Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:56 (26603): wrapper (7.7.26015): starting
17:39:56 (26603): wrapper: running run_atlas (--nthreads 8)
[2025-10-24 17:39:56] Arguments: --nthreads 8
[2025-10-24 17:39:56] Threads: 8
[2025-10-24 17:39:56] Checking for CVMFS
[2025-10-24 17:39:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-24 17:39:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-24 17:39:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-24 17:39:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-24 17:39:59] 2.11.2.0 6199 238077 138812 152087 0 60 13812315 25165824 4632 130560 0 160065263 99.915 66695343 3008 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-24 17:39:59] CVMFS is ok
[2025-10-24 17:39:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-24 17:39:59] Checking for apptainer binary...
[2025-10-24 17:39:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-24 17:39:59] Running /usr/bin/apptainer --version
[2025-10-24 17:39:59] apptainer version 1.3.2-1.el7
[2025-10-24 17:39:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-24 17:40:19] cg-vwn228.simple-grid.lan
[2025-10-24 17:40:19] apptainer works
[2025-10-24 17:40:19] Set ATHENA_PROC_NUMBER=8
[2025-10-24 17:40:19] Set ATHENA_CORE_NUMBER=8
[2025-10-24 17:40:19] Starting ATLAS job with PandaID=6855073355
[2025-10-24 17:40:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-24 22:23:35]  *** The last 200 lines of the pilot log: ***
[2025-10-24 22:23:35] 2025-10-24 20:22:38,306 | INFO     | monitor loop #1206: job 0:6855073355 is in state 'finished'
[2025-10-24 22:23:35] 2025-10-24 20:22:38,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-24 22:23:35] 2025-10-24 20:22:38,521 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-24 22:23:35] 2025-10-24 20:22:38,522 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-24 22:23:35] 2025-10-24 20:22:38,524 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6855073355/memory_monitor_summary.json (trf name=prmon)
[2025-10-24 22:23:35] 2025-10-24 20:22:38,525 | INFO     | extracted standard info from prmon json
[2025-10-24 22:23:35] 2025-10-24 20:22:38,525 | INFO     | extracted standard memory fields from prmon json
[2025-10-24 22:23:35] 2025-10-24 20:22:38,525 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-24 22:23:35] 2025-10-24 20:22:38,526 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-24 22:23:35] 2025-10-24 20:22:38,526 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-24 22:23:35] 2025-10-24 20:22:38,536 | INFO     | fitting pss+swap vs Time
[2025-10-24 22:23:35] 2025-10-24 20:22:38,536 | INFO     | sum of square deviations: 5770452380.0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,539 | INFO     | sum of deviations: 63871284334.999985
[2025-10-24 22:23:35] 2025-10-24 20:22:38,539 | INFO     | mean x: 1761329164.0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,539 | INFO     | mean y: 2448396.9735849057
[2025-10-24 22:23:35] 2025-10-24 20:22:38,539 | INFO     | -- intersect: -19493138505.58601
[2025-10-24 22:23:35] 2025-10-24 20:22:38,540 | INFO     | intersect: -19493138505.58601
[2025-10-24 22:23:35] 2025-10-24 20:22:38,540 | INFO     | chi2: 4.226367131655663
[2025-10-24 22:23:35] 2025-10-24 20:22:38,541 | INFO     | sum of square deviations: 5449944045.0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,543 | INFO     | sum of deviations: 79818169013.99994
