     | exitcode: 0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | exitmsg: OK
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | cpuconsumptiontime: 27800 s
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | nevents: 400
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | neventsw: 0
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | pid: 2435543
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | pgrp: 2435543
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | corecount: 12
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | event service: False
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | sizes: {0: 2348935, 11: 2348935, 15: 2349225, 21: 2349253, 13773: 2379719, 13776: 2388717, 13778: 2388901, 13786: 2389095}
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | --------------------------------------------------
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | 
[2025-10-24 04:19:50] 2025-10-24 08:18:41,716 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-24 04:19:50] 2025-10-24 08:18:41,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 04:19:50] 2025-10-24 08:18:41,740 | INFO     | job 6855073864 has completed (purged errors)
[2025-10-24 04:19:50] 2025-10-24 08:18:41,740 | INFO     | overall cleanup function is called
[2025-10-24 04:19:50] 2025-10-24 08:18:42,748 | INFO     | --- collectZombieJob: --- 10, [2435543]
[2025-10-24 04:19:50] 2025-10-24 08:18:42,748 | INFO     | zombie collector waiting for pid 2435543
[2025-10-24 04:19:50] 2025-10-24 08:18:42,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 04:19:50] 2025-10-24 08:18:42,748 | INFO     | collected zombie processes
[2025-10-24 04:19:50] 2025-10-24 08:18:42,748 | INFO     | will attempt to kill all subprocesses of pid=2435543
[2025-10-24 04:19:50] 2025-10-24 08:18:43,091 | INFO     | process IDs to be killed: [2435543] (in reverse order)
[2025-10-24 04:19:50] 2025-10-24 08:18:43,239 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 04:19:50] 2025-10-24 08:18:43,240 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 04:19:50] 2025-10-24 08:18:43,258 | INFO     | did not find any defunct processes belonging to 2435543
[2025-10-24 04:19:50] 2025-10-24 08:18:43,276 | INFO     | did not find any defunct processes belonging to 2435543
[2025-10-24 04:19:50] 2025-10-24 08:18:43,277 | INFO     | ready for new job
[2025-10-24 04:19:50] 2025-10-24 08:18:43,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 04:19:50] 2025-10-24 08:18:43,278 | INFO     | ***************************************
[2025-10-24 04:19:50] 2025-10-24 08:18:43,279 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 04:19:50] 2025-10-24 08:18:43,279 | INFO     | ***************************************
[2025-10-24 04:19:50] 2025-10-24 08:18:43,279 | INFO     | 
[2025-10-24 04:19:50] 2025-10-24 08:18:43,283 | INFO     | architecture information:
[2025-10-24 04:19:50] 2025-10-24 08:18:43,284 | INFO     | executing command: cat /etc/os-release
[2025-10-24 04:19:50] 2025-10-24 08:18:43,298 | INFO     | cat /etc/os-release:
[2025-10-24 04:19:50] NAME="CentOS Linux"
[2025-10-24 04:19:50] VERSION="7 (Core)"
[2025-10-24 04:19:50] ID="centos"
[2025-10-24 04:19:50] ID_LIKE="rhel fedora"
[2025-10-24 04:19:50] VERSION_ID="7"
[2025-10-24 04:19:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 04:19:50] ANSI_COLOR="0;31"
[2025-10-24 04:19:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 04:19:50] HOME_URL="https://www.centos.org/"
[2025-10-24 04:19:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 04:19:50] 
[2025-10-24 04:19:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 04:19:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 04:19:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 04:19:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 04:19:50] 
[2025-10-24 04:19:50] 2025-10-24 08:18:43,298 | INFO     | ***************************************
[2025-10-24 04:19:50] 2025-10-24 08:18:43,803 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-24 04:19:50] 2025-10-24 08:18:43,826 | INFO     | sufficient remaining disk space (70649905152 B)
[2025-10-24 04:19:50] 2025-10-24 08:18:43,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 04:19:50] 2025-10-24 08:18:43,826 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 04:19:50] 2025-10-24 08:18:43,826 | INFO     | update_server=False