[2025-10-24 22:23:35] 2025-10-24 20:22:38,543 | INFO     | mean x: 1761329011.5
[2025-10-24 22:23:35] 2025-10-24 20:22:38,543 | INFO     | mean y: 2455857.3
[2025-10-24 22:23:35] 2025-10-24 20:22:38,544 | INFO     | -- intersect: -25793415727.500546
[2025-10-24 22:23:35] 2025-10-24 20:22:38,544 | INFO     | intersect: -25793415727.500546
[2025-10-24 22:23:35] 2025-10-24 20:22:38,544 | INFO     | chi2: 3.47551375732338
[2025-10-24 22:23:35] 2025-10-24 20:22:38,544 | INFO     | current chi2=3.47551375732338 (change=17.765928773872027 %)
[2025-10-24 22:23:35] 2025-10-24 20:22:38,544 | INFO     | right removable region: 259
[2025-10-24 22:23:35] 2025-10-24 20:22:38,545 | INFO     | sum of square deviations: 5449944045.0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,560 | INFO     | sum of deviations: -12080309551.499998
[2025-10-24 22:23:35] 2025-10-24 20:22:38,561 | INFO     | mean x: 1761329316.5
[2025-10-24 22:23:35] 2025-10-24 20:22:38,561 | INFO     | mean y: 2484430.1576923076
[2025-10-24 22:23:35] 2025-10-24 20:22:38,561 | INFO     | -- intersect: 3906635223.223663
[2025-10-24 22:23:35] 2025-10-24 20:22:38,561 | INFO     | intersect: 3906635223.223663
[2025-10-24 22:23:35] 2025-10-24 20:22:38,562 | INFO     | chi2: 0.9081523429808473
[2025-10-24 22:23:35] 2025-10-24 20:22:38,562 | INFO     | current chi2=0.9081523429808473 (change=78.51222303479626 %)
[2025-10-24 22:23:35] 2025-10-24 20:22:38,562 | INFO     | sum of square deviations: 5141528960.0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,565 | INFO     | sum of deviations: -17794653918.0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,565 | INFO     | mean x: 1761329469.0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,565 | INFO     | mean y: 2487206.71372549
[2025-10-24 22:23:35] 2025-10-24 20:22:38,565 | INFO     | -- intersect: 6098387585.816074
[2025-10-24 22:23:35] 2025-10-24 20:22:38,565 | INFO     | intersect: 6098387585.816074
[2025-10-24 22:23:35] 2025-10-24 20:22:38,566 | INFO     | chi2: 0.844470912937354
[2025-10-24 22:23:35] 2025-10-24 20:22:38,566 | INFO     | current chi2=0.844470912937354 (change=7.012196856143153 %)
[2025-10-24 22:23:35] 2025-10-24 20:22:38,566 | INFO     | left removable region: 20
[2025-10-24 22:23:35] 2025-10-24 20:22:38,567 | INFO     | sum of square deviations: 4233158440.0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,568 | INFO     | sum of deviations: 7748367925.0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,569 | INFO     | mean x: 1761329591.0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,569 | INFO     | mean y: 2491021.979079498
[2025-10-24 22:23:35] 2025-10-24 20:22:38,569 | INFO     | -- intersect: -3221444463.0007286
[2025-10-24 22:23:35] 2025-10-24 20:22:38,569 | INFO     | intersect: -3221444463.0007286
[2025-10-24 22:23:35] 2025-10-24 20:22:38,569 | INFO     | chi2: 0.0008066777953278952
[2025-10-24 22:23:35] 2025-10-24 20:22:38,570 | INFO     | -- intersect: -3221444463.0007286
[2025-10-24 22:23:35] 2025-10-24 20:22:38,570 | INFO     | current memory leak: 1.83 B/s (using 239 data points, chi2=0.00)
[2025-10-24 22:23:35] 2025-10-24 20:22:38,570 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-24 22:23:35] 2025-10-24 20:22:38,571 | INFO     | ..............................
[2025-10-24 22:23:35] 2025-10-24 20:22:38,571 | INFO     | . Timing measurements:
[2025-10-24 22:23:35] 2025-10-24 20:22:38,571 | INFO     | . get job = 0 s
[2025-10-24 22:23:35] 2025-10-24 20:22:38,571 | INFO     | . initial setup = 10 s
[2025-10-24 22:23:35] 2025-10-24 20:22:38,571 | INFO     | . payload setup = 132 s
[2025-10-24 22:23:35] 2025-10-24 20:22:38,571 | INFO     | . stage-in = 0 s
[2025-10-24 22:23:35] 2025-10-24 20:22:38,571 | INFO     | . payload execution = 16292 s
[2025-10-24 22:23:35] 2025-10-24 20:22:38,571 | INFO     | . stage-out = 5 s
[2025-10-24 22:23:35] 2025-10-24 20:22:38,571 | INFO     | . log creation = 1 s
[2025-10-24 22:23:35] 2025-10-24 20:22:38,571 | INFO     | ..............................
[2025-10-24 22:23:35] 2025-10-24 20:22:38,738 | INFO     | 
[2025-10-24 22:23:35] 2025-10-24 20:22:38,739 | INFO     | job summary report
[2025-10-24 22:23:35] 2025-10-24 20:22:38,739 | INFO     | --------------------------------------------------
[2025-10-24 22:23:35] 2025-10-24 20:22:38,739 | INFO     | PanDA job id: 6855073355
[2025-10-24 22:23:35] 2025-10-24 20:22:38,739 | INFO     | task id: 46771637
[2025-10-24 22:23:35] 2025-10-24 20:22:38,739 | INFO     | errors: (none)
[2025-10-24 22:23:35] 2025-10-24 20:22:38,739 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-24 22:23:35] 2025-10-24 20:22:38,739 | INFO     | pilot state: finished 
[2025-10-24 22:23:35] 2025-10-24 20:22:38,739 | INFO     | transexitcode: 0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,740 | INFO     | exeerrorcode: 0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,740 | INFO     | exeerrordiag: 
[2025-10-24 22:23:35] 2025-10-24 20:22:38,740 | INFO     | exitcode: 0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,740 | INFO     | exitmsg: OK
[2025-10-24 22:23:35] 2025-10-24 20:22:38,740 | INFO     | cpuconsumptiontime: 61986 s
[2025-10-24 22:23:35] 2025-10-24 20:22:38,740 | INFO     | nevents: 400
[2025-10-24 22:23:35] 2025-10-24 20:22:38,740 | INFO     | neventsw: 0
[2025-10-24 22:23:35] 2025-10-24 20:22:38,740 | INFO     | pid: 4540
[2025-10-24 22:23:35] 2025-10-24 20:22:38,740 | INFO     | pgrp: 4540
[2025-10-24 22:23:35] 2025-10-24 20:22:38,740 | INFO     | corecount: 8
[2025-10-24 22:23:35] 2025-10-24 20:22:38,741 | INFO     | event service: False
[2025-10-24 22:23:35] 2025-10-24 20:22:38,741 | INFO     | sizes: {0: 2348658, 1: 2348913, 12: 2348913, 23: 2348941, 34: 2348969, 44: 2348997, 55: 2349153, 66: 2349181, 77: 2349209, 87: 2349265, 94: 2349555, 98: 2349863, 1
[2025-10-24 22:23:35] 2025-10-24 20:22:38,741 | INFO     | --------------------------------------------------
[2025-10-24 22:23:35] 2025-10-24 20:22:38,741 | INFO     | 
[2025-10-24 22:23:35] 2025-10-24 20:22:38,741 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-10-24 22:23:35] 2025-10-24 20:22:39,126 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,126 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,126 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,126 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,126 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,127 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,127 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,127 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,128 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-24 22:23:35] 2025-10-24 20:22:39,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,128 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-24 22:23:35] 2025-10-24 20:22:39,128 | INFO     | job 6855073355 has completed (purged errors)
[2025-10-24 22:23:35] 2025-10-24 20:22:39,129 | INFO     | overall cleanup function is called
[2025-10-24 22:23:35] 2025-10-24 20:22:40,138 | INFO     | --- collectZombieJob: --- 10, [4540]
[2025-10-24 22:23:35] 2025-10-24 20:22:40,138 | INFO     | zombie collector waiting for pid 4540
[2025-10-24 22:23:35] 2025-10-24 20:22:40,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-24 22:23:35] 2025-10-24 20:22:40,139 | INFO     | collected zombie processes
[2025-10-24 22:23:35] 2025-10-24 20:22:40,139 | INFO     | will attempt to kill all subprocesses of pid=4540
[2025-10-24 22:23:35] 2025-10-24 20:22:40,257 | INFO     | process IDs to be killed: [4540] (in reverse order)
[2025-10-24 22:23:35] 2025-10-24 20:22:41,026 | WARNING  | found no corresponding commands to process id(s)
[2025-10-24 22:23:35] 2025-10-24 20:22:41,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-24 22:23:35] 2025-10-24 20:22:41,029 | INFO     | did not find any defunct processes belonging to 4540
[2025-10-24 22:23:35] 2025-10-24 20:22:41,032 | INFO     | did not find any defunct processes belonging to 4540
[2025-10-24 22:23:35] 2025-10-24 20:22:41,033 | INFO     | ready for new job
[2025-10-24 22:23:35] 2025-10-24 20:22:41,033 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-24 22:23:35] 2025-10-24 20:22:41,035 | INFO     | ***************************************
[2025-10-24 22:23:35] 2025-10-24 20:22:41,035 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-24 22:23:35] 2025-10-24 20:22:41,035 | INFO     | ***************************************
[2025-10-24 22:23:35] 2025-10-24 20:22:41,035 | INFO     | 
[2025-10-24 22:23:35] 2025-10-24 20:22:41,036 | INFO     | pilot is running in a VM
[2025-10-24 22:23:35] 2025-10-24 20:22:41,036 | INFO     | architecture information:
[2025-10-24 22:23:35] 2025-10-24 20:22:41,041 | INFO     | executing command: cat /etc/os-release
[2025-10-24 22:23:35] 2025-10-24 20:22:41,330 | INFO     | cat /etc/os-release:
[2025-10-24 22:23:35] NAME="CentOS Linux"
[2025-10-24 22:23:35] VERSION="7 (Core)"
[2025-10-24 22:23:35] ID="centos"
[2025-10-24 22:23:35] ID_LIKE="rhel fedora"
[2025-10-24 22:23:35] VERSION_ID="7"
[2025-10-24 22:23:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-24 22:23:35] ANSI_COLOR="0;31"
[2025-10-24 22:23:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-24 22:23:35] HOME_URL="https://www.centos.org/"
[2025-10-24 22:23:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-24 22:23:35] 
[2025-10-24 22:23:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-24 22:23:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-24 22:23:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-24 22:23:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-24 22:23:35] 
[2025-10-24 22:23:35] 2025-10-24 20:22:41,330 | INFO     | ***************************************
[2025-10-24 22:23:35] 2025-10-24 20:22:41,833 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-10-24 22:23:35] 2025-10-24 20:22:42,107 | INFO     | sufficient remaining disk space (496448307200 B)
[2025-10-24 22:23:35] 2025-10-24 20:22:42,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-24 22:23:35] 2025-10-24 20:22:42,107 | INFO     | current server update state: UPDATING_FINAL
[2025-10-24 22:23:35] 2025-10-24 20:22:42,108 | INFO     | update_server=False
[2025-10-24 22:23:35] 2025-10-24 20:22:42,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-24 22:23:35] 2025-10-24 20:22:42,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-24 22:23:35] 2025-10-24 20:22:42,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-24 22:23:35] 2025-10-24 20:22:42,109 | INFO     | aborting loop
[2025-10-24 22:23:35] 2025-10-24 20:22:42,306 | INFO     | all payload control threads have been joined
[2025-10-24 22:23:35] 2025-10-24 20:22:43,083 | INFO     | all data control threads have been joined
[2025-10-24 22:23:35] 2025-10-24 20:22:43,113 | INFO     | [job] retrieve thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:43,115 | INFO     | [job] job monitor thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:43,170 | INFO     | [job] create_data_payload thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:43,312 | INFO     | [payload] control thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:43,515 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:43,664 | INFO     | all job control threads have been joined
[2025-10-24 22:23:35] 2025-10-24 20:22:43,753 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-24 22:23:35] 2025-10-24 20:22:43,973 | INFO     | [payload] failed_post thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:44,086 | INFO     | [payload] validate_post thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:44,089 | INFO     | [data] control thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:44,103 | INFO     | [job] validate thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:44,118 | INFO     | [data] copytool_out thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:44,276 | INFO     | [payload] validate_pre thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:44,526 | INFO     | [payload] execute_payloads thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:44,551 | INFO     | [data] copytool_in thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:44,670 | INFO     | [job] control thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:44,759 | INFO     | [job] queue monitor thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:22:45,599 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-24 22:23:35] 2025-10-24 20:22:49,608 | INFO     | [data] queue_monitor thread has finished
[2025-10-24 22:23:35] 2025-10-24 20:23:10,352 | INFO     | PID=30363 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-24 22:23:35] 2025-10-24 20:23:10,352 | INFO     | .. there are 9 such processes running
[2025-10-24 22:23:35] 2025-10-24 20:23:10,353 | INFO     | found 0 job(s) in 20 queues
[2025-10-24 22:23:35] 2025-10-24 20:23:10,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-24 22:23:35] 2025-10-24 20:23:10,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-24 22:23:35] 2025-10-24 20:23:25,789 | INFO     | [monitor] cgroup control has ended
[2025-10-24 22:23:35] 2025-10-24 20:23:27,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677997524800)>', '<ExcThread(monitor, started 140677425919744)>']
[2025-10-24 22:23:35] 2025-10-24 20:23:28,459 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-24 22:23:35] 2025-10-24 20:23:28,459 | INFO     | [monitor] control thread has ended
[2025-10-24 22:23:35] 2025-10-24 20:23:32,703 | INFO     | all workflow threads have been joined
[2025-10-24 22:23:35] 2025-10-24 20:23:32,703 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-24 22:23:35] 2025-10-24 20:23:32,704 | INFO     | traces error code: 0
[2025-10-24 22:23:35] 2025-10-24 20:23:32,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-24 22:23:35] 2025-10-24 20:23:33,002 [wrapper] ==== pilot stdout END ====
[2025-10-24 22:23:35] 2025-10-24 20:23:33,042 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-24 22:23:35] 2025-10-24 20:23:33,087 [wrapper] pilotpid: 30363
[2025-10-24 22:23:35] 2025-10-24 20:23:33,130 [wrapper] Pilot exit status: 0
[2025-10-24 22:23:35] 2025-10-24 20:23:33,555 [wrapper] pandaids: 6855073355
[2025-10-24 22:23:35] 2025-10-24 20:23:34,421 [wrapper] cleanup supervisor_pilot 17146 30364
[2025-10-24 22:23:35] 2025-10-24 20:23:34,426 [wrapper] Test setup, not cleaning
[2025-10-24 22:23:35] 2025-10-24 20:23:34,438 [wrapper] apfmon messages muted
[2025-10-24 22:23:35] 2025-10-24 20:23:34,446 [wrapper] ==== wrapper stdout END ====
[2025-10-24 22:23:35] 2025-10-24 20:23:34,454 [wrapper] ==== wrapper stderr END ====
[2025-10-24 22:23:35]  *** Error codes and diagnostics ***
[2025-10-24 22:23:35]     "exeErrorCode": 0,
[2025-10-24 22:23:35]     "exeErrorDiag": "",
[2025-10-24 22:23:35]     "pilotErrorCode": 0,
[2025-10-24 22:23:35]     "pilotErrorDiag": "",
[2025-10-24 22:23:35]  *** Listing of results directory ***
[2025-10-24 22:23:35] total 438996
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc    557409 Oct 23 21:24 pilot3.tar.gz
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc      5112 Oct 23 21:37 queuedata.json
[2025-10-24 22:23:35] -rwx------. 1 boinc boinc     36292 Oct 23 21:40 runpilot2-wrapper.sh
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc       100 Oct 24 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-24 22:23:35] -rwxr-xr-x. 1 boinc boinc      7986 Oct 24 17:39 run_atlas
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc       105 Oct 24 17:39 job.xml
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc      6390 Oct 24 17:39 init_data.xml
[2025-10-24 22:23:35] -rw-r--r--. 2 boinc boinc 230271069 Oct 24 17:39 EVNT.46771634._004422.pool.root.1
[2025-10-24 22:23:35] -rw-r--r--. 2 boinc boinc     15120 Oct 24 17:39 start_atlas.sh
[2025-10-24 22:23:35] drwxrwx--x. 2 boinc boinc        68 Oct 24 17:39 shared
[2025-10-24 22:23:35] -rw-r--r--. 2 boinc boinc    569684 Oct 24 17:39 input.tar.gz
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc         0 Oct 24 17:39 boinc_lockfile
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc      2561 Oct 24 17:40 pandaJob.out
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc    978655 Oct 24 17:43 agis_schedconf.cvmfs.json
[2025-10-24 22:23:35] drwx------. 5 boinc boinc      4096 Oct 24 17:43 pilot3
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc 209899265 Oct 24 22:19 HITS.46771637._110860.pool.root.1
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc       531 Oct 24 22:20 boinc_task_state.xml
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc      1018 Oct 24 22:20 memory_monitor_summary.json
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc   1560772 Oct 24 22:20 agis_ddmendpoints.agis.ALL.json
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc    502313 Oct 24 22:20 log.46771637._110860.job.log.tgz.1
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc        95 Oct 24 22:22 pilot_heartbeat.json
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc      7787 Oct 24 22:22 heartbeat.json
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc      8192 Oct 24 22:23 boinc_mmap_file
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc        28 Oct 24 22:23 wrapper_checkpoint.txt
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc      4885 Oct 24 22:23 pilotlog.txt
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc   2235698 Oct 24 22:23 log.46771637._110860.job.log.1
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc       357 Oct 24 22:23 output.list
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc       620 Oct 24 22:23 runtime_log
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc   2754560 Oct 24 22:23 result.tar.gz
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc      8717 Oct 24 22:23 runtime_log.err
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc       656 Oct 24 22:23 8vbLDmtLGW8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmib9NDmRt6SMn.diag
[2025-10-24 22:23:35] -rw-r--r--. 1 boinc boinc     20797 Oct 24 22:23 stderr.txt
[2025-10-24 22:23:35] HITS file was successfully produced:
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc 209899265 Oct 24 22:19 shared/HITS.pool.root.1
[2025-10-24 22:23:35]  *** Contents of shared directory: ***
[2025-10-24 22:23:35] total 433124
[2025-10-24 22:23:35] -rw-r--r--. 2 boinc boinc 230271069 Oct 24 17:39 ATLAS.root_0
[2025-10-24 22:23:35] -rw-r--r--. 2 boinc boinc     15120 Oct 24 17:39 start_atlas.sh
[2025-10-24 22:23:35] -rw-r--r--. 2 boinc boinc    569684 Oct 24 17:39 input.tar.gz
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc 209899265 Oct 24 22:19 HITS.pool.root.1
[2025-10-24 22:23:35] -rw-------. 1 boinc boinc   2754560 Oct 24 22:23 result.tar.gz
22:23:36 (26603): run_atlas exited; CPU time 62223.575172
22:23:36 (26603): called boinc_finish(0)

</stderr_txt>
]]>

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