[2025-10-24 04:19:50] 2025-10-24 08:18:43,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 04:19:50] 2025-10-24 08:18:43,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 04:19:50] 2025-10-24 08:18:44,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 04:19:50] 2025-10-24 08:18:44,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 04:19:50] 2025-10-24 08:18:44,282 | INFO     | aborting loop
[2025-10-24 04:19:50] 2025-10-24 08:18:44,313 | INFO     | all data control threads have been joined
[2025-10-24 04:19:50] 2025-10-24 08:18:44,488 | INFO     | all job control threads have been joined
[2025-10-24 04:19:50] 2025-10-24 08:18:44,833 | INFO     | [job] retrieve thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:44,954 | INFO     | all payload control threads have been joined
[2025-10-24 04:19:50] 2025-10-24 08:18:45,027 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:45,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:45,189 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:45,287 | INFO     | [job] job monitor thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:45,314 | INFO     | [data] copytool_in thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:45,320 | INFO     | [data] control thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:45,348 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:45,495 | INFO     | [job] control thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:45,961 | INFO     | [payload] control thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:46,068 | INFO     | [data] copytool_out thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:46,073 | INFO     | [job] validate thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:46,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 04:19:50] 2025-10-24 08:18:46,344 | INFO     | [payload] validate_post thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:46,423 | INFO     | [payload] failed_post thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:47,258 | INFO     | [job] queue monitor thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:18:47,969 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 04:19:50] 2025-10-24 08:19:13,800 | INFO     | PID=2385474 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-24 04:19:50] 2025-10-24 08:19:13,800 | INFO     | .. there are 31 such processes running
[2025-10-24 04:19:50] 2025-10-24 08:19:13,800 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 04:19:50] 2025-10-24 08:19:13,800 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 04:19:50] 2025-10-24 08:19:13,800 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 04:19:50] 2025-10-24 08:19:43,818 | INFO     | [monitor] cgroup control has ended
[2025-10-24 04:19:50] 2025-10-24 08:19:44,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891348174656)>', '<ExcThread(monitor, started 139890608027392)>']
[2025-10-24 04:19:50] 2025-10-24 08:19:44,958 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 04:19:50] 2025-10-24 08:19:44,958 | INFO     | [monitor] control thread has ended
[2025-10-24 04:19:50] 2025-10-24 08:19:49,476 | INFO     | all workflow threads have been joined
[2025-10-24 04:19:50] 2025-10-24 08:19:49,477 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 04:19:50] 2025-10-24 08:19:49,478 | INFO     | traces error code: 0
[2025-10-24 04:19:50] 2025-10-24 08:19:49,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 04:19:50] 2025-10-24 08:19:49,673 [wrapper] ==== pilot stdout END ====
[2025-10-24 04:19:50] 2025-10-24 08:19:49,699 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 04:19:50] 2025-10-24 08:19:49,701 [wrapper] pilotpid: 2385474
[2025-10-24 04:19:50] 2025-10-24 08:19:49,703 [wrapper] Pilot exit status: 0
[2025-10-24 04:19:50] 2025-10-24 08:19:49,714 [wrapper] pandaids: 6855073864 6855073864
[2025-10-24 04:19:50] 2025-10-24 08:19:49,803 [wrapper] cleanup supervisor_pilot 3526302 2385475
[2025-10-24 04:19:50] 2025-10-24 08:19:49,805 [wrapper] Test setup, not cleaning
[2025-10-24 04:19:50] 2025-10-24 08:19:49,809 [wrapper] apfmon messages muted
[2025-10-24 04:19:50] 2025-10-24 08:19:49,811 [wrapper] ==== wrapper stdout END ====
[2025-10-24 04:19:50] 2025-10-24 08:19:49,813 [wrapper] ==== wrapper stderr END ====
[2025-10-24 04:19:50]  *** Error codes and diagnostics ***
[2025-10-24 04:19:50]     "exeErrorCode": 0,
[2025-10-24 04:19:50]     "exeErrorDiag": "",
[2025-10-24 04:19:50]     "pilotErrorCode": 0,
[2025-10-24 04:19:50]     "pilotErrorDiag": "",
[2025-10-24 04:19:50]  *** Listing of results directory ***
[2025-10-24 04:19:50] total 655996
[2025-10-24 04:19:50] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 23 15:24 pilot3.tar.gz
[2025-10-24 04:19:50] -rwx------. 1 boincer umatlas     36292 Oct 23 16:08 runpilot2-wrapper.sh
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 23 16:08 queuedata.json
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas       100 Oct 24 00:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 04:19:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 24 00:16 run_atlas
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas       105 Oct 24 00:16 job.xml
[2025-10-24 04:19:50] -rw-r--r--. 3 boincer umatlas 227168946 Oct 24 00:16 EVNT.46771634._004431.pool.root.1
[2025-10-24 04:19:50] -rw-r--r--. 3 boincer umatlas 227168946 Oct 24 00:16 ATLAS.root_0
[2025-10-24 04:19:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 24 00:16 start_atlas.sh
[2025-10-24 04:19:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 24 00:16 shared
[2025-10-24 04:19:50] -rw-r--r--. 2 boincer umatlas    569684 Oct 24 00:16 input.tar.gz
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas         0 Oct 24 00:16 boinc_lockfile
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas      2562 Oct 24 00:27 pandaJob.out
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas    978574 Oct 24 00:28 agis_schedconf.cvmfs.json
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas      7160 Oct 24 04:12 init_data.xml
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas 209018175 Oct 24 04:18 HITS.46771637._111069.pool.root.1
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas       529 Oct 24 04:18 boinc_task_state.xml
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas      1049 Oct 24 04:18 memory_monitor_summary.json
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas   1560740 Oct 24 04:18 agis_ddmendpoints.agis.ALL.json
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas    502256 Oct 24 04:18 log.46771637._111069.job.log.tgz.1
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas        96 Oct 24 04:18 pilot_heartbeat.json
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas      7806 Oct 24 04:18 heartbeat.json
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 24 04:19 boinc_mmap_file
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas        27 Oct 24 04:19 wrapper_checkpoint.txt
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas      4824 Oct 24 04:19 pilotlog.txt
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas   1735297 Oct 24 04:19 log.46771637._111069.job.log.1
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas       357 Oct 24 04:19 output.list
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas       620 Oct 24 04:19 runtime_log
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas   2252800 Oct 24 04:19 result.tar.gz
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas      8786 Oct 24 04:19 runtime_log.err
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas       783 Oct 24 04:19 qvDODmHnGW8n9Rq4apOajLDm4fhM0noT9bVof3QYDm52jMDmt39YTn.diag
[2025-10-24 04:19:50] -rw-r--r--. 1 boincer umatlas     23209 Oct 24 04:19 stderr.txt
[2025-10-24 04:19:50] HITS file was successfully produced:
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas 209018175 Oct 24 04:18 shared/HITS.pool.root.1
[2025-10-24 04:19:50]  *** Contents of shared directory: ***
[2025-10-24 04:19:50] total 428752
[2025-10-24 04:19:50] -rw-r--r--. 3 boincer umatlas 227168946 Oct 24 00:16 ATLAS.root_0
[2025-10-24 04:19:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 24 00:16 start_atlas.sh
[2025-10-24 04:19:50] -rw-r--r--. 2 boincer umatlas    569684 Oct 24 00:16 input.tar.gz
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas 209018175 Oct 24 04:18 HITS.pool.root.1
[2025-10-24 04:19:50] -rw-------. 1 boincer umatlas   2252800 Oct 24 04:19 result.tar.gz
04:19:51 (2357184): run_atlas exited; CPU time 28121.745912
04:19:51 (2357184): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN